HEADER OXIDOREDUCTASE 24-JUN-15 5C7O TITLE STRUCTURE OF HUMAN TESTIS-SPECIFIC GLYCERALDEHYDE-3-PHOSPHATE TITLE 2 DEHYDROGENASE HOLO FORM WITH NAD+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, TESTIS-SPECIFIC; COMPND 3 CHAIN: O, P; COMPND 4 FRAGMENT: UNP RESIDUES 74-407; COMPND 5 SYNONYM: SPERMATOGENIC CELL-SPECIFIC GLYCERALDEHYDE 3-PHOSPHATE COMPND 6 DEHYDROGENASE 2,GAPDH-2,SPERMATOGENIC GLYCERALDEHYDE-3-PHOSPHATE COMPND 7 DEHYDROGENASE; COMPND 8 EC: 1.2.1.12; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GAPDHS, GAPD2, GAPDH2, GAPDS, HSD-35, HSD35; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN SPERM GAPDH METABOLIC ENZYME SPERM SPECIFIC WITH NAD+ COFACTOR, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.BETTS,M.MACHIUS,P.DANSHINA,D.O'BRIEN REVDAT 4 15-NOV-23 5C7O 1 REMARK REVDAT 3 27-SEP-23 5C7O 1 REMARK REVDAT 2 08-JUN-16 5C7O 1 JRNL REVDAT 1 09-MAR-16 5C7O 0 JRNL AUTH P.V.DANSHINA,W.QU,B.R.TEMPLE,R.J.ROJAS,M.J.MILEY,M.MACHIUS, JRNL AUTH 2 L.BETTS,D.A.O'BRIEN JRNL TITL STRUCTURAL ANALYSES TO IDENTIFY SELECTIVE INHIBITORS OF JRNL TITL 2 GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE-S, A SPERM-SPECIFIC JRNL TITL 3 GLYCOLYTIC ENZYME. JRNL REF MOL. HUM. REPROD. V. 22 410 2016 JRNL REFN ISSN 1460-2407 JRNL PMID 26921398 JRNL DOI 10.1093/MOLEHR/GAW016 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 68115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7108 - 4.1637 1.00 5149 160 0.1227 0.1602 REMARK 3 2 4.1637 - 3.3060 1.00 5070 154 0.1203 0.1414 REMARK 3 3 3.3060 - 2.8884 1.00 5015 148 0.1372 0.1677 REMARK 3 4 2.8884 - 2.6244 1.00 5046 151 0.1369 0.1550 REMARK 3 5 2.6244 - 2.4364 1.00 5034 150 0.1376 0.1648 REMARK 3 6 2.4364 - 2.2928 1.00 4999 149 0.1337 0.1661 REMARK 3 7 2.2928 - 2.1780 1.00 5011 154 0.1349 0.1648 REMARK 3 8 2.1780 - 2.0832 1.00 5024 155 0.1430 0.1855 REMARK 3 9 2.0832 - 2.0030 1.00 4982 151 0.1482 0.1814 REMARK 3 10 2.0030 - 1.9339 1.00 4999 151 0.1596 0.1974 REMARK 3 11 1.9339 - 1.8735 0.97 4862 159 0.1711 0.1970 REMARK 3 12 1.8735 - 1.8199 0.91 4553 136 0.1816 0.1873 REMARK 3 13 1.8199 - 1.7720 0.78 3843 118 0.1945 0.2390 REMARK 3 14 1.7720 - 1.7288 0.50 2515 77 0.1894 0.2118 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5455 REMARK 3 ANGLE : 1.026 7452 REMARK 3 CHIRALITY : 0.039 833 REMARK 3 PLANARITY : 0.006 957 REMARK 3 DIHEDRAL : 13.807 2002 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000211183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0746 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68115 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 31.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3H9E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 MIXTURE OF PROTEIN:NAD+ COMPLEX AT REMARK 280 10 MG/ML WITH 0.2 M SODIUM NITRATE, 20% PEG3350, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.22100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.87050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.22100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.87050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -182.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -44.04263 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 67.79380 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NE2 HIS O 275 LIES ON A SPECIAL POSITION. REMARK 375 NE2 HIS P 275 LIES ON A SPECIAL POSITION. REMARK 375 HOH O 919 LIES ON A SPECIAL POSITION. REMARK 375 HOH P 890 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG O 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS O 408 CG CD CE NZ REMARK 470 ARG P 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS P 408 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS P 97 O HOH P 604 1.48 REMARK 500 O HOH O 629 O HOH O 782 1.84 REMARK 500 O HOH P 817 O HOH P 854 1.91 REMARK 500 N ARG P 74 O HOH P 601 2.00 REMARK 500 O HOH O 730 O HOH O 893 2.03 REMARK 500 O HOH O 794 O HOH O 883 2.05 REMARK 500 OE1 GLU O 332 O HOH O 601 2.08 REMARK 500 O GLY O 162 O HOH O 602 2.09 REMARK 500 OD1 ASN P 217 O HOH P 602 2.10 REMARK 500 O HOH P 799 O HOH P 854 2.11 REMARK 500 O HOH P 659 O HOH P 774 2.12 REMARK 500 O4 SO4 P 502 O HOH P 603 2.13 REMARK 500 O ASP O 407 O HOH O 603 2.19 REMARK 500 NZ LYS P 97 O HOH P 604 2.19 REMARK 500 O HOH O 864 O HOH O 890 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH O 821 O HOH P 832 2556 1.98 REMARK 500 O HOH O 884 O HOH P 653 2556 2.08 REMARK 500 O HOH O 850 O HOH P 792 2556 2.16 REMARK 500 O HOH O 806 O HOH P 832 2556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE O 83 56.60 -98.04 REMARK 500 ASP O 106 114.65 -161.32 REMARK 500 SER O 193 46.57 -85.48 REMARK 500 ASP O 198 -14.67 -144.16 REMARK 500 ASN O 207 24.88 -146.32 REMARK 500 ALA O 222 -158.58 61.17 REMARK 500 ASP O 261 109.13 -43.33 REMARK 500 ALA O 267 91.00 -162.27 REMARK 500 VAL O 312 132.63 85.18 REMARK 500 PHE P 83 53.66 -100.88 REMARK 500 ASP P 106 111.06 -162.69 REMARK 500 ARG P 134 148.35 -171.68 REMARK 500 SER P 163 63.37 36.84 REMARK 500 SER P 193 45.72 -88.10 REMARK 500 VAL P 206 -51.51 -124.89 REMARK 500 ASN P 207 24.88 -146.16 REMARK 500 ALA P 222 -155.46 60.53 REMARK 500 SER P 264 71.29 -151.15 REMARK 500 ALA P 267 92.12 -160.22 REMARK 500 VAL P 312 132.49 84.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN O 149 -12.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD O 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 O 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD P 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 P 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5C7L RELATED DB: PDB DBREF 5C7O O 74 407 UNP O14556 G3PT_HUMAN 74 407 DBREF 5C7O P 74 407 UNP O14556 G3PT_HUMAN 74 407 SEQADV 5C7O LYS O 408 UNP O14556 EXPRESSION TAG SEQADV 5C7O LYS P 408 UNP O14556 EXPRESSION TAG SEQRES 1 O 335 ARG GLU LEU THR VAL GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 O 335 GLY ARG LEU VAL LEU ARG ALA CYS MET GLU LYS GLY VAL SEQRES 3 O 335 LYS VAL VAL ALA VAL ASN ASP PRO PHE ILE ASP PRO GLU SEQRES 4 O 335 TYR MET VAL TYR MET PHE LYS TYR ASP SER THR HIS GLY SEQRES 5 O 335 ARG TYR LYS GLY SER VAL GLU PHE ARG ASN GLY GLN LEU SEQRES 6 O 335 VAL VAL ASP ASN HIS GLU ILE SER VAL TYR GLN CYS LYS SEQRES 7 O 335 GLU PRO LYS GLN ILE PRO TRP ARG ALA VAL GLY SER PRO SEQRES 8 O 335 TYR VAL VAL GLU SER THR GLY VAL TYR LEU SER ILE GLN SEQRES 9 O 335 ALA ALA SER ASP HIS ILE SER ALA GLY ALA GLN ARG VAL SEQRES 10 O 335 VAL ILE SER ALA PRO SER PRO ASP ALA PRO MET PHE VAL SEQRES 11 O 335 MET GLY VAL ASN GLU ASN ASP TYR ASN PRO GLY SER MET SEQRES 12 O 335 ASN ILE VAL SER ASN ALA SER OCS THR THR ASN CYS LEU SEQRES 13 O 335 ALA PRO LEU ALA LYS VAL ILE HIS GLU ARG PHE GLY ILE SEQRES 14 O 335 VAL GLU GLY LEU MET THR THR VAL HIS SER TYR THR ALA SEQRES 15 O 335 THR GLN LYS THR VAL ASP GLY PRO SER ARG LYS ALA TRP SEQRES 16 O 335 ARG ASP GLY ARG GLY ALA HIS GLN ASN ILE ILE PRO ALA SEQRES 17 O 335 SER THR GLY ALA ALA LYS ALA VAL THR LYS VAL ILE PRO SEQRES 18 O 335 GLU LEU LYS GLY LYS LEU THR GLY MET ALA PHE ARG VAL SEQRES 19 O 335 PRO THR PRO ASP VAL SER VAL VAL ASP LEU THR CYS ARG SEQRES 20 O 335 LEU ALA GLN PRO ALA PRO TYR SER ALA ILE LYS GLU ALA SEQRES 21 O 335 VAL LYS ALA ALA ALA LYS GLY PRO MET ALA GLY ILE LEU SEQRES 22 O 335 ALA TYR THR GLU ASP GLU VAL VAL SER THR ASP PHE LEU SEQRES 23 O 335 GLY ASP THR HIS SER SER ILE PHE ASP ALA LYS ALA GLY SEQRES 24 O 335 ILE ALA LEU ASN ASP ASN PHE VAL LYS LEU ILE SER TRP SEQRES 25 O 335 TYR ASP ASN GLU TYR GLY TYR SER HIS ARG VAL VAL ASP SEQRES 26 O 335 LEU LEU ARG TYR MET PHE SER ARG ASP LYS SEQRES 1 P 335 ARG GLU LEU THR VAL GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 P 335 GLY ARG LEU VAL LEU ARG ALA CYS MET GLU LYS GLY VAL SEQRES 3 P 335 LYS VAL VAL ALA VAL ASN ASP PRO PHE ILE ASP PRO GLU SEQRES 4 P 335 TYR MET VAL TYR MET PHE LYS TYR ASP SER THR HIS GLY SEQRES 5 P 335 ARG TYR LYS GLY SER VAL GLU PHE ARG ASN GLY GLN LEU SEQRES 6 P 335 VAL VAL ASP ASN HIS GLU ILE SER VAL TYR GLN CYS LYS SEQRES 7 P 335 GLU PRO LYS GLN ILE PRO TRP ARG ALA VAL GLY SER PRO SEQRES 8 P 335 TYR VAL VAL GLU SER THR GLY VAL TYR LEU SER ILE GLN SEQRES 9 P 335 ALA ALA SER ASP HIS ILE SER ALA GLY ALA GLN ARG VAL SEQRES 10 P 335 VAL ILE SER ALA PRO SER PRO ASP ALA PRO MET PHE VAL SEQRES 11 P 335 MET GLY VAL ASN GLU ASN ASP TYR ASN PRO GLY SER MET SEQRES 12 P 335 ASN ILE VAL SER ASN ALA SER OCS THR THR ASN CYS LEU SEQRES 13 P 335 ALA PRO LEU ALA LYS VAL ILE HIS GLU ARG PHE GLY ILE SEQRES 14 P 335 VAL GLU GLY LEU MET THR THR VAL HIS SER TYR THR ALA SEQRES 15 P 335 THR GLN LYS THR VAL ASP GLY PRO SER ARG LYS ALA TRP SEQRES 16 P 335 ARG ASP GLY ARG GLY ALA HIS GLN ASN ILE ILE PRO ALA SEQRES 17 P 335 SER THR GLY ALA ALA LYS ALA VAL THR LYS VAL ILE PRO SEQRES 18 P 335 GLU LEU LYS GLY LYS LEU THR GLY MET ALA PHE ARG VAL SEQRES 19 P 335 PRO THR PRO ASP VAL SER VAL VAL ASP LEU THR CYS ARG SEQRES 20 P 335 LEU ALA GLN PRO ALA PRO TYR SER ALA ILE LYS GLU ALA SEQRES 21 P 335 VAL LYS ALA ALA ALA LYS GLY PRO MET ALA GLY ILE LEU SEQRES 22 P 335 ALA TYR THR GLU ASP GLU VAL VAL SER THR ASP PHE LEU SEQRES 23 P 335 GLY ASP THR HIS SER SER ILE PHE ASP ALA LYS ALA GLY SEQRES 24 P 335 ILE ALA LEU ASN ASP ASN PHE VAL LYS LEU ILE SER TRP SEQRES 25 P 335 TYR ASP ASN GLU TYR GLY TYR SER HIS ARG VAL VAL ASP SEQRES 26 P 335 LEU LEU ARG TYR MET PHE SER ARG ASP LYS MODRES 5C7O OCS O 224 CYS MODIFIED RESIDUE MODRES 5C7O OCS P 224 CYS MODIFIED RESIDUE HET OCS O 224 11 HET OCS P 224 11 HET NAD O 501 70 HET SO4 O 502 5 HET NAD P 501 70 HET SO4 P 502 5 HETNAM OCS CYSTEINESULFONIC ACID HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM SO4 SULFATE ION FORMUL 1 OCS 2(C3 H7 N O5 S) FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *629(H2 O) HELIX 1 AA1 GLY O 84 GLY O 98 1 15 HELIX 2 AA2 ASP O 110 TYR O 120 1 11 HELIX 3 AA3 GLU O 152 ILE O 156 5 5 HELIX 4 AA4 PRO O 157 GLY O 162 5 6 HELIX 5 AA5 SER O 175 ALA O 185 1 11 HELIX 6 AA6 ASN O 207 TYR O 211 5 5 HELIX 7 AA7 SER O 223 GLY O 241 1 19 HELIX 8 AA8 ALA O 267 ARG O 272 5 6 HELIX 9 AA9 GLY O 284 ILE O 293 1 10 HELIX 10 AB1 PRO O 294 LYS O 297 5 4 HELIX 11 AB2 PRO O 326 GLY O 340 1 15 HELIX 12 AB3 VAL O 354 LEU O 359 5 6 HELIX 13 AB4 GLU O 389 ASP O 407 1 19 HELIX 14 AB5 GLY P 84 GLY P 98 1 15 HELIX 15 AB6 ASP P 110 TYR P 120 1 11 HELIX 16 AB7 GLU P 152 ILE P 156 5 5 HELIX 17 AB8 PRO P 157 GLY P 162 5 6 HELIX 18 AB9 SER P 175 SER P 180 1 6 HELIX 19 AC1 SER P 180 ALA P 185 1 6 HELIX 20 AC2 ASN P 207 TYR P 211 5 5 HELIX 21 AC3 SER P 223 GLY P 241 1 19 HELIX 22 AC4 ALA P 267 ARG P 272 5 6 HELIX 23 AC5 GLY P 284 ILE P 293 1 10 HELIX 24 AC6 PRO P 294 LYS P 297 5 4 HELIX 25 AC7 PRO P 326 GLY P 340 1 15 HELIX 26 AC8 VAL P 354 LEU P 359 5 6 HELIX 27 AC9 GLU P 389 ASP P 407 1 19 SHEET 1 AA1 8 VAL O 131 ARG O 134 0 SHEET 2 AA1 8 GLN O 137 VAL O 140 -1 O VAL O 139 N GLU O 132 SHEET 3 AA1 8 HIS O 143 TYR O 148 -1 O ILE O 145 N LEU O 138 SHEET 4 AA1 8 LYS O 100 ASN O 105 1 N VAL O 104 O TYR O 148 SHEET 5 AA1 8 THR O 77 ASN O 81 1 N ILE O 80 O ASN O 105 SHEET 6 AA1 8 TYR O 165 GLU O 168 1 O VAL O 167 N GLY O 79 SHEET 7 AA1 8 ARG O 189 ILE O 192 1 O VAL O 191 N VAL O 166 SHEET 8 AA1 8 ILE O 218 SER O 220 1 O VAL O 219 N ILE O 192 SHEET 1 AA2 7 ILE O 279 SER O 282 0 SHEET 2 AA2 7 LEU O 300 VAL O 307 -1 O ARG O 306 N ILE O 279 SHEET 3 AA2 7 ILE O 242 SER O 252 1 N HIS O 251 O PHE O 305 SHEET 4 AA2 7 SER O 313 LEU O 321 -1 O ARG O 320 N GLU O 244 SHEET 5 AA2 7 PHE O 379 TYR O 386 -1 O SER O 384 N VAL O 315 SHEET 6 AA2 7 SER O 365 ASP O 368 -1 N ASP O 368 O ILE O 383 SHEET 7 AA2 7 LEU O 346 THR O 349 1 N ALA O 347 O SER O 365 SHEET 1 AA3 6 ILE O 279 SER O 282 0 SHEET 2 AA3 6 LEU O 300 VAL O 307 -1 O ARG O 306 N ILE O 279 SHEET 3 AA3 6 ILE O 242 SER O 252 1 N HIS O 251 O PHE O 305 SHEET 4 AA3 6 SER O 313 LEU O 321 -1 O ARG O 320 N GLU O 244 SHEET 5 AA3 6 PHE O 379 TYR O 386 -1 O SER O 384 N VAL O 315 SHEET 6 AA3 6 ILE O 373 ASN O 376 -1 N ILE O 373 O LYS O 381 SHEET 1 AA4 8 VAL P 131 ARG P 134 0 SHEET 2 AA4 8 GLN P 137 VAL P 140 -1 O VAL P 139 N GLU P 132 SHEET 3 AA4 8 HIS P 143 TYR P 148 -1 O ILE P 145 N LEU P 138 SHEET 4 AA4 8 LYS P 100 ASN P 105 1 N VAL P 104 O TYR P 148 SHEET 5 AA4 8 THR P 77 ASN P 81 1 N ILE P 80 O ASN P 105 SHEET 6 AA4 8 TYR P 165 GLU P 168 1 O TYR P 165 N THR P 77 SHEET 7 AA4 8 ARG P 189 ILE P 192 1 O VAL P 191 N VAL P 166 SHEET 8 AA4 8 ILE P 218 SER P 220 1 O VAL P 219 N ILE P 192 SHEET 1 AA5 7 ILE P 279 SER P 282 0 SHEET 2 AA5 7 LEU P 300 VAL P 307 -1 O ARG P 306 N ILE P 279 SHEET 3 AA5 7 ILE P 242 SER P 252 1 N HIS P 251 O PHE P 305 SHEET 4 AA5 7 SER P 313 LEU P 321 -1 O ARG P 320 N GLU P 244 SHEET 5 AA5 7 PHE P 379 TYR P 386 -1 O SER P 384 N VAL P 315 SHEET 6 AA5 7 SER P 365 ASP P 368 -1 N ASP P 368 O ILE P 383 SHEET 7 AA5 7 LEU P 346 THR P 349 1 N ALA P 347 O SER P 365 SHEET 1 AA6 6 ILE P 279 SER P 282 0 SHEET 2 AA6 6 LEU P 300 VAL P 307 -1 O ARG P 306 N ILE P 279 SHEET 3 AA6 6 ILE P 242 SER P 252 1 N HIS P 251 O PHE P 305 SHEET 4 AA6 6 SER P 313 LEU P 321 -1 O ARG P 320 N GLU P 244 SHEET 5 AA6 6 PHE P 379 TYR P 386 -1 O SER P 384 N VAL P 315 SHEET 6 AA6 6 ILE P 373 ASN P 376 -1 N ILE P 373 O LYS P 381 LINK C SER O 223 N OCS O 224 1555 1555 1.33 LINK C OCS O 224 N THR O 225 1555 1555 1.33 LINK C SER P 223 N OCS P 224 1555 1555 1.33 LINK C OCS P 224 N THR P 225 1555 1555 1.33 SITE 1 AC1 33 ASN O 81 GLY O 82 PHE O 83 GLY O 84 SITE 2 AC1 33 ARG O 85 ILE O 86 ASP O 106 PRO O 107 SITE 3 AC1 33 PHE O 108 LYS O 151 SER O 169 THR O 170 SITE 4 AC1 33 GLY O 171 TYR O 173 SER O 193 ALA O 194 SITE 5 AC1 33 OCS O 224 ALA O 255 ASN O 388 TYR O 392 SITE 6 AC1 33 SO4 O 502 HOH O 611 HOH O 651 HOH O 666 SITE 7 AC1 33 HOH O 685 HOH O 697 HOH O 737 HOH O 743 SITE 8 AC1 33 HOH O 768 HOH O 771 HOH O 772 HOH O 778 SITE 9 AC1 33 HOH O 785 SITE 1 AC2 7 THR O 254 THR O 256 ARG O 306 NAD O 501 SITE 2 AC2 7 HOH O 611 HOH O 625 HOH O 685 SITE 1 AC3 33 ASN P 81 GLY P 82 PHE P 83 GLY P 84 SITE 2 AC3 33 ARG P 85 ILE P 86 ASP P 106 PRO P 107 SITE 3 AC3 33 PHE P 108 LYS P 151 SER P 169 THR P 170 SITE 4 AC3 33 GLY P 171 TYR P 173 SER P 193 ALA P 194 SITE 5 AC3 33 OCS P 224 ALA P 255 ASN P 388 TYR P 392 SITE 6 AC3 33 SO4 P 502 HOH P 603 HOH P 631 HOH P 638 SITE 7 AC3 33 HOH P 657 HOH P 671 HOH P 677 HOH P 710 SITE 8 AC3 33 HOH P 720 HOH P 730 HOH P 767 HOH P 775 SITE 9 AC3 33 HOH P 783 SITE 1 AC4 8 THR P 254 THR P 256 ARG P 306 NAD P 501 SITE 2 AC4 8 HOH P 603 HOH P 654 HOH P 678 HOH P 775 CRYST1 144.442 71.741 80.844 90.00 123.01 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006923 0.000000 0.004498 0.00000 SCALE2 0.000000 0.013939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014751 0.00000 CONECT 2331 2340 CONECT 2340 2331 2341 CONECT 2341 2340 2342 2344 2348 CONECT 2342 2341 2343 2349 2350 CONECT 2343 2342 2346 2347 CONECT 2344 2341 2345 2351 CONECT 2345 2344 CONECT 2346 2343 CONECT 2347 2343 CONECT 2348 2341 CONECT 2349 2342 CONECT 2350 2342 CONECT 2351 2344 CONECT 7537 7546 CONECT 7546 7537 7547 CONECT 7547 7546 7548 7550 7554 CONECT 7548 7547 7549 7555 7556 CONECT 7549 7548 7552 7553 CONECT 7550 7547 7551 7557 CONECT 7551 7550 CONECT 7552 7549 CONECT 7553 7549 CONECT 7554 7547 CONECT 7555 7548 CONECT 7556 7548 CONECT 7557 7550 CONECT1039810399104001040110420 CONECT1039910398 CONECT1040010398 CONECT104011039810402 CONECT1040210401104031044210443 CONECT1040310402104041040510444 CONECT104041040310409 CONECT1040510403104061040710445 CONECT104061040510446 CONECT1040710405104081040910447 CONECT104081040710448 CONECT1040910404104071041010449 CONECT10410104091041110419 CONECT10411104101041210450 CONECT104121041110413 CONECT10413104121041410419 CONECT10414104131041510416 CONECT10415104141045110452 CONECT104161041410417 CONECT10417104161041810453 CONECT104181041710419 CONECT10419104101041310418 CONECT104201039810421 CONECT1042110420104221042310424 CONECT1042210421 CONECT1042310421 CONECT104241042110425 CONECT1042510424104261045410455 CONECT1042610425104271042810456 CONECT104271042610432 CONECT1042810426104291043010457 CONECT104291042810458 CONECT1043010428104311043210459 CONECT104311043010460 CONECT1043210427104301043310461 CONECT10433104321043410441 CONECT10434104331043510462 CONECT10435104341043610439 CONECT10436104351043710438 CONECT1043710436 CONECT10438104361046310464 CONECT10439104351044010465 CONECT10440104391044110466 CONECT10441104331044010467 CONECT1044210402 CONECT1044310402 CONECT1044410403 CONECT1044510405 CONECT1044610406 CONECT1044710407 CONECT1044810408 CONECT1044910409 CONECT1045010411 CONECT1045110415 CONECT1045210415 CONECT1045310417 CONECT1045410425 CONECT1045510425 CONECT1045610426 CONECT1045710428 CONECT1045810429 CONECT1045910430 CONECT1046010431 CONECT1046110432 CONECT1046210434 CONECT1046310438 CONECT1046410438 CONECT1046510439 CONECT1046610440 CONECT1046710441 CONECT1046810469104701047110472 CONECT1046910468 CONECT1047010468 CONECT1047110468 CONECT1047210468 CONECT1047310474104751047610495 CONECT1047410473 CONECT1047510473 CONECT104761047310477 CONECT1047710476104781051710518 CONECT1047810477104791048010519 CONECT104791047810484 CONECT1048010478104811048210520 CONECT104811048010521 CONECT1048210480104831048410522 CONECT104831048210523 CONECT1048410479104821048510524 CONECT10485104841048610494 CONECT10486104851048710525 CONECT104871048610488 CONECT10488104871048910494 CONECT10489104881049010491 CONECT10490104891052610527 CONECT104911048910492 CONECT10492104911049310528 CONECT104931049210494 CONECT10494104851048810493 CONECT104951047310496 CONECT1049610495104971049810499 CONECT1049710496 CONECT1049810496 CONECT104991049610500 CONECT1050010499105011052910530 CONECT1050110500105021050310531 CONECT105021050110507 CONECT1050310501105041050510532 CONECT105041050310533 CONECT1050510503105061050710534 CONECT105061050510535 CONECT1050710502105051050810536 CONECT10508105071050910516 CONECT10509105081051010537 CONECT10510105091051110514 CONECT10511105101051210513 CONECT1051210511 CONECT10513105111053810539 CONECT10514105101051510540 CONECT10515105141051610541 CONECT10516105081051510542 CONECT1051710477 CONECT1051810477 CONECT1051910478 CONECT1052010480 CONECT1052110481 CONECT1052210482 CONECT1052310483 CONECT1052410484 CONECT1052510486 CONECT1052610490 CONECT1052710490 CONECT1052810492 CONECT1052910500 CONECT1053010500 CONECT1053110501 CONECT1053210503 CONECT1053310504 CONECT1053410505 CONECT1053510506 CONECT1053610507 CONECT1053710509 CONECT1053810513 CONECT1053910513 CONECT1054010514 CONECT1054110515 CONECT1054210516 CONECT1054310544105451054610547 CONECT1054410543 CONECT1054510543 CONECT1054610543 CONECT1054710543 MASTER 347 0 6 27 42 0 22 6 5851 2 176 52 END