data_5CG8 # _entry.id 5CG8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CG8 pdb_00005cg8 10.2210/pdb5cg8/pdb WWPDB D_1000211534 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5CG9 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CG8 _pdbx_database_status.recvd_initial_deposition_date 2015-07-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hashimoto, H.' 1 'Pais, J.E.' 2 'Dai, N.' 3 'Zhang, X.' 4 'Zheng, Y.' 5 'Cheng, X.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 10713 _citation.page_last 10721 _citation.title 'Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv870 _citation.pdbx_database_id_PubMed 26323320 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hashimoto, H.' 1 ? primary 'Pais, J.E.' 2 ? primary 'Dai, N.' 3 ? primary 'Correa, I.R.' 4 ? primary 'Zhang, X.' 5 ? primary 'Zheng, Y.' 6 ? primary 'Cheng, X.' 7 ? # _cell.entry_id 5CG8 _cell.length_a 83.802 _cell.length_b 107.360 _cell.length_c 167.671 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CG8 _symmetry.space_group_name_H-M 'I 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tet-like dioxygenase' 30725.766 1 ? ? 'UNP residues 57-321' ? 2 polymer syn ;DNA (5'-D(*AP*GP*AP*AP*TP*TP*CP*CP*GP*TP*TP*CP*CP*A)-3') ; 4239.780 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*GP*AP*AP*(5HC)P*GP*GP*AP*AP*TP*TP*CP*T)-3') ; 4349.854 1 ? ? ? ? 4 non-polymer syn '2-OXOGLUTARIC ACID' 146.098 1 ? ? ? ? 5 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 6 water nat water 18.015 3 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HMINKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTG RKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFN SLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVY FAHKGSKTKPYYEDTQKNSLKIHKETK ; ;HMINKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTG RKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFN SLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVY FAHKGSKTKPYYEDTQKNSLKIHKETK ; A ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DA)(DA)(DT)(DT)(DC)(DC)(DG)(DT)(DT)(DC)(DC)(DA)' AGAATTCCGTTCCA B ? 3 polydeoxyribonucleotide no yes '(DT)(DG)(DG)(DA)(DA)(5HC)(DG)(DG)(DA)(DA)(DT)(DT)(DC)(DT)' TGGAAXGGAATTCT C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 ILE n 1 4 ASN n 1 5 LYS n 1 6 LYS n 1 7 SER n 1 8 LEU n 1 9 LEU n 1 10 GLN n 1 11 ASN n 1 12 LEU n 1 13 LEU n 1 14 SER n 1 15 LYS n 1 16 CYS n 1 17 LYS n 1 18 THR n 1 19 THR n 1 20 PHE n 1 21 GLN n 1 22 GLN n 1 23 SER n 1 24 PHE n 1 25 THR n 1 26 ASN n 1 27 ALA n 1 28 ASN n 1 29 ILE n 1 30 THR n 1 31 LEU n 1 32 LYS n 1 33 ASP n 1 34 GLU n 1 35 LYS n 1 36 TRP n 1 37 LEU n 1 38 LYS n 1 39 ASN n 1 40 VAL n 1 41 ARG n 1 42 THR n 1 43 ALA n 1 44 TYR n 1 45 PHE n 1 46 VAL n 1 47 CYS n 1 48 ASP n 1 49 HIS n 1 50 ASP n 1 51 GLY n 1 52 SER n 1 53 VAL n 1 54 GLU n 1 55 LEU n 1 56 ALA n 1 57 TYR n 1 58 LEU n 1 59 PRO n 1 60 ASN n 1 61 VAL n 1 62 LEU n 1 63 PRO n 1 64 LYS n 1 65 GLU n 1 66 LEU n 1 67 VAL n 1 68 GLU n 1 69 GLU n 1 70 PHE n 1 71 THR n 1 72 GLU n 1 73 LYS n 1 74 PHE n 1 75 GLU n 1 76 SER n 1 77 ILE n 1 78 GLN n 1 79 THR n 1 80 GLY n 1 81 ARG n 1 82 LYS n 1 83 LYS n 1 84 ASP n 1 85 THR n 1 86 GLY n 1 87 TYR n 1 88 SER n 1 89 GLY n 1 90 ILE n 1 91 LEU n 1 92 ASP n 1 93 ASN n 1 94 SER n 1 95 MET n 1 96 PRO n 1 97 PHE n 1 98 ASN n 1 99 TYR n 1 100 VAL n 1 101 THR n 1 102 ALA n 1 103 ASP n 1 104 LEU n 1 105 SER n 1 106 GLN n 1 107 GLU n 1 108 LEU n 1 109 GLY n 1 110 GLN n 1 111 TYR n 1 112 LEU n 1 113 SER n 1 114 GLU n 1 115 ILE n 1 116 VAL n 1 117 ASN n 1 118 PRO n 1 119 GLN n 1 120 ILE n 1 121 ASN n 1 122 TYR n 1 123 TYR n 1 124 ILE n 1 125 SER n 1 126 LYS n 1 127 LEU n 1 128 LEU n 1 129 THR n 1 130 CYS n 1 131 VAL n 1 132 SER n 1 133 SER n 1 134 ARG n 1 135 THR n 1 136 ILE n 1 137 ASN n 1 138 TYR n 1 139 LEU n 1 140 VAL n 1 141 SER n 1 142 LEU n 1 143 ASN n 1 144 ASP n 1 145 SER n 1 146 TYR n 1 147 TYR n 1 148 ALA n 1 149 LEU n 1 150 ASN n 1 151 ASN n 1 152 CYS n 1 153 LEU n 1 154 TYR n 1 155 PRO n 1 156 SER n 1 157 THR n 1 158 ALA n 1 159 PHE n 1 160 ASN n 1 161 SER n 1 162 LEU n 1 163 LYS n 1 164 PRO n 1 165 SER n 1 166 ASN n 1 167 ASP n 1 168 GLY n 1 169 HIS n 1 170 ARG n 1 171 ILE n 1 172 ARG n 1 173 LYS n 1 174 PRO n 1 175 HIS n 1 176 LYS n 1 177 ASP n 1 178 ASN n 1 179 LEU n 1 180 ASP n 1 181 ILE n 1 182 THR n 1 183 PRO n 1 184 SER n 1 185 SER n 1 186 LEU n 1 187 PHE n 1 188 TYR n 1 189 PHE n 1 190 GLY n 1 191 ASN n 1 192 PHE n 1 193 GLN n 1 194 ASN n 1 195 THR n 1 196 GLU n 1 197 GLY n 1 198 TYR n 1 199 LEU n 1 200 GLU n 1 201 LEU n 1 202 THR n 1 203 ASP n 1 204 LYS n 1 205 ASN n 1 206 CYS n 1 207 LYS n 1 208 VAL n 1 209 PHE n 1 210 VAL n 1 211 GLN n 1 212 PRO n 1 213 GLY n 1 214 ASP n 1 215 VAL n 1 216 LEU n 1 217 PHE n 1 218 PHE n 1 219 LYS n 1 220 GLY n 1 221 ASN n 1 222 GLU n 1 223 TYR n 1 224 LYS n 1 225 HIS n 1 226 VAL n 1 227 VAL n 1 228 ALA n 1 229 ASN n 1 230 ILE n 1 231 THR n 1 232 SER n 1 233 GLY n 1 234 TRP n 1 235 ARG n 1 236 ILE n 1 237 GLY n 1 238 LEU n 1 239 VAL n 1 240 TYR n 1 241 PHE n 1 242 ALA n 1 243 HIS n 1 244 LYS n 1 245 GLY n 1 246 SER n 1 247 LYS n 1 248 THR n 1 249 LYS n 1 250 PRO n 1 251 TYR n 1 252 TYR n 1 253 GLU n 1 254 ASP n 1 255 THR n 1 256 GLN n 1 257 LYS n 1 258 ASN n 1 259 SER n 1 260 LEU n 1 261 LYS n 1 262 ILE n 1 263 HIS n 1 264 LYS n 1 265 GLU n 1 266 THR n 1 267 LYS n 2 1 DA n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DT n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DG n 2 10 DT n 2 11 DT n 2 12 DC n 2 13 DC n 2 14 DA n 3 1 DT n 3 2 DG n 3 3 DG n 3 4 DA n 3 5 DA n 3 6 5HC n 3 7 DG n 3 8 DG n 3 9 DA n 3 10 DA n 3 11 DT n 3 12 DT n 3 13 DC n 3 14 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 267 _entity_src_gen.gene_src_common_name Amoeba _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NAEGRDRAFT_55029 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Naegleria gruberi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5762 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b-His-sumo _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 14 'synthetic construct' ? 32630 ? 3 1 sample 1 14 'synthetic construct' ? 32630 ? # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.seq_align _struct_ref.seq_dif _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end D2W6T1_NAEGR UNP ? 1 1 ? ? D2W6T1 ? ;INKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTGRK KDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFNSL KPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVYFA HKGSKTKPYYEDTQKNSLKIHKETK ; 57 ? 5CG8 PDB ? 2 2 ? ? 5CG8 ? ? 1 ? 5CG8 PDB ? 3 3 ? ? 5CG8 ? ? 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5CG8 A 3 ? 267 ? D2W6T1 57 ? 321 ? 57 321 2 2 5CG8 B 1 ? 14 ? 5CG8 1 ? 14 ? 1 14 3 3 5CG8 C 1 ? 14 ? 5CG8 15 ? 28 ? 15 28 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CG8 HIS A 1 ? UNP D2W6T1 ? ? 'expression tag' 55 1 1 5CG8 MET A 2 ? UNP D2W6T1 ? ? 'expression tag' 56 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5HC 'DNA linking' n ;2'-deoxy-5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) ; ? 'C10 H16 N3 O8 P' 337.223 AKG non-polymer . '2-OXOGLUTARIC ACID' ? 'C5 H6 O5' 146.098 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CG8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.80 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 74.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% (w/v) polyethylene glycol monomethyl ether 550, 10 mM ZnSO4, and 100 mM MES, pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-03-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 82.11 _reflns.entry_id 5CG8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.69 _reflns.d_resolution_low 27.6 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 20985 _reflns.number_obs 20985 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.9 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.69 _reflns_shell.d_res_low 2.79 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.977 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5CG8 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20958 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.554 _refine.ls_d_res_high 2.702 _refine.ls_percent_reflns_obs 99.36 _refine.ls_R_factor_obs 0.1928 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1909 _refine.ls_R_factor_R_free 0.2295 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 1049 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 4LT5 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.35 _refine.pdbx_overall_phase_error 29.30 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2084 _refine_hist.pdbx_number_atoms_nucleic_acid 570 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 2668 _refine_hist.d_res_high 2.702 _refine_hist.d_res_low 27.554 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 2792 'X-RAY DIFFRACTION' ? f_angle_d 0.892 ? ? 3906 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.360 ? ? 1029 'X-RAY DIFFRACTION' ? f_chiral_restr 0.099 ? ? 437 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 407 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.7020 2.8443 2761 0.3118 98.00 0.3696 . . 145 . . 'X-RAY DIFFRACTION' . 2.8443 3.0223 2812 0.2873 100.00 0.3311 . . 149 . . 'X-RAY DIFFRACTION' . 3.0223 3.2553 2820 0.2709 100.00 0.2868 . . 148 . . 'X-RAY DIFFRACTION' . 3.2553 3.5823 2837 0.2209 100.00 0.2743 . . 150 . . 'X-RAY DIFFRACTION' . 3.5823 4.0992 2849 0.1984 100.00 0.2650 . . 150 . . 'X-RAY DIFFRACTION' . 4.0992 5.1590 2887 0.1605 100.00 0.1655 . . 152 . . 'X-RAY DIFFRACTION' . 5.1590 27.5556 2943 0.1624 98.00 0.2112 . . 155 . . # _struct.entry_id 5CG8 _struct.title 'NgTET1 in complex with 5hmC DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CG8 _struct_keywords.text 'dioxygenase, 5-hydroxymethylcytosine, NgTET1, OXIDOREDUCTASE-DNA complex' _struct_keywords.pdbx_keywords OXIDOREDUCTASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 4 ? GLN A 21 ? ASN A 58 GLN A 75 1 ? 18 HELX_P HELX_P2 AA2 PRO A 63 ? GLY A 80 ? PRO A 117 GLY A 134 1 ? 18 HELX_P HELX_P3 AA3 GLN A 106 ? ILE A 115 ? GLN A 160 ILE A 169 1 ? 10 HELX_P HELX_P4 AA4 ILE A 115 ? SER A 132 ? ILE A 169 SER A 186 1 ? 18 HELX_P HELX_P5 AA5 SER A 132 ? VAL A 140 ? SER A 186 VAL A 194 1 ? 9 HELX_P HELX_P6 AA6 ASN A 143 ? ASN A 151 ? ASN A 197 ASN A 205 1 ? 9 HELX_P HELX_P7 AA7 LYS A 244 ? LYS A 249 ? LYS A 298 LYS A 303 1 ? 6 HELX_P HELX_P8 AA8 GLN A 256 ? THR A 266 ? GLN A 310 THR A 320 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DA 5 "O3'" ? ? ? 1_555 C 5HC 6 P ? ? C DA 19 C 5HC 20 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale both ? C 5HC 6 "O3'" ? ? ? 1_555 C DG 7 P ? ? C 5HC 20 C DG 21 1_555 ? ? ? ? ? ? ? 1.611 ? ? metalc1 metalc ? ? A HIS 175 NE2 ? ? ? 1_555 E MN . MN ? ? A HIS 229 A MN 402 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc2 metalc ? ? A ASP 177 OD2 ? ? ? 1_555 E MN . MN ? ? A ASP 231 A MN 402 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc3 metalc ? ? A HIS 225 NE2 ? ? ? 1_555 E MN . MN ? ? A HIS 279 A MN 402 1_555 ? ? ? ? ? ? ? 2.130 ? ? metalc4 metalc ? ? D AKG . O2 ? ? ? 1_555 E MN . MN ? ? A AKG 401 A MN 402 1_555 ? ? ? ? ? ? ? 1.942 ? ? metalc5 metalc ? ? D AKG . O5 ? ? ? 1_555 E MN . MN ? ? A AKG 401 A MN 402 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc6 metalc ? ? E MN . MN ? ? ? 1_555 F HOH . O ? ? A MN 402 A HOH 501 1_555 ? ? ? ? ? ? ? 2.187 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 14 N3 ? ? B DA 1 C DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 14 O4 ? ? B DA 1 C DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 2 C DC 27 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog4 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 3 C DT 26 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog5 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 4 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 4 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 5 C DA 23 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog8 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 5 C DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 5 C DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 9 N1 ? ? B DT 6 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 9 N6 ? ? B DT 6 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 7 C DG 22 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog13 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC 8 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC 8 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC 8 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 10 C DA 19 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog17 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 11 C DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 11 C DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 12 C DG 17 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog20 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 13 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 13 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 13 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 1 N3 ? ? B DA 14 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 1 O4 ? ? B DA 14 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 10 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA1 9 10 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 28 ? LEU A 31 ? ASN A 82 LEU A 85 AA1 2 TYR A 44 ? CYS A 47 ? TYR A 98 CYS A 101 AA1 3 VAL A 53 ? LEU A 58 ? VAL A 107 LEU A 112 AA1 4 VAL A 215 ? PHE A 218 ? VAL A 269 PHE A 272 AA1 5 SER A 184 ? ASN A 191 ? SER A 238 ASN A 245 AA1 6 TRP A 234 ? PHE A 241 ? TRP A 288 PHE A 295 AA1 7 SER A 156 ? LEU A 162 ? SER A 210 LEU A 216 AA1 8 THR A 85 ? LEU A 91 ? THR A 139 LEU A 145 AA1 9 ASN A 98 ? VAL A 100 ? ASN A 152 VAL A 154 AA1 10 TYR A 251 ? THR A 255 ? TYR A 305 THR A 309 AA2 1 ASN A 39 ? VAL A 40 ? ASN A 93 VAL A 94 AA2 2 CYS A 206 ? VAL A 208 ? CYS A 260 VAL A 262 AA2 3 LEU A 199 ? LEU A 201 ? LEU A 253 LEU A 255 AA2 4 HIS A 225 ? VAL A 227 ? HIS A 279 VAL A 281 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 30 ? N THR A 84 O PHE A 45 ? O PHE A 99 AA1 2 3 N VAL A 46 ? N VAL A 100 O LEU A 55 ? O LEU A 109 AA1 3 4 N ALA A 56 ? N ALA A 110 O PHE A 217 ? O PHE A 271 AA1 4 5 O LEU A 216 ? O LEU A 270 N LEU A 186 ? N LEU A 240 AA1 5 6 N PHE A 189 ? N PHE A 243 O ILE A 236 ? O ILE A 290 AA1 6 7 O ARG A 235 ? O ARG A 289 N LEU A 162 ? N LEU A 216 AA1 7 8 O PHE A 159 ? O PHE A 213 N GLY A 86 ? N GLY A 140 AA1 8 9 N LEU A 91 ? N LEU A 145 O TYR A 99 ? O TYR A 153 AA1 9 10 N VAL A 100 ? N VAL A 154 O ASP A 254 ? O ASP A 308 AA2 1 2 N VAL A 40 ? N VAL A 94 O LYS A 207 ? O LYS A 261 AA2 2 3 O VAL A 208 ? O VAL A 262 N LEU A 199 ? N LEU A 253 AA2 3 4 N GLU A 200 ? N GLU A 254 O VAL A 226 ? O VAL A 280 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AKG 401 ? 12 'binding site for residue AKG A 401' AC2 Software A MN 402 ? 5 'binding site for residue MN A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 ASN A 160 ? ASN A 214 . ? 1_555 ? 2 AC1 12 ARG A 170 ? ARG A 224 . ? 1_555 ? 3 AC1 12 HIS A 175 ? HIS A 229 . ? 1_555 ? 4 AC1 12 ASP A 177 ? ASP A 231 . ? 1_555 ? 5 AC1 12 TYR A 188 ? TYR A 242 . ? 1_555 ? 6 AC1 12 LEU A 199 ? LEU A 253 . ? 1_555 ? 7 AC1 12 HIS A 225 ? HIS A 279 . ? 1_555 ? 8 AC1 12 VAL A 227 ? VAL A 281 . ? 1_555 ? 9 AC1 12 ARG A 235 ? ARG A 289 . ? 1_555 ? 10 AC1 12 MN E . ? MN A 402 . ? 1_555 ? 11 AC1 12 HOH F . ? HOH A 501 . ? 1_555 ? 12 AC1 12 5HC C 6 ? 5HC C 20 . ? 1_555 ? 13 AC2 5 HIS A 175 ? HIS A 229 . ? 1_555 ? 14 AC2 5 ASP A 177 ? ASP A 231 . ? 1_555 ? 15 AC2 5 HIS A 225 ? HIS A 279 . ? 1_555 ? 16 AC2 5 AKG D . ? AKG A 401 . ? 1_555 ? 17 AC2 5 HOH F . ? HOH A 501 . ? 1_555 ? # _atom_sites.entry_id 5CG8 _atom_sites.fract_transf_matrix[1][1] 0.011933 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009314 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005964 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 55 ? ? ? A . n A 1 2 MET 2 56 56 MET MET A . n A 1 3 ILE 3 57 57 ILE ILE A . n A 1 4 ASN 4 58 58 ASN ASN A . n A 1 5 LYS 5 59 59 LYS LYS A . n A 1 6 LYS 6 60 60 LYS LYS A . n A 1 7 SER 7 61 61 SER SER A . n A 1 8 LEU 8 62 62 LEU LEU A . n A 1 9 LEU 9 63 63 LEU LEU A . n A 1 10 GLN 10 64 64 GLN GLN A . n A 1 11 ASN 11 65 65 ASN ASN A . n A 1 12 LEU 12 66 66 LEU LEU A . n A 1 13 LEU 13 67 67 LEU LEU A . n A 1 14 SER 14 68 68 SER SER A . n A 1 15 LYS 15 69 69 LYS LYS A . n A 1 16 CYS 16 70 70 CYS CYS A . n A 1 17 LYS 17 71 71 LYS LYS A . n A 1 18 THR 18 72 72 THR THR A . n A 1 19 THR 19 73 73 THR THR A . n A 1 20 PHE 20 74 74 PHE PHE A . n A 1 21 GLN 21 75 75 GLN GLN A . n A 1 22 GLN 22 76 76 GLN GLN A . n A 1 23 SER 23 77 77 SER SER A . n A 1 24 PHE 24 78 78 PHE PHE A . n A 1 25 THR 25 79 79 THR THR A . n A 1 26 ASN 26 80 80 ASN ASN A . n A 1 27 ALA 27 81 81 ALA ALA A . n A 1 28 ASN 28 82 82 ASN ASN A . n A 1 29 ILE 29 83 83 ILE ILE A . n A 1 30 THR 30 84 84 THR THR A . n A 1 31 LEU 31 85 85 LEU LEU A . n A 1 32 LYS 32 86 86 LYS LYS A . n A 1 33 ASP 33 87 87 ASP ASP A . n A 1 34 GLU 34 88 88 GLU GLU A . n A 1 35 LYS 35 89 89 LYS LYS A . n A 1 36 TRP 36 90 90 TRP TRP A . n A 1 37 LEU 37 91 91 LEU LEU A . n A 1 38 LYS 38 92 92 LYS LYS A . n A 1 39 ASN 39 93 93 ASN ASN A . n A 1 40 VAL 40 94 94 VAL VAL A . n A 1 41 ARG 41 95 95 ARG ARG A . n A 1 42 THR 42 96 96 THR THR A . n A 1 43 ALA 43 97 97 ALA ALA A . n A 1 44 TYR 44 98 98 TYR TYR A . n A 1 45 PHE 45 99 99 PHE PHE A . n A 1 46 VAL 46 100 100 VAL VAL A . n A 1 47 CYS 47 101 101 CYS CYS A . n A 1 48 ASP 48 102 102 ASP ASP A . n A 1 49 HIS 49 103 103 HIS HIS A . n A 1 50 ASP 50 104 104 ASP ASP A . n A 1 51 GLY 51 105 105 GLY GLY A . n A 1 52 SER 52 106 106 SER SER A . n A 1 53 VAL 53 107 107 VAL VAL A . n A 1 54 GLU 54 108 108 GLU GLU A . n A 1 55 LEU 55 109 109 LEU LEU A . n A 1 56 ALA 56 110 110 ALA ALA A . n A 1 57 TYR 57 111 111 TYR TYR A . n A 1 58 LEU 58 112 112 LEU LEU A . n A 1 59 PRO 59 113 113 PRO PRO A . n A 1 60 ASN 60 114 114 ASN ASN A . n A 1 61 VAL 61 115 115 VAL VAL A . n A 1 62 LEU 62 116 116 LEU LEU A . n A 1 63 PRO 63 117 117 PRO PRO A . n A 1 64 LYS 64 118 118 LYS LYS A . n A 1 65 GLU 65 119 119 GLU GLU A . n A 1 66 LEU 66 120 120 LEU LEU A . n A 1 67 VAL 67 121 121 VAL VAL A . n A 1 68 GLU 68 122 122 GLU GLU A . n A 1 69 GLU 69 123 123 GLU GLU A . n A 1 70 PHE 70 124 124 PHE PHE A . n A 1 71 THR 71 125 125 THR THR A . n A 1 72 GLU 72 126 126 GLU GLU A . n A 1 73 LYS 73 127 127 LYS LYS A . n A 1 74 PHE 74 128 128 PHE PHE A . n A 1 75 GLU 75 129 129 GLU GLU A . n A 1 76 SER 76 130 130 SER SER A . n A 1 77 ILE 77 131 131 ILE ILE A . n A 1 78 GLN 78 132 132 GLN GLN A . n A 1 79 THR 79 133 133 THR THR A . n A 1 80 GLY 80 134 134 GLY GLY A . n A 1 81 ARG 81 135 135 ARG ARG A . n A 1 82 LYS 82 136 136 LYS LYS A . n A 1 83 LYS 83 137 137 LYS LYS A . n A 1 84 ASP 84 138 138 ASP ASP A . n A 1 85 THR 85 139 139 THR THR A . n A 1 86 GLY 86 140 140 GLY GLY A . n A 1 87 TYR 87 141 141 TYR TYR A . n A 1 88 SER 88 142 142 SER SER A . n A 1 89 GLY 89 143 143 GLY GLY A . n A 1 90 ILE 90 144 144 ILE ILE A . n A 1 91 LEU 91 145 145 LEU LEU A . n A 1 92 ASP 92 146 146 ASP ASP A . n A 1 93 ASN 93 147 147 ASN ASN A . n A 1 94 SER 94 148 148 SER SER A . n A 1 95 MET 95 149 149 MET MET A . n A 1 96 PRO 96 150 150 PRO PRO A . n A 1 97 PHE 97 151 151 PHE PHE A . n A 1 98 ASN 98 152 152 ASN ASN A . n A 1 99 TYR 99 153 153 TYR TYR A . n A 1 100 VAL 100 154 154 VAL VAL A . n A 1 101 THR 101 155 155 THR THR A . n A 1 102 ALA 102 156 156 ALA ALA A . n A 1 103 ASP 103 157 157 ASP ASP A . n A 1 104 LEU 104 158 158 LEU LEU A . n A 1 105 SER 105 159 159 SER SER A . n A 1 106 GLN 106 160 160 GLN GLN A . n A 1 107 GLU 107 161 161 GLU GLU A . n A 1 108 LEU 108 162 162 LEU LEU A . n A 1 109 GLY 109 163 163 GLY GLY A . n A 1 110 GLN 110 164 164 GLN GLN A . n A 1 111 TYR 111 165 165 TYR TYR A . n A 1 112 LEU 112 166 166 LEU LEU A . n A 1 113 SER 113 167 167 SER SER A . n A 1 114 GLU 114 168 168 GLU GLU A . n A 1 115 ILE 115 169 169 ILE ILE A . n A 1 116 VAL 116 170 170 VAL VAL A . n A 1 117 ASN 117 171 171 ASN ASN A . n A 1 118 PRO 118 172 172 PRO PRO A . n A 1 119 GLN 119 173 173 GLN GLN A . n A 1 120 ILE 120 174 174 ILE ILE A . n A 1 121 ASN 121 175 175 ASN ASN A . n A 1 122 TYR 122 176 176 TYR TYR A . n A 1 123 TYR 123 177 177 TYR TYR A . n A 1 124 ILE 124 178 178 ILE ILE A . n A 1 125 SER 125 179 179 SER SER A . n A 1 126 LYS 126 180 180 LYS LYS A . n A 1 127 LEU 127 181 181 LEU LEU A . n A 1 128 LEU 128 182 182 LEU LEU A . n A 1 129 THR 129 183 183 THR THR A . n A 1 130 CYS 130 184 184 CYS CYS A . n A 1 131 VAL 131 185 185 VAL VAL A . n A 1 132 SER 132 186 186 SER SER A . n A 1 133 SER 133 187 187 SER SER A . n A 1 134 ARG 134 188 188 ARG ARG A . n A 1 135 THR 135 189 189 THR THR A . n A 1 136 ILE 136 190 190 ILE ILE A . n A 1 137 ASN 137 191 191 ASN ASN A . n A 1 138 TYR 138 192 192 TYR TYR A . n A 1 139 LEU 139 193 193 LEU LEU A . n A 1 140 VAL 140 194 194 VAL VAL A . n A 1 141 SER 141 195 195 SER SER A . n A 1 142 LEU 142 196 196 LEU LEU A . n A 1 143 ASN 143 197 197 ASN ASN A . n A 1 144 ASP 144 198 198 ASP ASP A . n A 1 145 SER 145 199 199 SER SER A . n A 1 146 TYR 146 200 200 TYR TYR A . n A 1 147 TYR 147 201 201 TYR TYR A . n A 1 148 ALA 148 202 202 ALA ALA A . n A 1 149 LEU 149 203 203 LEU LEU A . n A 1 150 ASN 150 204 204 ASN ASN A . n A 1 151 ASN 151 205 205 ASN ASN A . n A 1 152 CYS 152 206 206 CYS CYS A . n A 1 153 LEU 153 207 207 LEU LEU A . n A 1 154 TYR 154 208 208 TYR TYR A . n A 1 155 PRO 155 209 209 PRO PRO A . n A 1 156 SER 156 210 210 SER SER A . n A 1 157 THR 157 211 211 THR THR A . n A 1 158 ALA 158 212 212 ALA ALA A . n A 1 159 PHE 159 213 213 PHE PHE A . n A 1 160 ASN 160 214 214 ASN ASN A . n A 1 161 SER 161 215 215 SER SER A . n A 1 162 LEU 162 216 216 LEU LEU A . n A 1 163 LYS 163 217 217 LYS LYS A . n A 1 164 PRO 164 218 218 PRO PRO A . n A 1 165 SER 165 219 219 SER SER A . n A 1 166 ASN 166 220 220 ASN ASN A . n A 1 167 ASP 167 221 221 ASP ASP A . n A 1 168 GLY 168 222 222 GLY GLY A . n A 1 169 HIS 169 223 223 HIS HIS A . n A 1 170 ARG 170 224 224 ARG ARG A . n A 1 171 ILE 171 225 225 ILE ILE A . n A 1 172 ARG 172 226 226 ARG ARG A . n A 1 173 LYS 173 227 227 LYS LYS A . n A 1 174 PRO 174 228 228 PRO PRO A . n A 1 175 HIS 175 229 229 HIS HIS A . n A 1 176 LYS 176 230 230 LYS LYS A . n A 1 177 ASP 177 231 231 ASP ASP A . n A 1 178 ASN 178 232 232 ASN ASN A . n A 1 179 LEU 179 233 233 LEU LEU A . n A 1 180 ASP 180 234 234 ASP ASP A . n A 1 181 ILE 181 235 235 ILE ILE A . n A 1 182 THR 182 236 236 THR THR A . n A 1 183 PRO 183 237 237 PRO PRO A . n A 1 184 SER 184 238 238 SER SER A . n A 1 185 SER 185 239 239 SER SER A . n A 1 186 LEU 186 240 240 LEU LEU A . n A 1 187 PHE 187 241 241 PHE PHE A . n A 1 188 TYR 188 242 242 TYR TYR A . n A 1 189 PHE 189 243 243 PHE PHE A . n A 1 190 GLY 190 244 244 GLY GLY A . n A 1 191 ASN 191 245 245 ASN ASN A . n A 1 192 PHE 192 246 246 PHE PHE A . n A 1 193 GLN 193 247 247 GLN GLN A . n A 1 194 ASN 194 248 248 ASN ASN A . n A 1 195 THR 195 249 249 THR THR A . n A 1 196 GLU 196 250 250 GLU GLU A . n A 1 197 GLY 197 251 251 GLY GLY A . n A 1 198 TYR 198 252 252 TYR TYR A . n A 1 199 LEU 199 253 253 LEU LEU A . n A 1 200 GLU 200 254 254 GLU GLU A . n A 1 201 LEU 201 255 255 LEU LEU A . n A 1 202 THR 202 256 256 THR THR A . n A 1 203 ASP 203 257 257 ASP ASP A . n A 1 204 LYS 204 258 258 LYS LYS A . n A 1 205 ASN 205 259 259 ASN ASN A . n A 1 206 CYS 206 260 260 CYS CYS A . n A 1 207 LYS 207 261 261 LYS LYS A . n A 1 208 VAL 208 262 262 VAL VAL A . n A 1 209 PHE 209 263 263 PHE PHE A . n A 1 210 VAL 210 264 264 VAL VAL A . n A 1 211 GLN 211 265 265 GLN GLN A . n A 1 212 PRO 212 266 266 PRO PRO A . n A 1 213 GLY 213 267 267 GLY GLY A . n A 1 214 ASP 214 268 268 ASP ASP A . n A 1 215 VAL 215 269 269 VAL VAL A . n A 1 216 LEU 216 270 270 LEU LEU A . n A 1 217 PHE 217 271 271 PHE PHE A . n A 1 218 PHE 218 272 272 PHE PHE A . n A 1 219 LYS 219 273 273 LYS LYS A . n A 1 220 GLY 220 274 274 GLY GLY A . n A 1 221 ASN 221 275 275 ASN ASN A . n A 1 222 GLU 222 276 276 GLU GLU A . n A 1 223 TYR 223 277 277 TYR TYR A . n A 1 224 LYS 224 278 278 LYS LYS A . n A 1 225 HIS 225 279 279 HIS HIS A . n A 1 226 VAL 226 280 280 VAL VAL A . n A 1 227 VAL 227 281 281 VAL VAL A . n A 1 228 ALA 228 282 282 ALA ALA A . n A 1 229 ASN 229 283 283 ASN ASN A . n A 1 230 ILE 230 284 284 ILE ILE A . n A 1 231 THR 231 285 285 THR THR A . n A 1 232 SER 232 286 286 SER SER A . n A 1 233 GLY 233 287 287 GLY GLY A . n A 1 234 TRP 234 288 288 TRP TRP A . n A 1 235 ARG 235 289 289 ARG ARG A . n A 1 236 ILE 236 290 290 ILE ILE A . n A 1 237 GLY 237 291 291 GLY GLY A . n A 1 238 LEU 238 292 292 LEU LEU A . n A 1 239 VAL 239 293 293 VAL VAL A . n A 1 240 TYR 240 294 294 TYR TYR A . n A 1 241 PHE 241 295 295 PHE PHE A . n A 1 242 ALA 242 296 296 ALA ALA A . n A 1 243 HIS 243 297 297 HIS HIS A . n A 1 244 LYS 244 298 298 LYS LYS A . n A 1 245 GLY 245 299 299 GLY GLY A . n A 1 246 SER 246 300 300 SER SER A . n A 1 247 LYS 247 301 301 LYS LYS A . n A 1 248 THR 248 302 302 THR THR A . n A 1 249 LYS 249 303 303 LYS LYS A . n A 1 250 PRO 250 304 304 PRO PRO A . n A 1 251 TYR 251 305 305 TYR TYR A . n A 1 252 TYR 252 306 306 TYR TYR A . n A 1 253 GLU 253 307 307 GLU GLU A . n A 1 254 ASP 254 308 308 ASP ASP A . n A 1 255 THR 255 309 309 THR THR A . n A 1 256 GLN 256 310 310 GLN GLN A . n A 1 257 LYS 257 311 311 LYS LYS A . n A 1 258 ASN 258 312 312 ASN ASN A . n A 1 259 SER 259 313 313 SER SER A . n A 1 260 LEU 260 314 314 LEU LEU A . n A 1 261 LYS 261 315 315 LYS LYS A . n A 1 262 ILE 262 316 316 ILE ILE A . n A 1 263 HIS 263 317 317 HIS HIS A . n A 1 264 LYS 264 318 318 LYS LYS A . n A 1 265 GLU 265 319 319 GLU GLU A . n A 1 266 THR 266 320 320 THR THR A . n A 1 267 LYS 267 321 321 LYS LYS A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DA 3 3 3 DA DA B . n B 2 4 DA 4 4 4 DA DA B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DT 6 6 6 DT DT B . n B 2 7 DC 7 7 7 DC DC B . n B 2 8 DC 8 8 8 DC DC B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DT 10 10 10 DT DT B . n B 2 11 DT 11 11 11 DT DT B . n B 2 12 DC 12 12 12 DC DC B . n B 2 13 DC 13 13 13 DC DC B . n B 2 14 DA 14 14 14 DA DA B . n C 3 1 DT 1 15 15 DT DT C . n C 3 2 DG 2 16 16 DG DG C . n C 3 3 DG 3 17 17 DG DG C . n C 3 4 DA 4 18 18 DA DA C . n C 3 5 DA 5 19 19 DA DA C . n C 3 6 5HC 6 20 20 5HC 5HC C . n C 3 7 DG 7 21 21 DG DG C . n C 3 8 DG 8 22 22 DG DG C . n C 3 9 DA 9 23 23 DA DA C . n C 3 10 DA 10 24 24 DA DA C . n C 3 11 DT 11 25 25 DT DT C . n C 3 12 DT 12 26 26 DT DT C . n C 3 13 DC 13 27 27 DC DC C . n C 3 14 DT 14 28 28 DT DT C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 AKG 1 401 1 AKG AKG A . E 5 MN 1 402 1 MN MN A . F 6 HOH 1 501 4 HOH HOH A . F 6 HOH 2 502 1 HOH HOH A . F 6 HOH 3 503 3 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 106.8 ? 2 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 94.2 ? 3 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 104.3 ? 4 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O2 ? D AKG . ? A AKG 401 ? 1_555 81.1 ? 5 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O2 ? D AKG . ? A AKG 401 ? 1_555 104.7 ? 6 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O2 ? D AKG . ? A AKG 401 ? 1_555 150.7 ? 7 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O5 ? D AKG . ? A AKG 401 ? 1_555 100.9 ? 8 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O5 ? D AKG . ? A AKG 401 ? 1_555 152.3 ? 9 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O5 ? D AKG . ? A AKG 401 ? 1_555 73.1 ? 10 O2 ? D AKG . ? A AKG 401 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O5 ? D AKG . ? A AKG 401 ? 1_555 79.4 ? 11 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O ? F HOH . ? A HOH 501 ? 1_555 176.0 ? 12 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O ? F HOH . ? A HOH 501 ? 1_555 77.1 ? 13 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O ? F HOH . ? A HOH 501 ? 1_555 84.0 ? 14 O2 ? D AKG . ? A AKG 401 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O ? F HOH . ? A HOH 501 ? 1_555 98.6 ? 15 O5 ? D AKG . ? A AKG 401 ? 1_555 MN ? E MN . ? A MN 402 ? 1_555 O ? F HOH . ? A HOH 501 ? 1_555 75.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-09 2 'Structure model' 1 1 2015-09-16 3 'Structure model' 1 2 2015-12-23 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' struct_conn 10 6 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' 7 6 'Structure model' '_struct_conn.conn_type_id' 8 6 'Structure model' '_struct_conn.id' 9 6 'Structure model' '_struct_conn.pdbx_dist_value' 10 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 6 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" C 5HC 20 ? ? P C DG 21 ? ? OP2 C DG 21 ? ? 84.81 105.20 -20.39 2.20 Y 2 1 "O3'" C 5HC 20 ? ? P C DG 21 ? ? OP1 C DG 21 ? ? 81.83 105.20 -23.37 2.20 Y 3 1 OP1 C DG 21 ? ? P C DG 21 ? ? OP2 C DG 21 ? ? 130.37 119.60 10.77 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 148 ? ? 67.87 -4.36 2 1 PRO A 150 ? ? -86.04 48.54 3 1 ILE A 169 ? ? -105.06 -63.83 4 1 CYS A 184 ? ? -91.50 -67.26 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 56 ? CG ? A MET 2 CG 2 1 Y 1 A MET 56 ? SD ? A MET 2 SD 3 1 Y 1 A MET 56 ? CE ? A MET 2 CE 4 1 Y 1 A ILE 57 ? CG1 ? A ILE 3 CG1 5 1 Y 1 A ILE 57 ? CG2 ? A ILE 3 CG2 6 1 Y 1 A ILE 57 ? CD1 ? A ILE 3 CD1 7 1 Y 1 A LYS 60 ? CG ? A LYS 6 CG 8 1 Y 1 A LYS 60 ? CD ? A LYS 6 CD 9 1 Y 1 A LYS 60 ? CE ? A LYS 6 CE 10 1 Y 1 A LYS 60 ? NZ ? A LYS 6 NZ 11 1 Y 1 A GLN 64 ? CG ? A GLN 10 CG 12 1 Y 1 A GLN 64 ? CD ? A GLN 10 CD 13 1 Y 1 A GLN 64 ? OE1 ? A GLN 10 OE1 14 1 Y 1 A GLN 64 ? NE2 ? A GLN 10 NE2 15 1 Y 1 A LYS 71 ? CD ? A LYS 17 CD 16 1 Y 1 A LYS 71 ? CE ? A LYS 17 CE 17 1 Y 1 A LYS 71 ? NZ ? A LYS 17 NZ 18 1 Y 1 A LYS 89 ? CG ? A LYS 35 CG 19 1 Y 1 A LYS 89 ? CD ? A LYS 35 CD 20 1 Y 1 A LYS 89 ? CE ? A LYS 35 CE 21 1 Y 1 A LYS 89 ? NZ ? A LYS 35 NZ 22 1 Y 1 A LYS 92 ? CD ? A LYS 38 CD 23 1 Y 1 A LYS 92 ? CE ? A LYS 38 CE 24 1 Y 1 A LYS 92 ? NZ ? A LYS 38 NZ 25 1 Y 1 A HIS 103 ? CG ? A HIS 49 CG 26 1 Y 1 A HIS 103 ? ND1 ? A HIS 49 ND1 27 1 Y 1 A HIS 103 ? CD2 ? A HIS 49 CD2 28 1 Y 1 A HIS 103 ? CE1 ? A HIS 49 CE1 29 1 Y 1 A HIS 103 ? NE2 ? A HIS 49 NE2 30 1 Y 1 A ASP 104 ? CG ? A ASP 50 CG 31 1 Y 1 A ASP 104 ? OD1 ? A ASP 50 OD1 32 1 Y 1 A ASP 104 ? OD2 ? A ASP 50 OD2 33 1 Y 1 A LYS 118 ? CG ? A LYS 64 CG 34 1 Y 1 A LYS 118 ? CD ? A LYS 64 CD 35 1 Y 1 A LYS 118 ? CE ? A LYS 64 CE 36 1 Y 1 A LYS 118 ? NZ ? A LYS 64 NZ 37 1 Y 1 A GLU 119 ? CG ? A GLU 65 CG 38 1 Y 1 A GLU 119 ? CD ? A GLU 65 CD 39 1 Y 1 A GLU 119 ? OE1 ? A GLU 65 OE1 40 1 Y 1 A GLU 119 ? OE2 ? A GLU 65 OE2 41 1 Y 1 A GLU 126 ? CG ? A GLU 72 CG 42 1 Y 1 A GLU 126 ? CD ? A GLU 72 CD 43 1 Y 1 A GLU 126 ? OE1 ? A GLU 72 OE1 44 1 Y 1 A GLU 126 ? OE2 ? A GLU 72 OE2 45 1 Y 1 A LYS 136 ? CG ? A LYS 82 CG 46 1 Y 1 A LYS 136 ? CD ? A LYS 82 CD 47 1 Y 1 A LYS 136 ? CE ? A LYS 82 CE 48 1 Y 1 A LYS 136 ? NZ ? A LYS 82 NZ 49 1 Y 1 A LYS 137 ? NZ ? A LYS 83 NZ 50 1 Y 1 A ARG 188 ? CG ? A ARG 134 CG 51 1 Y 1 A ARG 188 ? CD ? A ARG 134 CD 52 1 Y 1 A ARG 188 ? NE ? A ARG 134 NE 53 1 Y 1 A ARG 188 ? CZ ? A ARG 134 CZ 54 1 Y 1 A ARG 188 ? NH1 ? A ARG 134 NH1 55 1 Y 1 A ARG 188 ? NH2 ? A ARG 134 NH2 56 1 Y 1 A LYS 227 ? CG ? A LYS 173 CG 57 1 Y 1 A LYS 227 ? CD ? A LYS 173 CD 58 1 Y 1 A LYS 227 ? CE ? A LYS 173 CE 59 1 Y 1 A LYS 227 ? NZ ? A LYS 173 NZ 60 1 Y 1 A LYS 230 ? CE ? A LYS 176 CE 61 1 Y 1 A LYS 230 ? NZ ? A LYS 176 NZ 62 1 Y 1 A LYS 261 ? CE ? A LYS 207 CE 63 1 Y 1 A LYS 261 ? NZ ? A LYS 207 NZ 64 1 Y 1 A LYS 278 ? CE ? A LYS 224 CE 65 1 Y 1 A LYS 278 ? NZ ? A LYS 224 NZ 66 1 Y 1 A LYS 298 ? NZ ? A LYS 244 NZ 67 1 Y 1 A LYS 315 ? CE ? A LYS 261 CE 68 1 Y 1 A LYS 315 ? NZ ? A LYS 261 NZ 69 1 Y 1 A LYS 321 ? CG ? A LYS 267 CG 70 1 Y 1 A LYS 321 ? CD ? A LYS 267 CD 71 1 Y 1 A LYS 321 ? CE ? A LYS 267 CE 72 1 Y 1 A LYS 321 ? NZ ? A LYS 267 NZ # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id HIS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 55 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id HIS _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5HC P P N N 1 5HC OP1 O N N 2 5HC OP2 O N N 3 5HC "O5'" O N N 4 5HC "C5'" C N N 5 5HC "C4'" C N R 6 5HC "O4'" O N N 7 5HC "C3'" C N S 8 5HC "O3'" O N N 9 5HC "C2'" C N N 10 5HC "C1'" C N R 11 5HC N1 N N N 12 5HC C2 C N N 13 5HC O2 O N N 14 5HC N3 N N N 15 5HC C4 C N N 16 5HC N4 N N N 17 5HC C5 C N N 18 5HC C5M C N N 19 5HC O5 O N N 20 5HC C6 C N N 21 5HC OP3 O N N 22 5HC HOP2 H N N 23 5HC "H5'" H N N 24 5HC "H5''" H N N 25 5HC H4 H N N 26 5HC "H3'" H N N 27 5HC "HO3'" H N N 28 5HC "H2'" H N N 29 5HC "H2''" H N N 30 5HC "H1'" H N N 31 5HC HN41 H N N 32 5HC HN42 H N N 33 5HC H5M2 H N N 34 5HC H5M1 H N N 35 5HC HO5 H N N 36 5HC H6 H N N 37 5HC HOP3 H N N 38 AKG C1 C N N 39 AKG O1 O N N 40 AKG O2 O N N 41 AKG C2 C N N 42 AKG O5 O N N 43 AKG C3 C N N 44 AKG C4 C N N 45 AKG C5 C N N 46 AKG O3 O N N 47 AKG O4 O N N 48 AKG HO2 H N N 49 AKG H31 H N N 50 AKG H32 H N N 51 AKG H41 H N N 52 AKG H42 H N N 53 AKG HO4 H N N 54 ALA N N N N 55 ALA CA C N S 56 ALA C C N N 57 ALA O O N N 58 ALA CB C N N 59 ALA OXT O N N 60 ALA H H N N 61 ALA H2 H N N 62 ALA HA H N N 63 ALA HB1 H N N 64 ALA HB2 H N N 65 ALA HB3 H N N 66 ALA HXT H N N 67 ARG N N N N 68 ARG CA C N S 69 ARG C C N N 70 ARG O O N N 71 ARG CB C N N 72 ARG CG C N N 73 ARG CD C N N 74 ARG NE N N N 75 ARG CZ C N N 76 ARG NH1 N N N 77 ARG NH2 N N N 78 ARG OXT O N N 79 ARG H H N N 80 ARG H2 H N N 81 ARG HA H N N 82 ARG HB2 H N N 83 ARG HB3 H N N 84 ARG HG2 H N N 85 ARG HG3 H N N 86 ARG HD2 H N N 87 ARG HD3 H N N 88 ARG HE H N N 89 ARG HH11 H N N 90 ARG HH12 H N N 91 ARG HH21 H N N 92 ARG HH22 H N N 93 ARG HXT H N N 94 ASN N N N N 95 ASN CA C N S 96 ASN C C N N 97 ASN O O N N 98 ASN CB C N N 99 ASN CG C N N 100 ASN OD1 O N N 101 ASN ND2 N N N 102 ASN OXT O N N 103 ASN H H N N 104 ASN H2 H N N 105 ASN HA H N N 106 ASN HB2 H N N 107 ASN HB3 H N N 108 ASN HD21 H N N 109 ASN HD22 H N N 110 ASN HXT H N N 111 ASP N N N N 112 ASP CA C N S 113 ASP C C N N 114 ASP O O N N 115 ASP CB C N N 116 ASP CG C N N 117 ASP OD1 O N N 118 ASP OD2 O N N 119 ASP OXT O N N 120 ASP H H N N 121 ASP H2 H N N 122 ASP HA H N N 123 ASP HB2 H N N 124 ASP HB3 H N N 125 ASP HD2 H N N 126 ASP HXT H N N 127 CYS N N N N 128 CYS CA C N R 129 CYS C C N N 130 CYS O O N N 131 CYS CB C N N 132 CYS SG S N N 133 CYS OXT O N N 134 CYS H H N N 135 CYS H2 H N N 136 CYS HA H N N 137 CYS HB2 H N N 138 CYS HB3 H N N 139 CYS HG H N N 140 CYS HXT H N N 141 DA OP3 O N N 142 DA P P N N 143 DA OP1 O N N 144 DA OP2 O N N 145 DA "O5'" O N N 146 DA "C5'" C N N 147 DA "C4'" C N R 148 DA "O4'" O N N 149 DA "C3'" C N S 150 DA "O3'" O N N 151 DA "C2'" C N N 152 DA "C1'" C N R 153 DA N9 N Y N 154 DA C8 C Y N 155 DA N7 N Y N 156 DA C5 C Y N 157 DA C6 C Y N 158 DA N6 N N N 159 DA N1 N Y N 160 DA C2 C Y N 161 DA N3 N Y N 162 DA C4 C Y N 163 DA HOP3 H N N 164 DA HOP2 H N N 165 DA "H5'" H N N 166 DA "H5''" H N N 167 DA "H4'" H N N 168 DA "H3'" H N N 169 DA "HO3'" H N N 170 DA "H2'" H N N 171 DA "H2''" H N N 172 DA "H1'" H N N 173 DA H8 H N N 174 DA H61 H N N 175 DA H62 H N N 176 DA H2 H N N 177 DC OP3 O N N 178 DC P P N N 179 DC OP1 O N N 180 DC OP2 O N N 181 DC "O5'" O N N 182 DC "C5'" C N N 183 DC "C4'" C N R 184 DC "O4'" O N N 185 DC "C3'" C N S 186 DC "O3'" O N N 187 DC "C2'" C N N 188 DC "C1'" C N R 189 DC N1 N N N 190 DC C2 C N N 191 DC O2 O N N 192 DC N3 N N N 193 DC C4 C N N 194 DC N4 N N N 195 DC C5 C N N 196 DC C6 C N N 197 DC HOP3 H N N 198 DC HOP2 H N N 199 DC "H5'" H N N 200 DC "H5''" H N N 201 DC "H4'" H N N 202 DC "H3'" H N N 203 DC "HO3'" H N N 204 DC "H2'" H N N 205 DC "H2''" H N N 206 DC "H1'" H N N 207 DC H41 H N N 208 DC H42 H N N 209 DC H5 H N N 210 DC H6 H N N 211 DG OP3 O N N 212 DG P P N N 213 DG OP1 O N N 214 DG OP2 O N N 215 DG "O5'" O N N 216 DG "C5'" C N N 217 DG "C4'" C N R 218 DG "O4'" O N N 219 DG "C3'" C N S 220 DG "O3'" O N N 221 DG "C2'" C N N 222 DG "C1'" C N R 223 DG N9 N Y N 224 DG C8 C Y N 225 DG N7 N Y N 226 DG C5 C Y N 227 DG C6 C N N 228 DG O6 O N N 229 DG N1 N N N 230 DG C2 C N N 231 DG N2 N N N 232 DG N3 N N N 233 DG C4 C Y N 234 DG HOP3 H N N 235 DG HOP2 H N N 236 DG "H5'" H N N 237 DG "H5''" H N N 238 DG "H4'" H N N 239 DG "H3'" H N N 240 DG "HO3'" H N N 241 DG "H2'" H N N 242 DG "H2''" H N N 243 DG "H1'" H N N 244 DG H8 H N N 245 DG H1 H N N 246 DG H21 H N N 247 DG H22 H N N 248 DT OP3 O N N 249 DT P P N N 250 DT OP1 O N N 251 DT OP2 O N N 252 DT "O5'" O N N 253 DT "C5'" C N N 254 DT "C4'" C N R 255 DT "O4'" O N N 256 DT "C3'" C N S 257 DT "O3'" O N N 258 DT "C2'" C N N 259 DT "C1'" C N R 260 DT N1 N N N 261 DT C2 C N N 262 DT O2 O N N 263 DT N3 N N N 264 DT C4 C N N 265 DT O4 O N N 266 DT C5 C N N 267 DT C7 C N N 268 DT C6 C N N 269 DT HOP3 H N N 270 DT HOP2 H N N 271 DT "H5'" H N N 272 DT "H5''" H N N 273 DT "H4'" H N N 274 DT "H3'" H N N 275 DT "HO3'" H N N 276 DT "H2'" H N N 277 DT "H2''" H N N 278 DT "H1'" H N N 279 DT H3 H N N 280 DT H71 H N N 281 DT H72 H N N 282 DT H73 H N N 283 DT H6 H N N 284 GLN N N N N 285 GLN CA C N S 286 GLN C C N N 287 GLN O O N N 288 GLN CB C N N 289 GLN CG C N N 290 GLN CD C N N 291 GLN OE1 O N N 292 GLN NE2 N N N 293 GLN OXT O N N 294 GLN H H N N 295 GLN H2 H N N 296 GLN HA H N N 297 GLN HB2 H N N 298 GLN HB3 H N N 299 GLN HG2 H N N 300 GLN HG3 H N N 301 GLN HE21 H N N 302 GLN HE22 H N N 303 GLN HXT H N N 304 GLU N N N N 305 GLU CA C N S 306 GLU C C N N 307 GLU O O N N 308 GLU CB C N N 309 GLU CG C N N 310 GLU CD C N N 311 GLU OE1 O N N 312 GLU OE2 O N N 313 GLU OXT O N N 314 GLU H H N N 315 GLU H2 H N N 316 GLU HA H N N 317 GLU HB2 H N N 318 GLU HB3 H N N 319 GLU HG2 H N N 320 GLU HG3 H N N 321 GLU HE2 H N N 322 GLU HXT H N N 323 GLY N N N N 324 GLY CA C N N 325 GLY C C N N 326 GLY O O N N 327 GLY OXT O N N 328 GLY H H N N 329 GLY H2 H N N 330 GLY HA2 H N N 331 GLY HA3 H N N 332 GLY HXT H N N 333 HIS N N N N 334 HIS CA C N S 335 HIS C C N N 336 HIS O O N N 337 HIS CB C N N 338 HIS CG C Y N 339 HIS ND1 N Y N 340 HIS CD2 C Y N 341 HIS CE1 C Y N 342 HIS NE2 N Y N 343 HIS OXT O N N 344 HIS H H N N 345 HIS H2 H N N 346 HIS HA H N N 347 HIS HB2 H N N 348 HIS HB3 H N N 349 HIS HD1 H N N 350 HIS HD2 H N N 351 HIS HE1 H N N 352 HIS HE2 H N N 353 HIS HXT H N N 354 HOH O O N N 355 HOH H1 H N N 356 HOH H2 H N N 357 ILE N N N N 358 ILE CA C N S 359 ILE C C N N 360 ILE O O N N 361 ILE CB C N S 362 ILE CG1 C N N 363 ILE CG2 C N N 364 ILE CD1 C N N 365 ILE OXT O N N 366 ILE H H N N 367 ILE H2 H N N 368 ILE HA H N N 369 ILE HB H N N 370 ILE HG12 H N N 371 ILE HG13 H N N 372 ILE HG21 H N N 373 ILE HG22 H N N 374 ILE HG23 H N N 375 ILE HD11 H N N 376 ILE HD12 H N N 377 ILE HD13 H N N 378 ILE HXT H N N 379 LEU N N N N 380 LEU CA C N S 381 LEU C C N N 382 LEU O O N N 383 LEU CB C N N 384 LEU CG C N N 385 LEU CD1 C N N 386 LEU CD2 C N N 387 LEU OXT O N N 388 LEU H H N N 389 LEU H2 H N N 390 LEU HA H N N 391 LEU HB2 H N N 392 LEU HB3 H N N 393 LEU HG H N N 394 LEU HD11 H N N 395 LEU HD12 H N N 396 LEU HD13 H N N 397 LEU HD21 H N N 398 LEU HD22 H N N 399 LEU HD23 H N N 400 LEU HXT H N N 401 LYS N N N N 402 LYS CA C N S 403 LYS C C N N 404 LYS O O N N 405 LYS CB C N N 406 LYS CG C N N 407 LYS CD C N N 408 LYS CE C N N 409 LYS NZ N N N 410 LYS OXT O N N 411 LYS H H N N 412 LYS H2 H N N 413 LYS HA H N N 414 LYS HB2 H N N 415 LYS HB3 H N N 416 LYS HG2 H N N 417 LYS HG3 H N N 418 LYS HD2 H N N 419 LYS HD3 H N N 420 LYS HE2 H N N 421 LYS HE3 H N N 422 LYS HZ1 H N N 423 LYS HZ2 H N N 424 LYS HZ3 H N N 425 LYS HXT H N N 426 MET N N N N 427 MET CA C N S 428 MET C C N N 429 MET O O N N 430 MET CB C N N 431 MET CG C N N 432 MET SD S N N 433 MET CE C N N 434 MET OXT O N N 435 MET H H N N 436 MET H2 H N N 437 MET HA H N N 438 MET HB2 H N N 439 MET HB3 H N N 440 MET HG2 H N N 441 MET HG3 H N N 442 MET HE1 H N N 443 MET HE2 H N N 444 MET HE3 H N N 445 MET HXT H N N 446 MN MN MN N N 447 PHE N N N N 448 PHE CA C N S 449 PHE C C N N 450 PHE O O N N 451 PHE CB C N N 452 PHE CG C Y N 453 PHE CD1 C Y N 454 PHE CD2 C Y N 455 PHE CE1 C Y N 456 PHE CE2 C Y N 457 PHE CZ C Y N 458 PHE OXT O N N 459 PHE H H N N 460 PHE H2 H N N 461 PHE HA H N N 462 PHE HB2 H N N 463 PHE HB3 H N N 464 PHE HD1 H N N 465 PHE HD2 H N N 466 PHE HE1 H N N 467 PHE HE2 H N N 468 PHE HZ H N N 469 PHE HXT H N N 470 PRO N N N N 471 PRO CA C N S 472 PRO C C N N 473 PRO O O N N 474 PRO CB C N N 475 PRO CG C N N 476 PRO CD C N N 477 PRO OXT O N N 478 PRO H H N N 479 PRO HA H N N 480 PRO HB2 H N N 481 PRO HB3 H N N 482 PRO HG2 H N N 483 PRO HG3 H N N 484 PRO HD2 H N N 485 PRO HD3 H N N 486 PRO HXT H N N 487 SER N N N N 488 SER CA C N S 489 SER C C N N 490 SER O O N N 491 SER CB C N N 492 SER OG O N N 493 SER OXT O N N 494 SER H H N N 495 SER H2 H N N 496 SER HA H N N 497 SER HB2 H N N 498 SER HB3 H N N 499 SER HG H N N 500 SER HXT H N N 501 THR N N N N 502 THR CA C N S 503 THR C C N N 504 THR O O N N 505 THR CB C N R 506 THR OG1 O N N 507 THR CG2 C N N 508 THR OXT O N N 509 THR H H N N 510 THR H2 H N N 511 THR HA H N N 512 THR HB H N N 513 THR HG1 H N N 514 THR HG21 H N N 515 THR HG22 H N N 516 THR HG23 H N N 517 THR HXT H N N 518 TRP N N N N 519 TRP CA C N S 520 TRP C C N N 521 TRP O O N N 522 TRP CB C N N 523 TRP CG C Y N 524 TRP CD1 C Y N 525 TRP CD2 C Y N 526 TRP NE1 N Y N 527 TRP CE2 C Y N 528 TRP CE3 C Y N 529 TRP CZ2 C Y N 530 TRP CZ3 C Y N 531 TRP CH2 C Y N 532 TRP OXT O N N 533 TRP H H N N 534 TRP H2 H N N 535 TRP HA H N N 536 TRP HB2 H N N 537 TRP HB3 H N N 538 TRP HD1 H N N 539 TRP HE1 H N N 540 TRP HE3 H N N 541 TRP HZ2 H N N 542 TRP HZ3 H N N 543 TRP HH2 H N N 544 TRP HXT H N N 545 TYR N N N N 546 TYR CA C N S 547 TYR C C N N 548 TYR O O N N 549 TYR CB C N N 550 TYR CG C Y N 551 TYR CD1 C Y N 552 TYR CD2 C Y N 553 TYR CE1 C Y N 554 TYR CE2 C Y N 555 TYR CZ C Y N 556 TYR OH O N N 557 TYR OXT O N N 558 TYR H H N N 559 TYR H2 H N N 560 TYR HA H N N 561 TYR HB2 H N N 562 TYR HB3 H N N 563 TYR HD1 H N N 564 TYR HD2 H N N 565 TYR HE1 H N N 566 TYR HE2 H N N 567 TYR HH H N N 568 TYR HXT H N N 569 VAL N N N N 570 VAL CA C N S 571 VAL C C N N 572 VAL O O N N 573 VAL CB C N N 574 VAL CG1 C N N 575 VAL CG2 C N N 576 VAL OXT O N N 577 VAL H H N N 578 VAL H2 H N N 579 VAL HA H N N 580 VAL HB H N N 581 VAL HG11 H N N 582 VAL HG12 H N N 583 VAL HG13 H N N 584 VAL HG21 H N N 585 VAL HG22 H N N 586 VAL HG23 H N N 587 VAL HXT H N N 588 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5HC "O4'" "C4'" sing N N 1 5HC "O4'" "C1'" sing N N 2 5HC "C4'" "C5'" sing N N 3 5HC "C4'" "C3'" sing N N 4 5HC O2 C2 doub N N 5 5HC "C1'" N1 sing N N 6 5HC "C1'" "C2'" sing N N 7 5HC "C5'" "O5'" sing N N 8 5HC C2 N1 sing N N 9 5HC C2 N3 sing N N 10 5HC N1 C6 sing N N 11 5HC N3 C4 doub N N 12 5HC "O5'" P sing N N 13 5HC "C2'" "C3'" sing N N 14 5HC C6 C5 doub N N 15 5HC "C3'" "O3'" sing N N 16 5HC P OP1 doub N N 17 5HC P OP2 sing N N 18 5HC C4 C5 sing N N 19 5HC C4 N4 sing N N 20 5HC C5 C5M sing N N 21 5HC C5M O5 sing N N 22 5HC P OP3 sing N N 23 5HC OP2 HOP2 sing N N 24 5HC "C5'" "H5'" sing N N 25 5HC "C5'" "H5''" sing N N 26 5HC "C4'" H4 sing N N 27 5HC "C3'" "H3'" sing N N 28 5HC "O3'" "HO3'" sing N N 29 5HC "C2'" "H2'" sing N N 30 5HC "C2'" "H2''" sing N N 31 5HC "C1'" "H1'" sing N N 32 5HC N4 HN41 sing N N 33 5HC N4 HN42 sing N N 34 5HC C5M H5M2 sing N N 35 5HC C5M H5M1 sing N N 36 5HC O5 HO5 sing N N 37 5HC C6 H6 sing N N 38 5HC OP3 HOP3 sing N N 39 AKG C1 O1 doub N N 40 AKG C1 O2 sing N N 41 AKG C1 C2 sing N N 42 AKG O2 HO2 sing N N 43 AKG C2 O5 doub N N 44 AKG C2 C3 sing N N 45 AKG C3 C4 sing N N 46 AKG C3 H31 sing N N 47 AKG C3 H32 sing N N 48 AKG C4 C5 sing N N 49 AKG C4 H41 sing N N 50 AKG C4 H42 sing N N 51 AKG C5 O3 doub N N 52 AKG C5 O4 sing N N 53 AKG O4 HO4 sing N N 54 ALA N CA sing N N 55 ALA N H sing N N 56 ALA N H2 sing N N 57 ALA CA C sing N N 58 ALA CA CB sing N N 59 ALA CA HA sing N N 60 ALA C O doub N N 61 ALA C OXT sing N N 62 ALA CB HB1 sing N N 63 ALA CB HB2 sing N N 64 ALA CB HB3 sing N N 65 ALA OXT HXT sing N N 66 ARG N CA sing N N 67 ARG N H sing N N 68 ARG N H2 sing N N 69 ARG CA C sing N N 70 ARG CA CB sing N N 71 ARG CA HA sing N N 72 ARG C O doub N N 73 ARG C OXT sing N N 74 ARG CB CG sing N N 75 ARG CB HB2 sing N N 76 ARG CB HB3 sing N N 77 ARG CG CD sing N N 78 ARG CG HG2 sing N N 79 ARG CG HG3 sing N N 80 ARG CD NE sing N N 81 ARG CD HD2 sing N N 82 ARG CD HD3 sing N N 83 ARG NE CZ sing N N 84 ARG NE HE sing N N 85 ARG CZ NH1 sing N N 86 ARG CZ NH2 doub N N 87 ARG NH1 HH11 sing N N 88 ARG NH1 HH12 sing N N 89 ARG NH2 HH21 sing N N 90 ARG NH2 HH22 sing N N 91 ARG OXT HXT sing N N 92 ASN N CA sing N N 93 ASN N H sing N N 94 ASN N H2 sing N N 95 ASN CA C sing N N 96 ASN CA CB sing N N 97 ASN CA HA sing N N 98 ASN C O doub N N 99 ASN C OXT sing N N 100 ASN CB CG sing N N 101 ASN CB HB2 sing N N 102 ASN CB HB3 sing N N 103 ASN CG OD1 doub N N 104 ASN CG ND2 sing N N 105 ASN ND2 HD21 sing N N 106 ASN ND2 HD22 sing N N 107 ASN OXT HXT sing N N 108 ASP N CA sing N N 109 ASP N H sing N N 110 ASP N H2 sing N N 111 ASP CA C sing N N 112 ASP CA CB sing N N 113 ASP CA HA sing N N 114 ASP C O doub N N 115 ASP C OXT sing N N 116 ASP CB CG sing N N 117 ASP CB HB2 sing N N 118 ASP CB HB3 sing N N 119 ASP CG OD1 doub N N 120 ASP CG OD2 sing N N 121 ASP OD2 HD2 sing N N 122 ASP OXT HXT sing N N 123 CYS N CA sing N N 124 CYS N H sing N N 125 CYS N H2 sing N N 126 CYS CA C sing N N 127 CYS CA CB sing N N 128 CYS CA HA sing N N 129 CYS C O doub N N 130 CYS C OXT sing N N 131 CYS CB SG sing N N 132 CYS CB HB2 sing N N 133 CYS CB HB3 sing N N 134 CYS SG HG sing N N 135 CYS OXT HXT sing N N 136 DA OP3 P sing N N 137 DA OP3 HOP3 sing N N 138 DA P OP1 doub N N 139 DA P OP2 sing N N 140 DA P "O5'" sing N N 141 DA OP2 HOP2 sing N N 142 DA "O5'" "C5'" sing N N 143 DA "C5'" "C4'" sing N N 144 DA "C5'" "H5'" sing N N 145 DA "C5'" "H5''" sing N N 146 DA "C4'" "O4'" sing N N 147 DA "C4'" "C3'" sing N N 148 DA "C4'" "H4'" sing N N 149 DA "O4'" "C1'" sing N N 150 DA "C3'" "O3'" sing N N 151 DA "C3'" "C2'" sing N N 152 DA "C3'" "H3'" sing N N 153 DA "O3'" "HO3'" sing N N 154 DA "C2'" "C1'" sing N N 155 DA "C2'" "H2'" sing N N 156 DA "C2'" "H2''" sing N N 157 DA "C1'" N9 sing N N 158 DA "C1'" "H1'" sing N N 159 DA N9 C8 sing Y N 160 DA N9 C4 sing Y N 161 DA C8 N7 doub Y N 162 DA C8 H8 sing N N 163 DA N7 C5 sing Y N 164 DA C5 C6 sing Y N 165 DA C5 C4 doub Y N 166 DA C6 N6 sing N N 167 DA C6 N1 doub Y N 168 DA N6 H61 sing N N 169 DA N6 H62 sing N N 170 DA N1 C2 sing Y N 171 DA C2 N3 doub Y N 172 DA C2 H2 sing N N 173 DA N3 C4 sing Y N 174 DC OP3 P sing N N 175 DC OP3 HOP3 sing N N 176 DC P OP1 doub N N 177 DC P OP2 sing N N 178 DC P "O5'" sing N N 179 DC OP2 HOP2 sing N N 180 DC "O5'" "C5'" sing N N 181 DC "C5'" "C4'" sing N N 182 DC "C5'" "H5'" sing N N 183 DC "C5'" "H5''" sing N N 184 DC "C4'" "O4'" sing N N 185 DC "C4'" "C3'" sing N N 186 DC "C4'" "H4'" sing N N 187 DC "O4'" "C1'" sing N N 188 DC "C3'" "O3'" sing N N 189 DC "C3'" "C2'" sing N N 190 DC "C3'" "H3'" sing N N 191 DC "O3'" "HO3'" sing N N 192 DC "C2'" "C1'" sing N N 193 DC "C2'" "H2'" sing N N 194 DC "C2'" "H2''" sing N N 195 DC "C1'" N1 sing N N 196 DC "C1'" "H1'" sing N N 197 DC N1 C2 sing N N 198 DC N1 C6 sing N N 199 DC C2 O2 doub N N 200 DC C2 N3 sing N N 201 DC N3 C4 doub N N 202 DC C4 N4 sing N N 203 DC C4 C5 sing N N 204 DC N4 H41 sing N N 205 DC N4 H42 sing N N 206 DC C5 C6 doub N N 207 DC C5 H5 sing N N 208 DC C6 H6 sing N N 209 DG OP3 P sing N N 210 DG OP3 HOP3 sing N N 211 DG P OP1 doub N N 212 DG P OP2 sing N N 213 DG P "O5'" sing N N 214 DG OP2 HOP2 sing N N 215 DG "O5'" "C5'" sing N N 216 DG "C5'" "C4'" sing N N 217 DG "C5'" "H5'" sing N N 218 DG "C5'" "H5''" sing N N 219 DG "C4'" "O4'" sing N N 220 DG "C4'" "C3'" sing N N 221 DG "C4'" "H4'" sing N N 222 DG "O4'" "C1'" sing N N 223 DG "C3'" "O3'" sing N N 224 DG "C3'" "C2'" sing N N 225 DG "C3'" "H3'" sing N N 226 DG "O3'" "HO3'" sing N N 227 DG "C2'" "C1'" sing N N 228 DG "C2'" "H2'" sing N N 229 DG "C2'" "H2''" sing N N 230 DG "C1'" N9 sing N N 231 DG "C1'" "H1'" sing N N 232 DG N9 C8 sing Y N 233 DG N9 C4 sing Y N 234 DG C8 N7 doub Y N 235 DG C8 H8 sing N N 236 DG N7 C5 sing Y N 237 DG C5 C6 sing N N 238 DG C5 C4 doub Y N 239 DG C6 O6 doub N N 240 DG C6 N1 sing N N 241 DG N1 C2 sing N N 242 DG N1 H1 sing N N 243 DG C2 N2 sing N N 244 DG C2 N3 doub N N 245 DG N2 H21 sing N N 246 DG N2 H22 sing N N 247 DG N3 C4 sing N N 248 DT OP3 P sing N N 249 DT OP3 HOP3 sing N N 250 DT P OP1 doub N N 251 DT P OP2 sing N N 252 DT P "O5'" sing N N 253 DT OP2 HOP2 sing N N 254 DT "O5'" "C5'" sing N N 255 DT "C5'" "C4'" sing N N 256 DT "C5'" "H5'" sing N N 257 DT "C5'" "H5''" sing N N 258 DT "C4'" "O4'" sing N N 259 DT "C4'" "C3'" sing N N 260 DT "C4'" "H4'" sing N N 261 DT "O4'" "C1'" sing N N 262 DT "C3'" "O3'" sing N N 263 DT "C3'" "C2'" sing N N 264 DT "C3'" "H3'" sing N N 265 DT "O3'" "HO3'" sing N N 266 DT "C2'" "C1'" sing N N 267 DT "C2'" "H2'" sing N N 268 DT "C2'" "H2''" sing N N 269 DT "C1'" N1 sing N N 270 DT "C1'" "H1'" sing N N 271 DT N1 C2 sing N N 272 DT N1 C6 sing N N 273 DT C2 O2 doub N N 274 DT C2 N3 sing N N 275 DT N3 C4 sing N N 276 DT N3 H3 sing N N 277 DT C4 O4 doub N N 278 DT C4 C5 sing N N 279 DT C5 C7 sing N N 280 DT C5 C6 doub N N 281 DT C7 H71 sing N N 282 DT C7 H72 sing N N 283 DT C7 H73 sing N N 284 DT C6 H6 sing N N 285 GLN N CA sing N N 286 GLN N H sing N N 287 GLN N H2 sing N N 288 GLN CA C sing N N 289 GLN CA CB sing N N 290 GLN CA HA sing N N 291 GLN C O doub N N 292 GLN C OXT sing N N 293 GLN CB CG sing N N 294 GLN CB HB2 sing N N 295 GLN CB HB3 sing N N 296 GLN CG CD sing N N 297 GLN CG HG2 sing N N 298 GLN CG HG3 sing N N 299 GLN CD OE1 doub N N 300 GLN CD NE2 sing N N 301 GLN NE2 HE21 sing N N 302 GLN NE2 HE22 sing N N 303 GLN OXT HXT sing N N 304 GLU N CA sing N N 305 GLU N H sing N N 306 GLU N H2 sing N N 307 GLU CA C sing N N 308 GLU CA CB sing N N 309 GLU CA HA sing N N 310 GLU C O doub N N 311 GLU C OXT sing N N 312 GLU CB CG sing N N 313 GLU CB HB2 sing N N 314 GLU CB HB3 sing N N 315 GLU CG CD sing N N 316 GLU CG HG2 sing N N 317 GLU CG HG3 sing N N 318 GLU CD OE1 doub N N 319 GLU CD OE2 sing N N 320 GLU OE2 HE2 sing N N 321 GLU OXT HXT sing N N 322 GLY N CA sing N N 323 GLY N H sing N N 324 GLY N H2 sing N N 325 GLY CA C sing N N 326 GLY CA HA2 sing N N 327 GLY CA HA3 sing N N 328 GLY C O doub N N 329 GLY C OXT sing N N 330 GLY OXT HXT sing N N 331 HIS N CA sing N N 332 HIS N H sing N N 333 HIS N H2 sing N N 334 HIS CA C sing N N 335 HIS CA CB sing N N 336 HIS CA HA sing N N 337 HIS C O doub N N 338 HIS C OXT sing N N 339 HIS CB CG sing N N 340 HIS CB HB2 sing N N 341 HIS CB HB3 sing N N 342 HIS CG ND1 sing Y N 343 HIS CG CD2 doub Y N 344 HIS ND1 CE1 doub Y N 345 HIS ND1 HD1 sing N N 346 HIS CD2 NE2 sing Y N 347 HIS CD2 HD2 sing N N 348 HIS CE1 NE2 sing Y N 349 HIS CE1 HE1 sing N N 350 HIS NE2 HE2 sing N N 351 HIS OXT HXT sing N N 352 HOH O H1 sing N N 353 HOH O H2 sing N N 354 ILE N CA sing N N 355 ILE N H sing N N 356 ILE N H2 sing N N 357 ILE CA C sing N N 358 ILE CA CB sing N N 359 ILE CA HA sing N N 360 ILE C O doub N N 361 ILE C OXT sing N N 362 ILE CB CG1 sing N N 363 ILE CB CG2 sing N N 364 ILE CB HB sing N N 365 ILE CG1 CD1 sing N N 366 ILE CG1 HG12 sing N N 367 ILE CG1 HG13 sing N N 368 ILE CG2 HG21 sing N N 369 ILE CG2 HG22 sing N N 370 ILE CG2 HG23 sing N N 371 ILE CD1 HD11 sing N N 372 ILE CD1 HD12 sing N N 373 ILE CD1 HD13 sing N N 374 ILE OXT HXT sing N N 375 LEU N CA sing N N 376 LEU N H sing N N 377 LEU N H2 sing N N 378 LEU CA C sing N N 379 LEU CA CB sing N N 380 LEU CA HA sing N N 381 LEU C O doub N N 382 LEU C OXT sing N N 383 LEU CB CG sing N N 384 LEU CB HB2 sing N N 385 LEU CB HB3 sing N N 386 LEU CG CD1 sing N N 387 LEU CG CD2 sing N N 388 LEU CG HG sing N N 389 LEU CD1 HD11 sing N N 390 LEU CD1 HD12 sing N N 391 LEU CD1 HD13 sing N N 392 LEU CD2 HD21 sing N N 393 LEU CD2 HD22 sing N N 394 LEU CD2 HD23 sing N N 395 LEU OXT HXT sing N N 396 LYS N CA sing N N 397 LYS N H sing N N 398 LYS N H2 sing N N 399 LYS CA C sing N N 400 LYS CA CB sing N N 401 LYS CA HA sing N N 402 LYS C O doub N N 403 LYS C OXT sing N N 404 LYS CB CG sing N N 405 LYS CB HB2 sing N N 406 LYS CB HB3 sing N N 407 LYS CG CD sing N N 408 LYS CG HG2 sing N N 409 LYS CG HG3 sing N N 410 LYS CD CE sing N N 411 LYS CD HD2 sing N N 412 LYS CD HD3 sing N N 413 LYS CE NZ sing N N 414 LYS CE HE2 sing N N 415 LYS CE HE3 sing N N 416 LYS NZ HZ1 sing N N 417 LYS NZ HZ2 sing N N 418 LYS NZ HZ3 sing N N 419 LYS OXT HXT sing N N 420 MET N CA sing N N 421 MET N H sing N N 422 MET N H2 sing N N 423 MET CA C sing N N 424 MET CA CB sing N N 425 MET CA HA sing N N 426 MET C O doub N N 427 MET C OXT sing N N 428 MET CB CG sing N N 429 MET CB HB2 sing N N 430 MET CB HB3 sing N N 431 MET CG SD sing N N 432 MET CG HG2 sing N N 433 MET CG HG3 sing N N 434 MET SD CE sing N N 435 MET CE HE1 sing N N 436 MET CE HE2 sing N N 437 MET CE HE3 sing N N 438 MET OXT HXT sing N N 439 PHE N CA sing N N 440 PHE N H sing N N 441 PHE N H2 sing N N 442 PHE CA C sing N N 443 PHE CA CB sing N N 444 PHE CA HA sing N N 445 PHE C O doub N N 446 PHE C OXT sing N N 447 PHE CB CG sing N N 448 PHE CB HB2 sing N N 449 PHE CB HB3 sing N N 450 PHE CG CD1 doub Y N 451 PHE CG CD2 sing Y N 452 PHE CD1 CE1 sing Y N 453 PHE CD1 HD1 sing N N 454 PHE CD2 CE2 doub Y N 455 PHE CD2 HD2 sing N N 456 PHE CE1 CZ doub Y N 457 PHE CE1 HE1 sing N N 458 PHE CE2 CZ sing Y N 459 PHE CE2 HE2 sing N N 460 PHE CZ HZ sing N N 461 PHE OXT HXT sing N N 462 PRO N CA sing N N 463 PRO N CD sing N N 464 PRO N H sing N N 465 PRO CA C sing N N 466 PRO CA CB sing N N 467 PRO CA HA sing N N 468 PRO C O doub N N 469 PRO C OXT sing N N 470 PRO CB CG sing N N 471 PRO CB HB2 sing N N 472 PRO CB HB3 sing N N 473 PRO CG CD sing N N 474 PRO CG HG2 sing N N 475 PRO CG HG3 sing N N 476 PRO CD HD2 sing N N 477 PRO CD HD3 sing N N 478 PRO OXT HXT sing N N 479 SER N CA sing N N 480 SER N H sing N N 481 SER N H2 sing N N 482 SER CA C sing N N 483 SER CA CB sing N N 484 SER CA HA sing N N 485 SER C O doub N N 486 SER C OXT sing N N 487 SER CB OG sing N N 488 SER CB HB2 sing N N 489 SER CB HB3 sing N N 490 SER OG HG sing N N 491 SER OXT HXT sing N N 492 THR N CA sing N N 493 THR N H sing N N 494 THR N H2 sing N N 495 THR CA C sing N N 496 THR CA CB sing N N 497 THR CA HA sing N N 498 THR C O doub N N 499 THR C OXT sing N N 500 THR CB OG1 sing N N 501 THR CB CG2 sing N N 502 THR CB HB sing N N 503 THR OG1 HG1 sing N N 504 THR CG2 HG21 sing N N 505 THR CG2 HG22 sing N N 506 THR CG2 HG23 sing N N 507 THR OXT HXT sing N N 508 TRP N CA sing N N 509 TRP N H sing N N 510 TRP N H2 sing N N 511 TRP CA C sing N N 512 TRP CA CB sing N N 513 TRP CA HA sing N N 514 TRP C O doub N N 515 TRP C OXT sing N N 516 TRP CB CG sing N N 517 TRP CB HB2 sing N N 518 TRP CB HB3 sing N N 519 TRP CG CD1 doub Y N 520 TRP CG CD2 sing Y N 521 TRP CD1 NE1 sing Y N 522 TRP CD1 HD1 sing N N 523 TRP CD2 CE2 doub Y N 524 TRP CD2 CE3 sing Y N 525 TRP NE1 CE2 sing Y N 526 TRP NE1 HE1 sing N N 527 TRP CE2 CZ2 sing Y N 528 TRP CE3 CZ3 doub Y N 529 TRP CE3 HE3 sing N N 530 TRP CZ2 CH2 doub Y N 531 TRP CZ2 HZ2 sing N N 532 TRP CZ3 CH2 sing Y N 533 TRP CZ3 HZ3 sing N N 534 TRP CH2 HH2 sing N N 535 TRP OXT HXT sing N N 536 TYR N CA sing N N 537 TYR N H sing N N 538 TYR N H2 sing N N 539 TYR CA C sing N N 540 TYR CA CB sing N N 541 TYR CA HA sing N N 542 TYR C O doub N N 543 TYR C OXT sing N N 544 TYR CB CG sing N N 545 TYR CB HB2 sing N N 546 TYR CB HB3 sing N N 547 TYR CG CD1 doub Y N 548 TYR CG CD2 sing Y N 549 TYR CD1 CE1 sing Y N 550 TYR CD1 HD1 sing N N 551 TYR CD2 CE2 doub Y N 552 TYR CD2 HD2 sing N N 553 TYR CE1 CZ doub Y N 554 TYR CE1 HE1 sing N N 555 TYR CE2 CZ sing Y N 556 TYR CE2 HE2 sing N N 557 TYR CZ OH sing N N 558 TYR OH HH sing N N 559 TYR OXT HXT sing N N 560 VAL N CA sing N N 561 VAL N H sing N N 562 VAL N H2 sing N N 563 VAL CA C sing N N 564 VAL CA CB sing N N 565 VAL CA HA sing N N 566 VAL C O doub N N 567 VAL C OXT sing N N 568 VAL CB CG1 sing N N 569 VAL CB CG2 sing N N 570 VAL CB HB sing N N 571 VAL CG1 HG11 sing N N 572 VAL CG1 HG12 sing N N 573 VAL CG1 HG13 sing N N 574 VAL CG2 HG21 sing N N 575 VAL CG2 HG22 sing N N 576 VAL CG2 HG23 sing N N 577 VAL OXT HXT sing N N 578 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5CG8 'double helix' 5CG8 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 14 1_555 1.287 0.107 0.518 11.768 -15.567 0.136 1 B_DA1:DT28_C B 1 ? C 28 ? 20 1 1 B DG 2 1_555 C DC 13 1_555 0.950 0.481 0.744 18.361 -29.426 8.742 2 B_DG2:DC27_C B 2 ? C 27 ? ? 1 1 B DA 3 1_555 C DT 12 1_555 -0.413 0.025 0.786 -3.342 -23.965 -0.690 3 B_DA3:DT26_C B 3 ? C 26 ? ? ? 1 B DA 4 1_555 C DT 11 1_555 -0.093 -0.126 0.121 -8.426 -16.602 -1.139 4 B_DA4:DT25_C B 4 ? C 25 ? 20 1 1 B DT 5 1_555 C DA 10 1_555 0.137 -0.166 0.717 -16.250 -13.019 -2.666 5 B_DT5:DA24_C B 5 ? C 24 ? 20 1 1 B DT 6 1_555 C DA 9 1_555 -0.806 -0.023 0.140 -1.799 -26.883 -8.810 6 B_DT6:DA23_C B 6 ? C 23 ? 20 1 1 B DC 7 1_555 C DG 8 1_555 -0.195 0.250 -0.772 -0.763 -8.565 10.619 7 B_DC7:DG22_C B 7 ? C 22 ? ? 1 1 B DC 8 1_555 C DG 7 1_555 0.237 0.147 -0.254 5.443 -2.700 9.882 8 B_DC8:DG21_C B 8 ? C 21 ? 19 1 1 B DT 10 1_555 C DA 5 1_555 -0.648 -0.023 0.520 -18.540 -26.061 12.123 9 B_DT10:DA19_C B 10 ? C 19 ? ? 1 1 B DT 11 1_555 C DA 4 1_555 0.618 0.120 0.374 -18.292 -18.266 0.467 10 B_DT11:DA18_C B 11 ? C 18 ? 20 1 1 B DC 12 1_555 C DG 3 1_555 -0.101 0.276 0.179 -12.734 -9.002 12.080 11 B_DC12:DG17_C B 12 ? C 17 ? ? 1 1 B DC 13 1_555 C DG 2 1_555 0.923 -0.115 -0.134 11.354 -14.257 5.094 12 B_DC13:DG16_C B 13 ? C 16 ? 19 1 1 B DA 14 1_555 C DT 1 1_555 -0.165 -0.178 0.316 10.932 -19.769 4.668 13 B_DA14:DT15_C B 14 ? C 15 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 14 1_555 B DG 2 1_555 C DC 13 1_555 0.281 -0.278 3.084 0.589 6.253 33.059 -1.436 -0.395 2.987 10.867 -1.024 33.634 1 BB_DA1DG2:DC27DT28_CC B 1 ? C 28 ? B 2 ? C 27 ? 1 B DG 2 1_555 C DC 13 1_555 B DA 3 1_555 C DT 12 1_555 -0.461 -0.297 3.323 -4.364 -2.103 36.744 -0.179 0.125 3.365 -3.318 6.886 37.051 2 BB_DG2DA3:DT26DC27_CC B 2 ? C 27 ? B 3 ? C 26 ? 1 B DA 3 1_555 C DT 12 1_555 B DA 4 1_555 C DT 11 1_555 -0.371 -0.821 3.428 3.895 -1.234 36.651 -1.123 1.139 3.397 -1.955 -6.170 36.870 3 BB_DA3DA4:DT25DT26_CC B 3 ? C 26 ? B 4 ? C 25 ? 1 B DA 4 1_555 C DT 11 1_555 B DT 5 1_555 C DA 10 1_555 -0.058 -0.979 3.523 -3.949 -5.476 37.699 -0.737 -0.456 3.612 -8.392 6.052 38.278 4 BB_DA4DT5:DA24DT25_CC B 4 ? C 25 ? B 5 ? C 24 ? 1 B DT 5 1_555 C DA 10 1_555 B DT 6 1_555 C DA 9 1_555 -0.275 -0.728 2.803 -0.455 -3.679 35.428 -0.726 0.392 2.865 -6.025 0.744 35.615 5 BB_DT5DT6:DA23DA24_CC B 5 ? C 24 ? B 6 ? C 23 ? 1 B DT 6 1_555 C DA 9 1_555 B DC 7 1_555 C DG 8 1_555 0.318 -0.699 3.394 5.380 -9.480 29.134 0.662 0.523 3.451 -18.067 -10.254 31.065 6 BB_DT6DC7:DG22DA23_CC B 6 ? C 23 ? B 7 ? C 22 ? 1 B DC 7 1_555 C DG 8 1_555 B DC 8 1_555 C DG 7 1_555 -0.966 0.006 3.289 -4.695 14.287 26.665 -2.925 0.868 3.028 28.297 9.299 30.547 7 BB_DC7DC8:DG21DG22_CC B 7 ? C 22 ? B 8 ? C 21 ? 1 B DC 8 1_555 C DG 7 1_555 B DT 10 1_555 C DA 5 1_555 0.136 -1.027 7.353 -0.967 44.131 50.299 -4.956 -0.213 5.097 43.643 0.956 65.958 8 BB_DC8DT10:DA19DG21_CC B 8 ? C 21 ? B 10 ? C 19 ? 1 B DT 10 1_555 C DA 5 1_555 B DT 11 1_555 C DA 4 1_555 -0.453 -0.125 3.274 -0.120 6.314 37.794 -0.980 0.675 3.214 9.665 0.183 38.298 9 BB_DT10DT11:DA18DA19_CC B 10 ? C 19 ? B 11 ? C 18 ? 1 B DT 11 1_555 C DA 4 1_555 B DC 12 1_555 C DG 3 1_555 0.801 0.244 3.086 3.078 -0.727 32.951 0.546 -0.911 3.140 -1.277 -5.411 33.098 10 BB_DT11DC12:DG17DA18_CC B 11 ? C 18 ? B 12 ? C 17 ? 1 B DC 12 1_555 C DG 3 1_555 B DC 13 1_555 C DG 2 1_555 -0.763 0.923 2.830 4.377 7.104 29.660 0.515 2.192 2.832 13.544 -8.344 30.786 11 BB_DC12DC13:DG16DG17_CC B 12 ? C 17 ? B 13 ? C 16 ? 1 B DC 13 1_555 C DG 2 1_555 B DA 14 1_555 C DT 1 1_555 -0.071 2.813 3.307 -0.027 -3.426 40.648 4.405 0.100 3.070 -4.921 0.039 40.786 12 BB_DC13DA14:DT15DG16_CC B 13 ? C 16 ? B 14 ? C 15 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM049245 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM105132 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '2-OXOGLUTARIC ACID' AKG 5 'MANGANESE (II) ION' MN 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4LT5 _pdbx_initial_refinement_model.details ? #