HEADER TRANSFERASE 23-JUN-15 5C6U TITLE RV3722C AMINOTRANSFERASE FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RV3722C PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: RV3722C, LH57_20280; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG81 KEYWDS STRUCTURAL GENOMICS, APC112018, ASPARTATE AMINOTRANSFERASE, AAT KEYWDS 2 SUPERFAMILY, PYRIDOXAL PHOSPHATE, PLP, PSI-BIOLOGY, MIDWEST CENTER KEYWDS 3 FOR STRUCTURAL GENOMICS, MCSG, STRUCTURES OF MTB PROTEINS CONFERRING KEYWDS 4 SUSCEPTIBILITY TO KNOWN MTB INHIBITORS, MTBI, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,C.HATZOS-SKINTGES,R.JEDRZEJCZAK,G.BABNIGG,J.SACCHETTINI, AUTHOR 2 A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG), AUTHOR 3 STRUCTURES OF MTB PROTEINS CONFERRING SUSCEPTIBILITY TO KNOWN MTB AUTHOR 4 INHIBITORS (MTBI) REVDAT 4 25-DEC-19 5C6U 1 REMARK REVDAT 3 24-JAN-18 5C6U 1 JRNL REVDAT 2 27-SEP-17 5C6U 1 SOURCE REMARK REVDAT 1 15-JUL-15 5C6U 0 JRNL AUTH J.OSIPIUK,C.HATZOS-SKINTGES,R.JEDRZEJCZAK,G.BABNIGG, JRNL AUTH 2 J.SACCHETTINI,A.JOACHIMIAK, JRNL AUTH 3 STRUCTURES OF MTB PROTEINS CONFERRING SUSCEPTIBILITY TO JRNL AUTH 4 KNOWN MTB INHIBITORS (MTBI), JRNL AUTH 5 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL RV3722C AMINOTRANSFERASE FROM MYCOBACTERIUM TUBERCULOSIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 38287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2032 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2611 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 139 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3283 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.20000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : 0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.492 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3530 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3403 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4829 ; 1.482 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7846 ; 0.794 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 5.681 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;33.720 ;23.671 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 550 ;13.369 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;15.537 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4061 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 812 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1754 ; 1.095 ; 1.520 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1753 ; 1.086 ; 1.518 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2201 ; 1.686 ; 2.274 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2202 ; 1.687 ; 2.276 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1775 ; 1.835 ; 1.769 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1772 ; 1.837 ; 1.770 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2604 ; 2.980 ; 2.561 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4380 ; 5.320 ;13.783 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4168 ; 5.086 ;13.008 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5244 0.5600 22.2623 REMARK 3 T TENSOR REMARK 3 T11: 0.0027 T22: 0.0087 REMARK 3 T33: 0.0067 T12: 0.0008 REMARK 3 T13: -0.0013 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.2085 L22: 0.1531 REMARK 3 L33: 0.1318 L12: -0.0718 REMARK 3 L13: 0.0717 L23: 0.0238 REMARK 3 S TENSOR REMARK 3 S11: 0.0061 S12: 0.0277 S13: 0.0303 REMARK 3 S21: 0.0106 S22: -0.0052 S23: -0.0258 REMARK 3 S31: 0.0152 S32: 0.0202 S33: -0.0009 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5C6U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210946. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40320 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M SODIUM REMARK 280 PHOSPHATE / CITRIC ACID BUFFER, 10% PEG3000, PH 4.2, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.67050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.39400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.67050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.39400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -10.51754 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 50.08255 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 736 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 918 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 429 REMARK 465 SER A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 198 NH2 ARG A 201 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 4 -128.25 46.85 REMARK 500 ASN A 97 -142.14 -94.15 REMARK 500 LEU A 159 -163.87 -113.40 REMARK 500 HIS A 224 60.20 -102.32 REMARK 500 THR A 259 -92.57 -112.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1019 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1020 DISTANCE = 5.96 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC112018 RELATED DB: TARGETTRACK DBREF 5C6U A 3 430 UNP O69689 O69689_MYCTU 3 430 SEQADV 5C6U MSE A 2 UNP O69689 INITIATING METHIONINE SEQADV 5C6U HIS A 431 UNP O69689 EXPRESSION TAG SEQADV 5C6U HIS A 432 UNP O69689 EXPRESSION TAG SEQADV 5C6U HIS A 433 UNP O69689 EXPRESSION TAG SEQADV 5C6U HIS A 434 UNP O69689 EXPRESSION TAG SEQADV 5C6U HIS A 435 UNP O69689 EXPRESSION TAG SEQADV 5C6U HIS A 436 UNP O69689 EXPRESSION TAG SEQRES 1 A 435 MSE PHE ASP SER LEU SER PRO GLN GLU LEU ALA ALA LEU SEQRES 2 A 435 HIS ALA ARG HIS GLN GLN ASP TYR ALA ALA LEU GLN GLY SEQRES 3 A 435 MSE LYS LEU ALA LEU ASP LEU THR ARG GLY LYS PRO SER SEQRES 4 A 435 ALA GLU GLN LEU ASP LEU SER ASN GLN LEU LEU SER LEU SEQRES 5 A 435 PRO GLY ASP ASP TYR ARG ASP PRO GLU GLY THR ASP THR SEQRES 6 A 435 ARG ASN TYR GLY GLY GLN HIS GLY LEU PRO GLY LEU ARG SEQRES 7 A 435 ALA ILE PHE ALA GLU LEU LEU GLY ILE ALA VAL PRO ASN SEQRES 8 A 435 LEU ILE ALA GLY ASN ASN SER SER LEU GLU LEU MSE HIS SEQRES 9 A 435 ASP ILE VAL ALA PHE SER MSE LEU TYR GLY GLY VAL ASP SEQRES 10 A 435 SER PRO ARG PRO TRP ILE GLN GLU GLN ASP GLY ILE LYS SEQRES 11 A 435 PHE LEU CYS PRO VAL PRO GLY TYR ASP ARG HIS PHE ALA SEQRES 12 A 435 ILE THR GLU THR MSE GLY ILE GLU MSE ILE PRO ILE PRO SEQRES 13 A 435 MSE LEU GLN ASP GLY PRO ASP VAL ASP LEU ILE GLU GLU SEQRES 14 A 435 LEU VAL ALA VAL ASP PRO ALA ILE LYS GLY MSE TRP THR SEQRES 15 A 435 VAL PRO VAL PHE GLY ASN PRO SER GLY VAL THR TYR SER SEQRES 16 A 435 TRP GLU THR VAL ARG ARG LEU VAL GLN MSE ARG THR ALA SEQRES 17 A 435 ALA PRO ASP PHE ARG LEU PHE TRP ASP ASN ALA TYR ALA SEQRES 18 A 435 VAL HIS THR LEU THR LEU ASP PHE PRO ARG GLN VAL ASP SEQRES 19 A 435 VAL LEU GLY LEU ALA ALA LYS ALA GLY ASN PRO ASN ARG SEQRES 20 A 435 PRO TYR VAL PHE ALA SER THR SER LYS ILE THR PHE ALA SEQRES 21 A 435 GLY GLY GLY VAL SER PHE PHE GLY GLY SER LEU GLY ASN SEQRES 22 A 435 ILE ALA TRP TYR LEU GLN TYR ALA GLY LYS LYS SER ILE SEQRES 23 A 435 GLY PRO ASP LYS VAL ASN GLN LEU ARG HIS LEU ARG PHE SEQRES 24 A 435 PHE GLY ASP ALA ASP GLY VAL ARG LEU HIS MSE LEU ARG SEQRES 25 A 435 HIS GLN GLN ILE LEU ALA PRO LYS PHE ALA LEU VAL ALA SEQRES 26 A 435 GLU VAL LEU ASP GLN ARG LEU SER GLU SER LYS ILE ALA SEQRES 27 A 435 SER TRP THR GLU PRO LYS GLY GLY TYR PHE ILE SER LEU SEQRES 28 A 435 ASP VAL LEU PRO GLY THR ALA ARG ARG THR VAL ALA LEU SEQRES 29 A 435 ALA LYS ASP VAL GLY ILE ALA VAL THR GLU ALA GLY ALA SEQRES 30 A 435 SER PHE PRO TYR ARG LYS ASP PRO ASP ASP LYS ASN ILE SEQRES 31 A 435 ARG ILE ALA PRO SER PHE PRO SER VAL PRO ASP LEU ARG SEQRES 32 A 435 ASN ALA VAL ASP GLY LEU ALA THR CYS ALA LEU LEU ALA SEQRES 33 A 435 ALA THR GLU THR LEU LEU ASN GLN GLY LEU ALA SER SER SEQRES 34 A 435 HIS HIS HIS HIS HIS HIS MODRES 5C6U MSE A 28 MET MODIFIED RESIDUE MODRES 5C6U MSE A 104 MET MODIFIED RESIDUE MODRES 5C6U MSE A 112 MET MODIFIED RESIDUE MODRES 5C6U MSE A 149 MET MODIFIED RESIDUE MODRES 5C6U MSE A 153 MET MODIFIED RESIDUE MODRES 5C6U MSE A 158 MET MODIFIED RESIDUE MODRES 5C6U MSE A 181 MET MODIFIED RESIDUE MODRES 5C6U MSE A 206 MET MODIFIED RESIDUE MODRES 5C6U MSE A 311 MET MODIFIED RESIDUE HET MSE A 2 8 HET MSE A 28 13 HET MSE A 104 8 HET MSE A 112 8 HET MSE A 149 8 HET MSE A 153 8 HET MSE A 158 8 HET MSE A 181 8 HET MSE A 206 8 HET MSE A 311 8 HET PLP A 501 16 HET PO4 A 502 5 HET CL A 503 1 HETNAM MSE SELENOMETHIONINE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM PO4 PHOSPHATE ION HETNAM CL CHLORIDE ION HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 PO4 O4 P 3- FORMUL 4 CL CL 1- FORMUL 5 HOH *420(H2 O) HELIX 1 AA1 SER A 7 MSE A 28 1 22 HELIX 2 AA2 SER A 40 LEU A 46 1 7 HELIX 3 AA3 SER A 47 LEU A 53 5 7 HELIX 4 AA4 LEU A 75 GLY A 87 1 13 HELIX 5 AA5 ALA A 89 PRO A 91 5 3 HELIX 6 AA6 SER A 99 GLY A 115 1 17 HELIX 7 AA7 PRO A 122 GLU A 126 5 5 HELIX 8 AA8 TYR A 139 MSE A 149 1 11 HELIX 9 AA9 ASP A 164 ASP A 175 1 12 HELIX 10 AB1 SER A 196 MSE A 206 1 11 HELIX 11 AB2 ASP A 235 ALA A 243 1 9 HELIX 12 AB3 SER A 271 SER A 286 1 16 HELIX 13 AB4 ASP A 290 GLY A 302 1 13 HELIX 14 AB5 ASP A 303 SER A 334 1 32 HELIX 15 AB6 THR A 358 ASP A 368 1 11 HELIX 16 AB7 PHE A 380 LYS A 384 5 5 HELIX 17 AB8 SER A 399 GLN A 425 1 27 SHEET 1 AA1 2 LEU A 32 ASP A 33 0 SHEET 2 AA1 2 ILE A 371 ALA A 372 1 O ALA A 372 N LEU A 32 SHEET 1 AA2 8 LEU A 93 ALA A 95 0 SHEET 2 AA2 8 SER A 266 GLY A 269 -1 O PHE A 268 N ILE A 94 SHEET 3 AA2 8 PRO A 249 SER A 254 -1 N VAL A 251 O GLY A 269 SHEET 4 AA2 8 ARG A 214 ASP A 218 1 N TRP A 217 O TYR A 250 SHEET 5 AA2 8 ILE A 178 THR A 183 1 N MSE A 181 O PHE A 216 SHEET 6 AA2 8 LYS A 131 VAL A 136 1 N LEU A 133 O GLY A 180 SHEET 7 AA2 8 GLU A 152 LEU A 159 1 O ILE A 154 N CYS A 134 SHEET 8 AA2 8 GLY A 162 PRO A 163 -1 O GLY A 162 N LEU A 159 SHEET 1 AA3 3 SER A 340 TRP A 341 0 SHEET 2 AA3 3 ILE A 350 ASP A 353 -1 O ASP A 353 N SER A 340 SHEET 3 AA3 3 ASN A 390 ILE A 393 -1 O ILE A 391 N LEU A 352 LINK C MSE A 2 N PHE A 3 1555 1555 1.33 LINK C GLY A 27 N MSE A 28 1555 1555 1.33 LINK C MSE A 28 N LYS A 29 1555 1555 1.34 LINK C LEU A 103 N MSE A 104 1555 1555 1.34 LINK C MSE A 104 N HIS A 105 1555 1555 1.33 LINK C SER A 111 N MSE A 112 1555 1555 1.34 LINK C MSE A 112 N LEU A 113 1555 1555 1.33 LINK C THR A 148 N MSE A 149 1555 1555 1.33 LINK C MSE A 149 N GLY A 150 1555 1555 1.32 LINK C GLU A 152 N MSE A 153 1555 1555 1.33 LINK C MSE A 153 N ILE A 154 1555 1555 1.32 LINK C PRO A 157 N MSE A 158 1555 1555 1.33 LINK C MSE A 158 N LEU A 159 1555 1555 1.33 LINK C GLY A 180 N MSE A 181 1555 1555 1.33 LINK C MSE A 181 N TRP A 182 1555 1555 1.33 LINK C GLN A 205 N MSE A 206 1555 1555 1.33 LINK C MSE A 206 N ARG A 207 1555 1555 1.34 LINK C HIS A 310 N MSE A 311 1555 1555 1.32 LINK C MSE A 311 N LEU A 312 1555 1555 1.33 CISPEP 1 LEU A 53 PRO A 54 0 5.23 CISPEP 2 VAL A 136 PRO A 137 0 -5.52 CISPEP 3 ASN A 189 PRO A 190 0 6.81 SITE 1 AC1 21 TYR A 69 SER A 99 SER A 100 LEU A 101 SITE 2 AC1 21 TYR A 139 VAL A 184 ASN A 189 ASP A 218 SITE 3 AC1 21 ALA A 220 TYR A 221 SER A 254 SER A 256 SITE 4 AC1 21 LYS A 257 PO4 A 502 HOH A 605 HOH A 644 SITE 5 AC1 21 HOH A 648 HOH A 715 HOH A 734 HOH A 791 SITE 6 AC1 21 HOH A 954 SITE 1 AC2 10 TYR A 69 SER A 99 SER A 100 LEU A 101 SITE 2 AC2 10 SER A 254 SER A 256 PLP A 501 HOH A 644 SITE 3 AC2 10 HOH A 648 HOH A 715 SITE 1 AC3 3 TYR A 139 HIS A 142 HOH A 757 CRYST1 143.341 64.788 51.175 90.00 101.86 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006976 0.000000 0.001465 0.00000 SCALE2 0.000000 0.015435 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019967 0.00000 HETATM 1 N MSE A 2 44.536 -5.388 29.993 1.00 38.21 N ANISOU 1 N MSE A 2 4542 4928 5045 184 -229 -138 N HETATM 2 CA MSE A 2 43.890 -5.271 31.339 1.00 34.16 C ANISOU 2 CA MSE A 2 4058 4395 4526 182 -248 -144 C HETATM 3 C MSE A 2 44.918 -4.862 32.358 1.00 30.76 C ANISOU 3 C MSE A 2 3613 3958 4114 186 -271 -157 C HETATM 4 O MSE A 2 45.842 -5.639 32.696 1.00 29.76 O ANISOU 4 O MSE A 2 3482 3835 3988 203 -286 -170 O HETATM 5 CB MSE A 2 43.281 -6.588 31.739 1.00 36.38 C ANISOU 5 CB MSE A 2 4373 4669 4779 197 -256 -149 C HETATM 6 CG MSE A 2 42.698 -6.427 33.133 1.00 36.91 C ANISOU 6 CG MSE A 2 4466 4717 4838 195 -274 -154 C HETATM 7 SE MSE A 2 41.789 -8.120 33.527 0.65 39.85 SE ANISOU 7 SE MSE A 2 4883 5080 5177 211 -280 -156 SE HETATM 8 CE MSE A 2 43.219 -9.396 33.802 1.00 31.82 C ANISOU 8 CE MSE A 2 3861 4068 4162 238 -302 -174 C