data_5C91 # _entry.id 5C91 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5C91 pdb_00005c91 10.2210/pdb5c91/pdb WWPDB D_1000211231 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '2XBF contains the same protein in absence of the ligand' 2XBF unspecified PDB '2XBB contains the same protein in complex with ubiquitin' 2XBB unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5C91 _pdbx_database_status.recvd_initial_deposition_date 2015-06-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Span, I.' 1 'Smith, A.T.' 2 'Kathman, S.' 3 'Statsyuk, A.V.' 4 'Rosenzweig, A.C.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 137 _citation.language ? _citation.page_first 12442 _citation.page_last 12445 _citation.title 'A Small Molecule That Switches a Ubiquitin Ligase From a Processive to a Distributive Enzymatic Mechanism.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.5b06839 _citation.pdbx_database_id_PubMed 26371805 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kathman, S.G.' 1 ? primary 'Span, I.' 2 ? primary 'Smith, A.T.' 3 ? primary 'Xu, Z.' 4 ? primary 'Zhan, J.' 5 ? primary 'Rosenzweig, A.C.' 6 ? primary 'Statsyuk, A.V.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 93.130 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5C91 _cell.details ? _cell.formula_units_Z ? _cell.length_a 175.200 _cell.length_a_esd ? _cell.length_b 38.730 _cell.length_b_esd ? _cell.length_c 60.360 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5C91 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase NEDD4' 44739.031 1 6.3.2.- ? 'unp residues 938-1312' ? 2 non-polymer syn 'methyl (2E)-4-{[(5-methoxy-1,2-dimethyl-1H-indol-3-yl)carbonyl]amino}but-2-enoate' 316.352 1 ? ? ? ? 3 water nat water 18.015 7 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cell proliferation-inducing gene 53 protein,Neural precursor cell expressed developmentally down-regulated protein 4,NEDD-4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SRDYKRKYEFFRRKLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISK EMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVD SEYYNSLRWILENDPTELDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFE LIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGF AELYGSNGPQSFTVEQWGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENT ; _entity_poly.pdbx_seq_one_letter_code_can ;SRDYKRKYEFFRRKLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISK EMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVD SEYYNSLRWILENDPTELDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFE LIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGF AELYGSNGPQSFTVEQWGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ARG n 1 3 ASP n 1 4 TYR n 1 5 LYS n 1 6 ARG n 1 7 LYS n 1 8 TYR n 1 9 GLU n 1 10 PHE n 1 11 PHE n 1 12 ARG n 1 13 ARG n 1 14 LYS n 1 15 LEU n 1 16 LYS n 1 17 LYS n 1 18 GLN n 1 19 ASN n 1 20 ASP n 1 21 ILE n 1 22 PRO n 1 23 ASN n 1 24 LYS n 1 25 PHE n 1 26 GLU n 1 27 MET n 1 28 LYS n 1 29 LEU n 1 30 ARG n 1 31 ARG n 1 32 ALA n 1 33 THR n 1 34 VAL n 1 35 LEU n 1 36 GLU n 1 37 ASP n 1 38 SER n 1 39 TYR n 1 40 ARG n 1 41 ARG n 1 42 ILE n 1 43 MET n 1 44 GLY n 1 45 VAL n 1 46 LYS n 1 47 ARG n 1 48 ALA n 1 49 ASP n 1 50 PHE n 1 51 LEU n 1 52 LYS n 1 53 ALA n 1 54 ARG n 1 55 LEU n 1 56 TRP n 1 57 ILE n 1 58 GLU n 1 59 PHE n 1 60 ASP n 1 61 GLY n 1 62 GLU n 1 63 LYS n 1 64 GLY n 1 65 LEU n 1 66 ASP n 1 67 TYR n 1 68 GLY n 1 69 GLY n 1 70 VAL n 1 71 ALA n 1 72 ARG n 1 73 GLU n 1 74 TRP n 1 75 PHE n 1 76 PHE n 1 77 LEU n 1 78 ILE n 1 79 SER n 1 80 LYS n 1 81 GLU n 1 82 MET n 1 83 PHE n 1 84 ASN n 1 85 PRO n 1 86 TYR n 1 87 TYR n 1 88 GLY n 1 89 LEU n 1 90 PHE n 1 91 GLU n 1 92 TYR n 1 93 SER n 1 94 ALA n 1 95 THR n 1 96 ASP n 1 97 ASN n 1 98 TYR n 1 99 THR n 1 100 LEU n 1 101 GLN n 1 102 ILE n 1 103 ASN n 1 104 PRO n 1 105 ASN n 1 106 SER n 1 107 GLY n 1 108 LEU n 1 109 CYS n 1 110 ASN n 1 111 GLU n 1 112 ASP n 1 113 HIS n 1 114 LEU n 1 115 SER n 1 116 TYR n 1 117 PHE n 1 118 LYS n 1 119 PHE n 1 120 ILE n 1 121 GLY n 1 122 ARG n 1 123 VAL n 1 124 ALA n 1 125 GLY n 1 126 MET n 1 127 ALA n 1 128 VAL n 1 129 TYR n 1 130 HIS n 1 131 GLY n 1 132 LYS n 1 133 LEU n 1 134 LEU n 1 135 ASP n 1 136 GLY n 1 137 PHE n 1 138 PHE n 1 139 ILE n 1 140 ARG n 1 141 PRO n 1 142 PHE n 1 143 TYR n 1 144 LYS n 1 145 MET n 1 146 MET n 1 147 LEU n 1 148 HIS n 1 149 LYS n 1 150 PRO n 1 151 ILE n 1 152 THR n 1 153 LEU n 1 154 HIS n 1 155 ASP n 1 156 MET n 1 157 GLU n 1 158 SER n 1 159 VAL n 1 160 ASP n 1 161 SER n 1 162 GLU n 1 163 TYR n 1 164 TYR n 1 165 ASN n 1 166 SER n 1 167 LEU n 1 168 ARG n 1 169 TRP n 1 170 ILE n 1 171 LEU n 1 172 GLU n 1 173 ASN n 1 174 ASP n 1 175 PRO n 1 176 THR n 1 177 GLU n 1 178 LEU n 1 179 ASP n 1 180 LEU n 1 181 ARG n 1 182 PHE n 1 183 ILE n 1 184 ILE n 1 185 ASP n 1 186 GLU n 1 187 GLU n 1 188 LEU n 1 189 PHE n 1 190 GLY n 1 191 GLN n 1 192 THR n 1 193 HIS n 1 194 GLN n 1 195 HIS n 1 196 GLU n 1 197 LEU n 1 198 LYS n 1 199 ASN n 1 200 GLY n 1 201 GLY n 1 202 SER n 1 203 GLU n 1 204 ILE n 1 205 VAL n 1 206 VAL n 1 207 THR n 1 208 ASN n 1 209 LYS n 1 210 ASN n 1 211 LYS n 1 212 LYS n 1 213 GLU n 1 214 TYR n 1 215 ILE n 1 216 TYR n 1 217 LEU n 1 218 VAL n 1 219 ILE n 1 220 GLN n 1 221 TRP n 1 222 ARG n 1 223 PHE n 1 224 VAL n 1 225 ASN n 1 226 ARG n 1 227 ILE n 1 228 GLN n 1 229 LYS n 1 230 GLN n 1 231 MET n 1 232 ALA n 1 233 ALA n 1 234 PHE n 1 235 LYS n 1 236 GLU n 1 237 GLY n 1 238 PHE n 1 239 PHE n 1 240 GLU n 1 241 LEU n 1 242 ILE n 1 243 PRO n 1 244 GLN n 1 245 ASP n 1 246 LEU n 1 247 ILE n 1 248 LYS n 1 249 ILE n 1 250 PHE n 1 251 ASP n 1 252 GLU n 1 253 ASN n 1 254 GLU n 1 255 LEU n 1 256 GLU n 1 257 LEU n 1 258 LEU n 1 259 MET n 1 260 CYS n 1 261 GLY n 1 262 LEU n 1 263 GLY n 1 264 ASP n 1 265 VAL n 1 266 ASP n 1 267 VAL n 1 268 ASN n 1 269 ASP n 1 270 TRP n 1 271 ARG n 1 272 GLU n 1 273 HIS n 1 274 THR n 1 275 LYS n 1 276 TYR n 1 277 LYS n 1 278 ASN n 1 279 GLY n 1 280 TYR n 1 281 SER n 1 282 ALA n 1 283 ASN n 1 284 HIS n 1 285 GLN n 1 286 VAL n 1 287 ILE n 1 288 GLN n 1 289 TRP n 1 290 PHE n 1 291 TRP n 1 292 LYS n 1 293 ALA n 1 294 VAL n 1 295 LEU n 1 296 MET n 1 297 MET n 1 298 ASP n 1 299 SER n 1 300 GLU n 1 301 LYS n 1 302 ARG n 1 303 ILE n 1 304 ARG n 1 305 LEU n 1 306 LEU n 1 307 GLN n 1 308 PHE n 1 309 VAL n 1 310 THR n 1 311 GLY n 1 312 THR n 1 313 SER n 1 314 ARG n 1 315 VAL n 1 316 PRO n 1 317 MET n 1 318 ASN n 1 319 GLY n 1 320 PHE n 1 321 ALA n 1 322 GLU n 1 323 LEU n 1 324 TYR n 1 325 GLY n 1 326 SER n 1 327 ASN n 1 328 GLY n 1 329 PRO n 1 330 GLN n 1 331 SER n 1 332 PHE n 1 333 THR n 1 334 VAL n 1 335 GLU n 1 336 GLN n 1 337 TRP n 1 338 GLY n 1 339 THR n 1 340 PRO n 1 341 GLU n 1 342 LYS n 1 343 LEU n 1 344 PRO n 1 345 ARG n 1 346 ALA n 1 347 HIS n 1 348 THR n 1 349 CYS n 1 350 PHE n 1 351 ASN n 1 352 ARG n 1 353 LEU n 1 354 ASP n 1 355 LEU n 1 356 PRO n 1 357 PRO n 1 358 TYR n 1 359 GLU n 1 360 SER n 1 361 PHE n 1 362 GLU n 1 363 GLU n 1 364 LEU n 1 365 TRP n 1 366 ASP n 1 367 LYS n 1 368 LEU n 1 369 GLN n 1 370 MET n 1 371 ALA n 1 372 ILE n 1 373 GLU n 1 374 ASN n 1 375 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 375 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NEDD4, KIAA0093, NEDD4-1, PIG53' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NEDD4_HUMAN _struct_ref.pdbx_db_accession P46934 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SRDYKRKYEFFRRKLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISK EMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVD SEYYNSLRWILENDPTELDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFE LIPQDLIKIFDENELELLMCGLGDVDVNDWREHTKYKNGYSANHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGF AELYGSNGPQSFTVEQWGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENT ; _struct_ref.pdbx_align_begin 938 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5C91 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 375 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P46934 _struct_ref_seq.db_align_beg 938 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1312 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 519 _struct_ref_seq.pdbx_auth_seq_align_end 893 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4YU non-polymer . 'methyl (2E)-4-{[(5-methoxy-1,2-dimethyl-1H-indol-3-yl)carbonyl]amino}but-2-enoate' ? 'C17 H20 N2 O4' 316.352 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5C91 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MES, 35 mM calcium chloride, 5 mM TCEP, 6% PEG400' _exptl_crystal_grow.pdbx_pH_range 6.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-03-10 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double crystal cryo-cooled' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.033 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 23.030 _reflns.entry_id 5C91 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.440 _reflns.d_resolution_low 32.200 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15105 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.200 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.071 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 47656 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.440 2.500 ? 2.000 3418 ? ? 1087 ? 98.700 ? ? ? ? 0.602 ? ? ? ? ? ? ? ? 3.100 ? ? ? ? ? 0.472 0 1 1 ? ? 10.910 32.200 ? 48.400 566 ? ? 182 ? 93.700 ? ? ? ? 0.018 ? ? ? ? ? ? ? ? 3.100 ? ? ? ? ? 0.014 0 2 1 ? ? # _refine.aniso_B[1][1] -2.6900 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -1.0900 _refine.aniso_B[2][2] 1.6300 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 1.1700 _refine.B_iso_max 111.450 _refine.B_iso_mean 50.3760 _refine.B_iso_min 24.600 _refine.correlation_coeff_Fo_to_Fc 0.9180 _refine.correlation_coeff_Fo_to_Fc_free 0.8770 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5C91 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4400 _refine.ls_d_res_low 31.8600 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14371 _refine.ls_number_reflns_R_free 731 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.8300 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2501 _refine.ls_R_factor_R_free 0.2977 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2478 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2XBF _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.8900 _refine.pdbx_overall_ESU_R_Free 0.3510 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 36.1630 _refine.overall_SU_ML 0.3590 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.4400 _refine_hist.d_res_low 31.8600 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 3186 _refine_hist.pdbx_number_residues_total 375 _refine_hist.pdbx_B_iso_mean_ligand 63.22 _refine_hist.pdbx_B_iso_mean_solvent 35.44 _refine_hist.pdbx_number_atoms_protein 3156 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 0.019 3288 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 3080 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.036 1.951 4435 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.711 3.000 7077 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.984 5.000 378 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.891 23.729 177 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.789 15.000 590 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.096 15.000 23 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.057 0.200 444 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 3713 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 836 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.480 4.215 1510 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.480 4.217 1511 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.618 6.315 1888 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.4400 _refine_ls_shell.d_res_low 2.5030 _refine_ls_shell.number_reflns_all 1082 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_R_work 1027 _refine_ls_shell.percent_reflns_obs 98.0100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4750 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3610 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5C91 _struct.title 'NEDD4 HECT with covalently bound indole-based inhibitor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5C91 _struct_keywords.text 'NEDD4, HECT, LIGASE, INHIBITOR, ligase-ligase inhibitor complex' _struct_keywords.pdbx_keywords 'ligase/ligase inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 3 ? LEU A 15 ? ASP A 521 LEU A 533 1 ? 13 HELX_P HELX_P2 AA2 ARG A 30 ? ALA A 32 ? ARG A 548 ALA A 550 5 ? 3 HELX_P HELX_P3 AA3 THR A 33 ? MET A 43 ? THR A 551 MET A 561 1 ? 11 HELX_P HELX_P4 AA4 ARG A 47 ? ALA A 53 ? ARG A 565 ALA A 571 5 ? 7 HELX_P HELX_P5 AA5 ASP A 66 ? PHE A 83 ? ASP A 584 PHE A 601 1 ? 18 HELX_P HELX_P6 AA6 ASN A 84 ? GLY A 88 ? ASN A 602 GLY A 606 5 ? 5 HELX_P HELX_P7 AA7 ASN A 105 ? ASN A 110 ? ASN A 623 ASN A 628 1 ? 6 HELX_P HELX_P8 AA8 ASP A 112 ? GLY A 131 ? ASP A 630 GLY A 649 1 ? 20 HELX_P HELX_P9 AA9 ILE A 139 ? LEU A 147 ? ILE A 657 LEU A 665 1 ? 9 HELX_P HELX_P10 AB1 LEU A 153 ? ASP A 160 ? LEU A 671 ASP A 678 1 ? 8 HELX_P HELX_P11 AB2 ASP A 160 ? ASN A 173 ? ASP A 678 ASN A 691 1 ? 14 HELX_P HELX_P12 AB3 PRO A 175 ? ASP A 179 ? PRO A 693 ASP A 697 5 ? 5 HELX_P HELX_P13 AB4 GLY A 200 ? ILE A 204 ? GLY A 718 ILE A 722 5 ? 5 HELX_P HELX_P14 AB5 ASN A 210 ? VAL A 224 ? ASN A 728 VAL A 742 1 ? 15 HELX_P HELX_P15 AB6 ILE A 227 ? ILE A 242 ? ILE A 745 ILE A 760 1 ? 16 HELX_P HELX_P16 AB7 PRO A 243 ? LYS A 248 ? PRO A 761 LYS A 766 1 ? 6 HELX_P HELX_P17 AB8 ASP A 251 ? CYS A 260 ? ASP A 769 CYS A 778 1 ? 10 HELX_P HELX_P18 AB9 ASP A 266 ? HIS A 273 ? ASP A 784 HIS A 791 1 ? 8 HELX_P HELX_P19 AC1 HIS A 284 ? MET A 297 ? HIS A 802 MET A 815 1 ? 14 HELX_P HELX_P20 AC2 ASP A 298 ? GLY A 311 ? ASP A 816 GLY A 829 1 ? 14 HELX_P HELX_P21 AC3 GLY A 319 ? LEU A 323 ? GLY A 837 LEU A 841 5 ? 5 HELX_P HELX_P22 AC4 THR A 348 ? PHE A 350 ? THR A 866 PHE A 868 5 ? 3 HELX_P HELX_P23 AC5 SER A 360 ? GLU A 373 ? SER A 878 GLU A 891 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 109 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id 4YU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C3 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 627 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 4YU _struct_conn.ptnr2_auth_seq_id 901 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.759 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 262 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 780 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 263 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 781 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 24 ? LEU A 29 ? LYS A 542 LEU A 547 AA1 2 ARG A 54 ? PHE A 59 ? ARG A 572 PHE A 577 AA2 1 PHE A 90 ? TYR A 92 ? PHE A 608 TYR A 610 AA2 2 LEU A 100 ? ILE A 102 ? LEU A 618 ILE A 620 AA3 1 ILE A 183 ? LEU A 188 ? ILE A 701 LEU A 706 AA3 2 GLN A 191 ? GLU A 196 ? GLN A 709 GLU A 714 AA4 1 LYS A 275 ? LYS A 277 ? LYS A 793 LYS A 795 AA4 2 THR A 333 ? GLU A 335 ? THR A 851 GLU A 853 AA4 3 ARG A 352 ? ASP A 354 ? ARG A 870 ASP A 872 AA4 4 ARG A 345 ? HIS A 347 ? ARG A 863 HIS A 865 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 25 ? N PHE A 543 O ARG A 54 ? O ARG A 572 AA2 1 2 N GLU A 91 ? N GLU A 609 O GLN A 101 ? O GLN A 619 AA3 1 2 N GLU A 186 ? N GLU A 704 O HIS A 193 ? O HIS A 711 AA4 1 2 N LYS A 277 ? N LYS A 795 O VAL A 334 ? O VAL A 852 AA4 2 3 N THR A 333 ? N THR A 851 O LEU A 353 ? O LEU A 871 AA4 3 4 O ASP A 354 ? O ASP A 872 N ARG A 345 ? N ARG A 863 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 4YU _struct_site.pdbx_auth_seq_id 901 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'binding site for residue 4YU A 901' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLU A 36 ? GLU A 554 . ? 1_555 ? 2 AC1 10 TYR A 86 ? TYR A 604 . ? 1_555 ? 3 AC1 10 TYR A 87 ? TYR A 605 . ? 1_555 ? 4 AC1 10 LEU A 89 ? LEU A 607 . ? 1_555 ? 5 AC1 10 ASN A 103 ? ASN A 621 . ? 1_555 ? 6 AC1 10 ASN A 105 ? ASN A 623 . ? 1_555 ? 7 AC1 10 SER A 106 ? SER A 624 . ? 1_555 ? 8 AC1 10 CYS A 109 ? CYS A 627 . ? 1_555 ? 9 AC1 10 ASN A 110 ? ASN A 628 . ? 1_555 ? 10 AC1 10 LYS A 229 ? LYS A 747 . ? 4_455 ? # _atom_sites.entry_id 5C91 _atom_sites.fract_transf_matrix[1][1] 0.005708 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000312 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025820 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016592 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 519 519 SER SER A . n A 1 2 ARG 2 520 520 ARG ARG A . n A 1 3 ASP 3 521 521 ASP ASP A . n A 1 4 TYR 4 522 522 TYR TYR A . n A 1 5 LYS 5 523 523 LYS LYS A . n A 1 6 ARG 6 524 524 ARG ARG A . n A 1 7 LYS 7 525 525 LYS LYS A . n A 1 8 TYR 8 526 526 TYR TYR A . n A 1 9 GLU 9 527 527 GLU GLU A . n A 1 10 PHE 10 528 528 PHE PHE A . n A 1 11 PHE 11 529 529 PHE PHE A . n A 1 12 ARG 12 530 530 ARG ARG A . n A 1 13 ARG 13 531 531 ARG ARG A . n A 1 14 LYS 14 532 532 LYS LYS A . n A 1 15 LEU 15 533 533 LEU LEU A . n A 1 16 LYS 16 534 534 LYS LYS A . n A 1 17 LYS 17 535 535 LYS LYS A . n A 1 18 GLN 18 536 536 GLN GLN A . n A 1 19 ASN 19 537 537 ASN ASN A . n A 1 20 ASP 20 538 538 ASP ASP A . n A 1 21 ILE 21 539 539 ILE ILE A . n A 1 22 PRO 22 540 540 PRO PRO A . n A 1 23 ASN 23 541 541 ASN ASN A . n A 1 24 LYS 24 542 542 LYS LYS A . n A 1 25 PHE 25 543 543 PHE PHE A . n A 1 26 GLU 26 544 544 GLU GLU A . n A 1 27 MET 27 545 545 MET MET A . n A 1 28 LYS 28 546 546 LYS LYS A . n A 1 29 LEU 29 547 547 LEU LEU A . n A 1 30 ARG 30 548 548 ARG ARG A . n A 1 31 ARG 31 549 549 ARG ARG A . n A 1 32 ALA 32 550 550 ALA ALA A . n A 1 33 THR 33 551 551 THR THR A . n A 1 34 VAL 34 552 552 VAL VAL A . n A 1 35 LEU 35 553 553 LEU LEU A . n A 1 36 GLU 36 554 554 GLU GLU A . n A 1 37 ASP 37 555 555 ASP ASP A . n A 1 38 SER 38 556 556 SER SER A . n A 1 39 TYR 39 557 557 TYR TYR A . n A 1 40 ARG 40 558 558 ARG ARG A . n A 1 41 ARG 41 559 559 ARG ARG A . n A 1 42 ILE 42 560 560 ILE ILE A . n A 1 43 MET 43 561 561 MET MET A . n A 1 44 GLY 44 562 562 GLY GLY A . n A 1 45 VAL 45 563 563 VAL VAL A . n A 1 46 LYS 46 564 564 LYS LYS A . n A 1 47 ARG 47 565 565 ARG ARG A . n A 1 48 ALA 48 566 566 ALA ALA A . n A 1 49 ASP 49 567 567 ASP ASP A . n A 1 50 PHE 50 568 568 PHE PHE A . n A 1 51 LEU 51 569 569 LEU LEU A . n A 1 52 LYS 52 570 570 LYS LYS A . n A 1 53 ALA 53 571 571 ALA ALA A . n A 1 54 ARG 54 572 572 ARG ARG A . n A 1 55 LEU 55 573 573 LEU LEU A . n A 1 56 TRP 56 574 574 TRP TRP A . n A 1 57 ILE 57 575 575 ILE ILE A . n A 1 58 GLU 58 576 576 GLU GLU A . n A 1 59 PHE 59 577 577 PHE PHE A . n A 1 60 ASP 60 578 578 ASP ASP A . n A 1 61 GLY 61 579 579 GLY GLY A . n A 1 62 GLU 62 580 580 GLU GLU A . n A 1 63 LYS 63 581 581 LYS LYS A . n A 1 64 GLY 64 582 582 GLY GLY A . n A 1 65 LEU 65 583 583 LEU LEU A . n A 1 66 ASP 66 584 584 ASP ASP A . n A 1 67 TYR 67 585 585 TYR TYR A . n A 1 68 GLY 68 586 586 GLY GLY A . n A 1 69 GLY 69 587 587 GLY GLY A . n A 1 70 VAL 70 588 588 VAL VAL A . n A 1 71 ALA 71 589 589 ALA ALA A . n A 1 72 ARG 72 590 590 ARG ARG A . n A 1 73 GLU 73 591 591 GLU GLU A . n A 1 74 TRP 74 592 592 TRP TRP A . n A 1 75 PHE 75 593 593 PHE PHE A . n A 1 76 PHE 76 594 594 PHE PHE A . n A 1 77 LEU 77 595 595 LEU LEU A . n A 1 78 ILE 78 596 596 ILE ILE A . n A 1 79 SER 79 597 597 SER SER A . n A 1 80 LYS 80 598 598 LYS LYS A . n A 1 81 GLU 81 599 599 GLU GLU A . n A 1 82 MET 82 600 600 MET MET A . n A 1 83 PHE 83 601 601 PHE PHE A . n A 1 84 ASN 84 602 602 ASN ASN A . n A 1 85 PRO 85 603 603 PRO PRO A . n A 1 86 TYR 86 604 604 TYR TYR A . n A 1 87 TYR 87 605 605 TYR TYR A . n A 1 88 GLY 88 606 606 GLY GLY A . n A 1 89 LEU 89 607 607 LEU LEU A . n A 1 90 PHE 90 608 608 PHE PHE A . n A 1 91 GLU 91 609 609 GLU GLU A . n A 1 92 TYR 92 610 610 TYR TYR A . n A 1 93 SER 93 611 611 SER SER A . n A 1 94 ALA 94 612 612 ALA ALA A . n A 1 95 THR 95 613 613 THR THR A . n A 1 96 ASP 96 614 614 ASP ASP A . n A 1 97 ASN 97 615 615 ASN ASN A . n A 1 98 TYR 98 616 616 TYR TYR A . n A 1 99 THR 99 617 617 THR THR A . n A 1 100 LEU 100 618 618 LEU LEU A . n A 1 101 GLN 101 619 619 GLN GLN A . n A 1 102 ILE 102 620 620 ILE ILE A . n A 1 103 ASN 103 621 621 ASN ASN A . n A 1 104 PRO 104 622 622 PRO PRO A . n A 1 105 ASN 105 623 623 ASN ASN A . n A 1 106 SER 106 624 624 SER SER A . n A 1 107 GLY 107 625 625 GLY GLY A . n A 1 108 LEU 108 626 626 LEU LEU A . n A 1 109 CYS 109 627 627 CYS CYS A . n A 1 110 ASN 110 628 628 ASN ASN A . n A 1 111 GLU 111 629 629 GLU GLU A . n A 1 112 ASP 112 630 630 ASP ASP A . n A 1 113 HIS 113 631 631 HIS HIS A . n A 1 114 LEU 114 632 632 LEU LEU A . n A 1 115 SER 115 633 633 SER SER A . n A 1 116 TYR 116 634 634 TYR TYR A . n A 1 117 PHE 117 635 635 PHE PHE A . n A 1 118 LYS 118 636 636 LYS LYS A . n A 1 119 PHE 119 637 637 PHE PHE A . n A 1 120 ILE 120 638 638 ILE ILE A . n A 1 121 GLY 121 639 639 GLY GLY A . n A 1 122 ARG 122 640 640 ARG ARG A . n A 1 123 VAL 123 641 641 VAL VAL A . n A 1 124 ALA 124 642 642 ALA ALA A . n A 1 125 GLY 125 643 643 GLY GLY A . n A 1 126 MET 126 644 644 MET MET A . n A 1 127 ALA 127 645 645 ALA ALA A . n A 1 128 VAL 128 646 646 VAL VAL A . n A 1 129 TYR 129 647 647 TYR TYR A . n A 1 130 HIS 130 648 648 HIS HIS A . n A 1 131 GLY 131 649 649 GLY GLY A . n A 1 132 LYS 132 650 650 LYS LYS A . n A 1 133 LEU 133 651 651 LEU LEU A . n A 1 134 LEU 134 652 652 LEU LEU A . n A 1 135 ASP 135 653 653 ASP ASP A . n A 1 136 GLY 136 654 654 GLY GLY A . n A 1 137 PHE 137 655 655 PHE PHE A . n A 1 138 PHE 138 656 656 PHE PHE A . n A 1 139 ILE 139 657 657 ILE ILE A . n A 1 140 ARG 140 658 658 ARG ARG A . n A 1 141 PRO 141 659 659 PRO PRO A . n A 1 142 PHE 142 660 660 PHE PHE A . n A 1 143 TYR 143 661 661 TYR TYR A . n A 1 144 LYS 144 662 662 LYS LYS A . n A 1 145 MET 145 663 663 MET MET A . n A 1 146 MET 146 664 664 MET MET A . n A 1 147 LEU 147 665 665 LEU LEU A . n A 1 148 HIS 148 666 666 HIS HIS A . n A 1 149 LYS 149 667 667 LYS LYS A . n A 1 150 PRO 150 668 668 PRO PRO A . n A 1 151 ILE 151 669 669 ILE ILE A . n A 1 152 THR 152 670 670 THR THR A . n A 1 153 LEU 153 671 671 LEU LEU A . n A 1 154 HIS 154 672 672 HIS HIS A . n A 1 155 ASP 155 673 673 ASP ASP A . n A 1 156 MET 156 674 674 MET MET A . n A 1 157 GLU 157 675 675 GLU GLU A . n A 1 158 SER 158 676 676 SER SER A . n A 1 159 VAL 159 677 677 VAL VAL A . n A 1 160 ASP 160 678 678 ASP ASP A . n A 1 161 SER 161 679 679 SER SER A . n A 1 162 GLU 162 680 680 GLU GLU A . n A 1 163 TYR 163 681 681 TYR TYR A . n A 1 164 TYR 164 682 682 TYR TYR A . n A 1 165 ASN 165 683 683 ASN ASN A . n A 1 166 SER 166 684 684 SER SER A . n A 1 167 LEU 167 685 685 LEU LEU A . n A 1 168 ARG 168 686 686 ARG ARG A . n A 1 169 TRP 169 687 687 TRP TRP A . n A 1 170 ILE 170 688 688 ILE ILE A . n A 1 171 LEU 171 689 689 LEU LEU A . n A 1 172 GLU 172 690 690 GLU GLU A . n A 1 173 ASN 173 691 691 ASN ASN A . n A 1 174 ASP 174 692 692 ASP ASP A . n A 1 175 PRO 175 693 693 PRO PRO A . n A 1 176 THR 176 694 694 THR THR A . n A 1 177 GLU 177 695 695 GLU GLU A . n A 1 178 LEU 178 696 696 LEU LEU A . n A 1 179 ASP 179 697 697 ASP ASP A . n A 1 180 LEU 180 698 698 LEU LEU A . n A 1 181 ARG 181 699 699 ARG ARG A . n A 1 182 PHE 182 700 700 PHE PHE A . n A 1 183 ILE 183 701 701 ILE ILE A . n A 1 184 ILE 184 702 702 ILE ILE A . n A 1 185 ASP 185 703 703 ASP ASP A . n A 1 186 GLU 186 704 704 GLU GLU A . n A 1 187 GLU 187 705 705 GLU GLU A . n A 1 188 LEU 188 706 706 LEU LEU A . n A 1 189 PHE 189 707 707 PHE PHE A . n A 1 190 GLY 190 708 708 GLY GLY A . n A 1 191 GLN 191 709 709 GLN GLN A . n A 1 192 THR 192 710 710 THR THR A . n A 1 193 HIS 193 711 711 HIS HIS A . n A 1 194 GLN 194 712 712 GLN GLN A . n A 1 195 HIS 195 713 713 HIS HIS A . n A 1 196 GLU 196 714 714 GLU GLU A . n A 1 197 LEU 197 715 715 LEU LEU A . n A 1 198 LYS 198 716 716 LYS LYS A . n A 1 199 ASN 199 717 717 ASN ASN A . n A 1 200 GLY 200 718 718 GLY GLY A . n A 1 201 GLY 201 719 719 GLY GLY A . n A 1 202 SER 202 720 720 SER SER A . n A 1 203 GLU 203 721 721 GLU GLU A . n A 1 204 ILE 204 722 722 ILE ILE A . n A 1 205 VAL 205 723 723 VAL VAL A . n A 1 206 VAL 206 724 724 VAL VAL A . n A 1 207 THR 207 725 725 THR THR A . n A 1 208 ASN 208 726 726 ASN ASN A . n A 1 209 LYS 209 727 727 LYS LYS A . n A 1 210 ASN 210 728 728 ASN ASN A . n A 1 211 LYS 211 729 729 LYS LYS A . n A 1 212 LYS 212 730 730 LYS LYS A . n A 1 213 GLU 213 731 731 GLU GLU A . n A 1 214 TYR 214 732 732 TYR TYR A . n A 1 215 ILE 215 733 733 ILE ILE A . n A 1 216 TYR 216 734 734 TYR TYR A . n A 1 217 LEU 217 735 735 LEU LEU A . n A 1 218 VAL 218 736 736 VAL VAL A . n A 1 219 ILE 219 737 737 ILE ILE A . n A 1 220 GLN 220 738 738 GLN GLN A . n A 1 221 TRP 221 739 739 TRP TRP A . n A 1 222 ARG 222 740 740 ARG ARG A . n A 1 223 PHE 223 741 741 PHE PHE A . n A 1 224 VAL 224 742 742 VAL VAL A . n A 1 225 ASN 225 743 743 ASN ASN A . n A 1 226 ARG 226 744 744 ARG ARG A . n A 1 227 ILE 227 745 745 ILE ILE A . n A 1 228 GLN 228 746 746 GLN GLN A . n A 1 229 LYS 229 747 747 LYS LYS A . n A 1 230 GLN 230 748 748 GLN GLN A . n A 1 231 MET 231 749 749 MET MET A . n A 1 232 ALA 232 750 750 ALA ALA A . n A 1 233 ALA 233 751 751 ALA ALA A . n A 1 234 PHE 234 752 752 PHE PHE A . n A 1 235 LYS 235 753 753 LYS LYS A . n A 1 236 GLU 236 754 754 GLU GLU A . n A 1 237 GLY 237 755 755 GLY GLY A . n A 1 238 PHE 238 756 756 PHE PHE A . n A 1 239 PHE 239 757 757 PHE PHE A . n A 1 240 GLU 240 758 758 GLU GLU A . n A 1 241 LEU 241 759 759 LEU LEU A . n A 1 242 ILE 242 760 760 ILE ILE A . n A 1 243 PRO 243 761 761 PRO PRO A . n A 1 244 GLN 244 762 762 GLN GLN A . n A 1 245 ASP 245 763 763 ASP ASP A . n A 1 246 LEU 246 764 764 LEU LEU A . n A 1 247 ILE 247 765 765 ILE ILE A . n A 1 248 LYS 248 766 766 LYS LYS A . n A 1 249 ILE 249 767 767 ILE ILE A . n A 1 250 PHE 250 768 768 PHE PHE A . n A 1 251 ASP 251 769 769 ASP ASP A . n A 1 252 GLU 252 770 770 GLU GLU A . n A 1 253 ASN 253 771 771 ASN ASN A . n A 1 254 GLU 254 772 772 GLU GLU A . n A 1 255 LEU 255 773 773 LEU LEU A . n A 1 256 GLU 256 774 774 GLU GLU A . n A 1 257 LEU 257 775 775 LEU LEU A . n A 1 258 LEU 258 776 776 LEU LEU A . n A 1 259 MET 259 777 777 MET MET A . n A 1 260 CYS 260 778 778 CYS CYS A . n A 1 261 GLY 261 779 779 GLY GLY A . n A 1 262 LEU 262 780 780 LEU LEU A . n A 1 263 GLY 263 781 781 GLY GLY A . n A 1 264 ASP 264 782 782 ASP ASP A . n A 1 265 VAL 265 783 783 VAL VAL A . n A 1 266 ASP 266 784 784 ASP ASP A . n A 1 267 VAL 267 785 785 VAL VAL A . n A 1 268 ASN 268 786 786 ASN ASN A . n A 1 269 ASP 269 787 787 ASP ASP A . n A 1 270 TRP 270 788 788 TRP TRP A . n A 1 271 ARG 271 789 789 ARG ARG A . n A 1 272 GLU 272 790 790 GLU GLU A . n A 1 273 HIS 273 791 791 HIS HIS A . n A 1 274 THR 274 792 792 THR THR A . n A 1 275 LYS 275 793 793 LYS LYS A . n A 1 276 TYR 276 794 794 TYR TYR A . n A 1 277 LYS 277 795 795 LYS LYS A . n A 1 278 ASN 278 796 796 ASN ASN A . n A 1 279 GLY 279 797 797 GLY GLY A . n A 1 280 TYR 280 798 798 TYR TYR A . n A 1 281 SER 281 799 799 SER SER A . n A 1 282 ALA 282 800 800 ALA ALA A . n A 1 283 ASN 283 801 801 ASN ASN A . n A 1 284 HIS 284 802 802 HIS HIS A . n A 1 285 GLN 285 803 803 GLN GLN A . n A 1 286 VAL 286 804 804 VAL VAL A . n A 1 287 ILE 287 805 805 ILE ILE A . n A 1 288 GLN 288 806 806 GLN GLN A . n A 1 289 TRP 289 807 807 TRP TRP A . n A 1 290 PHE 290 808 808 PHE PHE A . n A 1 291 TRP 291 809 809 TRP TRP A . n A 1 292 LYS 292 810 810 LYS LYS A . n A 1 293 ALA 293 811 811 ALA ALA A . n A 1 294 VAL 294 812 812 VAL VAL A . n A 1 295 LEU 295 813 813 LEU LEU A . n A 1 296 MET 296 814 814 MET MET A . n A 1 297 MET 297 815 815 MET MET A . n A 1 298 ASP 298 816 816 ASP ASP A . n A 1 299 SER 299 817 817 SER SER A . n A 1 300 GLU 300 818 818 GLU GLU A . n A 1 301 LYS 301 819 819 LYS LYS A . n A 1 302 ARG 302 820 820 ARG ARG A . n A 1 303 ILE 303 821 821 ILE ILE A . n A 1 304 ARG 304 822 822 ARG ARG A . n A 1 305 LEU 305 823 823 LEU LEU A . n A 1 306 LEU 306 824 824 LEU LEU A . n A 1 307 GLN 307 825 825 GLN GLN A . n A 1 308 PHE 308 826 826 PHE PHE A . n A 1 309 VAL 309 827 827 VAL VAL A . n A 1 310 THR 310 828 828 THR THR A . n A 1 311 GLY 311 829 829 GLY GLY A . n A 1 312 THR 312 830 830 THR THR A . n A 1 313 SER 313 831 831 SER SER A . n A 1 314 ARG 314 832 832 ARG ARG A . n A 1 315 VAL 315 833 833 VAL VAL A . n A 1 316 PRO 316 834 834 PRO PRO A . n A 1 317 MET 317 835 835 MET MET A . n A 1 318 ASN 318 836 836 ASN ASN A . n A 1 319 GLY 319 837 837 GLY GLY A . n A 1 320 PHE 320 838 838 PHE PHE A . n A 1 321 ALA 321 839 839 ALA ALA A . n A 1 322 GLU 322 840 840 GLU GLU A . n A 1 323 LEU 323 841 841 LEU LEU A . n A 1 324 TYR 324 842 842 TYR TYR A . n A 1 325 GLY 325 843 843 GLY GLY A . n A 1 326 SER 326 844 844 SER SER A . n A 1 327 ASN 327 845 845 ASN ASN A . n A 1 328 GLY 328 846 846 GLY GLY A . n A 1 329 PRO 329 847 847 PRO PRO A . n A 1 330 GLN 330 848 848 GLN GLN A . n A 1 331 SER 331 849 849 SER SER A . n A 1 332 PHE 332 850 850 PHE PHE A . n A 1 333 THR 333 851 851 THR THR A . n A 1 334 VAL 334 852 852 VAL VAL A . n A 1 335 GLU 335 853 853 GLU GLU A . n A 1 336 GLN 336 854 854 GLN GLN A . n A 1 337 TRP 337 855 855 TRP TRP A . n A 1 338 GLY 338 856 856 GLY GLY A . n A 1 339 THR 339 857 857 THR THR A . n A 1 340 PRO 340 858 858 PRO PRO A . n A 1 341 GLU 341 859 859 GLU GLU A . n A 1 342 LYS 342 860 860 LYS LYS A . n A 1 343 LEU 343 861 861 LEU LEU A . n A 1 344 PRO 344 862 862 PRO PRO A . n A 1 345 ARG 345 863 863 ARG ARG A . n A 1 346 ALA 346 864 864 ALA ALA A . n A 1 347 HIS 347 865 865 HIS HIS A . n A 1 348 THR 348 866 866 THR THR A . n A 1 349 CYS 349 867 867 CYS CYS A . n A 1 350 PHE 350 868 868 PHE PHE A . n A 1 351 ASN 351 869 869 ASN ASN A . n A 1 352 ARG 352 870 870 ARG ARG A . n A 1 353 LEU 353 871 871 LEU LEU A . n A 1 354 ASP 354 872 872 ASP ASP A . n A 1 355 LEU 355 873 873 LEU LEU A . n A 1 356 PRO 356 874 874 PRO PRO A . n A 1 357 PRO 357 875 875 PRO PRO A . n A 1 358 TYR 358 876 876 TYR TYR A . n A 1 359 GLU 359 877 877 GLU GLU A . n A 1 360 SER 360 878 878 SER SER A . n A 1 361 PHE 361 879 879 PHE PHE A . n A 1 362 GLU 362 880 880 GLU GLU A . n A 1 363 GLU 363 881 881 GLU GLU A . n A 1 364 LEU 364 882 882 LEU LEU A . n A 1 365 TRP 365 883 883 TRP TRP A . n A 1 366 ASP 366 884 884 ASP ASP A . n A 1 367 LYS 367 885 885 LYS LYS A . n A 1 368 LEU 368 886 886 LEU LEU A . n A 1 369 GLN 369 887 887 GLN GLN A . n A 1 370 MET 370 888 888 MET MET A . n A 1 371 ALA 371 889 889 ALA ALA A . n A 1 372 ILE 372 890 890 ILE ILE A . n A 1 373 GLU 373 891 891 GLU GLU A . n A 1 374 ASN 374 892 892 ASN ASN A . n A 1 375 THR 375 893 893 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4YU 1 901 1 4YU XXX A . C 3 HOH 1 1001 5 HOH HOH A . C 3 HOH 2 1002 3 HOH HOH A . C 3 HOH 3 1003 4 HOH HOH A . C 3 HOH 4 1004 1 HOH HOH A . C 3 HOH 5 1005 2 HOH HOH A . C 3 HOH 6 1006 7 HOH HOH A . C 3 HOH 7 1007 6 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-30 2 'Structure model' 1 1 2018-04-25 3 'Structure model' 1 2 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_struct_oper_list 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_CSD' 3 2 'Structure model' '_citation.journal_volume' 4 2 'Structure model' '_citation.page_first' 5 2 'Structure model' '_citation.page_last' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation_author.name' 9 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 10 3 'Structure model' '_database_2.pdbx_DOI' 11 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details 'Chain A' _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -22.8336 _pdbx_refine_tls.origin_y -2.3324 _pdbx_refine_tls.origin_z 8.9346 _pdbx_refine_tls.T[1][1] 0.2319 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0084 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0556 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0077 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0011 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0293 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.0864 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.0248 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.0193 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.3101 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.0308 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.0107 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0198 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0234 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0054 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0345 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0206 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0608 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0302 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0024 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0008 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 519 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 893 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? 0.3.6.3 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 538 ? ? -74.05 49.89 2 1 VAL A 677 ? ? -95.60 -63.40 3 1 VAL A 742 ? ? -137.19 -59.18 4 1 ARG A 832 ? ? 170.19 80.57 5 1 ASN A 836 ? ? 84.83 7.88 6 1 GLN A 848 ? ? -162.34 105.54 7 1 ASN A 869 ? ? 34.54 63.34 8 1 GLU A 891 ? ? -66.91 85.35 9 1 ASN A 892 ? ? -156.85 -55.05 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4YU O3 O N N 1 4YU C4 C N N 2 4YU C5 C N N 3 4YU C6 C Y N 4 4YU N1 N Y N 5 4YU C7 C Y N 6 4YU C8 C N N 7 4YU C9 C N N 8 4YU C10 C Y N 9 4YU C11 C Y N 10 4YU C12 C Y N 11 4YU C13 C Y N 12 4YU C14 C N N 13 4YU C15 C Y N 14 4YU O1 O N N 15 4YU C1 C N N 16 4YU O O N N 17 4YU C C N N 18 4YU C2 C N N 19 4YU C3 C N N 20 4YU N N N N 21 4YU O2 O N N 22 4YU C16 C Y N 23 4YU H1 H N N 24 4YU H2 H N N 25 4YU H3 H N N 26 4YU H4 H N N 27 4YU H5 H N N 28 4YU H6 H N N 29 4YU H7 H N N 30 4YU H8 H N N 31 4YU H9 H N N 32 4YU H10 H N N 33 4YU H11 H N N 34 4YU H12 H N N 35 4YU H13 H N N 36 4YU H14 H N N 37 4YU H15 H N N 38 4YU H16 H N N 39 4YU H17 H N N 40 4YU H18 H N N 41 4YU H20 H N N 42 4YU H22 H N N 43 ALA N N N N 44 ALA CA C N S 45 ALA C C N N 46 ALA O O N N 47 ALA CB C N N 48 ALA OXT O N N 49 ALA H H N N 50 ALA H2 H N N 51 ALA HA H N N 52 ALA HB1 H N N 53 ALA HB2 H N N 54 ALA HB3 H N N 55 ALA HXT H N N 56 ARG N N N N 57 ARG CA C N S 58 ARG C C N N 59 ARG O O N N 60 ARG CB C N N 61 ARG CG C N N 62 ARG CD C N N 63 ARG NE N N N 64 ARG CZ C N N 65 ARG NH1 N N N 66 ARG NH2 N N N 67 ARG OXT O N N 68 ARG H H N N 69 ARG H2 H N N 70 ARG HA H N N 71 ARG HB2 H N N 72 ARG HB3 H N N 73 ARG HG2 H N N 74 ARG HG3 H N N 75 ARG HD2 H N N 76 ARG HD3 H N N 77 ARG HE H N N 78 ARG HH11 H N N 79 ARG HH12 H N N 80 ARG HH21 H N N 81 ARG HH22 H N N 82 ARG HXT H N N 83 ASN N N N N 84 ASN CA C N S 85 ASN C C N N 86 ASN O O N N 87 ASN CB C N N 88 ASN CG C N N 89 ASN OD1 O N N 90 ASN ND2 N N N 91 ASN OXT O N N 92 ASN H H N N 93 ASN H2 H N N 94 ASN HA H N N 95 ASN HB2 H N N 96 ASN HB3 H N N 97 ASN HD21 H N N 98 ASN HD22 H N N 99 ASN HXT H N N 100 ASP N N N N 101 ASP CA C N S 102 ASP C C N N 103 ASP O O N N 104 ASP CB C N N 105 ASP CG C N N 106 ASP OD1 O N N 107 ASP OD2 O N N 108 ASP OXT O N N 109 ASP H H N N 110 ASP H2 H N N 111 ASP HA H N N 112 ASP HB2 H N N 113 ASP HB3 H N N 114 ASP HD2 H N N 115 ASP HXT H N N 116 CYS N N N N 117 CYS CA C N R 118 CYS C C N N 119 CYS O O N N 120 CYS CB C N N 121 CYS SG S N N 122 CYS OXT O N N 123 CYS H H N N 124 CYS H2 H N N 125 CYS HA H N N 126 CYS HB2 H N N 127 CYS HB3 H N N 128 CYS HG H N N 129 CYS HXT H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4YU C9 N1 sing N N 1 4YU C8 C7 sing N N 2 4YU N1 C7 sing Y N 3 4YU N1 C10 sing Y N 4 4YU C7 C6 doub Y N 5 4YU C10 C11 doub Y N 6 4YU C10 C16 sing Y N 7 4YU C11 C12 sing Y N 8 4YU O2 C5 doub N N 9 4YU C6 C16 sing Y N 10 4YU C6 C5 sing N N 11 4YU C16 C15 doub Y N 12 4YU C12 C13 doub Y N 13 4YU C5 N sing N N 14 4YU C15 C13 sing Y N 15 4YU C13 O3 sing N N 16 4YU N C4 sing N N 17 4YU O3 C14 sing N N 18 4YU C4 C3 sing N N 19 4YU C3 C2 doub N E 20 4YU C2 C1 sing N N 21 4YU C1 O1 doub N N 22 4YU C1 O sing N N 23 4YU O C sing N N 24 4YU C4 H1 sing N N 25 4YU C4 H2 sing N N 26 4YU C8 H3 sing N N 27 4YU C8 H4 sing N N 28 4YU C8 H5 sing N N 29 4YU C9 H6 sing N N 30 4YU C9 H7 sing N N 31 4YU C9 H8 sing N N 32 4YU C11 H9 sing N N 33 4YU C12 H10 sing N N 34 4YU C14 H11 sing N N 35 4YU C14 H12 sing N N 36 4YU C14 H13 sing N N 37 4YU C15 H14 sing N N 38 4YU C H15 sing N N 39 4YU C H16 sing N N 40 4YU C H17 sing N N 41 4YU C2 H18 sing N N 42 4YU C3 H20 sing N N 43 4YU N H22 sing N N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 ILE N CA sing N N 196 ILE N H sing N N 197 ILE N H2 sing N N 198 ILE CA C sing N N 199 ILE CA CB sing N N 200 ILE CA HA sing N N 201 ILE C O doub N N 202 ILE C OXT sing N N 203 ILE CB CG1 sing N N 204 ILE CB CG2 sing N N 205 ILE CB HB sing N N 206 ILE CG1 CD1 sing N N 207 ILE CG1 HG12 sing N N 208 ILE CG1 HG13 sing N N 209 ILE CG2 HG21 sing N N 210 ILE CG2 HG22 sing N N 211 ILE CG2 HG23 sing N N 212 ILE CD1 HD11 sing N N 213 ILE CD1 HD12 sing N N 214 ILE CD1 HD13 sing N N 215 ILE OXT HXT sing N N 216 LEU N CA sing N N 217 LEU N H sing N N 218 LEU N H2 sing N N 219 LEU CA C sing N N 220 LEU CA CB sing N N 221 LEU CA HA sing N N 222 LEU C O doub N N 223 LEU C OXT sing N N 224 LEU CB CG sing N N 225 LEU CB HB2 sing N N 226 LEU CB HB3 sing N N 227 LEU CG CD1 sing N N 228 LEU CG CD2 sing N N 229 LEU CG HG sing N N 230 LEU CD1 HD11 sing N N 231 LEU CD1 HD12 sing N N 232 LEU CD1 HD13 sing N N 233 LEU CD2 HD21 sing N N 234 LEU CD2 HD22 sing N N 235 LEU CD2 HD23 sing N N 236 LEU OXT HXT sing N N 237 LYS N CA sing N N 238 LYS N H sing N N 239 LYS N H2 sing N N 240 LYS CA C sing N N 241 LYS CA CB sing N N 242 LYS CA HA sing N N 243 LYS C O doub N N 244 LYS C OXT sing N N 245 LYS CB CG sing N N 246 LYS CB HB2 sing N N 247 LYS CB HB3 sing N N 248 LYS CG CD sing N N 249 LYS CG HG2 sing N N 250 LYS CG HG3 sing N N 251 LYS CD CE sing N N 252 LYS CD HD2 sing N N 253 LYS CD HD3 sing N N 254 LYS CE NZ sing N N 255 LYS CE HE2 sing N N 256 LYS CE HE3 sing N N 257 LYS NZ HZ1 sing N N 258 LYS NZ HZ2 sing N N 259 LYS NZ HZ3 sing N N 260 LYS OXT HXT sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TRP N CA sing N N 350 TRP N H sing N N 351 TRP N H2 sing N N 352 TRP CA C sing N N 353 TRP CA CB sing N N 354 TRP CA HA sing N N 355 TRP C O doub N N 356 TRP C OXT sing N N 357 TRP CB CG sing N N 358 TRP CB HB2 sing N N 359 TRP CB HB3 sing N N 360 TRP CG CD1 doub Y N 361 TRP CG CD2 sing Y N 362 TRP CD1 NE1 sing Y N 363 TRP CD1 HD1 sing N N 364 TRP CD2 CE2 doub Y N 365 TRP CD2 CE3 sing Y N 366 TRP NE1 CE2 sing Y N 367 TRP NE1 HE1 sing N N 368 TRP CE2 CZ2 sing Y N 369 TRP CE3 CZ3 doub Y N 370 TRP CE3 HE3 sing N N 371 TRP CZ2 CH2 doub Y N 372 TRP CZ2 HZ2 sing N N 373 TRP CZ3 CH2 sing Y N 374 TRP CZ3 HZ3 sing N N 375 TRP CH2 HH2 sing N N 376 TRP OXT HXT sing N N 377 TYR N CA sing N N 378 TYR N H sing N N 379 TYR N H2 sing N N 380 TYR CA C sing N N 381 TYR CA CB sing N N 382 TYR CA HA sing N N 383 TYR C O doub N N 384 TYR C OXT sing N N 385 TYR CB CG sing N N 386 TYR CB HB2 sing N N 387 TYR CB HB3 sing N N 388 TYR CG CD1 doub Y N 389 TYR CG CD2 sing Y N 390 TYR CD1 CE1 sing Y N 391 TYR CD1 HD1 sing N N 392 TYR CD2 CE2 doub Y N 393 TYR CD2 HD2 sing N N 394 TYR CE1 CZ doub Y N 395 TYR CE1 HE1 sing N N 396 TYR CE2 CZ sing Y N 397 TYR CE2 HE2 sing N N 398 TYR CZ OH sing N N 399 TYR OH HH sing N N 400 TYR OXT HXT sing N N 401 VAL N CA sing N N 402 VAL N H sing N N 403 VAL N H2 sing N N 404 VAL CA C sing N N 405 VAL CA CB sing N N 406 VAL CA HA sing N N 407 VAL C O doub N N 408 VAL C OXT sing N N 409 VAL CB CG1 sing N N 410 VAL CB CG2 sing N N 411 VAL CB HB sing N N 412 VAL CG1 HG11 sing N N 413 VAL CG1 HG12 sing N N 414 VAL CG1 HG13 sing N N 415 VAL CG2 HG21 sing N N 416 VAL CG2 HG22 sing N N 417 VAL CG2 HG23 sing N N 418 VAL OXT HXT sing N N 419 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'methyl (2E)-4-{[(5-methoxy-1,2-dimethyl-1H-indol-3-yl)carbonyl]amino}but-2-enoate' 4YU 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2XBF _pdbx_initial_refinement_model.details ? #