HEADER TRANSCRIPTION 29-JUN-15 5CAM TITLE CRYSTAL STRUCTURE OF THE CYTOPLASMIC DOMAIN OF THE PSEUDOMONAS PUTIDA TITLE 2 ANTI-SIGMA FACTOR PUPR (SEMET) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUPR PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 1-82; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 STRAIN: LOC5358; SOURCE 5 GENE: PUPR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMBP-PARALLEL-1 KEYWDS BACTERIAL PROTEINS, MEMBRANE PROTEINS, CYTOPLASM, SIGMA FACTOR, KEYWDS 2 TRANSCRIPTION FACTORS, GENE EXPRESSION REGULATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.L.JENSEN,C.L.COLBERT REVDAT 4 25-DEC-19 5CAM 1 REMARK REVDAT 3 20-SEP-17 5CAM 1 JRNL REMARK REVDAT 2 28-OCT-15 5CAM 1 JRNL REVDAT 1 09-SEP-15 5CAM 0 JRNL AUTH J.L.JENSEN,A.BALBO,D.B.NEAU,S.CHAKRAVARTHY,H.ZHAO,S.C.SINHA, JRNL AUTH 2 C.L.COLBERT JRNL TITL MECHANISTIC IMPLICATIONS OF THE UNIQUE STRUCTURAL FEATURES JRNL TITL 2 AND DIMERIZATION OF THE CYTOPLASMIC DOMAIN OF THE JRNL TITL 3 PSEUDOMONAS SIGMA REGULATOR, PUPR. JRNL REF BIOCHEMISTRY V. 54 5867 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 26313375 JRNL DOI 10.1021/ACS.BIOCHEM.5B00826 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 14172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 67.3779 - 4.6759 0.99 1340 153 0.1700 0.1918 REMARK 3 2 4.6759 - 3.7115 1.00 1345 152 0.1381 0.1783 REMARK 3 3 3.7115 - 3.2423 1.00 1356 147 0.1630 0.2309 REMARK 3 4 3.2423 - 2.9459 1.00 1332 150 0.1847 0.2130 REMARK 3 5 2.9459 - 2.7347 1.00 1338 154 0.1826 0.2362 REMARK 3 6 2.7347 - 2.5735 0.99 1326 142 0.1774 0.1854 REMARK 3 7 2.5735 - 2.4446 0.98 1322 149 0.1894 0.2098 REMARK 3 8 2.4446 - 2.3382 0.97 1278 144 0.2148 0.2715 REMARK 3 9 2.3382 - 2.2482 0.91 1221 141 0.2809 0.3062 REMARK 3 10 2.2482 - 2.1706 0.66 880 102 0.3411 0.4393 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 1971 REMARK 3 ANGLE : 1.511 2687 REMARK 3 CHIRALITY : 0.077 275 REMARK 3 PLANARITY : 0.009 352 REMARK 3 DIHEDRAL : 17.928 719 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1704 23.7599 4.1397 REMARK 3 T TENSOR REMARK 3 T11: 1.2444 T22: 0.3845 REMARK 3 T33: 0.8334 T12: -0.1247 REMARK 3 T13: -0.1440 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 9.4472 L22: 8.5947 REMARK 3 L33: 4.0786 L12: 2.9641 REMARK 3 L13: 3.2683 L23: 5.7757 REMARK 3 S TENSOR REMARK 3 S11: -0.1817 S12: 0.0062 S13: 1.1464 REMARK 3 S21: 1.0378 S22: 0.0590 S23: -1.2627 REMARK 3 S31: -1.1987 S32: 0.7933 S33: -0.2818 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2484 16.7914 -7.3064 REMARK 3 T TENSOR REMARK 3 T11: 0.9559 T22: 0.5631 REMARK 3 T33: 0.6239 T12: -0.2012 REMARK 3 T13: 0.2308 T23: -0.0609 REMARK 3 L TENSOR REMARK 3 L11: 6.9701 L22: 4.3167 REMARK 3 L33: 6.4207 L12: 4.8985 REMARK 3 L13: 1.9068 L23: -0.7117 REMARK 3 S TENSOR REMARK 3 S11: -0.2704 S12: 1.2329 S13: 0.4120 REMARK 3 S21: -0.9959 S22: 0.5472 S23: -1.4213 REMARK 3 S31: -1.9612 S32: 0.6260 S33: -0.0995 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0303 14.0237 6.3149 REMARK 3 T TENSOR REMARK 3 T11: 1.0184 T22: 0.2687 REMARK 3 T33: 0.6477 T12: 0.0055 REMARK 3 T13: 0.0551 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 6.5678 L22: 2.1868 REMARK 3 L33: 0.9057 L12: -1.0668 REMARK 3 L13: -1.1548 L23: 1.3781 REMARK 3 S TENSOR REMARK 3 S11: -0.1092 S12: 0.0595 S13: 0.7734 REMARK 3 S21: 1.4550 S22: 0.3543 S23: 0.4551 REMARK 3 S31: -0.8726 S32: -0.2766 S33: -0.0624 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7177 27.8056 0.6108 REMARK 3 T TENSOR REMARK 3 T11: 1.0423 T22: 0.3701 REMARK 3 T33: 0.8822 T12: -0.0895 REMARK 3 T13: 0.0390 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 8.7376 L22: 4.4301 REMARK 3 L33: 5.9596 L12: -2.6145 REMARK 3 L13: 3.1682 L23: 2.9881 REMARK 3 S TENSOR REMARK 3 S11: -0.9868 S12: 0.3100 S13: 0.3843 REMARK 3 S21: 1.3104 S22: -0.3208 S23: 1.1131 REMARK 3 S31: -0.6692 S32: -0.0051 S33: 1.1493 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8261 40.1242 1.3330 REMARK 3 T TENSOR REMARK 3 T11: 1.0676 T22: 0.4220 REMARK 3 T33: 0.8029 T12: -0.0218 REMARK 3 T13: -0.0550 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 5.8565 L22: 3.7010 REMARK 3 L33: 5.0197 L12: -3.2592 REMARK 3 L13: 1.6488 L23: -3.5499 REMARK 3 S TENSOR REMARK 3 S11: -0.0863 S12: 0.0923 S13: -0.1419 REMARK 3 S21: 0.0383 S22: 0.4394 S23: 1.6044 REMARK 3 S31: 0.9470 S32: -0.9285 S33: -0.1565 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8101 40.1755 3.6241 REMARK 3 T TENSOR REMARK 3 T11: 0.9459 T22: 0.3382 REMARK 3 T33: 0.6239 T12: -0.0645 REMARK 3 T13: -0.1329 T23: 0.0520 REMARK 3 L TENSOR REMARK 3 L11: 7.3895 L22: 5.5628 REMARK 3 L33: 2.5335 L12: -0.5693 REMARK 3 L13: -2.4707 L23: -2.2535 REMARK 3 S TENSOR REMARK 3 S11: -0.5630 S12: -0.3874 S13: 0.0756 REMARK 3 S21: 1.5767 S22: 0.1770 S23: -1.1116 REMARK 3 S31: 0.4296 S32: 0.1830 S33: 0.4469 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 7 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7731 65.7640 0.6394 REMARK 3 T TENSOR REMARK 3 T11: 0.2055 T22: 0.5001 REMARK 3 T33: 0.3350 T12: 0.0112 REMARK 3 T13: -0.0083 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 5.0515 L22: 4.7450 REMARK 3 L33: 2.9196 L12: -0.7220 REMARK 3 L13: -1.1732 L23: 0.0918 REMARK 3 S TENSOR REMARK 3 S11: 0.0890 S12: 0.5818 S13: 0.0616 REMARK 3 S21: 0.0642 S22: 0.0075 S23: 0.8405 REMARK 3 S31: -0.1677 S32: -1.6392 S33: 0.0009 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 31 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7405 61.0834 3.8069 REMARK 3 T TENSOR REMARK 3 T11: 0.2027 T22: 0.2545 REMARK 3 T33: 0.2776 T12: 0.0747 REMARK 3 T13: -0.0610 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 4.6951 L22: 4.4040 REMARK 3 L33: 5.9719 L12: 1.5930 REMARK 3 L13: -0.2815 L23: 0.4125 REMARK 3 S TENSOR REMARK 3 S11: 0.1330 S12: 0.1687 S13: -0.5308 REMARK 3 S21: 0.0480 S22: -0.0056 S23: -0.6187 REMARK 3 S31: 0.6234 S32: 0.2858 S33: -0.1334 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 7 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2733 62.0803 -1.1552 REMARK 3 T TENSOR REMARK 3 T11: 0.1782 T22: 0.3626 REMARK 3 T33: 0.3324 T12: 0.0096 REMARK 3 T13: -0.0088 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 5.3276 L22: 6.0793 REMARK 3 L33: 8.2547 L12: 0.6821 REMARK 3 L13: -1.2687 L23: 1.0260 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.5617 S13: -0.1687 REMARK 3 S21: 0.1871 S22: -0.0016 S23: 0.2565 REMARK 3 S31: 0.3000 S32: -0.3559 S33: 0.0503 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 45 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2321 73.4026 -4.0536 REMARK 3 T TENSOR REMARK 3 T11: 0.3696 T22: 0.2724 REMARK 3 T33: 0.3942 T12: -0.0356 REMARK 3 T13: 0.0426 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 8.4120 L22: 6.5007 REMARK 3 L33: 7.4885 L12: -3.8469 REMARK 3 L13: -2.5574 L23: 2.7775 REMARK 3 S TENSOR REMARK 3 S11: 0.0765 S12: -0.6859 S13: 1.0655 REMARK 3 S21: -0.0043 S22: 0.2553 S23: 0.1652 REMARK 3 S31: -1.2683 S32: 0.2759 S33: -0.3828 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CAM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14546 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 134.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BIS-TRIS PH 6.0, 3M NACL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 67.34550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MSE A -1 REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 ALA A 6 REMARK 465 THR A 7 REMARK 465 SER A 8 REMARK 465 ILE A 9 REMARK 465 PRO A 10 REMARK 465 SER A 66 REMARK 465 PRO A 67 REMARK 465 GLY A 68 REMARK 465 GLN A 69 REMARK 465 ARG A 70 REMARK 465 PRO A 71 REMARK 465 LEU A 72 REMARK 465 ALA A 73 REMARK 465 HIS A 74 REMARK 465 ALA A 75 REMARK 465 ALA A 76 REMARK 465 LEU A 77 REMARK 465 ARG A 78 REMARK 465 PRO A 79 REMARK 465 GLN A 80 REMARK 465 GLN A 81 REMARK 465 SER A 82 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 MSE B -1 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 3 REMARK 465 GLN B 4 REMARK 465 GLY B 5 REMARK 465 ALA B 6 REMARK 465 THR B 7 REMARK 465 SER B 8 REMARK 465 ILE B 9 REMARK 465 PRO B 10 REMARK 465 ARG B 65 REMARK 465 SER B 66 REMARK 465 PRO B 67 REMARK 465 GLY B 68 REMARK 465 GLN B 69 REMARK 465 ARG B 70 REMARK 465 PRO B 71 REMARK 465 LEU B 72 REMARK 465 ALA B 73 REMARK 465 HIS B 74 REMARK 465 ALA B 75 REMARK 465 ALA B 76 REMARK 465 LEU B 77 REMARK 465 ARG B 78 REMARK 465 PRO B 79 REMARK 465 GLN B 80 REMARK 465 GLN B 81 REMARK 465 SER B 82 REMARK 465 GLY C -3 REMARK 465 ALA C -2 REMARK 465 MSE C -1 REMARK 465 GLY C 0 REMARK 465 MSE C 1 REMARK 465 ASN C 2 REMARK 465 GLY C 3 REMARK 465 GLN C 4 REMARK 465 GLY C 5 REMARK 465 ALA C 6 REMARK 465 SER C 66 REMARK 465 PRO C 67 REMARK 465 GLY C 68 REMARK 465 GLN C 69 REMARK 465 ARG C 70 REMARK 465 PRO C 71 REMARK 465 LEU C 72 REMARK 465 ALA C 73 REMARK 465 HIS C 74 REMARK 465 ALA C 75 REMARK 465 ALA C 76 REMARK 465 LEU C 77 REMARK 465 ARG C 78 REMARK 465 PRO C 79 REMARK 465 GLN C 80 REMARK 465 GLN C 81 REMARK 465 SER C 82 REMARK 465 GLY D -3 REMARK 465 ALA D -2 REMARK 465 MSE D -1 REMARK 465 GLY D 0 REMARK 465 MSE D 1 REMARK 465 ASN D 2 REMARK 465 GLY D 3 REMARK 465 GLN D 4 REMARK 465 GLY D 5 REMARK 465 ALA D 6 REMARK 465 SER D 66 REMARK 465 PRO D 67 REMARK 465 GLY D 68 REMARK 465 GLN D 69 REMARK 465 ARG D 70 REMARK 465 PRO D 71 REMARK 465 LEU D 72 REMARK 465 ALA D 73 REMARK 465 HIS D 74 REMARK 465 ALA D 75 REMARK 465 ALA D 76 REMARK 465 LEU D 77 REMARK 465 ARG D 78 REMARK 465 PRO D 79 REMARK 465 GLN D 80 REMARK 465 GLN D 81 REMARK 465 SER D 82 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 12 CD OE1 OE2 REMARK 480 SER A 39 OG REMARK 480 LEU A 46 CG CD1 CD2 REMARK 480 HIS A 49 ND1 CD2 CE1 NE2 REMARK 480 ARG A 53 CZ NH1 NH2 REMARK 480 GLN A 59 CD OE1 NE2 REMARK 480 ARG A 60 CD NE CZ NH1 NH2 REMARK 480 ARG A 62 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU A 63 CD OE1 OE2 REMARK 480 MSE A 64 O REMARK 480 ARG A 65 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU B 12 CG CD OE1 OE2 REMARK 480 GLU B 15 OE1 OE2 REMARK 480 GLU B 23 OE1 OE2 REMARK 480 LEU B 46 CG CD1 CD2 REMARK 480 HIS B 49 CG ND1 CD2 CE1 NE2 REMARK 480 GLN B 59 CD OE1 NE2 REMARK 480 ARG B 60 CD NE CZ NH1 NH2 REMARK 480 ARG B 62 CG CD NE CZ NH1 REMARK 480 GLU B 63 CG CD OE1 OE2 REMARK 480 GLU C 12 CG CD OE1 OE2 REMARK 480 GLU C 15 CD OE1 OE2 REMARK 480 GLN C 59 CD OE1 NE2 REMARK 480 GLU C 63 OE1 OE2 REMARK 480 GLU D 12 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 133 O HOH C 137 1.86 REMARK 500 O THR C 7 O HOH C 101 2.05 REMARK 500 NH1 ARG D 53 O HOH D 101 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 28 55.33 -96.62 REMARK 500 GLU B 63 -2.08 -58.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 146 DISTANCE = 5.91 ANGSTROMS DBREF 5CAM A 1 82 UNP Q52209 Q52209_PSEPU 1 82 DBREF 5CAM B 1 82 UNP Q52209 Q52209_PSEPU 1 82 DBREF 5CAM C 1 82 UNP Q52209 Q52209_PSEPU 1 82 DBREF 5CAM D 1 82 UNP Q52209 Q52209_PSEPU 1 82 SEQADV 5CAM GLY A -3 UNP Q52209 EXPRESSION TAG SEQADV 5CAM ALA A -2 UNP Q52209 EXPRESSION TAG SEQADV 5CAM MSE A -1 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY A 0 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY B -3 UNP Q52209 EXPRESSION TAG SEQADV 5CAM ALA B -2 UNP Q52209 EXPRESSION TAG SEQADV 5CAM MSE B -1 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY B 0 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY C -3 UNP Q52209 EXPRESSION TAG SEQADV 5CAM ALA C -2 UNP Q52209 EXPRESSION TAG SEQADV 5CAM MSE C -1 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY C 0 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY D -3 UNP Q52209 EXPRESSION TAG SEQADV 5CAM ALA D -2 UNP Q52209 EXPRESSION TAG SEQADV 5CAM MSE D -1 UNP Q52209 EXPRESSION TAG SEQADV 5CAM GLY D 0 UNP Q52209 EXPRESSION TAG SEQRES 1 A 86 GLY ALA MSE GLY MSE ASN GLY GLN GLY ALA THR SER ILE SEQRES 2 A 86 PRO GLY GLU VAL ALA GLU GLN ALA MSE HIS TRP HIS LEU SEQRES 3 A 86 GLU LEU GLN GLU PRO ALA VAL SER ALA ALA THR LEU ALA SEQRES 4 A 86 ALA CYS MSE SER TRP ARG GLN ALA HIS PRO LEU HIS GLU SEQRES 5 A 86 HIS ALA TRP GLN ARG THR GLN VAL PHE ALA GLN ARG LEU SEQRES 6 A 86 ARG GLU MSE ARG SER PRO GLY GLN ARG PRO LEU ALA HIS SEQRES 7 A 86 ALA ALA LEU ARG PRO GLN GLN SER SEQRES 1 B 86 GLY ALA MSE GLY MSE ASN GLY GLN GLY ALA THR SER ILE SEQRES 2 B 86 PRO GLY GLU VAL ALA GLU GLN ALA MSE HIS TRP HIS LEU SEQRES 3 B 86 GLU LEU GLN GLU PRO ALA VAL SER ALA ALA THR LEU ALA SEQRES 4 B 86 ALA CYS MSE SER TRP ARG GLN ALA HIS PRO LEU HIS GLU SEQRES 5 B 86 HIS ALA TRP GLN ARG THR GLN VAL PHE ALA GLN ARG LEU SEQRES 6 B 86 ARG GLU MSE ARG SER PRO GLY GLN ARG PRO LEU ALA HIS SEQRES 7 B 86 ALA ALA LEU ARG PRO GLN GLN SER SEQRES 1 C 86 GLY ALA MSE GLY MSE ASN GLY GLN GLY ALA THR SER ILE SEQRES 2 C 86 PRO GLY GLU VAL ALA GLU GLN ALA MSE HIS TRP HIS LEU SEQRES 3 C 86 GLU LEU GLN GLU PRO ALA VAL SER ALA ALA THR LEU ALA SEQRES 4 C 86 ALA CYS MSE SER TRP ARG GLN ALA HIS PRO LEU HIS GLU SEQRES 5 C 86 HIS ALA TRP GLN ARG THR GLN VAL PHE ALA GLN ARG LEU SEQRES 6 C 86 ARG GLU MSE ARG SER PRO GLY GLN ARG PRO LEU ALA HIS SEQRES 7 C 86 ALA ALA LEU ARG PRO GLN GLN SER SEQRES 1 D 86 GLY ALA MSE GLY MSE ASN GLY GLN GLY ALA THR SER ILE SEQRES 2 D 86 PRO GLY GLU VAL ALA GLU GLN ALA MSE HIS TRP HIS LEU SEQRES 3 D 86 GLU LEU GLN GLU PRO ALA VAL SER ALA ALA THR LEU ALA SEQRES 4 D 86 ALA CYS MSE SER TRP ARG GLN ALA HIS PRO LEU HIS GLU SEQRES 5 D 86 HIS ALA TRP GLN ARG THR GLN VAL PHE ALA GLN ARG LEU SEQRES 6 D 86 ARG GLU MSE ARG SER PRO GLY GLN ARG PRO LEU ALA HIS SEQRES 7 D 86 ALA ALA LEU ARG PRO GLN GLN SER MODRES 5CAM MSE A 18 MET MODIFIED RESIDUE MODRES 5CAM MSE A 38 MET MODIFIED RESIDUE MODRES 5CAM MSE A 64 MET MODIFIED RESIDUE MODRES 5CAM MSE B 18 MET MODIFIED RESIDUE MODRES 5CAM MSE B 38 MET MODIFIED RESIDUE MODRES 5CAM MSE B 64 MET MODIFIED RESIDUE MODRES 5CAM MSE C 18 MET MODIFIED RESIDUE MODRES 5CAM MSE C 38 MET MODIFIED RESIDUE MODRES 5CAM MSE C 64 MET MODIFIED RESIDUE MODRES 5CAM MSE D 18 MET MODIFIED RESIDUE MODRES 5CAM MSE D 38 MET MODIFIED RESIDUE MODRES 5CAM MSE D 64 MET MODIFIED RESIDUE HET MSE A 18 17 HET MSE A 38 34 HET MSE A 64 17 HET MSE B 18 17 HET MSE B 38 34 HET MSE B 64 17 HET MSE C 18 17 HET MSE C 38 17 HET MSE C 64 17 HET MSE D 18 17 HET MSE D 38 17 HET MSE D 64 17 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 HOH *96(H2 O) HELIX 1 AA1 GLY A 11 LEU A 24 1 14 HELIX 2 AA2 SER A 30 HIS A 44 1 15 HELIX 3 AA3 HIS A 44 MSE A 64 1 21 HELIX 4 AA4 GLU B 12 LEU B 24 1 13 HELIX 5 AA5 SER B 30 HIS B 44 1 15 HELIX 6 AA6 HIS B 44 GLU B 63 1 20 HELIX 7 AA7 GLY C 11 LEU C 24 1 14 HELIX 8 AA8 SER C 30 HIS C 44 1 15 HELIX 9 AA9 HIS C 44 ARG C 65 1 22 HELIX 10 AB1 PRO D 10 LEU D 24 1 15 HELIX 11 AB2 ALA D 31 HIS D 44 1 14 HELIX 12 AB3 HIS D 44 ARG D 65 1 22 SHEET 1 AA1 2 SER C 8 PRO C 10 0 SHEET 2 AA1 2 ALA D 28 SER D 30 -1 O VAL D 29 N ILE C 9 LINK C ALA A 17 N MSE A 18 1555 1555 1.34 LINK C MSE A 18 N HIS A 19 1555 1555 1.33 LINK C CYS A 37 N AMSE A 38 1555 1555 1.34 LINK C CYS A 37 N BMSE A 38 1555 1555 1.32 LINK C AMSE A 38 N SER A 39 1555 1555 1.34 LINK C BMSE A 38 N SER A 39 1555 1555 1.32 LINK C GLU A 63 N MSE A 64 1555 1555 1.34 LINK C MSE A 64 N ARG A 65 1555 1555 1.33 LINK C ALA B 17 N MSE B 18 1555 1555 1.32 LINK C MSE B 18 N HIS B 19 1555 1555 1.33 LINK C CYS B 37 N AMSE B 38 1555 1555 1.33 LINK C CYS B 37 N BMSE B 38 1555 1555 1.33 LINK C AMSE B 38 N SER B 39 1555 1555 1.33 LINK C BMSE B 38 N SER B 39 1555 1555 1.33 LINK C GLU B 63 N MSE B 64 1555 1555 1.34 LINK C ALA C 17 N MSE C 18 1555 1555 1.32 LINK C MSE C 18 N HIS C 19 1555 1555 1.34 LINK C CYS C 37 N MSE C 38 1555 1555 1.32 LINK C MSE C 38 N SER C 39 1555 1555 1.32 LINK C GLU C 63 N MSE C 64 1555 1555 1.34 LINK C MSE C 64 N ARG C 65 1555 1555 1.34 LINK C ALA D 17 N MSE D 18 1555 1555 1.30 LINK C MSE D 18 N HIS D 19 1555 1555 1.32 LINK C CYS D 37 N MSE D 38 1555 1555 1.32 LINK C MSE D 38 N SER D 39 1555 1555 1.30 LINK C GLU D 63 N MSE D 64 1555 1555 1.34 LINK C MSE D 64 N ARG D 65 1555 1555 1.33 CRYST1 33.491 134.691 34.903 90.00 113.78 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029859 0.000000 0.013160 0.00000 SCALE2 0.000000 0.007424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.031310 0.00000