HEADER UNKNOWN FUNCTION 30-JUN-15 5CB0 TITLE CRYSTAL STRUCTURE AND FUNCTIONAL IMPLICATIONS OF THE TANDEM-TYPE TITLE 2 UNIVERSAL STRESS PROTEIN USPE FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNIVERSAL STRESS PROTEIN E; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: USPE, YDAA, B1333, JW1327; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS USPE, USPA SUPERFAMILY, ENTEROHEMORRHAGIC ESCHERICHIA COLI, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.XU,C.S.QUAN,X.JIN,L.JIN,J.S.KIM,J.GUO,S.FAN,N.C.HA REVDAT 3 08-NOV-23 5CB0 1 REMARK REVDAT 2 02-MAR-16 5CB0 1 JRNL REVDAT 1 10-FEB-16 5CB0 0 JRNL AUTH Y.XU,J.GUO,X.JIN,J.S.KIM,Y.JI,S.FAN,N.C.HA,C.S.QUAN JRNL TITL CRYSTAL STRUCTURE AND FUNCTIONAL IMPLICATIONS OF THE JRNL TITL 2 TANDEM-TYPE UNIVERSAL STRESS PROTEIN USPE FROM ESCHERICHIA JRNL TITL 3 COLI. JRNL REF BMC STRUCT.BIOL. V. 16 3 2016 JRNL REFN ESSN 1472-6807 JRNL PMID 26865045 JRNL DOI 10.1186/S12900-016-0053-9 REMARK 2 REMARK 2 RESOLUTION. 3.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.530 REMARK 3 COMPLETENESS FOR RANGE (%) : 46.5 REMARK 3 NUMBER OF REFLECTIONS : 13096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9622 - 6.6653 0.58 1637 185 0.2220 0.2715 REMARK 3 2 6.6653 - 5.2931 0.54 1514 169 0.2600 0.2658 REMARK 3 3 5.2931 - 4.6248 0.53 1490 165 0.2290 0.2777 REMARK 3 4 4.6248 - 4.2023 0.52 1479 165 0.2241 0.3358 REMARK 3 5 4.2023 - 3.9013 0.50 1382 153 0.2447 0.3059 REMARK 3 6 3.9013 - 3.6714 0.48 1365 152 0.2791 0.3503 REMARK 3 7 3.6714 - 3.4876 0.43 1221 136 0.2739 0.3498 REMARK 3 8 3.4876 - 3.3358 0.34 965 106 0.2774 0.3442 REMARK 3 9 3.3358 - 3.2074 0.26 730 82 0.2618 0.3409 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4776 REMARK 3 ANGLE : 1.393 6489 REMARK 3 CHIRALITY : 0.059 721 REMARK 3 PLANARITY : 0.009 841 REMARK 3 DIHEDRAL : 16.701 1791 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN REMARK 3 I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5CB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000210486. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16684 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3OLQ REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% 1.4-DIOXANE, 1.6 M AMMONIUM REMARK 280 SULFATE, 0.1 M MES (PH 6.5), EVAPORATION, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 60.56700 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 120.87250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.43625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.56700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 181.30875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 181.30875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.56700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 60.43625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 60.56700 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 120.87250 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 60.56700 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 120.87250 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 60.56700 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 181.30875 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 60.43625 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.56700 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 60.43625 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 181.30875 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 60.56700 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 60.56700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 120.87250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 204 REMARK 465 ILE A 205 REMARK 465 ALA A 206 REMARK 465 ILE A 207 REMARK 465 GLU A 208 REMARK 465 LEU A 209 REMARK 465 PRO A 210 REMARK 465 GLU A 211 REMARK 465 ARG A 273 REMARK 465 THR A 274 REMARK 465 GLY A 275 REMARK 465 ILE A 276 REMARK 465 SER A 277 REMARK 465 ALA A 278 REMARK 465 ALA A 279 REMARK 465 VAL A 308 REMARK 465 GLU A 309 REMARK 465 LEU A 310 REMARK 465 ASP A 311 REMARK 465 ASP A 312 REMARK 465 GLU A 313 REMARK 465 GLU A 314 REMARK 465 ASP A 315 REMARK 465 ASP A 316 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 VAL B 200 REMARK 465 THR B 201 REMARK 465 PRO B 202 REMARK 465 ILE B 203 REMARK 465 ASN B 204 REMARK 465 ILE B 205 REMARK 465 ALA B 206 REMARK 465 ILE B 207 REMARK 465 GLU B 208 REMARK 465 LEU B 209 REMARK 465 PRO B 210 REMARK 465 THR B 274 REMARK 465 GLY B 275 REMARK 465 ILE B 276 REMARK 465 SER B 277 REMARK 465 ALA B 278 REMARK 465 ALA B 279 REMARK 465 VAL B 308 REMARK 465 GLU B 309 REMARK 465 LEU B 310 REMARK 465 ASP B 311 REMARK 465 ASP B 312 REMARK 465 GLU B 313 REMARK 465 GLU B 314 REMARK 465 ASP B 315 REMARK 465 ASP B 316 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 60 SD REMARK 480 MET B 60 SD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 280 OE2 GLU A 286 2.02 REMARK 500 NZ LYS A 230 OG1 THR A 243 2.03 REMARK 500 OD2 ASP B 120 OE2 GLU B 123 2.09 REMARK 500 OG SER A 53 OD1 ASP A 55 2.13 REMARK 500 N SER B 53 OE2 GLU B 56 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN B 303 OE1 GLN B 303 10555 0.73 REMARK 500 CD GLN B 303 OE1 GLN B 303 10555 0.92 REMARK 500 CD GLN B 303 CD GLN B 303 10555 1.79 REMARK 500 CG GLN B 303 OE1 GLN B 303 10555 1.89 REMARK 500 OE1 GLN B 303 NE2 GLN B 303 10555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 227 CA - CB - CG ANGL. DEV. = 27.3 DEGREES REMARK 500 PRO B 301 C - N - CD ANGL. DEV. = -15.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 6 80.69 -151.82 REMARK 500 MET A 48 80.55 -67.87 REMARK 500 PRO A 54 -35.01 -39.31 REMARK 500 ARG A 95 75.89 54.26 REMARK 500 ASP A 147 47.46 -83.17 REMARK 500 VAL A 187 -76.02 -87.52 REMARK 500 HIS A 189 156.54 -48.78 REMARK 500 GLU A 240 -41.08 42.74 REMARK 500 GLU A 252 -30.26 -133.31 REMARK 500 LEU A 281 70.18 22.65 REMARK 500 ASP A 302 -158.70 -79.68 REMARK 500 ASN B 6 81.09 -152.43 REMARK 500 PRO B 54 -37.05 -37.01 REMARK 500 ASP B 120 157.86 93.31 REMARK 500 ASP B 147 48.97 -83.27 REMARK 500 VAL B 187 -75.91 -94.10 REMARK 500 ASP B 213 110.41 -172.15 REMARK 500 LEU B 227 -70.25 -47.38 REMARK 500 GLU B 252 -32.49 -130.05 REMARK 500 ASP B 302 117.13 72.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 188 HIS A 189 30.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Z6X A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Z6X B 401 DBREF 5CB0 A 1 316 UNP P0AAC0 USPE_ECOLI 1 316 DBREF 5CB0 B 1 316 UNP P0AAC0 USPE_ECOLI 1 316 SEQRES 1 A 316 MET ALA MET TYR GLN ASN MET LEU VAL VAL ILE ASP PRO SEQRES 2 A 316 ASN GLN ASP ASP GLN PRO ALA LEU ARG ARG ALA VAL TYR SEQRES 3 A 316 LEU HIS GLN ARG ILE GLY GLY LYS ILE LYS ALA PHE LEU SEQRES 4 A 316 PRO ILE TYR ASP PHE SER TYR GLU MET THR THR LEU LEU SEQRES 5 A 316 SER PRO ASP GLU ARG THR ALA MET ARG GLN GLY VAL ILE SEQRES 6 A 316 SER GLN ARG THR ALA TRP ILE HIS GLU GLN ALA LYS TYR SEQRES 7 A 316 TYR LEU ASN ALA GLY VAL PRO ILE GLU ILE LYS VAL VAL SEQRES 8 A 316 TRP HIS ASN ARG PRO PHE GLU ALA ILE ILE GLN GLU VAL SEQRES 9 A 316 ILE SER GLY GLY HIS ASP LEU VAL LEU LYS MET ALA HIS SEQRES 10 A 316 GLN HIS ASP ARG LEU GLU ALA VAL ILE PHE THR PRO THR SEQRES 11 A 316 ASP TRP HIS LEU LEU ARG LYS CYS PRO SER PRO VAL TRP SEQRES 12 A 316 MET VAL LYS ASP GLN PRO TRP PRO GLU GLY GLY LYS ALA SEQRES 13 A 316 LEU VAL ALA VAL ASN LEU ALA SER GLU GLU PRO TYR HIS SEQRES 14 A 316 ASN ALA LEU ASN GLU LYS LEU VAL LYS GLU THR ILE GLU SEQRES 15 A 316 LEU ALA GLU GLN VAL ASN HIS THR GLU VAL HIS LEU VAL SEQRES 16 A 316 GLY ALA TYR PRO VAL THR PRO ILE ASN ILE ALA ILE GLU SEQRES 17 A 316 LEU PRO GLU PHE ASP PRO SER VAL TYR ASN ASP ALA ILE SEQRES 18 A 316 ARG GLY GLN HIS LEU LEU ALA MET LYS ALA LEU ARG GLN SEQRES 19 A 316 LYS PHE GLY ILE ASN GLU ASN MET THR HIS VAL GLU LYS SEQRES 20 A 316 GLY LEU PRO GLU GLU VAL ILE PRO ASP LEU ALA GLU HIS SEQRES 21 A 316 LEU GLN ALA GLY ILE VAL VAL LEU GLY THR VAL GLY ARG SEQRES 22 A 316 THR GLY ILE SER ALA ALA PHE LEU GLY ASN THR ALA GLU SEQRES 23 A 316 GLN VAL ILE ASP HIS LEU ARG CYS ASP LEU LEU VAL ILE SEQRES 24 A 316 LYS PRO ASP GLN TYR GLN THR PRO VAL GLU LEU ASP ASP SEQRES 25 A 316 GLU GLU ASP ASP SEQRES 1 B 316 MET ALA MET TYR GLN ASN MET LEU VAL VAL ILE ASP PRO SEQRES 2 B 316 ASN GLN ASP ASP GLN PRO ALA LEU ARG ARG ALA VAL TYR SEQRES 3 B 316 LEU HIS GLN ARG ILE GLY GLY LYS ILE LYS ALA PHE LEU SEQRES 4 B 316 PRO ILE TYR ASP PHE SER TYR GLU MET THR THR LEU LEU SEQRES 5 B 316 SER PRO ASP GLU ARG THR ALA MET ARG GLN GLY VAL ILE SEQRES 6 B 316 SER GLN ARG THR ALA TRP ILE HIS GLU GLN ALA LYS TYR SEQRES 7 B 316 TYR LEU ASN ALA GLY VAL PRO ILE GLU ILE LYS VAL VAL SEQRES 8 B 316 TRP HIS ASN ARG PRO PHE GLU ALA ILE ILE GLN GLU VAL SEQRES 9 B 316 ILE SER GLY GLY HIS ASP LEU VAL LEU LYS MET ALA HIS SEQRES 10 B 316 GLN HIS ASP ARG LEU GLU ALA VAL ILE PHE THR PRO THR SEQRES 11 B 316 ASP TRP HIS LEU LEU ARG LYS CYS PRO SER PRO VAL TRP SEQRES 12 B 316 MET VAL LYS ASP GLN PRO TRP PRO GLU GLY GLY LYS ALA SEQRES 13 B 316 LEU VAL ALA VAL ASN LEU ALA SER GLU GLU PRO TYR HIS SEQRES 14 B 316 ASN ALA LEU ASN GLU LYS LEU VAL LYS GLU THR ILE GLU SEQRES 15 B 316 LEU ALA GLU GLN VAL ASN HIS THR GLU VAL HIS LEU VAL SEQRES 16 B 316 GLY ALA TYR PRO VAL THR PRO ILE ASN ILE ALA ILE GLU SEQRES 17 B 316 LEU PRO GLU PHE ASP PRO SER VAL TYR ASN ASP ALA ILE SEQRES 18 B 316 ARG GLY GLN HIS LEU LEU ALA MET LYS ALA LEU ARG GLN SEQRES 19 B 316 LYS PHE GLY ILE ASN GLU ASN MET THR HIS VAL GLU LYS SEQRES 20 B 316 GLY LEU PRO GLU GLU VAL ILE PRO ASP LEU ALA GLU HIS SEQRES 21 B 316 LEU GLN ALA GLY ILE VAL VAL LEU GLY THR VAL GLY ARG SEQRES 22 B 316 THR GLY ILE SER ALA ALA PHE LEU GLY ASN THR ALA GLU SEQRES 23 B 316 GLN VAL ILE ASP HIS LEU ARG CYS ASP LEU LEU VAL ILE SEQRES 24 B 316 LYS PRO ASP GLN TYR GLN THR PRO VAL GLU LEU ASP ASP SEQRES 25 B 316 GLU GLU ASP ASP HET Z6X A 401 17 HET Z6X B 401 17 HETNAM Z6X 3-OXOTETRADECANOIC ACID FORMUL 3 Z6X 2(C14 H26 O3) HELIX 1 AA1 GLN A 18 GLN A 29 1 12 HELIX 2 AA2 ASP A 43 GLU A 47 5 5 HELIX 3 AA3 SER A 53 GLY A 83 1 31 HELIX 4 AA4 ARG A 95 GLY A 108 1 14 HELIX 5 AA5 THR A 128 CYS A 138 1 11 HELIX 6 AA6 TYR A 168 GLU A 185 1 18 HELIX 7 AA7 PRO A 214 GLY A 237 1 24 HELIX 8 AA8 LEU A 249 LEU A 261 1 13 HELIX 9 AA9 GLY A 282 HIS A 291 1 10 HELIX 10 AB1 GLN B 18 GLN B 29 1 12 HELIX 11 AB2 ASP B 43 MET B 48 5 6 HELIX 12 AB3 SER B 53 ALA B 82 1 30 HELIX 13 AB4 ARG B 95 GLY B 108 1 14 HELIX 14 AB5 THR B 128 CYS B 138 1 11 HELIX 15 AB6 GLU B 166 ASN B 188 1 23 HELIX 16 AB7 ASP B 213 GLN B 234 1 22 HELIX 17 AB8 ASN B 239 ASN B 241 5 3 HELIX 18 AB9 LEU B 249 LEU B 261 1 13 HELIX 19 AC1 GLY B 282 HIS B 291 1 10 SHEET 1 AA110 ILE A 86 TRP A 92 0 SHEET 2 AA110 LYS A 34 ILE A 41 1 N ILE A 41 O VAL A 91 SHEET 3 AA110 ASN A 6 VAL A 10 1 N VAL A 9 O PHE A 38 SHEET 4 AA110 LEU A 111 ALA A 116 1 O LEU A 113 N VAL A 10 SHEET 5 AA110 VAL A 142 LYS A 146 1 O VAL A 145 N LYS A 114 SHEET 6 AA110 ASP A 295 VAL A 298 -1 O LEU A 296 N MET A 144 SHEET 7 AA110 ILE A 265 LEU A 268 1 N VAL A 266 O LEU A 297 SHEET 8 AA110 ALA A 156 VAL A 160 1 N LEU A 157 O VAL A 267 SHEET 9 AA110 VAL A 192 TYR A 198 1 O HIS A 193 N ALA A 156 SHEET 10 AA110 THR A 243 LYS A 247 1 O HIS A 244 N LEU A 194 SHEET 1 AA210 ILE B 86 TRP B 92 0 SHEET 2 AA210 LYS B 34 ILE B 41 1 N ILE B 35 O GLU B 87 SHEET 3 AA210 ASN B 6 VAL B 10 1 N VAL B 9 O PHE B 38 SHEET 4 AA210 LEU B 111 ALA B 116 1 O LEU B 111 N LEU B 8 SHEET 5 AA210 VAL B 142 LYS B 146 1 O TRP B 143 N VAL B 112 SHEET 6 AA210 ASP B 295 ILE B 299 -1 O LEU B 296 N MET B 144 SHEET 7 AA210 ILE B 265 GLY B 269 1 N LEU B 268 O LEU B 297 SHEET 8 AA210 LYS B 155 ALA B 159 1 N LEU B 157 O VAL B 267 SHEET 9 AA210 GLU B 191 TYR B 198 1 O HIS B 193 N ALA B 156 SHEET 10 AA210 THR B 243 LYS B 247 1 O HIS B 244 N LEU B 194 CISPEP 1 VAL A 187 ASN A 188 0 -7.36 CISPEP 2 THR B 50 LEU B 51 0 -11.49 CISPEP 3 ASP B 302 GLN B 303 0 -4.36 SITE 1 AC1 7 ARG A 22 TRP A 150 ALA A 156 THR A 180 SITE 2 AC1 7 LEU A 183 VAL A 187 ASN B 81 SITE 1 AC2 6 ASN A 81 ARG B 22 TYR B 26 TRP B 150 SITE 2 AC2 6 LEU B 183 VAL B 187 CRYST1 121.134 121.134 241.745 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008255 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004137 0.00000