HEADER HYDROLASE 01-JUL-15 5CCA TITLE CRYSTAL STRUCTURE OF MTB TOXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDORIBONUCLEASE MAZF3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TOXIN MAZF3,MRNA INTERFERASE MAZF3; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MAZF3, MT1134; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TOXIN-ANTITOXIN, RIBONUCLEASE, PERSISTENCE, STRUCTURAL GENOMICS, TB KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, TBSGC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.CASCIO,M.ARBING,V.DE SERRANO,D.EISENBERG,L.MIALLAU,TB STRUCTURAL AUTHOR 2 GENOMICS CONSORTIUM (TBSGC) REVDAT 4 27-SEP-23 5CCA 1 REMARK REVDAT 3 04-DEC-19 5CCA 1 REMARK REVDAT 2 27-SEP-17 5CCA 1 REMARK REVDAT 1 07-SEP-16 5CCA 0 JRNL AUTH D.CASCIO,M.ARBING,V.DE SERRANO,D.EISENBERG,L.MIALLAU, JRNL AUTH 2 TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC) JRNL TITL CRYSTAL STRUCTURE OF MTB TOXIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0123 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 91.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 7775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.300 REMARK 3 R VALUE (WORKING SET) : 0.300 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 389 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 549 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.49 REMARK 3 BIN R VALUE (WORKING SET) : 0.3600 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1370 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.39000 REMARK 3 B22 (A**2) : 2.39000 REMARK 3 B33 (A**2) : -7.76000 REMARK 3 B12 (A**2) : 1.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.589 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.411 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.349 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.769 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.885 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1373 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1886 ; 1.645 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 184 ; 5.043 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 49 ;40.664 ;24.082 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 201 ;15.243 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;19.657 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 242 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1025 ; 0.007 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 95 B 2 95 182 0.17 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CCA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000210790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9692 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MR-ROSETTA REMARK 200 STARTING MODEL: 3VUB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS TRIS PROPANE PH 7.0, 1.0 M REMARK 280 AMMONIUM, 5MM SPERMIDINE AND 20% GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.47233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 94.94467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 47.47233 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 94.94467 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.47233 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 94.94467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 47.47233 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 94.94467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -52.77750 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 91.41331 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -47.47233 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 -52.77750 REMARK 350 BIOMT2 4 0.866025 -0.500000 0.000000 91.41331 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -47.47233 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 ASP A -17 REMARK 465 LYS A -16 REMARK 465 ILE A -15 REMARK 465 GLY A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 GLN A 8 REMARK 465 LEU A 9 REMARK 465 ASP A 10 REMARK 465 LYS A 11 REMARK 465 ASP A 99 REMARK 465 TRP A 100 REMARK 465 VAL A 101 REMARK 465 VAL A 102 REMARK 465 ALA A 103 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 ASP B -17 REMARK 465 LYS B -16 REMARK 465 ILE B -15 REMARK 465 GLY B -14 REMARK 465 SER B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLN B 8 REMARK 465 LEU B 9 REMARK 465 ASP B 10 REMARK 465 LYS B 11 REMARK 465 ASP B 97 REMARK 465 LEU B 98 REMARK 465 ASP B 99 REMARK 465 TRP B 100 REMARK 465 VAL B 101 REMARK 465 VAL B 102 REMARK 465 ALA B 103 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 6 CG1 CG2 CD1 REMARK 470 ILE B 6 CG1 CG2 CD1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 21 CG CD OE1 OE2 REMARK 480 VAL A 51 CG2 REMARK 480 ASN A 55 ND2 REMARK 480 VAL B 22 CB CG1 CG2 REMARK 480 ASN B 55 CB CG OD1 ND2 REMARK 480 VAL B 59 CG1 CG2 REMARK 480 ARG B 75 CB CG CD NE CZ NH1 NH2 REMARK 480 ILE B 77 CB CG1 CG2 CD1 REMARK 480 TYR B 79 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR B 79 OH REMARK 480 LEU B 81 CG CD1 CD2 REMARK 480 ILE B 92 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 21 CB GLU A 21 CG -0.226 REMARK 500 VAL A 51 CB VAL A 51 CG2 -0.317 REMARK 500 VAL B 22 CA VAL B 22 CB -0.302 REMARK 500 TYR B 79 CA TYR B 79 CB 0.222 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN B 55 CB - CA - C ANGL. DEV. = 14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 2 76.36 -117.02 REMARK 500 THR A 38 95.03 -68.53 REMARK 500 ASP A 49 -153.35 -124.06 REMARK 500 GLN A 56 139.92 -179.73 REMARK 500 ILE A 77 67.21 -116.40 REMARK 500 ASP A 97 61.52 75.10 REMARK 500 THR B 38 99.02 -69.62 REMARK 500 ASP B 49 -153.75 -120.57 REMARK 500 GLN B 56 134.86 -170.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 5CCA A 1 103 UNP P9WIH8 MAZF3_MYCTO 1 103 DBREF 5CCA B 1 103 UNP P9WIH8 MAZF3_MYCTO 1 103 SEQADV 5CCA MET A -20 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLY A -19 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA SER A -18 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA ASP A -17 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA LYS A -16 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA ILE A -15 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLY A -14 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA SER A -13 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS A -12 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS A -11 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS A -10 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS A -9 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS A -8 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS A -7 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLU A -6 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA ASN A -5 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA LEU A -4 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA TYR A -3 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA PHE A -2 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLN A -1 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLY A 0 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA MET B -20 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLY B -19 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA SER B -18 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA ASP B -17 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA LYS B -16 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA ILE B -15 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLY B -14 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA SER B -13 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS B -12 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS B -11 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS B -10 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS B -9 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS B -8 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA HIS B -7 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLU B -6 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA ASN B -5 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA LEU B -4 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA TYR B -3 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA PHE B -2 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLN B -1 UNP P9WIH8 EXPRESSION TAG SEQADV 5CCA GLY B 0 UNP P9WIH8 EXPRESSION TAG SEQRES 1 A 124 MET GLY SER ASP LYS ILE GLY SER HIS HIS HIS HIS HIS SEQRES 2 A 124 HIS GLU ASN LEU TYR PHE GLN GLY MET ARG PRO ILE HIS SEQRES 3 A 124 ILE ALA GLN LEU ASP LYS ALA ARG PRO VAL LEU ILE LEU SEQRES 4 A 124 THR ARG GLU VAL VAL ARG PRO HIS LEU THR ASN VAL THR SEQRES 5 A 124 VAL ALA PRO ILE THR THR THR VAL ARG GLY LEU ALA THR SEQRES 6 A 124 GLU VAL PRO VAL ASP ALA VAL ASN GLY LEU ASN GLN PRO SEQRES 7 A 124 SER VAL VAL SER CYS ASP ASN THR GLN THR ILE PRO VAL SEQRES 8 A 124 CYS ASP LEU GLY ARG GLN ILE GLY TYR LEU LEU ALA SER SEQRES 9 A 124 GLN GLU PRO ALA LEU ALA GLU ALA ILE GLY ASN ALA PHE SEQRES 10 A 124 ASP LEU ASP TRP VAL VAL ALA SEQRES 1 B 124 MET GLY SER ASP LYS ILE GLY SER HIS HIS HIS HIS HIS SEQRES 2 B 124 HIS GLU ASN LEU TYR PHE GLN GLY MET ARG PRO ILE HIS SEQRES 3 B 124 ILE ALA GLN LEU ASP LYS ALA ARG PRO VAL LEU ILE LEU SEQRES 4 B 124 THR ARG GLU VAL VAL ARG PRO HIS LEU THR ASN VAL THR SEQRES 5 B 124 VAL ALA PRO ILE THR THR THR VAL ARG GLY LEU ALA THR SEQRES 6 B 124 GLU VAL PRO VAL ASP ALA VAL ASN GLY LEU ASN GLN PRO SEQRES 7 B 124 SER VAL VAL SER CYS ASP ASN THR GLN THR ILE PRO VAL SEQRES 8 B 124 CYS ASP LEU GLY ARG GLN ILE GLY TYR LEU LEU ALA SER SEQRES 9 B 124 GLN GLU PRO ALA LEU ALA GLU ALA ILE GLY ASN ALA PHE SEQRES 10 B 124 ASP LEU ASP TRP VAL VAL ALA HELIX 1 AA1 VAL A 23 LEU A 27 5 5 HELIX 2 AA2 ASP A 49 GLY A 53 5 5 HELIX 3 AA3 ASP A 63 THR A 65 5 3 HELIX 4 AA4 LEU A 81 SER A 83 5 3 HELIX 5 AA5 GLN A 84 ASP A 97 1 14 HELIX 6 AA6 VAL B 23 LEU B 27 5 5 HELIX 7 AA7 ASP B 49 GLY B 53 5 5 HELIX 8 AA8 CYS B 71 LEU B 73 5 3 HELIX 9 AA9 LEU B 81 SER B 83 5 3 HELIX 10 AB1 GLN B 84 PHE B 96 1 13 SHEET 1 AA1 4 GLU A 45 VAL A 48 0 SHEET 2 AA1 4 SER A 58 SER A 61 -1 O SER A 58 N VAL A 48 SHEET 3 AA1 4 ASN A 29 THR A 36 -1 N THR A 36 O VAL A 59 SHEET 4 AA1 4 GLN A 66 PRO A 69 -1 O GLN A 66 N VAL A 32 SHEET 1 AA2 6 GLU A 45 VAL A 48 0 SHEET 2 AA2 6 SER A 58 SER A 61 -1 O SER A 58 N VAL A 48 SHEET 3 AA2 6 ASN A 29 THR A 36 -1 N THR A 36 O VAL A 59 SHEET 4 AA2 6 ARG A 13 ILE A 17 -1 N LEU A 16 O ALA A 33 SHEET 5 AA2 6 ILE A 4 ILE A 6 -1 N ILE A 6 O ARG A 13 SHEET 6 AA2 6 LEU A 73 GLN A 76 -1 O GLY A 74 N HIS A 5 SHEET 1 AA3 5 ILE B 4 ILE B 6 0 SHEET 2 AA3 5 ARG B 13 ILE B 17 -1 O VAL B 15 N ILE B 4 SHEET 3 AA3 5 ASN B 29 THR B 36 -1 O ALA B 33 N LEU B 16 SHEET 4 AA3 5 SER B 58 SER B 61 -1 O VAL B 59 N THR B 36 SHEET 5 AA3 5 GLU B 45 VAL B 48 -1 N VAL B 48 O SER B 58 SHEET 1 AA4 4 ILE B 4 ILE B 6 0 SHEET 2 AA4 4 ARG B 13 ILE B 17 -1 O VAL B 15 N ILE B 4 SHEET 3 AA4 4 ASN B 29 THR B 36 -1 O ALA B 33 N LEU B 16 SHEET 4 AA4 4 GLN B 66 PRO B 69 -1 O GLN B 66 N VAL B 32 SSBOND 1 CYS A 71 CYS B 71 1555 1555 2.06 CRYST1 105.555 105.555 142.417 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009474 0.005470 0.000000 0.00000 SCALE2 0.000000 0.010939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007022 0.00000