HEADER OXIDOREDUCTASE 24-JUN-15 5C7O TITLE STRUCTURE OF HUMAN TESTIS-SPECIFIC GLYCERALDEHYDE-3-PHOSPHATE TITLE 2 DEHYDROGENASE HOLO FORM WITH NAD+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, TESTIS-SPECIFIC; COMPND 3 CHAIN: O, P; COMPND 4 FRAGMENT: UNP RESIDUES 74-407; COMPND 5 SYNONYM: SPERMATOGENIC CELL-SPECIFIC GLYCERALDEHYDE 3-PHOSPHATE COMPND 6 DEHYDROGENASE 2,GAPDH-2,SPERMATOGENIC GLYCERALDEHYDE-3-PHOSPHATE COMPND 7 DEHYDROGENASE; COMPND 8 EC: 1.2.1.12; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GAPDHS, GAPD2, GAPDH2, GAPDS, HSD-35, HSD35; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN SPERM GAPDH METABOLIC ENZYME SPERM SPECIFIC WITH NAD+ COFACTOR, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.BETTS,M.MACHIUS,P.DANSHINA,D.O'BRIEN REVDAT 4 15-NOV-23 5C7O 1 REMARK REVDAT 3 27-SEP-23 5C7O 1 REMARK REVDAT 2 08-JUN-16 5C7O 1 JRNL REVDAT 1 09-MAR-16 5C7O 0 JRNL AUTH P.V.DANSHINA,W.QU,B.R.TEMPLE,R.J.ROJAS,M.J.MILEY,M.MACHIUS, JRNL AUTH 2 L.BETTS,D.A.O'BRIEN JRNL TITL STRUCTURAL ANALYSES TO IDENTIFY SELECTIVE INHIBITORS OF JRNL TITL 2 GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE-S, A SPERM-SPECIFIC JRNL TITL 3 GLYCOLYTIC ENZYME. JRNL REF MOL. HUM. REPROD. V. 22 410 2016 JRNL REFN ISSN 1460-2407 JRNL PMID 26921398 JRNL DOI 10.1093/MOLEHR/GAW016 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 68115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7108 - 4.1637 1.00 5149 160 0.1227 0.1602 REMARK 3 2 4.1637 - 3.3060 1.00 5070 154 0.1203 0.1414 REMARK 3 3 3.3060 - 2.8884 1.00 5015 148 0.1372 0.1677 REMARK 3 4 2.8884 - 2.6244 1.00 5046 151 0.1369 0.1550 REMARK 3 5 2.6244 - 2.4364 1.00 5034 150 0.1376 0.1648 REMARK 3 6 2.4364 - 2.2928 1.00 4999 149 0.1337 0.1661 REMARK 3 7 2.2928 - 2.1780 1.00 5011 154 0.1349 0.1648 REMARK 3 8 2.1780 - 2.0832 1.00 5024 155 0.1430 0.1855 REMARK 3 9 2.0832 - 2.0030 1.00 4982 151 0.1482 0.1814 REMARK 3 10 2.0030 - 1.9339 1.00 4999 151 0.1596 0.1974 REMARK 3 11 1.9339 - 1.8735 0.97 4862 159 0.1711 0.1970 REMARK 3 12 1.8735 - 1.8199 0.91 4553 136 0.1816 0.1873 REMARK 3 13 1.8199 - 1.7720 0.78 3843 118 0.1945 0.2390 REMARK 3 14 1.7720 - 1.7288 0.50 2515 77 0.1894 0.2118 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5455 REMARK 3 ANGLE : 1.026 7452 REMARK 3 CHIRALITY : 0.039 833 REMARK 3 PLANARITY : 0.006 957 REMARK 3 DIHEDRAL : 13.807 2002 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000211183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0746 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68115 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 31.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3H9E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 MIXTURE OF PROTEIN:NAD+ COMPLEX AT REMARK 280 10 MG/ML WITH 0.2 M SODIUM NITRATE, 20% PEG3350, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.22100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.87050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.22100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.87050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -182.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -44.04263 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 67.79380 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NE2 HIS O 275 LIES ON A SPECIAL POSITION. REMARK 375 NE2 HIS P 275 LIES ON A SPECIAL POSITION. REMARK 375 HOH O 919 LIES ON A SPECIAL POSITION. REMARK 375 HOH P 890 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG O 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS O 408 CG CD CE NZ REMARK 470 ARG P 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS P 408 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS P 97 O HOH P 604 1.48 REMARK 500 O HOH O 629 O HOH O 782 1.84 REMARK 500 O HOH P 817 O HOH P 854 1.91 REMARK 500 N ARG P 74 O HOH P 601 2.00 REMARK 500 O HOH O 730 O HOH O 893 2.03 REMARK 500 O HOH O 794 O HOH O 883 2.05 REMARK 500 OE1 GLU O 332 O HOH O 601 2.08 REMARK 500 O GLY O 162 O HOH O 602 2.09 REMARK 500 OD1 ASN P 217 O HOH P 602 2.10 REMARK 500 O HOH P 799 O HOH P 854 2.11 REMARK 500 O HOH P 659 O HOH P 774 2.12 REMARK 500 O4 SO4 P 502 O HOH P 603 2.13 REMARK 500 O ASP O 407 O HOH O 603 2.19 REMARK 500 NZ LYS P 97 O HOH P 604 2.19 REMARK 500 O HOH O 864 O HOH O 890 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH O 821 O HOH P 832 2556 1.98 REMARK 500 O HOH O 884 O HOH P 653 2556 2.08 REMARK 500 O HOH O 850 O HOH P 792 2556 2.16 REMARK 500 O HOH O 806 O HOH P 832 2556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE O 83 56.60 -98.04 REMARK 500 ASP O 106 114.65 -161.32 REMARK 500 SER O 193 46.57 -85.48 REMARK 500 ASP O 198 -14.67 -144.16 REMARK 500 ASN O 207 24.88 -146.32 REMARK 500 ALA O 222 -158.58 61.17 REMARK 500 ASP O 261 109.13 -43.33 REMARK 500 ALA O 267 91.00 -162.27 REMARK 500 VAL O 312 132.63 85.18 REMARK 500 PHE P 83 53.66 -100.88 REMARK 500 ASP P 106 111.06 -162.69 REMARK 500 ARG P 134 148.35 -171.68 REMARK 500 SER P 163 63.37 36.84 REMARK 500 SER P 193 45.72 -88.10 REMARK 500 VAL P 206 -51.51 -124.89 REMARK 500 ASN P 207 24.88 -146.16 REMARK 500 ALA P 222 -155.46 60.53 REMARK 500 SER P 264 71.29 -151.15 REMARK 500 ALA P 267 92.12 -160.22 REMARK 500 VAL P 312 132.49 84.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN O 149 -12.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD O 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 O 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD P 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 P 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5C7L RELATED DB: PDB DBREF 5C7O O 74 407 UNP O14556 G3PT_HUMAN 74 407 DBREF 5C7O P 74 407 UNP O14556 G3PT_HUMAN 74 407 SEQADV 5C7O LYS O 408 UNP O14556 EXPRESSION TAG SEQADV 5C7O LYS P 408 UNP O14556 EXPRESSION TAG SEQRES 1 O 335 ARG GLU LEU THR VAL GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 O 335 GLY ARG LEU VAL LEU ARG ALA CYS MET GLU LYS GLY VAL SEQRES 3 O 335 LYS VAL VAL ALA VAL ASN ASP PRO PHE ILE ASP PRO GLU SEQRES 4 O 335 TYR MET VAL TYR MET PHE LYS TYR ASP SER THR HIS GLY SEQRES 5 O 335 ARG TYR LYS GLY SER VAL GLU PHE ARG ASN GLY GLN LEU SEQRES 6 O 335 VAL VAL ASP ASN HIS GLU ILE SER VAL TYR GLN CYS LYS SEQRES 7 O 335 GLU PRO LYS GLN ILE PRO TRP ARG ALA VAL GLY SER PRO SEQRES 8 O 335 TYR VAL VAL GLU SER THR GLY VAL TYR LEU SER ILE GLN SEQRES 9 O 335 ALA ALA SER ASP HIS ILE SER ALA GLY ALA GLN ARG VAL SEQRES 10 O 335 VAL ILE SER ALA PRO SER PRO ASP ALA PRO MET PHE VAL SEQRES 11 O 335 MET GLY VAL ASN GLU ASN ASP TYR ASN PRO GLY SER MET SEQRES 12 O 335 ASN ILE VAL SER ASN ALA SER OCS THR THR ASN CYS LEU SEQRES 13 O 335 ALA PRO LEU ALA LYS VAL ILE HIS GLU ARG PHE GLY ILE SEQRES 14 O 335 VAL GLU GLY LEU MET THR THR VAL HIS SER TYR THR ALA SEQRES 15 O 335 THR GLN LYS THR VAL ASP GLY PRO SER ARG LYS ALA TRP SEQRES 16 O 335 ARG ASP GLY ARG GLY ALA HIS GLN ASN ILE ILE PRO ALA SEQRES 17 O 335 SER THR GLY ALA ALA LYS ALA VAL THR LYS VAL ILE PRO SEQRES 18 O 335 GLU LEU LYS GLY LYS LEU THR GLY MET ALA PHE ARG VAL SEQRES 19 O 335 PRO THR PRO ASP VAL SER VAL VAL ASP LEU THR CYS ARG SEQRES 20 O 335 LEU ALA GLN PRO ALA PRO TYR SER ALA ILE LYS GLU ALA SEQRES 21 O 335 VAL LYS ALA ALA ALA LYS GLY PRO MET ALA GLY ILE LEU SEQRES 22 O 335 ALA TYR THR GLU ASP GLU VAL VAL SER THR ASP PHE LEU SEQRES 23 O 335 GLY ASP THR HIS SER SER ILE PHE ASP ALA LYS ALA GLY SEQRES 24 O 335 ILE ALA LEU ASN ASP ASN PHE VAL LYS LEU ILE SER TRP SEQRES 25 O 335 TYR ASP ASN GLU TYR GLY TYR SER HIS ARG VAL VAL ASP SEQRES 26 O 335 LEU LEU ARG TYR MET PHE SER ARG ASP LYS SEQRES 1 P 335 ARG GLU LEU THR VAL GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 P 335 GLY ARG LEU VAL LEU ARG ALA CYS MET GLU LYS GLY VAL SEQRES 3 P 335 LYS VAL VAL ALA VAL ASN ASP PRO PHE ILE ASP PRO GLU SEQRES 4 P 335 TYR MET VAL TYR MET PHE LYS TYR ASP SER THR HIS GLY SEQRES 5 P 335 ARG TYR LYS GLY SER VAL GLU PHE ARG ASN GLY GLN LEU SEQRES 6 P 335 VAL VAL ASP ASN HIS GLU ILE SER VAL TYR GLN CYS LYS SEQRES 7 P 335 GLU PRO LYS GLN ILE PRO TRP ARG ALA VAL GLY SER PRO SEQRES 8 P 335 TYR VAL VAL GLU SER THR GLY VAL TYR LEU SER ILE GLN SEQRES 9 P 335 ALA ALA SER ASP HIS ILE SER ALA GLY ALA GLN ARG VAL SEQRES 10 P 335 VAL ILE SER ALA PRO SER PRO ASP ALA PRO MET PHE VAL SEQRES 11 P 335 MET GLY VAL ASN GLU ASN ASP TYR ASN PRO GLY SER MET SEQRES 12 P 335 ASN ILE VAL SER ASN ALA SER OCS THR THR ASN CYS LEU SEQRES 13 P 335 ALA PRO LEU ALA LYS VAL ILE HIS GLU ARG PHE GLY ILE SEQRES 14 P 335 VAL GLU GLY LEU MET THR THR VAL HIS SER TYR THR ALA SEQRES 15 P 335 THR GLN LYS THR VAL ASP GLY PRO SER ARG LYS ALA TRP SEQRES 16 P 335 ARG ASP GLY ARG GLY ALA HIS GLN ASN ILE ILE PRO ALA SEQRES 17 P 335 SER THR GLY ALA ALA LYS ALA VAL THR LYS VAL ILE PRO SEQRES 18 P 335 GLU LEU LYS GLY LYS LEU THR GLY MET ALA PHE ARG VAL SEQRES 19 P 335 PRO THR PRO ASP VAL SER VAL VAL ASP LEU THR CYS ARG SEQRES 20 P 335 LEU ALA GLN PRO ALA PRO TYR SER ALA ILE LYS GLU ALA SEQRES 21 P 335 VAL LYS ALA ALA ALA LYS GLY PRO MET ALA GLY ILE LEU SEQRES 22 P 335 ALA TYR THR GLU ASP GLU VAL VAL SER THR ASP PHE LEU SEQRES 23 P 335 GLY ASP THR HIS SER SER ILE PHE ASP ALA LYS ALA GLY SEQRES 24 P 335 ILE ALA LEU ASN ASP ASN PHE VAL LYS LEU ILE SER TRP SEQRES 25 P 335 TYR ASP ASN GLU TYR GLY TYR SER HIS ARG VAL VAL ASP SEQRES 26 P 335 LEU LEU ARG TYR MET PHE SER ARG ASP LYS MODRES 5C7O OCS O 224 CYS MODIFIED RESIDUE MODRES 5C7O OCS P 224 CYS MODIFIED RESIDUE HET OCS O 224 11 HET OCS P 224 11 HET NAD O 501 70 HET SO4 O 502 5 HET NAD P 501 70 HET SO4 P 502 5 HETNAM OCS CYSTEINESULFONIC ACID HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM SO4 SULFATE ION FORMUL 1 OCS 2(C3 H7 N O5 S) FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *629(H2 O) HELIX 1 AA1 GLY O 84 GLY O 98 1 15 HELIX 2 AA2 ASP O 110 TYR O 120 1 11 HELIX 3 AA3 GLU O 152 ILE O 156 5 5 HELIX 4 AA4 PRO O 157 GLY O 162 5 6 HELIX 5 AA5 SER O 175 ALA O 185 1 11 HELIX 6 AA6 ASN O 207 TYR O 211 5 5 HELIX 7 AA7 SER O 223 GLY O 241 1 19 HELIX 8 AA8 ALA O 267 ARG O 272 5 6 HELIX 9 AA9 GLY O 284 ILE O 293 1 10 HELIX 10 AB1 PRO O 294 LYS O 297 5 4 HELIX 11 AB2 PRO O 326 GLY O 340 1 15 HELIX 12 AB3 VAL O 354 LEU O 359 5 6 HELIX 13 AB4 GLU O 389 ASP O 407 1 19 HELIX 14 AB5 GLY P 84 GLY P 98 1 15 HELIX 15 AB6 ASP P 110 TYR P 120 1 11 HELIX 16 AB7 GLU P 152 ILE P 156 5 5 HELIX 17 AB8 PRO P 157 GLY P 162 5 6 HELIX 18 AB9 SER P 175 SER P 180 1 6 HELIX 19 AC1 SER P 180 ALA P 185 1 6 HELIX 20 AC2 ASN P 207 TYR P 211 5 5 HELIX 21 AC3 SER P 223 GLY P 241 1 19 HELIX 22 AC4 ALA P 267 ARG P 272 5 6 HELIX 23 AC5 GLY P 284 ILE P 293 1 10 HELIX 24 AC6 PRO P 294 LYS P 297 5 4 HELIX 25 AC7 PRO P 326 GLY P 340 1 15 HELIX 26 AC8 VAL P 354 LEU P 359 5 6 HELIX 27 AC9 GLU P 389 ASP P 407 1 19 SHEET 1 AA1 8 VAL O 131 ARG O 134 0 SHEET 2 AA1 8 GLN O 137 VAL O 140 -1 O VAL O 139 N GLU O 132 SHEET 3 AA1 8 HIS O 143 TYR O 148 -1 O ILE O 145 N LEU O 138 SHEET 4 AA1 8 LYS O 100 ASN O 105 1 N VAL O 104 O TYR O 148 SHEET 5 AA1 8 THR O 77 ASN O 81 1 N ILE O 80 O ASN O 105 SHEET 6 AA1 8 TYR O 165 GLU O 168 1 O VAL O 167 N GLY O 79 SHEET 7 AA1 8 ARG O 189 ILE O 192 1 O VAL O 191 N VAL O 166 SHEET 8 AA1 8 ILE O 218 SER O 220 1 O VAL O 219 N ILE O 192 SHEET 1 AA2 7 ILE O 279 SER O 282 0 SHEET 2 AA2 7 LEU O 300 VAL O 307 -1 O ARG O 306 N ILE O 279 SHEET 3 AA2 7 ILE O 242 SER O 252 1 N HIS O 251 O PHE O 305 SHEET 4 AA2 7 SER O 313 LEU O 321 -1 O ARG O 320 N GLU O 244 SHEET 5 AA2 7 PHE O 379 TYR O 386 -1 O SER O 384 N VAL O 315 SHEET 6 AA2 7 SER O 365 ASP O 368 -1 N ASP O 368 O ILE O 383 SHEET 7 AA2 7 LEU O 346 THR O 349 1 N ALA O 347 O SER O 365 SHEET 1 AA3 6 ILE O 279 SER O 282 0 SHEET 2 AA3 6 LEU O 300 VAL O 307 -1 O ARG O 306 N ILE O 279 SHEET 3 AA3 6 ILE O 242 SER O 252 1 N HIS O 251 O PHE O 305 SHEET 4 AA3 6 SER O 313 LEU O 321 -1 O ARG O 320 N GLU O 244 SHEET 5 AA3 6 PHE O 379 TYR O 386 -1 O SER O 384 N VAL O 315 SHEET 6 AA3 6 ILE O 373 ASN O 376 -1 N ILE O 373 O LYS O 381 SHEET 1 AA4 8 VAL P 131 ARG P 134 0 SHEET 2 AA4 8 GLN P 137 VAL P 140 -1 O VAL P 139 N GLU P 132 SHEET 3 AA4 8 HIS P 143 TYR P 148 -1 O ILE P 145 N LEU P 138 SHEET 4 AA4 8 LYS P 100 ASN P 105 1 N VAL P 104 O TYR P 148 SHEET 5 AA4 8 THR P 77 ASN P 81 1 N ILE P 80 O ASN P 105 SHEET 6 AA4 8 TYR P 165 GLU P 168 1 O TYR P 165 N THR P 77 SHEET 7 AA4 8 ARG P 189 ILE P 192 1 O VAL P 191 N VAL P 166 SHEET 8 AA4 8 ILE P 218 SER P 220 1 O VAL P 219 N ILE P 192 SHEET 1 AA5 7 ILE P 279 SER P 282 0 SHEET 2 AA5 7 LEU P 300 VAL P 307 -1 O ARG P 306 N ILE P 279 SHEET 3 AA5 7 ILE P 242 SER P 252 1 N HIS P 251 O PHE P 305 SHEET 4 AA5 7 SER P 313 LEU P 321 -1 O ARG P 320 N GLU P 244 SHEET 5 AA5 7 PHE P 379 TYR P 386 -1 O SER P 384 N VAL P 315 SHEET 6 AA5 7 SER P 365 ASP P 368 -1 N ASP P 368 O ILE P 383 SHEET 7 AA5 7 LEU P 346 THR P 349 1 N ALA P 347 O SER P 365 SHEET 1 AA6 6 ILE P 279 SER P 282 0 SHEET 2 AA6 6 LEU P 300 VAL P 307 -1 O ARG P 306 N ILE P 279 SHEET 3 AA6 6 ILE P 242 SER P 252 1 N HIS P 251 O PHE P 305 SHEET 4 AA6 6 SER P 313 LEU P 321 -1 O ARG P 320 N GLU P 244 SHEET 5 AA6 6 PHE P 379 TYR P 386 -1 O SER P 384 N VAL P 315 SHEET 6 AA6 6 ILE P 373 ASN P 376 -1 N ILE P 373 O LYS P 381 LINK C SER O 223 N OCS O 224 1555 1555 1.33 LINK C OCS O 224 N THR O 225 1555 1555 1.33 LINK C SER P 223 N OCS P 224 1555 1555 1.33 LINK C OCS P 224 N THR P 225 1555 1555 1.33 SITE 1 AC1 33 ASN O 81 GLY O 82 PHE O 83 GLY O 84 SITE 2 AC1 33 ARG O 85 ILE O 86 ASP O 106 PRO O 107 SITE 3 AC1 33 PHE O 108 LYS O 151 SER O 169 THR O 170 SITE 4 AC1 33 GLY O 171 TYR O 173 SER O 193 ALA O 194 SITE 5 AC1 33 OCS O 224 ALA O 255 ASN O 388 TYR O 392 SITE 6 AC1 33 SO4 O 502 HOH O 611 HOH O 651 HOH O 666 SITE 7 AC1 33 HOH O 685 HOH O 697 HOH O 737 HOH O 743 SITE 8 AC1 33 HOH O 768 HOH O 771 HOH O 772 HOH O 778 SITE 9 AC1 33 HOH O 785 SITE 1 AC2 7 THR O 254 THR O 256 ARG O 306 NAD O 501 SITE 2 AC2 7 HOH O 611 HOH O 625 HOH O 685 SITE 1 AC3 33 ASN P 81 GLY P 82 PHE P 83 GLY P 84 SITE 2 AC3 33 ARG P 85 ILE P 86 ASP P 106 PRO P 107 SITE 3 AC3 33 PHE P 108 LYS P 151 SER P 169 THR P 170 SITE 4 AC3 33 GLY P 171 TYR P 173 SER P 193 ALA P 194 SITE 5 AC3 33 OCS P 224 ALA P 255 ASN P 388 TYR P 392 SITE 6 AC3 33 SO4 P 502 HOH P 603 HOH P 631 HOH P 638 SITE 7 AC3 33 HOH P 657 HOH P 671 HOH P 677 HOH P 710 SITE 8 AC3 33 HOH P 720 HOH P 730 HOH P 767 HOH P 775 SITE 9 AC3 33 HOH P 783 SITE 1 AC4 8 THR P 254 THR P 256 ARG P 306 NAD P 501 SITE 2 AC4 8 HOH P 603 HOH P 654 HOH P 678 HOH P 775 CRYST1 144.442 71.741 80.844 90.00 123.01 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006923 0.000000 0.004498 0.00000 SCALE2 0.000000 0.013939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014751 0.00000