HEADER PROTEIN BINDING 06-JUL-15 5CEC TITLE BD3459 PREDATORY ENDOPEPTIDASE FROM BDELLOVIBRIO BACTERIOVORUS IN TITLE 2 COMPLEX WITH IMMUNITY PROTEIN BD3460 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BD3459; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BD3459; COMPND 5 EC: 3.4.16.4; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BD3460; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BDELLOVIBRIO BACTERIOVORUS (STRAIN ATCC 15356 / SOURCE 3 DSM 50701 / NCIB 9529 / HD100); SOURCE 4 ORGANISM_TAXID: 264462; SOURCE 5 GENE: BD3459; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: BDELLOVIBRIO BACTERIOVORUS (STRAIN ATCC 15356 / SOURCE 11 DSM 50701 / NCIB 9529 / HD100); SOURCE 12 ORGANISM_TAXID: 264462; SOURCE 13 GENE: BD3460; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TRANSPEPTIDASE AND ANKYRIN REPEAT, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.L.LOVERING,I.T.CADBY,C.LAMBERT,R.E.SOCKETT REVDAT 4 10-JAN-24 5CEC 1 REMARK REVDAT 3 30-AUG-17 5CEC 1 SITE ATOM REVDAT 2 16-DEC-15 5CEC 1 JRNL REVDAT 1 09-DEC-15 5CEC 0 JRNL AUTH C.LAMBERT,I.T.CADBY,R.TILL,N.K.BUI,T.R.LERNER,W.S.HUGHES, JRNL AUTH 2 D.J.LEE,L.J.ALDERWICK,W.VOLLMER,E.R.SOCKETT,A.L.LOVERING JRNL TITL ANKYRIN-MEDIATED SELF-PROTECTION DURING CELL INVASION BY THE JRNL TITL 2 BACTERIAL PREDATOR BDELLOVIBRIO BACTERIOVORUS. JRNL REF NAT COMMUN V. 6 8884 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26626559 JRNL DOI 10.1038/NCOMMS9884 REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 96.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 117290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6194 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.36 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.40 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6775 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 357 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4548 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 493 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.81000 REMARK 3 B22 (A**2) : 1.19000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.053 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.049 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.737 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4660 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4544 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6290 ; 1.442 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10498 ; 0.923 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 600 ; 5.579 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;36.554 ;26.085 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 873 ;11.261 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;11.376 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 725 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5254 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 977 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2382 ; 1.389 ; 2.071 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2381 ; 1.389 ; 2.072 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2976 ; 1.870 ; 3.119 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 9204 ; 1.744 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 162 ;25.144 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 9471 ;10.846 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5CEC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117291 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03200 REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5CEA & 5CEB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PH 5.0, 3.2M AMMONIUM REMARK 280 SULPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.80500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.13500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.58500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 96.13500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.80500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.58500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 TYR A 3 REMARK 465 SER A 4 REMARK 465 GLN A 5 REMARK 465 CYS A 6 REMARK 465 LEU A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 GLU A 10 REMARK 465 VAL A 11 REMARK 465 VAL A 12 REMARK 465 MET A 13 REMARK 465 ILE A 14 REMARK 465 PRO A 15 REMARK 465 ALA A 16 REMARK 465 LEU A 17 REMARK 465 ALA A 18 REMARK 465 LYS A 19 REMARK 465 LYS A 20 REMARK 465 ILE A 21 REMARK 465 LEU A 22 REMARK 465 HIS A 23 REMARK 465 VAL A 24 REMARK 465 THR A 25 REMARK 465 VAL A 26 REMARK 465 GLY A 27 REMARK 465 THR A 28 REMARK 465 LEU A 29 REMARK 465 LEU A 30 REMARK 465 VAL A 31 REMARK 465 SER A 32 REMARK 465 SER A 33 REMARK 465 ALA A 34 REMARK 465 ALA A 35 REMARK 465 SER A 36 REMARK 465 MET A 37 REMARK 465 ASN A 439 REMARK 465 THR A 440 REMARK 465 ILE A 441 REMARK 465 THR A 442 REMARK 465 THR A 443 REMARK 465 GLU A 444 REMARK 465 LYS A 445 REMARK 465 LYS A 446 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 SER B 4 REMARK 465 TYR B 5 REMARK 465 LEU B 6 REMARK 465 LEU B 7 REMARK 465 ALA B 8 REMARK 465 ALA B 9 REMARK 465 LEU B 10 REMARK 465 ILE B 11 REMARK 465 PHE B 12 REMARK 465 PHE B 13 REMARK 465 LEU B 14 REMARK 465 ALA B 15 REMARK 465 GLY B 16 REMARK 465 LEU B 17 REMARK 465 LEU B 18 REMARK 465 HIS B 19 REMARK 465 GLY B 20 REMARK 465 THR B 21 REMARK 465 ALA B 22 REMARK 465 PHE B 23 REMARK 465 ALA B 24 REMARK 465 MET B 25 REMARK 465 SER B 26 REMARK 465 GLY B 27 REMARK 465 LEU B 221 REMARK 465 GLU B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 69 -142.83 53.25 REMARK 500 SER A 181 -52.55 -123.34 REMARK 500 ALA A 336 -16.35 69.24 REMARK 500 ALA A 340 49.65 -93.37 REMARK 500 ASN B 141 -37.89 -131.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 590 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 591 DISTANCE = 6.37 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 DBREF 5CEC A 1 446 UNP Q6MHT0 Q6MHT0_BDEBA 1 446 DBREF 5CEC B 1 220 UNP Q6MHS9 Q6MHS9_BDEBA 1 220 SEQADV 5CEC MET A 37 UNP Q6MHT0 ALA 37 CONFLICT SEQADV 5CEC MET A 38 UNP Q6MHT0 LYS 38 ENGINEERED MUTATION SEQADV 5CEC MET B 25 UNP Q6MHS9 ALA 25 CONFLICT SEQADV 5CEC LEU B 221 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC GLU B 222 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 223 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 224 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 225 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 226 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 227 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 228 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 229 UNP Q6MHS9 EXPRESSION TAG SEQADV 5CEC HIS B 230 UNP Q6MHS9 EXPRESSION TAG SEQRES 1 A 446 MET LYS TYR SER GLN CYS LEU LYS GLY GLU VAL VAL MET SEQRES 2 A 446 ILE PRO ALA LEU ALA LYS LYS ILE LEU HIS VAL THR VAL SEQRES 3 A 446 GLY THR LEU LEU VAL SER SER ALA ALA SER MET MET VAL SEQRES 4 A 446 TYR LEU ASN SER MET CYS HIS MET ALA ALA ASN SER LYS SEQRES 5 A 446 THR GLN GLN ILE GLN GLY ASP ASP ASN LYS ASP ASP LYS SEQRES 6 A 446 PHE PRO LEU ALA SER ILE SER LYS VAL VAL THR THR LEU SEQRES 7 A 446 TRP ALA VAL ASP ARG LEU GLY PRO ASP TYR ARG PHE LYS SEQRES 8 A 446 THR LYS LEU HIS VAL THR PRO THR ALA ASN GLY SER TYR SEQRES 9 A 446 ASP ILE HIS ILE GLU GLY SER ARG ASP PRO LEU PHE GLY SEQRES 10 A 446 ARG ASN MET SER TYR PHE LEU ILE SER GLU LEU ASN ARG SEQRES 11 A 446 MET LYS ILE THR LYS ILE GLU LYS LEU THR PHE ASP GLU SEQRES 12 A 446 ASN PHE LEU LEU ALA TRP LEU ALA GLU GLU LYS PRO MET SEQRES 13 A 446 ILE GLY GLY THR THR PRO LYS TYR ASP THR VAL GLU GLN SEQRES 14 A 446 GLN ALA SER ILE VAL ARG ALA THR LEU THR SER SER PHE SEQRES 15 A 446 ALA THR ALA ILE SER PRO GLY TYR TYR THR ILE LEU LYS SEQRES 16 A 446 THR LYS ALA ALA ARG ILE GLY VAL GLN MET SER ASN ARG SEQRES 17 A 446 PRO LYS ILE ASP VAL ARG THR ILE SER PHE VAL LYS LYS SEQRES 18 A 446 ALA GLU PHE GLN LYS ASN GLU LYS SER THR THR MET VAL SEQRES 19 A 446 LEU MET SER ALA PRO LEU LYS THR ILE LEU LYS ARG MET SEQRES 20 A 446 ASN ASN GLN SER ASN ASN TYR ILE ALA ASP ASN LEU TYR SEQRES 21 A 446 TRP ASN LEU GLY GLY THR GLU ALA PHE ASN ALA TYR ILE SEQRES 22 A 446 ALA GLY LYS MET GLN ALA ASP THR SER ASP ILE GLU PHE SEQRES 23 A 446 HIS ASN GLY SER GLY ASN ASN GLU GLY SER VAL ALA LYS SEQRES 24 A 446 PRO VAL TYR ASN GLU ALA THR CYS GLU MET MET ILE LYS SEQRES 25 A 446 VAL LEU TYR SER LEU ASP LYS SER LEU SER ALA LYS GLY SEQRES 26 A 446 TYR ASP LEU SER ASP VAL MET ALA VAL ALA ALA LYS ASP SEQRES 27 A 446 LYS ALA SER THR VAL GLY SER TYR GLY GLY VAL MET ALA SEQRES 28 A 446 GLY SER THR THR ALA LYS THR GLY SER VAL ASN LYS ALA SEQRES 29 A 446 LYS THR LEU MET GLY SER VAL SER THR LYS ASN GLY GLU SEQRES 30 A 446 ILE TYR PHE ALA VAL LEU MET HIS THR ASP TYR ASP LYS SEQRES 31 A 446 SER ARG SER ASP TRP GLY VAL ALA SER GLN GLN ILE LYS SEQRES 32 A 446 ASN LYS VAL SER GLN LEU ILE ASN GLN ASN GLY GLY PRO SEQRES 33 A 446 LYS ALA ILE LYS TYR THR GLU GLN LEU PRO LEU PRO PHE SEQRES 34 A 446 ASP LYS TYR SER TYR LEU THR LYS ALA ASN THR ILE THR SEQRES 35 A 446 THR GLU LYS LYS SEQRES 1 B 230 MET LYS LYS SER TYR LEU LEU ALA ALA LEU ILE PHE PHE SEQRES 2 B 230 LEU ALA GLY LEU LEU HIS GLY THR ALA PHE ALA MET SER SEQRES 3 B 230 GLY LYS SER SER LYS ALA LEU ASN GLU ALA ALA GLU GLN SEQRES 4 B 230 GLY ASP LEU ALA LYS VAL LYS ASN LEU VAL GLN LYS ASN SEQRES 5 B 230 LYS ILE ASP LEU ASN ALA GLN ASP GLU THR GLY MET THR SEQRES 6 B 230 PRO LEU MET ASN ALA ALA MET GLY GLY ASN LEU ASP ILE SEQRES 7 B 230 VAL LYS PHE LEU LEU SER LYS LYS VAL ASN LEU GLU LEU SEQRES 8 B 230 LYS ASN ASN GLY GLY GLU THR ALA LEU ALA PHE ALA VAL SEQRES 9 B 230 THR ASN ASP ALA TYR ASP VAL ALA GLU GLU LEU ILE LYS SEQRES 10 B 230 ALA GLY ALA ASN VAL ASP ILE ILE VAL ALA GLY ASP GLU SEQRES 11 B 230 GLY ASP THR LEU PHE MET ARG ALA ALA GLN ASN ASN LYS SEQRES 12 B 230 LYS THR ALA GLU SER ILE LEU ALA LYS ASN LYS SER LEU SEQRES 13 B 230 ILE ASN LYS ALA ASN THR LEU GLY GLU THR ALA LEU PHE SEQRES 14 B 230 ALA VAL ALA ARG TYR GLY THR PRO ALA ASP ILE ASP PHE SEQRES 15 B 230 LEU ILE LYS LYS GLY ALA ASP LEU LYS LEU LYS ASN LYS SEQRES 16 B 230 LYS GLY GLN THR ALA LEU ASP VAL ALA LYS GLU ALA SER SEQRES 17 B 230 ASN GLN ASP THR ALA LYS ALA LEU SER LYS LYS LYS LEU SEQRES 18 B 230 GLU HIS HIS HIS HIS HIS HIS HIS HIS HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 B 301 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 HOH *493(H2 O) HELIX 1 AA1 ILE A 71 GLY A 85 1 15 HELIX 2 AA2 GLY A 117 MET A 131 1 15 HELIX 3 AA3 THR A 166 SER A 181 1 16 HELIX 4 AA4 SER A 187 ILE A 201 1 15 HELIX 5 AA5 LYS A 220 PHE A 224 5 5 HELIX 6 AA6 PRO A 239 SER A 251 1 13 HELIX 7 AA7 ASN A 252 LEU A 263 1 12 HELIX 8 AA8 GLY A 264 GLN A 278 1 15 HELIX 9 AA9 CYS A 307 ALA A 323 1 17 HELIX 10 AB1 ASP A 327 VAL A 331 5 5 HELIX 11 AB2 GLY A 347 ALA A 351 5 5 HELIX 12 AB3 SER A 393 GLN A 412 1 20 HELIX 13 AB4 SER B 30 GLY B 40 1 11 HELIX 14 AB5 ASP B 41 GLN B 50 1 10 HELIX 15 AB6 THR B 65 GLY B 73 1 9 HELIX 16 AB7 ASN B 75 LYS B 85 1 11 HELIX 17 AB8 THR B 98 ASN B 106 1 9 HELIX 18 AB9 ALA B 108 ALA B 118 1 11 HELIX 19 AC1 THR B 133 ASN B 142 1 10 HELIX 20 AC2 ASN B 142 ASN B 153 1 12 HELIX 21 AC3 LYS B 154 LYS B 159 5 6 HELIX 22 AC4 THR B 166 GLY B 175 1 10 HELIX 23 AC5 THR B 176 LYS B 186 1 11 HELIX 24 AC6 THR B 199 ALA B 207 1 9 HELIX 25 AC7 ASN B 209 LYS B 219 1 11 SHEET 1 AA1 6 GLN A 57 GLY A 58 0 SHEET 2 AA1 6 TYR A 40 ALA A 48 -1 N HIS A 46 O GLN A 57 SHEET 3 AA1 6 GLY A 376 HIS A 385 -1 O HIS A 385 N TYR A 40 SHEET 4 AA1 6 ALA A 364 THR A 373 -1 N LEU A 367 O VAL A 382 SHEET 5 AA1 6 THR A 354 VAL A 361 -1 N VAL A 361 O ALA A 364 SHEET 6 AA1 6 ALA A 333 VAL A 334 -1 N ALA A 333 O ALA A 356 SHEET 1 AA2 3 LYS A 65 PRO A 67 0 SHEET 2 AA2 3 GLU A 304 THR A 306 -1 O ALA A 305 N PHE A 66 SHEET 3 AA2 3 ILE A 284 GLU A 285 -1 N GLU A 285 O GLU A 304 SHEET 1 AA3 6 ASP A 212 PHE A 218 0 SHEET 2 AA3 6 LYS A 135 PHE A 141 1 N ILE A 136 O ASP A 212 SHEET 3 AA3 6 TYR A 104 GLU A 109 1 N ILE A 108 O THR A 140 SHEET 4 AA3 6 LYS A 91 PRO A 98 -1 N THR A 97 O ASP A 105 SHEET 5 AA3 6 THR A 231 MET A 236 -1 O LEU A 235 N THR A 92 SHEET 6 AA3 6 THR A 436 LYS A 437 -1 O THR A 436 N VAL A 234 SSBOND 1 CYS A 45 CYS A 307 1555 1555 2.24 CISPEP 1 LYS A 154 PRO A 155 0 8.01 SITE 1 AC1 8 SER A 70 SER A 251 LYS A 357 THR A 358 SITE 2 AC1 8 GLY A 359 SER A 360 HOH A 657 HOH A 700 SITE 1 AC2 5 ARG A 246 HOH A 627 HOH A 655 HOH A 711 SITE 2 AC2 5 HOH A 748 SITE 1 AC3 4 ARG A 118 TRP A 149 HOH A 618 HOH A 765 SITE 1 AC4 2 LYS A 417 ALA A 418 SITE 1 AC5 3 HIS A 95 LYS A 226 THR A 232 SITE 1 AC6 7 LYS A 154 GLY B 74 ASN B 75 LEU B 76 SITE 2 AC6 7 ASP B 77 HOH B 410 HOH B 494 CRYST1 51.610 59.170 192.270 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019376 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005201 0.00000