data_5CG9 # _entry.id 5CG9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CG9 pdb_00005cg9 10.2210/pdb5cg9/pdb WWPDB D_1000211547 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5CG8 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CG9 _pdbx_database_status.recvd_initial_deposition_date 2015-07-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hashimoto, H.' 1 'Pais, J.E.' 2 'Dai, N.' 3 'Zhang, X.' 4 'Zheng, Y.' 5 'Cheng, X.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 10713 _citation.page_last 10721 _citation.title 'Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv870 _citation.pdbx_database_id_PubMed 26323320 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hashimoto, H.' 1 ? primary 'Pais, J.E.' 2 ? primary 'Dai, N.' 3 ? primary 'Correa, I.R.' 4 ? primary 'Zhang, X.' 5 ? primary 'Zheng, Y.' 6 ? primary 'Cheng, X.' 7 ? # _cell.entry_id 5CG9 _cell.length_a 191.216 _cell.length_b 191.216 _cell.length_c 51.254 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CG9 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tet-like dioxygenase' 30725.766 2 ? ? 'UNP residues 57-321' ? 2 polymer syn ;DNA (5'-D(P*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3') ; 3334.186 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3') ; 4021.636 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 5 non-polymer syn '2-OXOGLUTARIC ACID' 146.098 2 ? ? ? ? 6 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 7 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 8 water nat water 18.015 14 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HMINKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTG RKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFN SLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVY FAHKGSKTKPYYEDTQKNSLKIHKETK ; ;HMINKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTG RKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFN SLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVY FAHKGSKTKPYYEDTQKNSLKIHKETK ; A,D ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DT)(DG)(DC)(DG)(DC)(DT)(DG)(DA)(DC)' CATGCGCTGAC B,E ? 3 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(DC)(DA)(DG)(5CM)(DG)(DC)(DA)(DT)(DG)(DG)' TGTCAGCGCATGG C,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 ILE n 1 4 ASN n 1 5 LYS n 1 6 LYS n 1 7 SER n 1 8 LEU n 1 9 LEU n 1 10 GLN n 1 11 ASN n 1 12 LEU n 1 13 LEU n 1 14 SER n 1 15 LYS n 1 16 CYS n 1 17 LYS n 1 18 THR n 1 19 THR n 1 20 PHE n 1 21 GLN n 1 22 GLN n 1 23 SER n 1 24 PHE n 1 25 THR n 1 26 ASN n 1 27 ALA n 1 28 ASN n 1 29 ILE n 1 30 THR n 1 31 LEU n 1 32 LYS n 1 33 ASP n 1 34 GLU n 1 35 LYS n 1 36 TRP n 1 37 LEU n 1 38 LYS n 1 39 ASN n 1 40 VAL n 1 41 ARG n 1 42 THR n 1 43 ALA n 1 44 TYR n 1 45 PHE n 1 46 VAL n 1 47 CYS n 1 48 ASP n 1 49 HIS n 1 50 ASP n 1 51 GLY n 1 52 SER n 1 53 VAL n 1 54 GLU n 1 55 LEU n 1 56 ALA n 1 57 TYR n 1 58 LEU n 1 59 PRO n 1 60 ASN n 1 61 VAL n 1 62 LEU n 1 63 PRO n 1 64 LYS n 1 65 GLU n 1 66 LEU n 1 67 VAL n 1 68 GLU n 1 69 GLU n 1 70 PHE n 1 71 THR n 1 72 GLU n 1 73 LYS n 1 74 PHE n 1 75 GLU n 1 76 SER n 1 77 ILE n 1 78 GLN n 1 79 THR n 1 80 GLY n 1 81 ARG n 1 82 LYS n 1 83 LYS n 1 84 ASP n 1 85 THR n 1 86 GLY n 1 87 TYR n 1 88 SER n 1 89 GLY n 1 90 ILE n 1 91 LEU n 1 92 ASP n 1 93 ASN n 1 94 SER n 1 95 MET n 1 96 PRO n 1 97 PHE n 1 98 ASN n 1 99 TYR n 1 100 VAL n 1 101 THR n 1 102 ALA n 1 103 ASP n 1 104 LEU n 1 105 SER n 1 106 GLN n 1 107 GLU n 1 108 LEU n 1 109 GLY n 1 110 GLN n 1 111 TYR n 1 112 LEU n 1 113 SER n 1 114 GLU n 1 115 ILE n 1 116 VAL n 1 117 ASN n 1 118 PRO n 1 119 GLN n 1 120 ILE n 1 121 ASN n 1 122 TYR n 1 123 TYR n 1 124 ILE n 1 125 SER n 1 126 LYS n 1 127 LEU n 1 128 LEU n 1 129 THR n 1 130 CYS n 1 131 VAL n 1 132 SER n 1 133 SER n 1 134 ARG n 1 135 THR n 1 136 ILE n 1 137 ASN n 1 138 TYR n 1 139 LEU n 1 140 VAL n 1 141 SER n 1 142 LEU n 1 143 ASN n 1 144 ASP n 1 145 SER n 1 146 TYR n 1 147 TYR n 1 148 ALA n 1 149 LEU n 1 150 ASN n 1 151 ASN n 1 152 CYS n 1 153 LEU n 1 154 TYR n 1 155 PRO n 1 156 SER n 1 157 THR n 1 158 ALA n 1 159 PHE n 1 160 ASN n 1 161 SER n 1 162 LEU n 1 163 LYS n 1 164 PRO n 1 165 SER n 1 166 ASN n 1 167 ASP n 1 168 GLY n 1 169 HIS n 1 170 ARG n 1 171 ILE n 1 172 ARG n 1 173 LYS n 1 174 PRO n 1 175 HIS n 1 176 LYS n 1 177 ASP n 1 178 ASN n 1 179 LEU n 1 180 ASP n 1 181 ILE n 1 182 THR n 1 183 PRO n 1 184 SER n 1 185 SER n 1 186 LEU n 1 187 PHE n 1 188 TYR n 1 189 PHE n 1 190 GLY n 1 191 ASN n 1 192 PHE n 1 193 GLN n 1 194 ASN n 1 195 THR n 1 196 GLU n 1 197 GLY n 1 198 TYR n 1 199 LEU n 1 200 GLU n 1 201 LEU n 1 202 THR n 1 203 ASP n 1 204 LYS n 1 205 ASN n 1 206 CYS n 1 207 LYS n 1 208 VAL n 1 209 PHE n 1 210 VAL n 1 211 GLN n 1 212 PRO n 1 213 GLY n 1 214 ASP n 1 215 VAL n 1 216 LEU n 1 217 PHE n 1 218 PHE n 1 219 LYS n 1 220 GLY n 1 221 ASN n 1 222 GLU n 1 223 TYR n 1 224 LYS n 1 225 HIS n 1 226 VAL n 1 227 VAL n 1 228 ALA n 1 229 ASN n 1 230 ILE n 1 231 THR n 1 232 SER n 1 233 GLY n 1 234 TRP n 1 235 ARG n 1 236 ILE n 1 237 GLY n 1 238 LEU n 1 239 VAL n 1 240 TYR n 1 241 PHE n 1 242 ALA n 1 243 HIS n 1 244 LYS n 1 245 GLY n 1 246 SER n 1 247 LYS n 1 248 THR n 1 249 LYS n 1 250 PRO n 1 251 TYR n 1 252 TYR n 1 253 GLU n 1 254 ASP n 1 255 THR n 1 256 GLN n 1 257 LYS n 1 258 ASN n 1 259 SER n 1 260 LEU n 1 261 LYS n 1 262 ILE n 1 263 HIS n 1 264 LYS n 1 265 GLU n 1 266 THR n 1 267 LYS n 2 1 DC n 2 2 DA n 2 3 DT n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DT n 2 9 DG n 2 10 DA n 2 11 DC n 3 1 DT n 3 2 DG n 3 3 DT n 3 4 DC n 3 5 DA n 3 6 DG n 3 7 5CM n 3 8 DG n 3 9 DC n 3 10 DA n 3 11 DT n 3 12 DG n 3 13 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 267 _entity_src_gen.gene_src_common_name Amoeba _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NAEGRDRAFT_55029 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Naegleria gruberi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5762 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b-His-sumo _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 11 'synthetic construct' ? 32630 ? 3 1 sample 1 13 'synthetic construct' ? 32630 ? # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.seq_align _struct_ref.seq_dif _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end D2W6T1_NAEGR UNP ? 1 1 ? ? D2W6T1 ? ;INKKSLLQNLLSKCKTTFQQSFTNANITLKDEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTGRK KDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFNSL KPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQPGDVLFFKGNEYKHVVANITSGWRIGLVYFA HKGSKTKPYYEDTQKNSLKIHKETK ; 57 ? 5CG9 PDB ? 2 2 ? ? 5CG9 ? ? 1 ? 5CG9 PDB ? 3 3 ? ? 5CG9 ? ? 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5CG9 A 3 ? 267 ? D2W6T1 57 ? 321 ? 57 321 2 2 5CG9 B 1 ? 11 ? 5CG9 3 ? 13 ? 3 13 3 3 5CG9 C 1 ? 13 ? 5CG9 14 ? 26 ? 14 26 4 1 5CG9 D 3 ? 267 ? D2W6T1 57 ? 321 ? 57 321 5 2 5CG9 E 1 ? 11 ? 5CG9 3 ? 13 ? 3 13 6 3 5CG9 F 1 ? 13 ? 5CG9 14 ? 26 ? 14 26 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CG9 HIS A 1 ? UNP D2W6T1 ? ? 'expression tag' 55 1 1 5CG9 MET A 2 ? UNP D2W6T1 ? ? 'expression tag' 56 2 4 5CG9 HIS D 1 ? UNP D2W6T1 ? ? 'expression tag' 55 3 4 5CG9 MET D 2 ? UNP D2W6T1 ? ? 'expression tag' 56 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 AKG non-polymer . '2-OXOGLUTARIC ACID' ? 'C5 H6 O5' 146.098 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CG9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.55 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% (w/v) polyethylene glycol 8000, 200 mM Mg oxaloacetate, 100 mM Na cacodylate, pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CG9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.69 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 29462 _reflns.number_obs 29462 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.percent_possible_obs 98.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.3 _reflns.pdbx_Rmerge_I_obs 0.154 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.69 _reflns_shell.d_res_low 2.79 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 92.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.894 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5CG9 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 29452 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.742 _refine.ls_d_res_high 2.693 _refine.ls_percent_reflns_obs 98.54 _refine.ls_R_factor_obs 0.1942 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1927 _refine.ls_R_factor_R_free 0.2222 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.07 _refine.ls_number_reflns_R_free 1492 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 4LT5 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.36 _refine.pdbx_overall_phase_error 27.20 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4201 _refine_hist.pdbx_number_atoms_nucleic_acid 953 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 5213 _refine_hist.d_res_high 2.693 _refine_hist.d_res_low 29.742 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 5420 'X-RAY DIFFRACTION' ? f_angle_d 0.788 ? ? 7541 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.091 ? ? 2004 'X-RAY DIFFRACTION' ? f_chiral_restr 0.033 ? ? 836 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 809 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.6933 2.7802 2280 0.2944 90.00 0.3734 . . 122 . . 'X-RAY DIFFRACTION' . 2.7802 2.8795 2455 0.2822 96.00 0.3048 . . 131 . . 'X-RAY DIFFRACTION' . 2.8795 2.9947 2568 0.2731 100.00 0.3211 . . 136 . . 'X-RAY DIFFRACTION' . 2.9947 3.1308 2537 0.2609 100.00 0.2980 . . 135 . . 'X-RAY DIFFRACTION' . 3.1308 3.2957 2570 0.2447 100.00 0.2917 . . 137 . . 'X-RAY DIFFRACTION' . 3.2957 3.5019 2569 0.2352 100.00 0.2890 . . 133 . . 'X-RAY DIFFRACTION' . 3.5019 3.7718 2573 0.2165 100.00 0.2389 . . 141 . . 'X-RAY DIFFRACTION' . 3.7718 4.1504 2576 0.1876 100.00 0.2241 . . 137 . . 'X-RAY DIFFRACTION' . 4.1504 4.7489 2587 0.1558 100.00 0.1619 . . 137 . . 'X-RAY DIFFRACTION' . 4.7489 5.9751 2596 0.1586 100.00 0.1762 . . 142 . . 'X-RAY DIFFRACTION' . 5.9751 29.7441 2649 0.1514 99.00 0.1863 . . 141 . . # _struct.entry_id 5CG9 _struct.title 'NgTET1 in complex with 5mC DNA in space group P3221' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CG9 _struct_keywords.text 'dioxygenase, 5-methylcytosine, NgTET1, OXIDOREDUCTASE-DNA complex' _struct_keywords.pdbx_keywords OXIDOREDUCTASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 4 ? K N N 4 ? L N N 7 ? M N N 5 ? N N N 6 ? O N N 7 ? P N N 8 ? Q N N 8 ? R N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 4 ? GLN A 21 ? ASN A 58 GLN A 75 1 ? 18 HELX_P HELX_P2 AA2 PRO A 63 ? GLY A 80 ? PRO A 117 GLY A 134 1 ? 18 HELX_P HELX_P3 AA3 ALA A 102 ? SER A 105 ? ALA A 156 SER A 159 5 ? 4 HELX_P HELX_P4 AA4 GLN A 106 ? ILE A 115 ? GLN A 160 ILE A 169 1 ? 10 HELX_P HELX_P5 AA5 ILE A 115 ? VAL A 131 ? ILE A 169 VAL A 185 1 ? 17 HELX_P HELX_P6 AA6 SER A 132 ? VAL A 140 ? SER A 186 VAL A 194 1 ? 9 HELX_P HELX_P7 AA7 ASN A 143 ? ASN A 151 ? ASN A 197 ASN A 205 1 ? 9 HELX_P HELX_P8 AA8 HIS A 169 ? LYS A 173 ? HIS A 223 LYS A 227 5 ? 5 HELX_P HELX_P9 AA9 HIS A 243 ? LYS A 249 ? HIS A 297 LYS A 303 1 ? 7 HELX_P HELX_P10 AB1 THR A 255 ? LYS A 267 ? THR A 309 LYS A 321 1 ? 13 HELX_P HELX_P11 AB2 ASN D 4 ? GLN D 21 ? ASN D 58 GLN D 75 1 ? 18 HELX_P HELX_P12 AB3 PRO D 63 ? GLY D 80 ? PRO D 117 GLY D 134 1 ? 18 HELX_P HELX_P13 AB4 GLN D 106 ? ILE D 115 ? GLN D 160 ILE D 169 1 ? 10 HELX_P HELX_P14 AB5 ILE D 115 ? SER D 132 ? ILE D 169 SER D 186 1 ? 18 HELX_P HELX_P15 AB6 SER D 132 ? VAL D 140 ? SER D 186 VAL D 194 1 ? 9 HELX_P HELX_P16 AB7 ASN D 143 ? ASN D 151 ? ASN D 197 ASN D 205 1 ? 9 HELX_P HELX_P17 AB8 HIS D 243 ? LYS D 249 ? HIS D 297 LYS D 303 1 ? 7 HELX_P HELX_P18 AB9 GLN D 256 ? THR D 266 ? GLN D 310 THR D 320 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DG 6 "O3'" ? ? ? 1_555 C 5CM 7 P ? ? C DG 19 C 5CM 20 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale2 covale both ? C 5CM 7 "O3'" ? ? ? 1_555 C DG 8 P ? ? C 5CM 20 C DG 21 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale3 covale both ? F DG 6 "O3'" ? ? ? 1_555 F 5CM 7 P ? ? F DG 19 F 5CM 20 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale4 covale both ? F 5CM 7 "O3'" ? ? ? 1_555 F DG 8 P ? ? F 5CM 20 F DG 21 1_555 ? ? ? ? ? ? ? 1.610 ? ? metalc1 metalc ? ? A HIS 175 NE2 ? ? ? 1_555 I MN . MN ? ? A HIS 229 A MN 403 1_555 ? ? ? ? ? ? ? 2.141 ? ? metalc2 metalc ? ? A ASP 177 OD2 ? ? ? 1_555 I MN . MN ? ? A ASP 231 A MN 403 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc3 metalc ? ? A HIS 225 NE2 ? ? ? 1_555 I MN . MN ? ? A HIS 279 A MN 403 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc4 metalc ? ? H AKG . O2 ? ? ? 1_555 I MN . MN ? ? A AKG 402 A MN 403 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc5 metalc ? ? H AKG . O5 ? ? ? 1_555 I MN . MN ? ? A AKG 402 A MN 403 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc6 metalc ? ? I MN . MN ? ? ? 1_555 P HOH . O ? ? A MN 403 A HOH 501 1_555 ? ? ? ? ? ? ? 2.198 ? ? metalc7 metalc ? ? D HIS 175 NE2 ? ? ? 1_555 N MN . MN ? ? D HIS 229 D MN 405 1_555 ? ? ? ? ? ? ? 2.319 ? ? metalc8 metalc ? ? D ASP 177 OD2 ? ? ? 1_555 N MN . MN ? ? D ASP 231 D MN 405 1_555 ? ? ? ? ? ? ? 2.165 ? ? metalc9 metalc ? ? D HIS 225 NE2 ? ? ? 1_555 N MN . MN ? ? D HIS 279 D MN 405 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc10 metalc ? ? M AKG . O2 ? ? ? 1_555 N MN . MN ? ? D AKG 404 D MN 405 1_555 ? ? ? ? ? ? ? 1.912 ? ? metalc11 metalc ? ? M AKG . O5 ? ? ? 1_555 N MN . MN ? ? D AKG 404 D MN 405 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc12 metalc ? ? N MN . MN ? ? ? 1_555 R HOH . O ? ? D MN 405 D HOH 501 1_555 ? ? ? ? ? ? ? 2.219 ? ? hydrog1 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 4 C DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 4 C DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 5 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 5 C DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 6 C DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 6 C DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 6 C DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 7 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 7 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 7 C DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 9 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 9 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 9 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 10 C DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 10 C DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 11 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 11 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 11 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 12 C DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 12 C DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 13 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 13 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 13 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E DC 1 N4 ? ? ? 1_555 F DG 13 O6 ? ? E DC 3 F DG 26 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog25 hydrog ? ? E DA 2 N1 ? ? ? 1_555 F DT 11 N3 ? ? E DA 4 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? E DA 2 N6 ? ? ? 1_555 F DT 11 O4 ? ? E DA 4 F DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E DT 3 N3 ? ? ? 1_555 F DA 10 N1 ? ? E DT 5 F DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E DT 3 O4 ? ? ? 1_555 F DA 10 N6 ? ? E DT 5 F DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 9 N3 ? ? E DG 6 F DC 22 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog30 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 8 N2 ? ? E DC 7 F DG 21 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog31 hydrog ? ? E DC 7 N3 ? ? ? 1_555 F DG 6 N1 ? ? E DC 9 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DC 7 N4 ? ? ? 1_555 F DG 6 O6 ? ? E DC 9 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DC 7 O2 ? ? ? 1_555 F DG 6 N2 ? ? E DC 9 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 5 N1 ? ? E DT 10 F DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 5 N6 ? ? E DT 10 F DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 4 N3 ? ? E DG 11 F DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 4 O2 ? ? E DG 11 F DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 4 N4 ? ? E DG 11 F DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DA 10 N1 ? ? ? 1_555 F DT 3 N3 ? ? E DA 12 F DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DA 10 N6 ? ? ? 1_555 F DT 3 O4 ? ? E DA 12 F DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 2 N1 ? ? E DC 13 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 2 O6 ? ? E DC 13 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 2 N2 ? ? E DC 13 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 4 ? AA3 ? 10 ? AA4 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA3 7 8 ? anti-parallel AA3 8 9 ? anti-parallel AA3 9 10 ? parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 28 ? LEU A 31 ? ASN A 82 LEU A 85 AA1 2 TYR A 44 ? CYS A 47 ? TYR A 98 CYS A 101 AA1 3 VAL A 53 ? LEU A 58 ? VAL A 107 LEU A 112 AA1 4 VAL A 215 ? PHE A 218 ? VAL A 269 PHE A 272 AA1 5 SER A 184 ? ASN A 191 ? SER A 238 ASN A 245 AA1 6 TRP A 234 ? PHE A 241 ? TRP A 288 PHE A 295 AA1 7 SER A 156 ? LEU A 162 ? SER A 210 LEU A 216 AA1 8 THR A 85 ? LEU A 91 ? THR A 139 LEU A 145 AA1 9 TYR A 99 ? VAL A 100 ? TYR A 153 VAL A 154 AA2 1 ASN A 39 ? VAL A 40 ? ASN A 93 VAL A 94 AA2 2 CYS A 206 ? VAL A 208 ? CYS A 260 VAL A 262 AA2 3 LEU A 199 ? LEU A 201 ? LEU A 253 LEU A 255 AA2 4 HIS A 225 ? VAL A 227 ? HIS A 279 VAL A 281 AA3 1 ASN D 28 ? LEU D 31 ? ASN D 82 LEU D 85 AA3 2 TYR D 44 ? CYS D 47 ? TYR D 98 CYS D 101 AA3 3 VAL D 53 ? LEU D 58 ? VAL D 107 LEU D 112 AA3 4 VAL D 215 ? PHE D 218 ? VAL D 269 PHE D 272 AA3 5 SER D 184 ? ASN D 191 ? SER D 238 ASN D 245 AA3 6 TRP D 234 ? PHE D 241 ? TRP D 288 PHE D 295 AA3 7 SER D 156 ? LEU D 162 ? SER D 210 LEU D 216 AA3 8 THR D 85 ? LEU D 91 ? THR D 139 LEU D 145 AA3 9 ASN D 98 ? VAL D 100 ? ASN D 152 VAL D 154 AA3 10 TYR D 251 ? THR D 255 ? TYR D 305 THR D 309 AA4 1 ASN D 39 ? VAL D 40 ? ASN D 93 VAL D 94 AA4 2 CYS D 206 ? VAL D 208 ? CYS D 260 VAL D 262 AA4 3 LEU D 199 ? LEU D 201 ? LEU D 253 LEU D 255 AA4 4 HIS D 225 ? VAL D 227 ? HIS D 279 VAL D 281 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 30 ? N THR A 84 O PHE A 45 ? O PHE A 99 AA1 2 3 N TYR A 44 ? N TYR A 98 O TYR A 57 ? O TYR A 111 AA1 3 4 N ALA A 56 ? N ALA A 110 O PHE A 217 ? O PHE A 271 AA1 4 5 O LEU A 216 ? O LEU A 270 N LEU A 186 ? N LEU A 240 AA1 5 6 N PHE A 189 ? N PHE A 243 O ILE A 236 ? O ILE A 290 AA1 6 7 O ARG A 235 ? O ARG A 289 N LEU A 162 ? N LEU A 216 AA1 7 8 O PHE A 159 ? O PHE A 213 N GLY A 86 ? N GLY A 140 AA1 8 9 N LEU A 91 ? N LEU A 145 O TYR A 99 ? O TYR A 153 AA2 1 2 N VAL A 40 ? N VAL A 94 O LYS A 207 ? O LYS A 261 AA2 2 3 O CYS A 206 ? O CYS A 260 N LEU A 201 ? N LEU A 255 AA2 3 4 N GLU A 200 ? N GLU A 254 O VAL A 226 ? O VAL A 280 AA3 1 2 N ASN D 28 ? N ASN D 82 O PHE D 45 ? O PHE D 99 AA3 2 3 N VAL D 46 ? N VAL D 100 O LEU D 55 ? O LEU D 109 AA3 3 4 N ALA D 56 ? N ALA D 110 O PHE D 217 ? O PHE D 271 AA3 4 5 O LEU D 216 ? O LEU D 270 N LEU D 186 ? N LEU D 240 AA3 5 6 N PHE D 189 ? N PHE D 243 O ILE D 236 ? O ILE D 290 AA3 6 7 O VAL D 239 ? O VAL D 293 N ALA D 158 ? N ALA D 212 AA3 7 8 O PHE D 159 ? O PHE D 213 N GLY D 86 ? N GLY D 140 AA3 8 9 N LEU D 91 ? N LEU D 145 O TYR D 99 ? O TYR D 153 AA3 9 10 N VAL D 100 ? N VAL D 154 O ASP D 254 ? O ASP D 308 AA4 1 2 N VAL D 40 ? N VAL D 94 O LYS D 207 ? O LYS D 261 AA4 2 3 O VAL D 208 ? O VAL D 262 N LEU D 199 ? N LEU D 253 AA4 3 4 N GLU D 200 ? N GLU D 254 O VAL D 226 ? O VAL D 280 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 401 ? 4 'binding site for residue SO4 A 401' AC2 Software A AKG 402 ? 14 'binding site for residue AKG A 402' AC3 Software A MN 403 ? 5 'binding site for residue MN A 403' AC4 Software D SO4 401 ? 5 'binding site for residue SO4 D 401' AC5 Software D SO4 402 ? 4 'binding site for residue SO4 D 402' AC6 Software D EDO 403 ? 2 'binding site for residue EDO D 403' AC7 Software D AKG 404 ? 14 'binding site for residue AKG D 404' AC8 Software D MN 405 ? 5 'binding site for residue MN D 405' AC9 Software F EDO 101 ? 3 'binding site for residue EDO F 101' AD1 Software F DG 19 ? 14 'binding site for Di-nucleotide DG F 19 and 5CM F 20' AD2 Software F 5CM 20 ? 14 'binding site for Di-nucleotide 5CM F 20 and DG F 21' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 114 ? GLU A 168 . ? 1_555 ? 2 AC1 4 ALA A 148 ? ALA A 202 . ? 1_555 ? 3 AC1 4 ASN A 151 ? ASN A 205 . ? 1_555 ? 4 AC1 4 EDO L . ? EDO D 403 . ? 1_555 ? 5 AC2 14 ASN A 160 ? ASN A 214 . ? 1_555 ? 6 AC2 14 ARG A 170 ? ARG A 224 . ? 1_555 ? 7 AC2 14 HIS A 175 ? HIS A 229 . ? 1_555 ? 8 AC2 14 ASP A 177 ? ASP A 231 . ? 1_555 ? 9 AC2 14 LEU A 186 ? LEU A 240 . ? 1_555 ? 10 AC2 14 TYR A 188 ? TYR A 242 . ? 1_555 ? 11 AC2 14 LEU A 199 ? LEU A 253 . ? 1_555 ? 12 AC2 14 HIS A 225 ? HIS A 279 . ? 1_555 ? 13 AC2 14 VAL A 227 ? VAL A 281 . ? 1_555 ? 14 AC2 14 ARG A 235 ? ARG A 289 . ? 1_555 ? 15 AC2 14 VAL A 239 ? VAL A 293 . ? 1_555 ? 16 AC2 14 MN I . ? MN A 403 . ? 1_555 ? 17 AC2 14 HOH P . ? HOH A 501 . ? 1_555 ? 18 AC2 14 5CM C 7 ? 5CM C 20 . ? 1_555 ? 19 AC3 5 HIS A 175 ? HIS A 229 . ? 1_555 ? 20 AC3 5 ASP A 177 ? ASP A 231 . ? 1_555 ? 21 AC3 5 HIS A 225 ? HIS A 279 . ? 1_555 ? 22 AC3 5 AKG H . ? AKG A 402 . ? 1_555 ? 23 AC3 5 HOH P . ? HOH A 501 . ? 1_555 ? 24 AC4 5 ASN A 121 ? ASN A 175 . ? 1_555 ? 25 AC4 5 TYR A 147 ? TYR A 201 . ? 1_555 ? 26 AC4 5 ASN A 151 ? ASN A 205 . ? 1_555 ? 27 AC4 5 ASN D 121 ? ASN D 175 . ? 1_555 ? 28 AC4 5 TYR D 147 ? TYR D 201 . ? 1_555 ? 29 AC5 4 GLU D 114 ? GLU D 168 . ? 1_555 ? 30 AC5 4 ALA D 148 ? ALA D 202 . ? 1_555 ? 31 AC5 4 ASN D 151 ? ASN D 205 . ? 1_555 ? 32 AC5 4 EDO L . ? EDO D 403 . ? 1_555 ? 33 AC6 2 SO4 G . ? SO4 A 401 . ? 1_555 ? 34 AC6 2 SO4 K . ? SO4 D 402 . ? 1_555 ? 35 AC7 14 ASN D 160 ? ASN D 214 . ? 1_555 ? 36 AC7 14 ARG D 170 ? ARG D 224 . ? 1_555 ? 37 AC7 14 HIS D 175 ? HIS D 229 . ? 1_555 ? 38 AC7 14 ASP D 177 ? ASP D 231 . ? 1_555 ? 39 AC7 14 LEU D 186 ? LEU D 240 . ? 1_555 ? 40 AC7 14 TYR D 188 ? TYR D 242 . ? 1_555 ? 41 AC7 14 LEU D 199 ? LEU D 253 . ? 1_555 ? 42 AC7 14 HIS D 225 ? HIS D 279 . ? 1_555 ? 43 AC7 14 VAL D 227 ? VAL D 281 . ? 1_555 ? 44 AC7 14 ARG D 235 ? ARG D 289 . ? 1_555 ? 45 AC7 14 VAL D 239 ? VAL D 293 . ? 1_555 ? 46 AC7 14 MN N . ? MN D 405 . ? 1_555 ? 47 AC7 14 HOH R . ? HOH D 501 . ? 1_555 ? 48 AC7 14 5CM F 7 ? 5CM F 20 . ? 1_555 ? 49 AC8 5 HIS D 175 ? HIS D 229 . ? 1_555 ? 50 AC8 5 ASP D 177 ? ASP D 231 . ? 1_555 ? 51 AC8 5 HIS D 225 ? HIS D 279 . ? 1_555 ? 52 AC8 5 AKG M . ? AKG D 404 . ? 1_555 ? 53 AC8 5 HOH R . ? HOH D 501 . ? 1_555 ? 54 AC9 3 DG E 6 ? DG E 8 . ? 1_555 ? 55 AC9 3 DA F 5 ? DA F 18 . ? 1_555 ? 56 AC9 3 DG F 6 ? DG F 19 . ? 1_555 ? 57 AD1 14 TYR D 87 ? TYR D 141 . ? 1_555 ? 58 AD1 14 ASN D 93 ? ASN D 147 . ? 1_555 ? 59 AD1 14 ARG D 170 ? ARG D 224 . ? 1_555 ? 60 AD1 14 ASP D 180 ? ASP D 234 . ? 1_555 ? 61 AD1 14 VAL D 239 ? VAL D 293 . ? 1_555 ? 62 AD1 14 PHE D 241 ? PHE D 295 . ? 1_555 ? 63 AD1 14 HIS D 243 ? HIS D 297 . ? 1_555 ? 64 AD1 14 AKG M . ? AKG D 404 . ? 1_555 ? 65 AD1 14 DG E 6 ? DG E 8 . ? 1_555 ? 66 AD1 14 DC E 7 ? DC E 9 . ? 1_555 ? 67 AD1 14 DT E 8 ? DT E 10 . ? 1_555 ? 68 AD1 14 DA F 5 ? DA F 18 . ? 1_555 ? 69 AD1 14 DG F 8 ? DG F 21 . ? 1_555 ? 70 AD1 14 EDO O . ? EDO F 101 . ? 1_555 ? 71 AD2 14 TYR D 87 ? TYR D 141 . ? 1_555 ? 72 AD2 14 ASN D 93 ? ASN D 147 . ? 1_555 ? 73 AD2 14 TYR D 99 ? TYR D 153 . ? 1_555 ? 74 AD2 14 ARG D 170 ? ARG D 224 . ? 1_555 ? 75 AD2 14 ASP D 180 ? ASP D 234 . ? 1_555 ? 76 AD2 14 VAL D 239 ? VAL D 293 . ? 1_555 ? 77 AD2 14 PHE D 241 ? PHE D 295 . ? 1_555 ? 78 AD2 14 HIS D 243 ? HIS D 297 . ? 1_555 ? 79 AD2 14 GLN D 256 ? GLN D 310 . ? 1_555 ? 80 AD2 14 AKG M . ? AKG D 404 . ? 1_555 ? 81 AD2 14 DG E 4 ? DG E 6 . ? 1_555 ? 82 AD2 14 DC E 5 ? DC E 7 . ? 1_555 ? 83 AD2 14 DG F 6 ? DG F 19 . ? 1_555 ? 84 AD2 14 DC F 9 ? DC F 22 . ? 1_555 ? # _atom_sites.entry_id 5CG9 _atom_sites.fract_transf_matrix[1][1] 0.005230 _atom_sites.fract_transf_matrix[1][2] 0.003019 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006039 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019511 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 55 55 HIS HIS A . n A 1 2 MET 2 56 56 MET MET A . n A 1 3 ILE 3 57 57 ILE ILE A . n A 1 4 ASN 4 58 58 ASN ASN A . n A 1 5 LYS 5 59 59 LYS LYS A . n A 1 6 LYS 6 60 60 LYS LYS A . n A 1 7 SER 7 61 61 SER SER A . n A 1 8 LEU 8 62 62 LEU LEU A . n A 1 9 LEU 9 63 63 LEU LEU A . n A 1 10 GLN 10 64 64 GLN GLN A . n A 1 11 ASN 11 65 65 ASN ASN A . n A 1 12 LEU 12 66 66 LEU LEU A . n A 1 13 LEU 13 67 67 LEU LEU A . n A 1 14 SER 14 68 68 SER SER A . n A 1 15 LYS 15 69 69 LYS LYS A . n A 1 16 CYS 16 70 70 CYS CYS A . n A 1 17 LYS 17 71 71 LYS LYS A . n A 1 18 THR 18 72 72 THR THR A . n A 1 19 THR 19 73 73 THR THR A . n A 1 20 PHE 20 74 74 PHE PHE A . n A 1 21 GLN 21 75 75 GLN GLN A . n A 1 22 GLN 22 76 76 GLN GLN A . n A 1 23 SER 23 77 77 SER SER A . n A 1 24 PHE 24 78 78 PHE PHE A . n A 1 25 THR 25 79 79 THR THR A . n A 1 26 ASN 26 80 80 ASN ASN A . n A 1 27 ALA 27 81 81 ALA ALA A . n A 1 28 ASN 28 82 82 ASN ASN A . n A 1 29 ILE 29 83 83 ILE ILE A . n A 1 30 THR 30 84 84 THR THR A . n A 1 31 LEU 31 85 85 LEU LEU A . n A 1 32 LYS 32 86 86 LYS LYS A . n A 1 33 ASP 33 87 87 ASP ASP A . n A 1 34 GLU 34 88 88 GLU GLU A . n A 1 35 LYS 35 89 89 LYS LYS A . n A 1 36 TRP 36 90 90 TRP TRP A . n A 1 37 LEU 37 91 91 LEU LEU A . n A 1 38 LYS 38 92 92 LYS LYS A . n A 1 39 ASN 39 93 93 ASN ASN A . n A 1 40 VAL 40 94 94 VAL VAL A . n A 1 41 ARG 41 95 95 ARG ARG A . n A 1 42 THR 42 96 96 THR THR A . n A 1 43 ALA 43 97 97 ALA ALA A . n A 1 44 TYR 44 98 98 TYR TYR A . n A 1 45 PHE 45 99 99 PHE PHE A . n A 1 46 VAL 46 100 100 VAL VAL A . n A 1 47 CYS 47 101 101 CYS CYS A . n A 1 48 ASP 48 102 102 ASP ASP A . n A 1 49 HIS 49 103 103 HIS HIS A . n A 1 50 ASP 50 104 104 ASP ASP A . n A 1 51 GLY 51 105 105 GLY GLY A . n A 1 52 SER 52 106 106 SER SER A . n A 1 53 VAL 53 107 107 VAL VAL A . n A 1 54 GLU 54 108 108 GLU GLU A . n A 1 55 LEU 55 109 109 LEU LEU A . n A 1 56 ALA 56 110 110 ALA ALA A . n A 1 57 TYR 57 111 111 TYR TYR A . n A 1 58 LEU 58 112 112 LEU LEU A . n A 1 59 PRO 59 113 113 PRO PRO A . n A 1 60 ASN 60 114 114 ASN ASN A . n A 1 61 VAL 61 115 115 VAL VAL A . n A 1 62 LEU 62 116 116 LEU LEU A . n A 1 63 PRO 63 117 117 PRO PRO A . n A 1 64 LYS 64 118 118 LYS LYS A . n A 1 65 GLU 65 119 119 GLU GLU A . n A 1 66 LEU 66 120 120 LEU LEU A . n A 1 67 VAL 67 121 121 VAL VAL A . n A 1 68 GLU 68 122 122 GLU GLU A . n A 1 69 GLU 69 123 123 GLU GLU A . n A 1 70 PHE 70 124 124 PHE PHE A . n A 1 71 THR 71 125 125 THR THR A . n A 1 72 GLU 72 126 126 GLU GLU A . n A 1 73 LYS 73 127 127 LYS LYS A . n A 1 74 PHE 74 128 128 PHE PHE A . n A 1 75 GLU 75 129 129 GLU GLU A . n A 1 76 SER 76 130 130 SER SER A . n A 1 77 ILE 77 131 131 ILE ILE A . n A 1 78 GLN 78 132 132 GLN GLN A . n A 1 79 THR 79 133 133 THR THR A . n A 1 80 GLY 80 134 134 GLY GLY A . n A 1 81 ARG 81 135 135 ARG ARG A . n A 1 82 LYS 82 136 136 LYS LYS A . n A 1 83 LYS 83 137 137 LYS LYS A . n A 1 84 ASP 84 138 138 ASP ASP A . n A 1 85 THR 85 139 139 THR THR A . n A 1 86 GLY 86 140 140 GLY GLY A . n A 1 87 TYR 87 141 141 TYR TYR A . n A 1 88 SER 88 142 142 SER SER A . n A 1 89 GLY 89 143 143 GLY GLY A . n A 1 90 ILE 90 144 144 ILE ILE A . n A 1 91 LEU 91 145 145 LEU LEU A . n A 1 92 ASP 92 146 146 ASP ASP A . n A 1 93 ASN 93 147 147 ASN ASN A . n A 1 94 SER 94 148 148 SER SER A . n A 1 95 MET 95 149 149 MET MET A . n A 1 96 PRO 96 150 150 PRO PRO A . n A 1 97 PHE 97 151 151 PHE PHE A . n A 1 98 ASN 98 152 152 ASN ASN A . n A 1 99 TYR 99 153 153 TYR TYR A . n A 1 100 VAL 100 154 154 VAL VAL A . n A 1 101 THR 101 155 155 THR THR A . n A 1 102 ALA 102 156 156 ALA ALA A . n A 1 103 ASP 103 157 157 ASP ASP A . n A 1 104 LEU 104 158 158 LEU LEU A . n A 1 105 SER 105 159 159 SER SER A . n A 1 106 GLN 106 160 160 GLN GLN A . n A 1 107 GLU 107 161 161 GLU GLU A . n A 1 108 LEU 108 162 162 LEU LEU A . n A 1 109 GLY 109 163 163 GLY GLY A . n A 1 110 GLN 110 164 164 GLN GLN A . n A 1 111 TYR 111 165 165 TYR TYR A . n A 1 112 LEU 112 166 166 LEU LEU A . n A 1 113 SER 113 167 167 SER SER A . n A 1 114 GLU 114 168 168 GLU GLU A . n A 1 115 ILE 115 169 169 ILE ILE A . n A 1 116 VAL 116 170 170 VAL VAL A . n A 1 117 ASN 117 171 171 ASN ASN A . n A 1 118 PRO 118 172 172 PRO PRO A . n A 1 119 GLN 119 173 173 GLN GLN A . n A 1 120 ILE 120 174 174 ILE ILE A . n A 1 121 ASN 121 175 175 ASN ASN A . n A 1 122 TYR 122 176 176 TYR TYR A . n A 1 123 TYR 123 177 177 TYR TYR A . n A 1 124 ILE 124 178 178 ILE ILE A . n A 1 125 SER 125 179 179 SER SER A . n A 1 126 LYS 126 180 180 LYS LYS A . n A 1 127 LEU 127 181 181 LEU LEU A . n A 1 128 LEU 128 182 182 LEU LEU A . n A 1 129 THR 129 183 183 THR THR A . n A 1 130 CYS 130 184 184 CYS CYS A . n A 1 131 VAL 131 185 185 VAL VAL A . n A 1 132 SER 132 186 186 SER SER A . n A 1 133 SER 133 187 187 SER SER A . n A 1 134 ARG 134 188 188 ARG ARG A . n A 1 135 THR 135 189 189 THR THR A . n A 1 136 ILE 136 190 190 ILE ILE A . n A 1 137 ASN 137 191 191 ASN ASN A . n A 1 138 TYR 138 192 192 TYR TYR A . n A 1 139 LEU 139 193 193 LEU LEU A . n A 1 140 VAL 140 194 194 VAL VAL A . n A 1 141 SER 141 195 195 SER SER A . n A 1 142 LEU 142 196 196 LEU LEU A . n A 1 143 ASN 143 197 197 ASN ASN A . n A 1 144 ASP 144 198 198 ASP ASP A . n A 1 145 SER 145 199 199 SER SER A . n A 1 146 TYR 146 200 200 TYR TYR A . n A 1 147 TYR 147 201 201 TYR TYR A . n A 1 148 ALA 148 202 202 ALA ALA A . n A 1 149 LEU 149 203 203 LEU LEU A . n A 1 150 ASN 150 204 204 ASN ASN A . n A 1 151 ASN 151 205 205 ASN ASN A . n A 1 152 CYS 152 206 206 CYS CYS A . n A 1 153 LEU 153 207 207 LEU LEU A . n A 1 154 TYR 154 208 208 TYR TYR A . n A 1 155 PRO 155 209 209 PRO PRO A . n A 1 156 SER 156 210 210 SER SER A . n A 1 157 THR 157 211 211 THR THR A . n A 1 158 ALA 158 212 212 ALA ALA A . n A 1 159 PHE 159 213 213 PHE PHE A . n A 1 160 ASN 160 214 214 ASN ASN A . n A 1 161 SER 161 215 215 SER SER A . n A 1 162 LEU 162 216 216 LEU LEU A . n A 1 163 LYS 163 217 217 LYS LYS A . n A 1 164 PRO 164 218 218 PRO PRO A . n A 1 165 SER 165 219 219 SER SER A . n A 1 166 ASN 166 220 220 ASN ASN A . n A 1 167 ASP 167 221 221 ASP ASP A . n A 1 168 GLY 168 222 222 GLY GLY A . n A 1 169 HIS 169 223 223 HIS HIS A . n A 1 170 ARG 170 224 224 ARG ARG A . n A 1 171 ILE 171 225 225 ILE ILE A . n A 1 172 ARG 172 226 226 ARG ARG A . n A 1 173 LYS 173 227 227 LYS LYS A . n A 1 174 PRO 174 228 228 PRO PRO A . n A 1 175 HIS 175 229 229 HIS HIS A . n A 1 176 LYS 176 230 230 LYS LYS A . n A 1 177 ASP 177 231 231 ASP ASP A . n A 1 178 ASN 178 232 232 ASN ASN A . n A 1 179 LEU 179 233 233 LEU LEU A . n A 1 180 ASP 180 234 234 ASP ASP A . n A 1 181 ILE 181 235 235 ILE ILE A . n A 1 182 THR 182 236 236 THR THR A . n A 1 183 PRO 183 237 237 PRO PRO A . n A 1 184 SER 184 238 238 SER SER A . n A 1 185 SER 185 239 239 SER SER A . n A 1 186 LEU 186 240 240 LEU LEU A . n A 1 187 PHE 187 241 241 PHE PHE A . n A 1 188 TYR 188 242 242 TYR TYR A . n A 1 189 PHE 189 243 243 PHE PHE A . n A 1 190 GLY 190 244 244 GLY GLY A . n A 1 191 ASN 191 245 245 ASN ASN A . n A 1 192 PHE 192 246 246 PHE PHE A . n A 1 193 GLN 193 247 247 GLN GLN A . n A 1 194 ASN 194 248 248 ASN ASN A . n A 1 195 THR 195 249 249 THR THR A . n A 1 196 GLU 196 250 250 GLU GLU A . n A 1 197 GLY 197 251 251 GLY GLY A . n A 1 198 TYR 198 252 252 TYR TYR A . n A 1 199 LEU 199 253 253 LEU LEU A . n A 1 200 GLU 200 254 254 GLU GLU A . n A 1 201 LEU 201 255 255 LEU LEU A . n A 1 202 THR 202 256 256 THR THR A . n A 1 203 ASP 203 257 257 ASP ASP A . n A 1 204 LYS 204 258 258 LYS LYS A . n A 1 205 ASN 205 259 259 ASN ASN A . n A 1 206 CYS 206 260 260 CYS CYS A . n A 1 207 LYS 207 261 261 LYS LYS A . n A 1 208 VAL 208 262 262 VAL VAL A . n A 1 209 PHE 209 263 263 PHE PHE A . n A 1 210 VAL 210 264 264 VAL VAL A . n A 1 211 GLN 211 265 265 GLN GLN A . n A 1 212 PRO 212 266 266 PRO PRO A . n A 1 213 GLY 213 267 267 GLY GLY A . n A 1 214 ASP 214 268 268 ASP ASP A . n A 1 215 VAL 215 269 269 VAL VAL A . n A 1 216 LEU 216 270 270 LEU LEU A . n A 1 217 PHE 217 271 271 PHE PHE A . n A 1 218 PHE 218 272 272 PHE PHE A . n A 1 219 LYS 219 273 273 LYS LYS A . n A 1 220 GLY 220 274 274 GLY GLY A . n A 1 221 ASN 221 275 275 ASN ASN A . n A 1 222 GLU 222 276 276 GLU GLU A . n A 1 223 TYR 223 277 277 TYR TYR A . n A 1 224 LYS 224 278 278 LYS LYS A . n A 1 225 HIS 225 279 279 HIS HIS A . n A 1 226 VAL 226 280 280 VAL VAL A . n A 1 227 VAL 227 281 281 VAL VAL A . n A 1 228 ALA 228 282 282 ALA ALA A . n A 1 229 ASN 229 283 283 ASN ASN A . n A 1 230 ILE 230 284 284 ILE ILE A . n A 1 231 THR 231 285 285 THR THR A . n A 1 232 SER 232 286 286 SER SER A . n A 1 233 GLY 233 287 287 GLY GLY A . n A 1 234 TRP 234 288 288 TRP TRP A . n A 1 235 ARG 235 289 289 ARG ARG A . n A 1 236 ILE 236 290 290 ILE ILE A . n A 1 237 GLY 237 291 291 GLY GLY A . n A 1 238 LEU 238 292 292 LEU LEU A . n A 1 239 VAL 239 293 293 VAL VAL A . n A 1 240 TYR 240 294 294 TYR TYR A . n A 1 241 PHE 241 295 295 PHE PHE A . n A 1 242 ALA 242 296 296 ALA ALA A . n A 1 243 HIS 243 297 297 HIS HIS A . n A 1 244 LYS 244 298 298 LYS LYS A . n A 1 245 GLY 245 299 299 GLY GLY A . n A 1 246 SER 246 300 300 SER SER A . n A 1 247 LYS 247 301 301 LYS LYS A . n A 1 248 THR 248 302 302 THR THR A . n A 1 249 LYS 249 303 303 LYS LYS A . n A 1 250 PRO 250 304 304 PRO PRO A . n A 1 251 TYR 251 305 305 TYR TYR A . n A 1 252 TYR 252 306 306 TYR TYR A . n A 1 253 GLU 253 307 307 GLU GLU A . n A 1 254 ASP 254 308 308 ASP ASP A . n A 1 255 THR 255 309 309 THR THR A . n A 1 256 GLN 256 310 310 GLN GLN A . n A 1 257 LYS 257 311 311 LYS LYS A . n A 1 258 ASN 258 312 312 ASN ASN A . n A 1 259 SER 259 313 313 SER SER A . n A 1 260 LEU 260 314 314 LEU LEU A . n A 1 261 LYS 261 315 315 LYS LYS A . n A 1 262 ILE 262 316 316 ILE ILE A . n A 1 263 HIS 263 317 317 HIS HIS A . n A 1 264 LYS 264 318 318 LYS LYS A . n A 1 265 GLU 265 319 319 GLU GLU A . n A 1 266 THR 266 320 320 THR THR A . n A 1 267 LYS 267 321 321 LYS LYS A . n B 2 1 DC 1 3 3 DC DC B . n B 2 2 DA 2 4 4 DA DA B . n B 2 3 DT 3 5 5 DT DT B . n B 2 4 DG 4 6 6 DG DG B . n B 2 5 DC 5 7 7 DC DC B . n B 2 6 DG 6 8 8 DG DG B . n B 2 7 DC 7 9 9 DC DC B . n B 2 8 DT 8 10 10 DT DT B . n B 2 9 DG 9 11 11 DG DG B . n B 2 10 DA 10 12 12 DA DA B . n B 2 11 DC 11 13 13 DC DC B . n C 3 1 DT 1 14 14 DT DT C . n C 3 2 DG 2 15 15 DG DG C . n C 3 3 DT 3 16 16 DT DT C . n C 3 4 DC 4 17 17 DC DC C . n C 3 5 DA 5 18 18 DA DA C . n C 3 6 DG 6 19 19 DG DG C . n C 3 7 5CM 7 20 20 5CM 5CM C . n C 3 8 DG 8 21 21 DG DG C . n C 3 9 DC 9 22 22 DC DC C . n C 3 10 DA 10 23 23 DA DA C . n C 3 11 DT 11 24 24 DT DT C . n C 3 12 DG 12 25 25 DG DG C . n C 3 13 DG 13 26 26 DG DG C . n D 1 1 HIS 1 55 ? ? ? D . n D 1 2 MET 2 56 ? ? ? D . n D 1 3 ILE 3 57 57 ILE ILE D . n D 1 4 ASN 4 58 58 ASN ASN D . n D 1 5 LYS 5 59 59 LYS LYS D . n D 1 6 LYS 6 60 60 LYS LYS D . n D 1 7 SER 7 61 61 SER SER D . n D 1 8 LEU 8 62 62 LEU LEU D . n D 1 9 LEU 9 63 63 LEU LEU D . n D 1 10 GLN 10 64 64 GLN GLN D . n D 1 11 ASN 11 65 65 ASN ASN D . n D 1 12 LEU 12 66 66 LEU LEU D . n D 1 13 LEU 13 67 67 LEU LEU D . n D 1 14 SER 14 68 68 SER SER D . n D 1 15 LYS 15 69 69 LYS LYS D . n D 1 16 CYS 16 70 70 CYS CYS D . n D 1 17 LYS 17 71 71 LYS LYS D . n D 1 18 THR 18 72 72 THR THR D . n D 1 19 THR 19 73 73 THR THR D . n D 1 20 PHE 20 74 74 PHE PHE D . n D 1 21 GLN 21 75 75 GLN GLN D . n D 1 22 GLN 22 76 76 GLN GLN D . n D 1 23 SER 23 77 77 SER SER D . n D 1 24 PHE 24 78 78 PHE PHE D . n D 1 25 THR 25 79 79 THR THR D . n D 1 26 ASN 26 80 80 ASN ASN D . n D 1 27 ALA 27 81 81 ALA ALA D . n D 1 28 ASN 28 82 82 ASN ASN D . n D 1 29 ILE 29 83 83 ILE ILE D . n D 1 30 THR 30 84 84 THR THR D . n D 1 31 LEU 31 85 85 LEU LEU D . n D 1 32 LYS 32 86 86 LYS LYS D . n D 1 33 ASP 33 87 87 ASP ASP D . n D 1 34 GLU 34 88 88 GLU GLU D . n D 1 35 LYS 35 89 89 LYS LYS D . n D 1 36 TRP 36 90 90 TRP TRP D . n D 1 37 LEU 37 91 91 LEU LEU D . n D 1 38 LYS 38 92 92 LYS LYS D . n D 1 39 ASN 39 93 93 ASN ASN D . n D 1 40 VAL 40 94 94 VAL VAL D . n D 1 41 ARG 41 95 95 ARG ARG D . n D 1 42 THR 42 96 96 THR THR D . n D 1 43 ALA 43 97 97 ALA ALA D . n D 1 44 TYR 44 98 98 TYR TYR D . n D 1 45 PHE 45 99 99 PHE PHE D . n D 1 46 VAL 46 100 100 VAL VAL D . n D 1 47 CYS 47 101 101 CYS CYS D . n D 1 48 ASP 48 102 102 ASP ASP D . n D 1 49 HIS 49 103 103 HIS HIS D . n D 1 50 ASP 50 104 104 ASP ASP D . n D 1 51 GLY 51 105 105 GLY GLY D . n D 1 52 SER 52 106 106 SER SER D . n D 1 53 VAL 53 107 107 VAL VAL D . n D 1 54 GLU 54 108 108 GLU GLU D . n D 1 55 LEU 55 109 109 LEU LEU D . n D 1 56 ALA 56 110 110 ALA ALA D . n D 1 57 TYR 57 111 111 TYR TYR D . n D 1 58 LEU 58 112 112 LEU LEU D . n D 1 59 PRO 59 113 113 PRO PRO D . n D 1 60 ASN 60 114 114 ASN ASN D . n D 1 61 VAL 61 115 115 VAL VAL D . n D 1 62 LEU 62 116 116 LEU LEU D . n D 1 63 PRO 63 117 117 PRO PRO D . n D 1 64 LYS 64 118 118 LYS LYS D . n D 1 65 GLU 65 119 119 GLU GLU D . n D 1 66 LEU 66 120 120 LEU LEU D . n D 1 67 VAL 67 121 121 VAL VAL D . n D 1 68 GLU 68 122 122 GLU GLU D . n D 1 69 GLU 69 123 123 GLU GLU D . n D 1 70 PHE 70 124 124 PHE PHE D . n D 1 71 THR 71 125 125 THR THR D . n D 1 72 GLU 72 126 126 GLU GLU D . n D 1 73 LYS 73 127 127 LYS LYS D . n D 1 74 PHE 74 128 128 PHE PHE D . n D 1 75 GLU 75 129 129 GLU GLU D . n D 1 76 SER 76 130 130 SER SER D . n D 1 77 ILE 77 131 131 ILE ILE D . n D 1 78 GLN 78 132 132 GLN GLN D . n D 1 79 THR 79 133 133 THR THR D . n D 1 80 GLY 80 134 134 GLY GLY D . n D 1 81 ARG 81 135 135 ARG ARG D . n D 1 82 LYS 82 136 136 LYS LYS D . n D 1 83 LYS 83 137 137 LYS LYS D . n D 1 84 ASP 84 138 138 ASP ASP D . n D 1 85 THR 85 139 139 THR THR D . n D 1 86 GLY 86 140 140 GLY GLY D . n D 1 87 TYR 87 141 141 TYR TYR D . n D 1 88 SER 88 142 142 SER SER D . n D 1 89 GLY 89 143 143 GLY GLY D . n D 1 90 ILE 90 144 144 ILE ILE D . n D 1 91 LEU 91 145 145 LEU LEU D . n D 1 92 ASP 92 146 146 ASP ASP D . n D 1 93 ASN 93 147 147 ASN ASN D . n D 1 94 SER 94 148 148 SER SER D . n D 1 95 MET 95 149 149 MET MET D . n D 1 96 PRO 96 150 150 PRO PRO D . n D 1 97 PHE 97 151 151 PHE PHE D . n D 1 98 ASN 98 152 152 ASN ASN D . n D 1 99 TYR 99 153 153 TYR TYR D . n D 1 100 VAL 100 154 154 VAL VAL D . n D 1 101 THR 101 155 155 THR THR D . n D 1 102 ALA 102 156 156 ALA ALA D . n D 1 103 ASP 103 157 157 ASP ASP D . n D 1 104 LEU 104 158 158 LEU LEU D . n D 1 105 SER 105 159 159 SER SER D . n D 1 106 GLN 106 160 160 GLN GLN D . n D 1 107 GLU 107 161 161 GLU GLU D . n D 1 108 LEU 108 162 162 LEU LEU D . n D 1 109 GLY 109 163 163 GLY GLY D . n D 1 110 GLN 110 164 164 GLN GLN D . n D 1 111 TYR 111 165 165 TYR TYR D . n D 1 112 LEU 112 166 166 LEU LEU D . n D 1 113 SER 113 167 167 SER SER D . n D 1 114 GLU 114 168 168 GLU GLU D . n D 1 115 ILE 115 169 169 ILE ILE D . n D 1 116 VAL 116 170 170 VAL VAL D . n D 1 117 ASN 117 171 171 ASN ASN D . n D 1 118 PRO 118 172 172 PRO PRO D . n D 1 119 GLN 119 173 173 GLN GLN D . n D 1 120 ILE 120 174 174 ILE ILE D . n D 1 121 ASN 121 175 175 ASN ASN D . n D 1 122 TYR 122 176 176 TYR TYR D . n D 1 123 TYR 123 177 177 TYR TYR D . n D 1 124 ILE 124 178 178 ILE ILE D . n D 1 125 SER 125 179 179 SER SER D . n D 1 126 LYS 126 180 180 LYS LYS D . n D 1 127 LEU 127 181 181 LEU LEU D . n D 1 128 LEU 128 182 182 LEU LEU D . n D 1 129 THR 129 183 183 THR THR D . n D 1 130 CYS 130 184 184 CYS CYS D . n D 1 131 VAL 131 185 185 VAL VAL D . n D 1 132 SER 132 186 186 SER SER D . n D 1 133 SER 133 187 187 SER SER D . n D 1 134 ARG 134 188 188 ARG ARG D . n D 1 135 THR 135 189 189 THR THR D . n D 1 136 ILE 136 190 190 ILE ILE D . n D 1 137 ASN 137 191 191 ASN ASN D . n D 1 138 TYR 138 192 192 TYR TYR D . n D 1 139 LEU 139 193 193 LEU LEU D . n D 1 140 VAL 140 194 194 VAL VAL D . n D 1 141 SER 141 195 195 SER SER D . n D 1 142 LEU 142 196 196 LEU LEU D . n D 1 143 ASN 143 197 197 ASN ASN D . n D 1 144 ASP 144 198 198 ASP ASP D . n D 1 145 SER 145 199 199 SER SER D . n D 1 146 TYR 146 200 200 TYR TYR D . n D 1 147 TYR 147 201 201 TYR TYR D . n D 1 148 ALA 148 202 202 ALA ALA D . n D 1 149 LEU 149 203 203 LEU LEU D . n D 1 150 ASN 150 204 204 ASN ASN D . n D 1 151 ASN 151 205 205 ASN ASN D . n D 1 152 CYS 152 206 206 CYS CYS D . n D 1 153 LEU 153 207 207 LEU LEU D . n D 1 154 TYR 154 208 208 TYR TYR D . n D 1 155 PRO 155 209 209 PRO PRO D . n D 1 156 SER 156 210 210 SER SER D . n D 1 157 THR 157 211 211 THR THR D . n D 1 158 ALA 158 212 212 ALA ALA D . n D 1 159 PHE 159 213 213 PHE PHE D . n D 1 160 ASN 160 214 214 ASN ASN D . n D 1 161 SER 161 215 215 SER SER D . n D 1 162 LEU 162 216 216 LEU LEU D . n D 1 163 LYS 163 217 217 LYS LYS D . n D 1 164 PRO 164 218 218 PRO PRO D . n D 1 165 SER 165 219 219 SER SER D . n D 1 166 ASN 166 220 220 ASN ASN D . n D 1 167 ASP 167 221 221 ASP ASP D . n D 1 168 GLY 168 222 222 GLY GLY D . n D 1 169 HIS 169 223 223 HIS HIS D . n D 1 170 ARG 170 224 224 ARG ARG D . n D 1 171 ILE 171 225 225 ILE ILE D . n D 1 172 ARG 172 226 226 ARG ARG D . n D 1 173 LYS 173 227 227 LYS LYS D . n D 1 174 PRO 174 228 228 PRO PRO D . n D 1 175 HIS 175 229 229 HIS HIS D . n D 1 176 LYS 176 230 230 LYS LYS D . n D 1 177 ASP 177 231 231 ASP ASP D . n D 1 178 ASN 178 232 232 ASN ASN D . n D 1 179 LEU 179 233 233 LEU LEU D . n D 1 180 ASP 180 234 234 ASP ASP D . n D 1 181 ILE 181 235 235 ILE ILE D . n D 1 182 THR 182 236 236 THR THR D . n D 1 183 PRO 183 237 237 PRO PRO D . n D 1 184 SER 184 238 238 SER SER D . n D 1 185 SER 185 239 239 SER SER D . n D 1 186 LEU 186 240 240 LEU LEU D . n D 1 187 PHE 187 241 241 PHE PHE D . n D 1 188 TYR 188 242 242 TYR TYR D . n D 1 189 PHE 189 243 243 PHE PHE D . n D 1 190 GLY 190 244 244 GLY GLY D . n D 1 191 ASN 191 245 245 ASN ASN D . n D 1 192 PHE 192 246 246 PHE PHE D . n D 1 193 GLN 193 247 247 GLN GLN D . n D 1 194 ASN 194 248 248 ASN ASN D . n D 1 195 THR 195 249 249 THR THR D . n D 1 196 GLU 196 250 250 GLU GLU D . n D 1 197 GLY 197 251 251 GLY GLY D . n D 1 198 TYR 198 252 252 TYR TYR D . n D 1 199 LEU 199 253 253 LEU LEU D . n D 1 200 GLU 200 254 254 GLU GLU D . n D 1 201 LEU 201 255 255 LEU LEU D . n D 1 202 THR 202 256 256 THR THR D . n D 1 203 ASP 203 257 257 ASP ASP D . n D 1 204 LYS 204 258 258 LYS LYS D . n D 1 205 ASN 205 259 259 ASN ASN D . n D 1 206 CYS 206 260 260 CYS CYS D . n D 1 207 LYS 207 261 261 LYS LYS D . n D 1 208 VAL 208 262 262 VAL VAL D . n D 1 209 PHE 209 263 263 PHE PHE D . n D 1 210 VAL 210 264 264 VAL VAL D . n D 1 211 GLN 211 265 265 GLN GLN D . n D 1 212 PRO 212 266 266 PRO PRO D . n D 1 213 GLY 213 267 267 GLY GLY D . n D 1 214 ASP 214 268 268 ASP ASP D . n D 1 215 VAL 215 269 269 VAL VAL D . n D 1 216 LEU 216 270 270 LEU LEU D . n D 1 217 PHE 217 271 271 PHE PHE D . n D 1 218 PHE 218 272 272 PHE PHE D . n D 1 219 LYS 219 273 273 LYS LYS D . n D 1 220 GLY 220 274 274 GLY GLY D . n D 1 221 ASN 221 275 275 ASN ASN D . n D 1 222 GLU 222 276 276 GLU GLU D . n D 1 223 TYR 223 277 277 TYR TYR D . n D 1 224 LYS 224 278 278 LYS LYS D . n D 1 225 HIS 225 279 279 HIS HIS D . n D 1 226 VAL 226 280 280 VAL VAL D . n D 1 227 VAL 227 281 281 VAL VAL D . n D 1 228 ALA 228 282 282 ALA ALA D . n D 1 229 ASN 229 283 283 ASN ASN D . n D 1 230 ILE 230 284 284 ILE ILE D . n D 1 231 THR 231 285 285 THR THR D . n D 1 232 SER 232 286 286 SER SER D . n D 1 233 GLY 233 287 287 GLY GLY D . n D 1 234 TRP 234 288 288 TRP TRP D . n D 1 235 ARG 235 289 289 ARG ARG D . n D 1 236 ILE 236 290 290 ILE ILE D . n D 1 237 GLY 237 291 291 GLY GLY D . n D 1 238 LEU 238 292 292 LEU LEU D . n D 1 239 VAL 239 293 293 VAL VAL D . n D 1 240 TYR 240 294 294 TYR TYR D . n D 1 241 PHE 241 295 295 PHE PHE D . n D 1 242 ALA 242 296 296 ALA ALA D . n D 1 243 HIS 243 297 297 HIS HIS D . n D 1 244 LYS 244 298 298 LYS LYS D . n D 1 245 GLY 245 299 299 GLY GLY D . n D 1 246 SER 246 300 300 SER SER D . n D 1 247 LYS 247 301 301 LYS LYS D . n D 1 248 THR 248 302 302 THR THR D . n D 1 249 LYS 249 303 303 LYS LYS D . n D 1 250 PRO 250 304 304 PRO PRO D . n D 1 251 TYR 251 305 305 TYR TYR D . n D 1 252 TYR 252 306 306 TYR TYR D . n D 1 253 GLU 253 307 307 GLU GLU D . n D 1 254 ASP 254 308 308 ASP ASP D . n D 1 255 THR 255 309 309 THR THR D . n D 1 256 GLN 256 310 310 GLN GLN D . n D 1 257 LYS 257 311 311 LYS LYS D . n D 1 258 ASN 258 312 312 ASN ASN D . n D 1 259 SER 259 313 313 SER SER D . n D 1 260 LEU 260 314 314 LEU LEU D . n D 1 261 LYS 261 315 315 LYS LYS D . n D 1 262 ILE 262 316 316 ILE ILE D . n D 1 263 HIS 263 317 317 HIS HIS D . n D 1 264 LYS 264 318 318 LYS LYS D . n D 1 265 GLU 265 319 319 GLU GLU D . n D 1 266 THR 266 320 320 THR THR D . n D 1 267 LYS 267 321 ? ? ? D . n E 2 1 DC 1 3 3 DC DC E . n E 2 2 DA 2 4 4 DA DA E . n E 2 3 DT 3 5 5 DT DT E . n E 2 4 DG 4 6 6 DG DG E . n E 2 5 DC 5 7 7 DC DC E . n E 2 6 DG 6 8 8 DG DG E . n E 2 7 DC 7 9 9 DC DC E . n E 2 8 DT 8 10 10 DT DT E . n E 2 9 DG 9 11 11 DG DG E . n E 2 10 DA 10 12 12 DA DA E . n E 2 11 DC 11 13 13 DC DC E . n F 3 1 DT 1 14 14 DT DT F . n F 3 2 DG 2 15 15 DG DG F . n F 3 3 DT 3 16 16 DT DT F . n F 3 4 DC 4 17 17 DC DC F . n F 3 5 DA 5 18 18 DA DA F . n F 3 6 DG 6 19 19 DG DG F . n F 3 7 5CM 7 20 20 5CM 5CM F . n F 3 8 DG 8 21 21 DG DG F . n F 3 9 DC 9 22 22 DC DC F . n F 3 10 DA 10 23 23 DA DA F . n F 3 11 DT 11 24 24 DT DT F . n F 3 12 DG 12 25 25 DG DG F . n F 3 13 DG 13 26 26 DG DG F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 SO4 1 401 1 SO4 SO4 A . H 5 AKG 1 402 1 AKG AKG A . I 6 MN 1 403 401 MN MN A . J 4 SO4 1 401 2 SO4 SO4 D . K 4 SO4 1 402 3 SO4 SO4 D . L 7 EDO 1 403 3 EDO EDO D . M 5 AKG 1 404 2 AKG AKG D . N 6 MN 1 405 402 MN MN D . O 7 EDO 1 101 2 EDO EDO F . P 8 HOH 1 501 33 HOH HOH A . P 8 HOH 2 502 1 HOH HOH A . P 8 HOH 3 503 18 HOH HOH A . P 8 HOH 4 504 9 HOH HOH A . P 8 HOH 5 505 30 HOH HOH A . P 8 HOH 6 506 16 HOH HOH A . P 8 HOH 7 507 11 HOH HOH A . P 8 HOH 8 508 32 HOH HOH A . P 8 HOH 9 509 13 HOH HOH A . P 8 HOH 10 510 5 HOH HOH A . Q 8 HOH 1 101 17 HOH HOH C . R 8 HOH 1 501 34 HOH HOH D . R 8 HOH 2 502 10 HOH HOH D . R 8 HOH 3 503 4 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I,P,Q 2 1 D,E,F,J,K,L,M,N,O,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 108.6 ? 2 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 96.0 ? 3 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 94.4 ? 4 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O2 ? H AKG . ? A AKG 402 ? 1_555 97.2 ? 5 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O2 ? H AKG . ? A AKG 402 ? 1_555 95.0 ? 6 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O2 ? H AKG . ? A AKG 402 ? 1_555 160.5 ? 7 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O5 ? H AKG . ? A AKG 402 ? 1_555 125.3 ? 8 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O5 ? H AKG . ? A AKG 402 ? 1_555 126.2 ? 9 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O5 ? H AKG . ? A AKG 402 ? 1_555 81.5 ? 10 O2 ? H AKG . ? A AKG 402 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O5 ? H AKG . ? A AKG 402 ? 1_555 79.2 ? 11 NE2 ? A HIS 175 ? A HIS 229 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O ? P HOH . ? A HOH 501 ? 1_555 160.7 ? 12 OD2 ? A ASP 177 ? A ASP 231 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O ? P HOH . ? A HOH 501 ? 1_555 57.1 ? 13 NE2 ? A HIS 225 ? A HIS 279 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O ? P HOH . ? A HOH 501 ? 1_555 74.1 ? 14 O2 ? H AKG . ? A AKG 402 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O ? P HOH . ? A HOH 501 ? 1_555 96.9 ? 15 O5 ? H AKG . ? A AKG 402 ? 1_555 MN ? I MN . ? A MN 403 ? 1_555 O ? P HOH . ? A HOH 501 ? 1_555 70.4 ? 16 NE2 ? D HIS 175 ? D HIS 229 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 OD2 ? D ASP 177 ? D ASP 231 ? 1_555 107.1 ? 17 NE2 ? D HIS 175 ? D HIS 229 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 NE2 ? D HIS 225 ? D HIS 279 ? 1_555 96.0 ? 18 OD2 ? D ASP 177 ? D ASP 231 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 NE2 ? D HIS 225 ? D HIS 279 ? 1_555 86.6 ? 19 NE2 ? D HIS 175 ? D HIS 229 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O2 ? M AKG . ? D AKG 404 ? 1_555 81.1 ? 20 OD2 ? D ASP 177 ? D ASP 231 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O2 ? M AKG . ? D AKG 404 ? 1_555 104.5 ? 21 NE2 ? D HIS 225 ? D HIS 279 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O2 ? M AKG . ? D AKG 404 ? 1_555 168.9 ? 22 NE2 ? D HIS 175 ? D HIS 229 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O5 ? M AKG . ? D AKG 404 ? 1_555 111.3 ? 23 OD2 ? D ASP 177 ? D ASP 231 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O5 ? M AKG . ? D AKG 404 ? 1_555 141.6 ? 24 NE2 ? D HIS 225 ? D HIS 279 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O5 ? M AKG . ? D AKG 404 ? 1_555 89.4 ? 25 O2 ? M AKG . ? D AKG 404 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O5 ? M AKG . ? D AKG 404 ? 1_555 81.8 ? 26 NE2 ? D HIS 175 ? D HIS 229 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O ? R HOH . ? D HOH 501 ? 1_555 166.7 ? 27 OD2 ? D ASP 177 ? D ASP 231 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O ? R HOH . ? D HOH 501 ? 1_555 61.4 ? 28 NE2 ? D HIS 225 ? D HIS 279 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O ? R HOH . ? D HOH 501 ? 1_555 90.1 ? 29 O2 ? M AKG . ? D AKG 404 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O ? R HOH . ? D HOH 501 ? 1_555 95.1 ? 30 O5 ? M AKG . ? D AKG 404 ? 1_555 MN ? N MN . ? D MN 405 ? 1_555 O ? R HOH . ? D HOH 501 ? 1_555 80.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-09 2 'Structure model' 1 1 2015-09-16 3 'Structure model' 1 2 2015-12-23 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' struct_conn 10 6 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' 7 6 'Structure model' '_struct_conn.conn_type_id' 8 6 'Structure model' '_struct_conn.id' 9 6 'Structure model' '_struct_conn.pdbx_dist_value' 10 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 6 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 231 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 501 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 19 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 19 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 19 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.24 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 1.94 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 136 ? ? -90.69 -61.06 2 1 PRO A 150 ? ? -88.83 44.56 3 1 ILE A 169 ? ? -100.48 -60.28 4 1 CYS A 184 ? ? -94.37 -65.27 5 1 GLU A 276 ? ? -101.16 -61.07 6 1 THR A 302 ? ? -92.91 -65.03 7 1 PRO D 150 ? ? -87.89 46.62 8 1 GLU D 276 ? ? -108.61 -64.00 9 1 THR D 302 ? ? -97.27 -62.78 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 55 ? CG ? A HIS 1 CG 2 1 Y 1 A HIS 55 ? ND1 ? A HIS 1 ND1 3 1 Y 1 A HIS 55 ? CD2 ? A HIS 1 CD2 4 1 Y 1 A HIS 55 ? CE1 ? A HIS 1 CE1 5 1 Y 1 A HIS 55 ? NE2 ? A HIS 1 NE2 6 1 Y 1 A ILE 57 ? CG1 ? A ILE 3 CG1 7 1 Y 1 A ILE 57 ? CG2 ? A ILE 3 CG2 8 1 Y 1 A ILE 57 ? CD1 ? A ILE 3 CD1 9 1 Y 1 A LYS 60 ? CG ? A LYS 6 CG 10 1 Y 1 A LYS 60 ? CD ? A LYS 6 CD 11 1 Y 1 A LYS 60 ? CE ? A LYS 6 CE 12 1 Y 1 A LYS 60 ? NZ ? A LYS 6 NZ 13 1 Y 1 A GLN 64 ? CD ? A GLN 10 CD 14 1 Y 1 A GLN 64 ? OE1 ? A GLN 10 OE1 15 1 Y 1 A GLN 64 ? NE2 ? A GLN 10 NE2 16 1 Y 1 A LYS 69 ? CE ? A LYS 15 CE 17 1 Y 1 A LYS 69 ? NZ ? A LYS 15 NZ 18 1 Y 1 A LYS 71 ? CD ? A LYS 17 CD 19 1 Y 1 A LYS 71 ? CE ? A LYS 17 CE 20 1 Y 1 A LYS 71 ? NZ ? A LYS 17 NZ 21 1 Y 1 A LYS 89 ? CD ? A LYS 35 CD 22 1 Y 1 A LYS 89 ? CE ? A LYS 35 CE 23 1 Y 1 A LYS 89 ? NZ ? A LYS 35 NZ 24 1 Y 1 A LYS 92 ? CD ? A LYS 38 CD 25 1 Y 1 A LYS 92 ? CE ? A LYS 38 CE 26 1 Y 1 A LYS 92 ? NZ ? A LYS 38 NZ 27 1 Y 1 A LYS 118 ? NZ ? A LYS 64 NZ 28 1 Y 1 A GLU 119 ? CD ? A GLU 65 CD 29 1 Y 1 A GLU 119 ? OE1 ? A GLU 65 OE1 30 1 Y 1 A GLU 119 ? OE2 ? A GLU 65 OE2 31 1 Y 1 A LYS 127 ? NZ ? A LYS 73 NZ 32 1 Y 1 A LYS 136 ? CE ? A LYS 82 CE 33 1 Y 1 A LYS 136 ? NZ ? A LYS 82 NZ 34 1 Y 1 A LYS 137 ? NZ ? A LYS 83 NZ 35 1 Y 1 A LYS 227 ? NZ ? A LYS 173 NZ 36 1 Y 1 A LYS 311 ? CE ? A LYS 257 CE 37 1 Y 1 A LYS 311 ? NZ ? A LYS 257 NZ 38 1 Y 1 A LYS 315 ? CE ? A LYS 261 CE 39 1 Y 1 A LYS 315 ? NZ ? A LYS 261 NZ 40 1 Y 1 A THR 320 ? OG1 ? A THR 266 OG1 41 1 Y 1 A THR 320 ? CG2 ? A THR 266 CG2 42 1 Y 1 A LYS 321 ? CG ? A LYS 267 CG 43 1 Y 1 A LYS 321 ? CD ? A LYS 267 CD 44 1 Y 1 A LYS 321 ? CE ? A LYS 267 CE 45 1 Y 1 A LYS 321 ? NZ ? A LYS 267 NZ 46 1 Y 1 C DT 14 ? "O5'" ? C DT 1 "O5'" 47 1 Y 1 C DT 14 ? "C5'" ? C DT 1 "C5'" 48 1 Y 1 C DT 14 ? N1 ? C DT 1 N1 49 1 Y 1 C DT 14 ? C2 ? C DT 1 C2 50 1 Y 1 C DT 14 ? O2 ? C DT 1 O2 51 1 Y 1 C DT 14 ? N3 ? C DT 1 N3 52 1 Y 1 C DT 14 ? C4 ? C DT 1 C4 53 1 Y 1 C DT 14 ? O4 ? C DT 1 O4 54 1 Y 1 C DT 14 ? C5 ? C DT 1 C5 55 1 Y 1 C DT 14 ? C7 ? C DT 1 C7 56 1 Y 1 C DT 14 ? C6 ? C DT 1 C6 57 1 Y 1 C DG 26 ? "C4'" ? C DG 13 "C4'" 58 1 Y 1 C DG 26 ? "O4'" ? C DG 13 "O4'" 59 1 Y 1 C DG 26 ? "C3'" ? C DG 13 "C3'" 60 1 Y 1 C DG 26 ? "O3'" ? C DG 13 "O3'" 61 1 Y 1 C DG 26 ? "C2'" ? C DG 13 "C2'" 62 1 Y 1 C DG 26 ? "C1'" ? C DG 13 "C1'" 63 1 Y 1 C DG 26 ? N9 ? C DG 13 N9 64 1 Y 1 C DG 26 ? C8 ? C DG 13 C8 65 1 Y 1 C DG 26 ? N7 ? C DG 13 N7 66 1 Y 1 C DG 26 ? C5 ? C DG 13 C5 67 1 Y 1 C DG 26 ? C6 ? C DG 13 C6 68 1 Y 1 C DG 26 ? O6 ? C DG 13 O6 69 1 Y 1 C DG 26 ? N1 ? C DG 13 N1 70 1 Y 1 C DG 26 ? C2 ? C DG 13 C2 71 1 Y 1 C DG 26 ? N2 ? C DG 13 N2 72 1 Y 1 C DG 26 ? N3 ? C DG 13 N3 73 1 Y 1 C DG 26 ? C4 ? C DG 13 C4 74 1 Y 1 D LYS 59 ? CG ? D LYS 5 CG 75 1 Y 1 D LYS 59 ? CD ? D LYS 5 CD 76 1 Y 1 D LYS 59 ? CE ? D LYS 5 CE 77 1 Y 1 D LYS 59 ? NZ ? D LYS 5 NZ 78 1 Y 1 D LYS 60 ? CG ? D LYS 6 CG 79 1 Y 1 D LYS 60 ? CD ? D LYS 6 CD 80 1 Y 1 D LYS 60 ? CE ? D LYS 6 CE 81 1 Y 1 D LYS 60 ? NZ ? D LYS 6 NZ 82 1 Y 1 D GLN 64 ? CG ? D GLN 10 CG 83 1 Y 1 D GLN 64 ? CD ? D GLN 10 CD 84 1 Y 1 D GLN 64 ? OE1 ? D GLN 10 OE1 85 1 Y 1 D GLN 64 ? NE2 ? D GLN 10 NE2 86 1 Y 1 D LYS 69 ? NZ ? D LYS 15 NZ 87 1 Y 1 D LYS 71 ? CG ? D LYS 17 CG 88 1 Y 1 D LYS 71 ? CD ? D LYS 17 CD 89 1 Y 1 D LYS 71 ? CE ? D LYS 17 CE 90 1 Y 1 D LYS 71 ? NZ ? D LYS 17 NZ 91 1 Y 1 D LYS 89 ? CG ? D LYS 35 CG 92 1 Y 1 D LYS 89 ? CD ? D LYS 35 CD 93 1 Y 1 D LYS 89 ? CE ? D LYS 35 CE 94 1 Y 1 D LYS 89 ? NZ ? D LYS 35 NZ 95 1 Y 1 D LYS 92 ? CG ? D LYS 38 CG 96 1 Y 1 D LYS 92 ? CD ? D LYS 38 CD 97 1 Y 1 D LYS 92 ? CE ? D LYS 38 CE 98 1 Y 1 D LYS 92 ? NZ ? D LYS 38 NZ 99 1 Y 1 D LYS 118 ? CG ? D LYS 64 CG 100 1 Y 1 D LYS 118 ? CD ? D LYS 64 CD 101 1 Y 1 D LYS 118 ? CE ? D LYS 64 CE 102 1 Y 1 D LYS 118 ? NZ ? D LYS 64 NZ 103 1 Y 1 D GLU 119 ? CG ? D GLU 65 CG 104 1 Y 1 D GLU 119 ? CD ? D GLU 65 CD 105 1 Y 1 D GLU 119 ? OE1 ? D GLU 65 OE1 106 1 Y 1 D GLU 119 ? OE2 ? D GLU 65 OE2 107 1 Y 1 D LYS 127 ? CE ? D LYS 73 CE 108 1 Y 1 D LYS 127 ? NZ ? D LYS 73 NZ 109 1 Y 1 D LYS 136 ? CG ? D LYS 82 CG 110 1 Y 1 D LYS 136 ? CD ? D LYS 82 CD 111 1 Y 1 D LYS 136 ? CE ? D LYS 82 CE 112 1 Y 1 D LYS 136 ? NZ ? D LYS 82 NZ 113 1 Y 1 D LYS 227 ? CE ? D LYS 173 CE 114 1 Y 1 D LYS 227 ? NZ ? D LYS 173 NZ 115 1 Y 1 D LYS 261 ? CG ? D LYS 207 CG 116 1 Y 1 D LYS 261 ? CD ? D LYS 207 CD 117 1 Y 1 D LYS 261 ? CE ? D LYS 207 CE 118 1 Y 1 D LYS 261 ? NZ ? D LYS 207 NZ 119 1 Y 1 D LYS 278 ? CD ? D LYS 224 CD 120 1 Y 1 D LYS 278 ? CE ? D LYS 224 CE 121 1 Y 1 D LYS 278 ? NZ ? D LYS 224 NZ 122 1 Y 1 D LYS 311 ? CE ? D LYS 257 CE 123 1 Y 1 D LYS 311 ? NZ ? D LYS 257 NZ 124 1 Y 1 D LYS 315 ? CD ? D LYS 261 CD 125 1 Y 1 D LYS 315 ? CE ? D LYS 261 CE 126 1 Y 1 D LYS 315 ? NZ ? D LYS 261 NZ 127 1 Y 1 D LYS 318 ? CG ? D LYS 264 CG 128 1 Y 1 D LYS 318 ? CD ? D LYS 264 CD 129 1 Y 1 D LYS 318 ? CE ? D LYS 264 CE 130 1 Y 1 D LYS 318 ? NZ ? D LYS 264 NZ 131 1 Y 1 D THR 320 ? OG1 ? D THR 266 OG1 132 1 Y 1 D THR 320 ? CG2 ? D THR 266 CG2 133 1 Y 1 F DT 14 ? "O5'" ? F DT 1 "O5'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D HIS 55 ? D HIS 1 2 1 Y 1 D MET 56 ? D MET 2 3 1 Y 1 D LYS 321 ? D LYS 267 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 AKG C1 C N N 38 AKG O1 O N N 39 AKG O2 O N N 40 AKG C2 C N N 41 AKG O5 O N N 42 AKG C3 C N N 43 AKG C4 C N N 44 AKG C5 C N N 45 AKG O3 O N N 46 AKG O4 O N N 47 AKG HO2 H N N 48 AKG H31 H N N 49 AKG H32 H N N 50 AKG H41 H N N 51 AKG H42 H N N 52 AKG HO4 H N N 53 ALA N N N N 54 ALA CA C N S 55 ALA C C N N 56 ALA O O N N 57 ALA CB C N N 58 ALA OXT O N N 59 ALA H H N N 60 ALA H2 H N N 61 ALA HA H N N 62 ALA HB1 H N N 63 ALA HB2 H N N 64 ALA HB3 H N N 65 ALA HXT H N N 66 ARG N N N N 67 ARG CA C N S 68 ARG C C N N 69 ARG O O N N 70 ARG CB C N N 71 ARG CG C N N 72 ARG CD C N N 73 ARG NE N N N 74 ARG CZ C N N 75 ARG NH1 N N N 76 ARG NH2 N N N 77 ARG OXT O N N 78 ARG H H N N 79 ARG H2 H N N 80 ARG HA H N N 81 ARG HB2 H N N 82 ARG HB3 H N N 83 ARG HG2 H N N 84 ARG HG3 H N N 85 ARG HD2 H N N 86 ARG HD3 H N N 87 ARG HE H N N 88 ARG HH11 H N N 89 ARG HH12 H N N 90 ARG HH21 H N N 91 ARG HH22 H N N 92 ARG HXT H N N 93 ASN N N N N 94 ASN CA C N S 95 ASN C C N N 96 ASN O O N N 97 ASN CB C N N 98 ASN CG C N N 99 ASN OD1 O N N 100 ASN ND2 N N N 101 ASN OXT O N N 102 ASN H H N N 103 ASN H2 H N N 104 ASN HA H N N 105 ASN HB2 H N N 106 ASN HB3 H N N 107 ASN HD21 H N N 108 ASN HD22 H N N 109 ASN HXT H N N 110 ASP N N N N 111 ASP CA C N S 112 ASP C C N N 113 ASP O O N N 114 ASP CB C N N 115 ASP CG C N N 116 ASP OD1 O N N 117 ASP OD2 O N N 118 ASP OXT O N N 119 ASP H H N N 120 ASP H2 H N N 121 ASP HA H N N 122 ASP HB2 H N N 123 ASP HB3 H N N 124 ASP HD2 H N N 125 ASP HXT H N N 126 CYS N N N N 127 CYS CA C N R 128 CYS C C N N 129 CYS O O N N 130 CYS CB C N N 131 CYS SG S N N 132 CYS OXT O N N 133 CYS H H N N 134 CYS H2 H N N 135 CYS HA H N N 136 CYS HB2 H N N 137 CYS HB3 H N N 138 CYS HG H N N 139 CYS HXT H N N 140 DA OP3 O N N 141 DA P P N N 142 DA OP1 O N N 143 DA OP2 O N N 144 DA "O5'" O N N 145 DA "C5'" C N N 146 DA "C4'" C N R 147 DA "O4'" O N N 148 DA "C3'" C N S 149 DA "O3'" O N N 150 DA "C2'" C N N 151 DA "C1'" C N R 152 DA N9 N Y N 153 DA C8 C Y N 154 DA N7 N Y N 155 DA C5 C Y N 156 DA C6 C Y N 157 DA N6 N N N 158 DA N1 N Y N 159 DA C2 C Y N 160 DA N3 N Y N 161 DA C4 C Y N 162 DA HOP3 H N N 163 DA HOP2 H N N 164 DA "H5'" H N N 165 DA "H5''" H N N 166 DA "H4'" H N N 167 DA "H3'" H N N 168 DA "HO3'" H N N 169 DA "H2'" H N N 170 DA "H2''" H N N 171 DA "H1'" H N N 172 DA H8 H N N 173 DA H61 H N N 174 DA H62 H N N 175 DA H2 H N N 176 DC OP3 O N N 177 DC P P N N 178 DC OP1 O N N 179 DC OP2 O N N 180 DC "O5'" O N N 181 DC "C5'" C N N 182 DC "C4'" C N R 183 DC "O4'" O N N 184 DC "C3'" C N S 185 DC "O3'" O N N 186 DC "C2'" C N N 187 DC "C1'" C N R 188 DC N1 N N N 189 DC C2 C N N 190 DC O2 O N N 191 DC N3 N N N 192 DC C4 C N N 193 DC N4 N N N 194 DC C5 C N N 195 DC C6 C N N 196 DC HOP3 H N N 197 DC HOP2 H N N 198 DC "H5'" H N N 199 DC "H5''" H N N 200 DC "H4'" H N N 201 DC "H3'" H N N 202 DC "HO3'" H N N 203 DC "H2'" H N N 204 DC "H2''" H N N 205 DC "H1'" H N N 206 DC H41 H N N 207 DC H42 H N N 208 DC H5 H N N 209 DC H6 H N N 210 DG OP3 O N N 211 DG P P N N 212 DG OP1 O N N 213 DG OP2 O N N 214 DG "O5'" O N N 215 DG "C5'" C N N 216 DG "C4'" C N R 217 DG "O4'" O N N 218 DG "C3'" C N S 219 DG "O3'" O N N 220 DG "C2'" C N N 221 DG "C1'" C N R 222 DG N9 N Y N 223 DG C8 C Y N 224 DG N7 N Y N 225 DG C5 C Y N 226 DG C6 C N N 227 DG O6 O N N 228 DG N1 N N N 229 DG C2 C N N 230 DG N2 N N N 231 DG N3 N N N 232 DG C4 C Y N 233 DG HOP3 H N N 234 DG HOP2 H N N 235 DG "H5'" H N N 236 DG "H5''" H N N 237 DG "H4'" H N N 238 DG "H3'" H N N 239 DG "HO3'" H N N 240 DG "H2'" H N N 241 DG "H2''" H N N 242 DG "H1'" H N N 243 DG H8 H N N 244 DG H1 H N N 245 DG H21 H N N 246 DG H22 H N N 247 DT OP3 O N N 248 DT P P N N 249 DT OP1 O N N 250 DT OP2 O N N 251 DT "O5'" O N N 252 DT "C5'" C N N 253 DT "C4'" C N R 254 DT "O4'" O N N 255 DT "C3'" C N S 256 DT "O3'" O N N 257 DT "C2'" C N N 258 DT "C1'" C N R 259 DT N1 N N N 260 DT C2 C N N 261 DT O2 O N N 262 DT N3 N N N 263 DT C4 C N N 264 DT O4 O N N 265 DT C5 C N N 266 DT C7 C N N 267 DT C6 C N N 268 DT HOP3 H N N 269 DT HOP2 H N N 270 DT "H5'" H N N 271 DT "H5''" H N N 272 DT "H4'" H N N 273 DT "H3'" H N N 274 DT "HO3'" H N N 275 DT "H2'" H N N 276 DT "H2''" H N N 277 DT "H1'" H N N 278 DT H3 H N N 279 DT H71 H N N 280 DT H72 H N N 281 DT H73 H N N 282 DT H6 H N N 283 EDO C1 C N N 284 EDO O1 O N N 285 EDO C2 C N N 286 EDO O2 O N N 287 EDO H11 H N N 288 EDO H12 H N N 289 EDO HO1 H N N 290 EDO H21 H N N 291 EDO H22 H N N 292 EDO HO2 H N N 293 GLN N N N N 294 GLN CA C N S 295 GLN C C N N 296 GLN O O N N 297 GLN CB C N N 298 GLN CG C N N 299 GLN CD C N N 300 GLN OE1 O N N 301 GLN NE2 N N N 302 GLN OXT O N N 303 GLN H H N N 304 GLN H2 H N N 305 GLN HA H N N 306 GLN HB2 H N N 307 GLN HB3 H N N 308 GLN HG2 H N N 309 GLN HG3 H N N 310 GLN HE21 H N N 311 GLN HE22 H N N 312 GLN HXT H N N 313 GLU N N N N 314 GLU CA C N S 315 GLU C C N N 316 GLU O O N N 317 GLU CB C N N 318 GLU CG C N N 319 GLU CD C N N 320 GLU OE1 O N N 321 GLU OE2 O N N 322 GLU OXT O N N 323 GLU H H N N 324 GLU H2 H N N 325 GLU HA H N N 326 GLU HB2 H N N 327 GLU HB3 H N N 328 GLU HG2 H N N 329 GLU HG3 H N N 330 GLU HE2 H N N 331 GLU HXT H N N 332 GLY N N N N 333 GLY CA C N N 334 GLY C C N N 335 GLY O O N N 336 GLY OXT O N N 337 GLY H H N N 338 GLY H2 H N N 339 GLY HA2 H N N 340 GLY HA3 H N N 341 GLY HXT H N N 342 HIS N N N N 343 HIS CA C N S 344 HIS C C N N 345 HIS O O N N 346 HIS CB C N N 347 HIS CG C Y N 348 HIS ND1 N Y N 349 HIS CD2 C Y N 350 HIS CE1 C Y N 351 HIS NE2 N Y N 352 HIS OXT O N N 353 HIS H H N N 354 HIS H2 H N N 355 HIS HA H N N 356 HIS HB2 H N N 357 HIS HB3 H N N 358 HIS HD1 H N N 359 HIS HD2 H N N 360 HIS HE1 H N N 361 HIS HE2 H N N 362 HIS HXT H N N 363 HOH O O N N 364 HOH H1 H N N 365 HOH H2 H N N 366 ILE N N N N 367 ILE CA C N S 368 ILE C C N N 369 ILE O O N N 370 ILE CB C N S 371 ILE CG1 C N N 372 ILE CG2 C N N 373 ILE CD1 C N N 374 ILE OXT O N N 375 ILE H H N N 376 ILE H2 H N N 377 ILE HA H N N 378 ILE HB H N N 379 ILE HG12 H N N 380 ILE HG13 H N N 381 ILE HG21 H N N 382 ILE HG22 H N N 383 ILE HG23 H N N 384 ILE HD11 H N N 385 ILE HD12 H N N 386 ILE HD13 H N N 387 ILE HXT H N N 388 LEU N N N N 389 LEU CA C N S 390 LEU C C N N 391 LEU O O N N 392 LEU CB C N N 393 LEU CG C N N 394 LEU CD1 C N N 395 LEU CD2 C N N 396 LEU OXT O N N 397 LEU H H N N 398 LEU H2 H N N 399 LEU HA H N N 400 LEU HB2 H N N 401 LEU HB3 H N N 402 LEU HG H N N 403 LEU HD11 H N N 404 LEU HD12 H N N 405 LEU HD13 H N N 406 LEU HD21 H N N 407 LEU HD22 H N N 408 LEU HD23 H N N 409 LEU HXT H N N 410 LYS N N N N 411 LYS CA C N S 412 LYS C C N N 413 LYS O O N N 414 LYS CB C N N 415 LYS CG C N N 416 LYS CD C N N 417 LYS CE C N N 418 LYS NZ N N N 419 LYS OXT O N N 420 LYS H H N N 421 LYS H2 H N N 422 LYS HA H N N 423 LYS HB2 H N N 424 LYS HB3 H N N 425 LYS HG2 H N N 426 LYS HG3 H N N 427 LYS HD2 H N N 428 LYS HD3 H N N 429 LYS HE2 H N N 430 LYS HE3 H N N 431 LYS HZ1 H N N 432 LYS HZ2 H N N 433 LYS HZ3 H N N 434 LYS HXT H N N 435 MET N N N N 436 MET CA C N S 437 MET C C N N 438 MET O O N N 439 MET CB C N N 440 MET CG C N N 441 MET SD S N N 442 MET CE C N N 443 MET OXT O N N 444 MET H H N N 445 MET H2 H N N 446 MET HA H N N 447 MET HB2 H N N 448 MET HB3 H N N 449 MET HG2 H N N 450 MET HG3 H N N 451 MET HE1 H N N 452 MET HE2 H N N 453 MET HE3 H N N 454 MET HXT H N N 455 MN MN MN N N 456 PHE N N N N 457 PHE CA C N S 458 PHE C C N N 459 PHE O O N N 460 PHE CB C N N 461 PHE CG C Y N 462 PHE CD1 C Y N 463 PHE CD2 C Y N 464 PHE CE1 C Y N 465 PHE CE2 C Y N 466 PHE CZ C Y N 467 PHE OXT O N N 468 PHE H H N N 469 PHE H2 H N N 470 PHE HA H N N 471 PHE HB2 H N N 472 PHE HB3 H N N 473 PHE HD1 H N N 474 PHE HD2 H N N 475 PHE HE1 H N N 476 PHE HE2 H N N 477 PHE HZ H N N 478 PHE HXT H N N 479 PRO N N N N 480 PRO CA C N S 481 PRO C C N N 482 PRO O O N N 483 PRO CB C N N 484 PRO CG C N N 485 PRO CD C N N 486 PRO OXT O N N 487 PRO H H N N 488 PRO HA H N N 489 PRO HB2 H N N 490 PRO HB3 H N N 491 PRO HG2 H N N 492 PRO HG3 H N N 493 PRO HD2 H N N 494 PRO HD3 H N N 495 PRO HXT H N N 496 SER N N N N 497 SER CA C N S 498 SER C C N N 499 SER O O N N 500 SER CB C N N 501 SER OG O N N 502 SER OXT O N N 503 SER H H N N 504 SER H2 H N N 505 SER HA H N N 506 SER HB2 H N N 507 SER HB3 H N N 508 SER HG H N N 509 SER HXT H N N 510 SO4 S S N N 511 SO4 O1 O N N 512 SO4 O2 O N N 513 SO4 O3 O N N 514 SO4 O4 O N N 515 THR N N N N 516 THR CA C N S 517 THR C C N N 518 THR O O N N 519 THR CB C N R 520 THR OG1 O N N 521 THR CG2 C N N 522 THR OXT O N N 523 THR H H N N 524 THR H2 H N N 525 THR HA H N N 526 THR HB H N N 527 THR HG1 H N N 528 THR HG21 H N N 529 THR HG22 H N N 530 THR HG23 H N N 531 THR HXT H N N 532 TRP N N N N 533 TRP CA C N S 534 TRP C C N N 535 TRP O O N N 536 TRP CB C N N 537 TRP CG C Y N 538 TRP CD1 C Y N 539 TRP CD2 C Y N 540 TRP NE1 N Y N 541 TRP CE2 C Y N 542 TRP CE3 C Y N 543 TRP CZ2 C Y N 544 TRP CZ3 C Y N 545 TRP CH2 C Y N 546 TRP OXT O N N 547 TRP H H N N 548 TRP H2 H N N 549 TRP HA H N N 550 TRP HB2 H N N 551 TRP HB3 H N N 552 TRP HD1 H N N 553 TRP HE1 H N N 554 TRP HE3 H N N 555 TRP HZ2 H N N 556 TRP HZ3 H N N 557 TRP HH2 H N N 558 TRP HXT H N N 559 TYR N N N N 560 TYR CA C N S 561 TYR C C N N 562 TYR O O N N 563 TYR CB C N N 564 TYR CG C Y N 565 TYR CD1 C Y N 566 TYR CD2 C Y N 567 TYR CE1 C Y N 568 TYR CE2 C Y N 569 TYR CZ C Y N 570 TYR OH O N N 571 TYR OXT O N N 572 TYR H H N N 573 TYR H2 H N N 574 TYR HA H N N 575 TYR HB2 H N N 576 TYR HB3 H N N 577 TYR HD1 H N N 578 TYR HD2 H N N 579 TYR HE1 H N N 580 TYR HE2 H N N 581 TYR HH H N N 582 TYR HXT H N N 583 VAL N N N N 584 VAL CA C N S 585 VAL C C N N 586 VAL O O N N 587 VAL CB C N N 588 VAL CG1 C N N 589 VAL CG2 C N N 590 VAL OXT O N N 591 VAL H H N N 592 VAL H2 H N N 593 VAL HA H N N 594 VAL HB H N N 595 VAL HG11 H N N 596 VAL HG12 H N N 597 VAL HG13 H N N 598 VAL HG21 H N N 599 VAL HG22 H N N 600 VAL HG23 H N N 601 VAL HXT H N N 602 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 AKG C1 O1 doub N N 39 AKG C1 O2 sing N N 40 AKG C1 C2 sing N N 41 AKG O2 HO2 sing N N 42 AKG C2 O5 doub N N 43 AKG C2 C3 sing N N 44 AKG C3 C4 sing N N 45 AKG C3 H31 sing N N 46 AKG C3 H32 sing N N 47 AKG C4 C5 sing N N 48 AKG C4 H41 sing N N 49 AKG C4 H42 sing N N 50 AKG C5 O3 doub N N 51 AKG C5 O4 sing N N 52 AKG O4 HO4 sing N N 53 ALA N CA sing N N 54 ALA N H sing N N 55 ALA N H2 sing N N 56 ALA CA C sing N N 57 ALA CA CB sing N N 58 ALA CA HA sing N N 59 ALA C O doub N N 60 ALA C OXT sing N N 61 ALA CB HB1 sing N N 62 ALA CB HB2 sing N N 63 ALA CB HB3 sing N N 64 ALA OXT HXT sing N N 65 ARG N CA sing N N 66 ARG N H sing N N 67 ARG N H2 sing N N 68 ARG CA C sing N N 69 ARG CA CB sing N N 70 ARG CA HA sing N N 71 ARG C O doub N N 72 ARG C OXT sing N N 73 ARG CB CG sing N N 74 ARG CB HB2 sing N N 75 ARG CB HB3 sing N N 76 ARG CG CD sing N N 77 ARG CG HG2 sing N N 78 ARG CG HG3 sing N N 79 ARG CD NE sing N N 80 ARG CD HD2 sing N N 81 ARG CD HD3 sing N N 82 ARG NE CZ sing N N 83 ARG NE HE sing N N 84 ARG CZ NH1 sing N N 85 ARG CZ NH2 doub N N 86 ARG NH1 HH11 sing N N 87 ARG NH1 HH12 sing N N 88 ARG NH2 HH21 sing N N 89 ARG NH2 HH22 sing N N 90 ARG OXT HXT sing N N 91 ASN N CA sing N N 92 ASN N H sing N N 93 ASN N H2 sing N N 94 ASN CA C sing N N 95 ASN CA CB sing N N 96 ASN CA HA sing N N 97 ASN C O doub N N 98 ASN C OXT sing N N 99 ASN CB CG sing N N 100 ASN CB HB2 sing N N 101 ASN CB HB3 sing N N 102 ASN CG OD1 doub N N 103 ASN CG ND2 sing N N 104 ASN ND2 HD21 sing N N 105 ASN ND2 HD22 sing N N 106 ASN OXT HXT sing N N 107 ASP N CA sing N N 108 ASP N H sing N N 109 ASP N H2 sing N N 110 ASP CA C sing N N 111 ASP CA CB sing N N 112 ASP CA HA sing N N 113 ASP C O doub N N 114 ASP C OXT sing N N 115 ASP CB CG sing N N 116 ASP CB HB2 sing N N 117 ASP CB HB3 sing N N 118 ASP CG OD1 doub N N 119 ASP CG OD2 sing N N 120 ASP OD2 HD2 sing N N 121 ASP OXT HXT sing N N 122 CYS N CA sing N N 123 CYS N H sing N N 124 CYS N H2 sing N N 125 CYS CA C sing N N 126 CYS CA CB sing N N 127 CYS CA HA sing N N 128 CYS C O doub N N 129 CYS C OXT sing N N 130 CYS CB SG sing N N 131 CYS CB HB2 sing N N 132 CYS CB HB3 sing N N 133 CYS SG HG sing N N 134 CYS OXT HXT sing N N 135 DA OP3 P sing N N 136 DA OP3 HOP3 sing N N 137 DA P OP1 doub N N 138 DA P OP2 sing N N 139 DA P "O5'" sing N N 140 DA OP2 HOP2 sing N N 141 DA "O5'" "C5'" sing N N 142 DA "C5'" "C4'" sing N N 143 DA "C5'" "H5'" sing N N 144 DA "C5'" "H5''" sing N N 145 DA "C4'" "O4'" sing N N 146 DA "C4'" "C3'" sing N N 147 DA "C4'" "H4'" sing N N 148 DA "O4'" "C1'" sing N N 149 DA "C3'" "O3'" sing N N 150 DA "C3'" "C2'" sing N N 151 DA "C3'" "H3'" sing N N 152 DA "O3'" "HO3'" sing N N 153 DA "C2'" "C1'" sing N N 154 DA "C2'" "H2'" sing N N 155 DA "C2'" "H2''" sing N N 156 DA "C1'" N9 sing N N 157 DA "C1'" "H1'" sing N N 158 DA N9 C8 sing Y N 159 DA N9 C4 sing Y N 160 DA C8 N7 doub Y N 161 DA C8 H8 sing N N 162 DA N7 C5 sing Y N 163 DA C5 C6 sing Y N 164 DA C5 C4 doub Y N 165 DA C6 N6 sing N N 166 DA C6 N1 doub Y N 167 DA N6 H61 sing N N 168 DA N6 H62 sing N N 169 DA N1 C2 sing Y N 170 DA C2 N3 doub Y N 171 DA C2 H2 sing N N 172 DA N3 C4 sing Y N 173 DC OP3 P sing N N 174 DC OP3 HOP3 sing N N 175 DC P OP1 doub N N 176 DC P OP2 sing N N 177 DC P "O5'" sing N N 178 DC OP2 HOP2 sing N N 179 DC "O5'" "C5'" sing N N 180 DC "C5'" "C4'" sing N N 181 DC "C5'" "H5'" sing N N 182 DC "C5'" "H5''" sing N N 183 DC "C4'" "O4'" sing N N 184 DC "C4'" "C3'" sing N N 185 DC "C4'" "H4'" sing N N 186 DC "O4'" "C1'" sing N N 187 DC "C3'" "O3'" sing N N 188 DC "C3'" "C2'" sing N N 189 DC "C3'" "H3'" sing N N 190 DC "O3'" "HO3'" sing N N 191 DC "C2'" "C1'" sing N N 192 DC "C2'" "H2'" sing N N 193 DC "C2'" "H2''" sing N N 194 DC "C1'" N1 sing N N 195 DC "C1'" "H1'" sing N N 196 DC N1 C2 sing N N 197 DC N1 C6 sing N N 198 DC C2 O2 doub N N 199 DC C2 N3 sing N N 200 DC N3 C4 doub N N 201 DC C4 N4 sing N N 202 DC C4 C5 sing N N 203 DC N4 H41 sing N N 204 DC N4 H42 sing N N 205 DC C5 C6 doub N N 206 DC C5 H5 sing N N 207 DC C6 H6 sing N N 208 DG OP3 P sing N N 209 DG OP3 HOP3 sing N N 210 DG P OP1 doub N N 211 DG P OP2 sing N N 212 DG P "O5'" sing N N 213 DG OP2 HOP2 sing N N 214 DG "O5'" "C5'" sing N N 215 DG "C5'" "C4'" sing N N 216 DG "C5'" "H5'" sing N N 217 DG "C5'" "H5''" sing N N 218 DG "C4'" "O4'" sing N N 219 DG "C4'" "C3'" sing N N 220 DG "C4'" "H4'" sing N N 221 DG "O4'" "C1'" sing N N 222 DG "C3'" "O3'" sing N N 223 DG "C3'" "C2'" sing N N 224 DG "C3'" "H3'" sing N N 225 DG "O3'" "HO3'" sing N N 226 DG "C2'" "C1'" sing N N 227 DG "C2'" "H2'" sing N N 228 DG "C2'" "H2''" sing N N 229 DG "C1'" N9 sing N N 230 DG "C1'" "H1'" sing N N 231 DG N9 C8 sing Y N 232 DG N9 C4 sing Y N 233 DG C8 N7 doub Y N 234 DG C8 H8 sing N N 235 DG N7 C5 sing Y N 236 DG C5 C6 sing N N 237 DG C5 C4 doub Y N 238 DG C6 O6 doub N N 239 DG C6 N1 sing N N 240 DG N1 C2 sing N N 241 DG N1 H1 sing N N 242 DG C2 N2 sing N N 243 DG C2 N3 doub N N 244 DG N2 H21 sing N N 245 DG N2 H22 sing N N 246 DG N3 C4 sing N N 247 DT OP3 P sing N N 248 DT OP3 HOP3 sing N N 249 DT P OP1 doub N N 250 DT P OP2 sing N N 251 DT P "O5'" sing N N 252 DT OP2 HOP2 sing N N 253 DT "O5'" "C5'" sing N N 254 DT "C5'" "C4'" sing N N 255 DT "C5'" "H5'" sing N N 256 DT "C5'" "H5''" sing N N 257 DT "C4'" "O4'" sing N N 258 DT "C4'" "C3'" sing N N 259 DT "C4'" "H4'" sing N N 260 DT "O4'" "C1'" sing N N 261 DT "C3'" "O3'" sing N N 262 DT "C3'" "C2'" sing N N 263 DT "C3'" "H3'" sing N N 264 DT "O3'" "HO3'" sing N N 265 DT "C2'" "C1'" sing N N 266 DT "C2'" "H2'" sing N N 267 DT "C2'" "H2''" sing N N 268 DT "C1'" N1 sing N N 269 DT "C1'" "H1'" sing N N 270 DT N1 C2 sing N N 271 DT N1 C6 sing N N 272 DT C2 O2 doub N N 273 DT C2 N3 sing N N 274 DT N3 C4 sing N N 275 DT N3 H3 sing N N 276 DT C4 O4 doub N N 277 DT C4 C5 sing N N 278 DT C5 C7 sing N N 279 DT C5 C6 doub N N 280 DT C7 H71 sing N N 281 DT C7 H72 sing N N 282 DT C7 H73 sing N N 283 DT C6 H6 sing N N 284 EDO C1 O1 sing N N 285 EDO C1 C2 sing N N 286 EDO C1 H11 sing N N 287 EDO C1 H12 sing N N 288 EDO O1 HO1 sing N N 289 EDO C2 O2 sing N N 290 EDO C2 H21 sing N N 291 EDO C2 H22 sing N N 292 EDO O2 HO2 sing N N 293 GLN N CA sing N N 294 GLN N H sing N N 295 GLN N H2 sing N N 296 GLN CA C sing N N 297 GLN CA CB sing N N 298 GLN CA HA sing N N 299 GLN C O doub N N 300 GLN C OXT sing N N 301 GLN CB CG sing N N 302 GLN CB HB2 sing N N 303 GLN CB HB3 sing N N 304 GLN CG CD sing N N 305 GLN CG HG2 sing N N 306 GLN CG HG3 sing N N 307 GLN CD OE1 doub N N 308 GLN CD NE2 sing N N 309 GLN NE2 HE21 sing N N 310 GLN NE2 HE22 sing N N 311 GLN OXT HXT sing N N 312 GLU N CA sing N N 313 GLU N H sing N N 314 GLU N H2 sing N N 315 GLU CA C sing N N 316 GLU CA CB sing N N 317 GLU CA HA sing N N 318 GLU C O doub N N 319 GLU C OXT sing N N 320 GLU CB CG sing N N 321 GLU CB HB2 sing N N 322 GLU CB HB3 sing N N 323 GLU CG CD sing N N 324 GLU CG HG2 sing N N 325 GLU CG HG3 sing N N 326 GLU CD OE1 doub N N 327 GLU CD OE2 sing N N 328 GLU OE2 HE2 sing N N 329 GLU OXT HXT sing N N 330 GLY N CA sing N N 331 GLY N H sing N N 332 GLY N H2 sing N N 333 GLY CA C sing N N 334 GLY CA HA2 sing N N 335 GLY CA HA3 sing N N 336 GLY C O doub N N 337 GLY C OXT sing N N 338 GLY OXT HXT sing N N 339 HIS N CA sing N N 340 HIS N H sing N N 341 HIS N H2 sing N N 342 HIS CA C sing N N 343 HIS CA CB sing N N 344 HIS CA HA sing N N 345 HIS C O doub N N 346 HIS C OXT sing N N 347 HIS CB CG sing N N 348 HIS CB HB2 sing N N 349 HIS CB HB3 sing N N 350 HIS CG ND1 sing Y N 351 HIS CG CD2 doub Y N 352 HIS ND1 CE1 doub Y N 353 HIS ND1 HD1 sing N N 354 HIS CD2 NE2 sing Y N 355 HIS CD2 HD2 sing N N 356 HIS CE1 NE2 sing Y N 357 HIS CE1 HE1 sing N N 358 HIS NE2 HE2 sing N N 359 HIS OXT HXT sing N N 360 HOH O H1 sing N N 361 HOH O H2 sing N N 362 ILE N CA sing N N 363 ILE N H sing N N 364 ILE N H2 sing N N 365 ILE CA C sing N N 366 ILE CA CB sing N N 367 ILE CA HA sing N N 368 ILE C O doub N N 369 ILE C OXT sing N N 370 ILE CB CG1 sing N N 371 ILE CB CG2 sing N N 372 ILE CB HB sing N N 373 ILE CG1 CD1 sing N N 374 ILE CG1 HG12 sing N N 375 ILE CG1 HG13 sing N N 376 ILE CG2 HG21 sing N N 377 ILE CG2 HG22 sing N N 378 ILE CG2 HG23 sing N N 379 ILE CD1 HD11 sing N N 380 ILE CD1 HD12 sing N N 381 ILE CD1 HD13 sing N N 382 ILE OXT HXT sing N N 383 LEU N CA sing N N 384 LEU N H sing N N 385 LEU N H2 sing N N 386 LEU CA C sing N N 387 LEU CA CB sing N N 388 LEU CA HA sing N N 389 LEU C O doub N N 390 LEU C OXT sing N N 391 LEU CB CG sing N N 392 LEU CB HB2 sing N N 393 LEU CB HB3 sing N N 394 LEU CG CD1 sing N N 395 LEU CG CD2 sing N N 396 LEU CG HG sing N N 397 LEU CD1 HD11 sing N N 398 LEU CD1 HD12 sing N N 399 LEU CD1 HD13 sing N N 400 LEU CD2 HD21 sing N N 401 LEU CD2 HD22 sing N N 402 LEU CD2 HD23 sing N N 403 LEU OXT HXT sing N N 404 LYS N CA sing N N 405 LYS N H sing N N 406 LYS N H2 sing N N 407 LYS CA C sing N N 408 LYS CA CB sing N N 409 LYS CA HA sing N N 410 LYS C O doub N N 411 LYS C OXT sing N N 412 LYS CB CG sing N N 413 LYS CB HB2 sing N N 414 LYS CB HB3 sing N N 415 LYS CG CD sing N N 416 LYS CG HG2 sing N N 417 LYS CG HG3 sing N N 418 LYS CD CE sing N N 419 LYS CD HD2 sing N N 420 LYS CD HD3 sing N N 421 LYS CE NZ sing N N 422 LYS CE HE2 sing N N 423 LYS CE HE3 sing N N 424 LYS NZ HZ1 sing N N 425 LYS NZ HZ2 sing N N 426 LYS NZ HZ3 sing N N 427 LYS OXT HXT sing N N 428 MET N CA sing N N 429 MET N H sing N N 430 MET N H2 sing N N 431 MET CA C sing N N 432 MET CA CB sing N N 433 MET CA HA sing N N 434 MET C O doub N N 435 MET C OXT sing N N 436 MET CB CG sing N N 437 MET CB HB2 sing N N 438 MET CB HB3 sing N N 439 MET CG SD sing N N 440 MET CG HG2 sing N N 441 MET CG HG3 sing N N 442 MET SD CE sing N N 443 MET CE HE1 sing N N 444 MET CE HE2 sing N N 445 MET CE HE3 sing N N 446 MET OXT HXT sing N N 447 PHE N CA sing N N 448 PHE N H sing N N 449 PHE N H2 sing N N 450 PHE CA C sing N N 451 PHE CA CB sing N N 452 PHE CA HA sing N N 453 PHE C O doub N N 454 PHE C OXT sing N N 455 PHE CB CG sing N N 456 PHE CB HB2 sing N N 457 PHE CB HB3 sing N N 458 PHE CG CD1 doub Y N 459 PHE CG CD2 sing Y N 460 PHE CD1 CE1 sing Y N 461 PHE CD1 HD1 sing N N 462 PHE CD2 CE2 doub Y N 463 PHE CD2 HD2 sing N N 464 PHE CE1 CZ doub Y N 465 PHE CE1 HE1 sing N N 466 PHE CE2 CZ sing Y N 467 PHE CE2 HE2 sing N N 468 PHE CZ HZ sing N N 469 PHE OXT HXT sing N N 470 PRO N CA sing N N 471 PRO N CD sing N N 472 PRO N H sing N N 473 PRO CA C sing N N 474 PRO CA CB sing N N 475 PRO CA HA sing N N 476 PRO C O doub N N 477 PRO C OXT sing N N 478 PRO CB CG sing N N 479 PRO CB HB2 sing N N 480 PRO CB HB3 sing N N 481 PRO CG CD sing N N 482 PRO CG HG2 sing N N 483 PRO CG HG3 sing N N 484 PRO CD HD2 sing N N 485 PRO CD HD3 sing N N 486 PRO OXT HXT sing N N 487 SER N CA sing N N 488 SER N H sing N N 489 SER N H2 sing N N 490 SER CA C sing N N 491 SER CA CB sing N N 492 SER CA HA sing N N 493 SER C O doub N N 494 SER C OXT sing N N 495 SER CB OG sing N N 496 SER CB HB2 sing N N 497 SER CB HB3 sing N N 498 SER OG HG sing N N 499 SER OXT HXT sing N N 500 SO4 S O1 doub N N 501 SO4 S O2 doub N N 502 SO4 S O3 sing N N 503 SO4 S O4 sing N N 504 THR N CA sing N N 505 THR N H sing N N 506 THR N H2 sing N N 507 THR CA C sing N N 508 THR CA CB sing N N 509 THR CA HA sing N N 510 THR C O doub N N 511 THR C OXT sing N N 512 THR CB OG1 sing N N 513 THR CB CG2 sing N N 514 THR CB HB sing N N 515 THR OG1 HG1 sing N N 516 THR CG2 HG21 sing N N 517 THR CG2 HG22 sing N N 518 THR CG2 HG23 sing N N 519 THR OXT HXT sing N N 520 TRP N CA sing N N 521 TRP N H sing N N 522 TRP N H2 sing N N 523 TRP CA C sing N N 524 TRP CA CB sing N N 525 TRP CA HA sing N N 526 TRP C O doub N N 527 TRP C OXT sing N N 528 TRP CB CG sing N N 529 TRP CB HB2 sing N N 530 TRP CB HB3 sing N N 531 TRP CG CD1 doub Y N 532 TRP CG CD2 sing Y N 533 TRP CD1 NE1 sing Y N 534 TRP CD1 HD1 sing N N 535 TRP CD2 CE2 doub Y N 536 TRP CD2 CE3 sing Y N 537 TRP NE1 CE2 sing Y N 538 TRP NE1 HE1 sing N N 539 TRP CE2 CZ2 sing Y N 540 TRP CE3 CZ3 doub Y N 541 TRP CE3 HE3 sing N N 542 TRP CZ2 CH2 doub Y N 543 TRP CZ2 HZ2 sing N N 544 TRP CZ3 CH2 sing Y N 545 TRP CZ3 HZ3 sing N N 546 TRP CH2 HH2 sing N N 547 TRP OXT HXT sing N N 548 TYR N CA sing N N 549 TYR N H sing N N 550 TYR N H2 sing N N 551 TYR CA C sing N N 552 TYR CA CB sing N N 553 TYR CA HA sing N N 554 TYR C O doub N N 555 TYR C OXT sing N N 556 TYR CB CG sing N N 557 TYR CB HB2 sing N N 558 TYR CB HB3 sing N N 559 TYR CG CD1 doub Y N 560 TYR CG CD2 sing Y N 561 TYR CD1 CE1 sing Y N 562 TYR CD1 HD1 sing N N 563 TYR CD2 CE2 doub Y N 564 TYR CD2 HD2 sing N N 565 TYR CE1 CZ doub Y N 566 TYR CE1 HE1 sing N N 567 TYR CE2 CZ sing Y N 568 TYR CE2 HE2 sing N N 569 TYR CZ OH sing N N 570 TYR OH HH sing N N 571 TYR OXT HXT sing N N 572 VAL N CA sing N N 573 VAL N H sing N N 574 VAL N H2 sing N N 575 VAL CA C sing N N 576 VAL CA CB sing N N 577 VAL CA HA sing N N 578 VAL C O doub N N 579 VAL C OXT sing N N 580 VAL CB CG1 sing N N 581 VAL CB CG2 sing N N 582 VAL CB HB sing N N 583 VAL CG1 HG11 sing N N 584 VAL CG1 HG12 sing N N 585 VAL CG1 HG13 sing N N 586 VAL CG2 HG21 sing N N 587 VAL CG2 HG22 sing N N 588 VAL CG2 HG23 sing N N 589 VAL OXT HXT sing N N 590 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5CG9 'double helix' 5CG9 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 2 1_555 C DT 11 1_555 -0.526 -0.300 -0.762 -19.601 -1.069 -5.113 1 B_DA4:DT24_C B 4 ? C 24 ? 20 1 1 B DT 3 1_555 C DA 10 1_555 0.180 -0.291 -0.035 -0.054 -14.751 -8.881 2 B_DT5:DA23_C B 5 ? C 23 ? 20 1 1 B DG 4 1_555 C DC 9 1_555 -0.447 -0.024 -0.273 -5.973 -0.778 5.244 3 B_DG6:DC22_C B 6 ? C 22 ? 19 1 1 B DC 5 1_555 C DG 8 1_555 0.652 0.069 -0.050 7.144 -4.933 8.172 4 B_DC7:DG21_C B 7 ? C 21 ? 19 1 1 B DC 7 1_555 C DG 6 1_555 0.045 -0.047 0.659 -26.607 -12.009 5.608 5 B_DC9:DG19_C B 9 ? C 19 ? 19 1 1 B DT 8 1_555 C DA 5 1_555 0.337 -0.074 0.293 -8.939 -7.595 3.830 6 B_DT10:DA18_C B 10 ? C 18 ? 20 1 1 B DG 9 1_555 C DC 4 1_555 -0.553 -0.303 -0.343 -12.117 -13.391 1.859 7 B_DG11:DC17_C B 11 ? C 17 ? 19 1 1 B DA 10 1_555 C DT 3 1_555 0.125 -0.097 0.342 5.406 -15.855 -4.032 8 B_DA12:DT16_C B 12 ? C 16 ? 20 1 1 B DC 11 1_555 C DG 2 1_555 0.221 -0.018 -0.159 7.760 -6.354 3.844 9 B_DC13:DG15_C B 13 ? C 15 ? 19 1 1 E DC 1 1_555 F DG 13 1_555 1.441 -0.002 -0.870 26.679 -14.105 -8.733 10 E_DC3:DG26_F E 3 ? F 26 ? ? ? 1 E DA 2 1_555 F DT 11 1_555 -0.726 -0.425 -0.943 -19.361 -16.902 1.184 11 E_DA4:DT24_F E 4 ? F 24 ? 20 1 1 E DT 3 1_555 F DA 10 1_555 0.319 -0.384 -0.147 1.607 -27.867 -0.474 12 E_DT5:DA23_F E 5 ? F 23 ? 20 1 1 E DG 4 1_555 F DC 9 1_555 -0.609 0.497 -0.014 -11.947 -1.605 14.880 13 E_DG6:DC22_F E 6 ? F 22 ? ? 1 1 E DC 5 1_555 F DG 8 1_555 0.465 0.400 0.472 14.394 2.885 11.913 14 E_DC7:DG21_F E 7 ? F 21 ? ? 1 1 E DC 7 1_555 F DG 6 1_555 -0.471 0.104 0.800 -30.751 -20.662 8.562 15 E_DC9:DG19_F E 9 ? F 19 ? 19 1 1 E DT 8 1_555 F DA 5 1_555 0.365 0.032 0.281 -19.273 -17.280 5.534 16 E_DT10:DA18_F E 10 ? F 18 ? 20 1 1 E DG 9 1_555 F DC 4 1_555 -0.968 0.036 -0.431 -4.530 -7.606 7.634 17 E_DG11:DC17_F E 11 ? F 17 ? 19 1 1 E DA 10 1_555 F DT 3 1_555 0.710 0.060 0.377 11.789 -4.377 3.859 18 E_DA12:DT16_F E 12 ? F 16 ? 20 1 1 E DC 11 1_555 F DG 2 1_555 0.614 0.149 0.219 27.250 5.598 4.019 19 E_DC13:DG15_F E 13 ? F 15 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 2 1_555 C DT 11 1_555 B DT 3 1_555 C DA 10 1_555 -0.453 -0.459 3.054 -6.741 -0.205 38.726 -0.660 -0.085 3.089 -0.307 10.072 39.287 1 BB_DA4DT5:DA23DT24_CC B 4 ? C 24 ? B 5 ? C 23 ? 1 B DT 3 1_555 C DA 10 1_555 B DG 4 1_555 C DC 9 1_555 -0.112 -0.261 3.519 -0.915 5.259 28.065 -1.809 0.004 3.416 10.721 1.865 28.558 2 BB_DT5DG6:DC22DA23_CC B 5 ? C 23 ? B 6 ? C 22 ? 1 B DG 4 1_555 C DC 9 1_555 B DC 5 1_555 C DG 8 1_555 -0.556 -0.224 2.974 -0.740 9.962 29.558 -2.131 0.908 2.767 18.860 1.401 31.165 3 BB_DG6DC7:DG21DC22_CC B 6 ? C 22 ? B 7 ? C 21 ? 1 B DC 7 1_555 C DG 6 1_555 B DT 8 1_555 C DA 5 1_555 -0.493 0.157 2.915 2.614 7.183 29.266 -0.997 1.417 2.820 13.919 -5.065 30.226 4 BB_DC9DT10:DA18DG19_CC B 9 ? C 19 ? B 10 ? C 18 ? 1 B DT 8 1_555 C DA 5 1_555 B DG 9 1_555 C DC 4 1_555 -0.480 2.086 3.408 1.049 -2.217 39.584 3.339 0.833 3.277 -3.270 -1.547 39.657 5 BB_DT10DG11:DC17DA18_CC B 10 ? C 18 ? B 11 ? C 17 ? 1 B DG 9 1_555 C DC 4 1_555 B DA 10 1_555 C DT 3 1_555 -0.420 0.132 2.941 -6.626 1.861 32.458 -0.054 -0.281 2.969 3.283 11.691 33.161 6 BB_DG11DA12:DT16DC17_CC B 11 ? C 17 ? B 12 ? C 16 ? 1 B DA 10 1_555 C DT 3 1_555 B DC 11 1_555 C DG 2 1_555 0.802 -0.620 3.194 3.851 1.552 31.345 -1.422 -0.768 3.233 2.857 -7.089 31.612 7 BB_DA12DC13:DG15DT16_CC B 12 ? C 16 ? B 13 ? C 15 ? 1 E DC 1 1_555 F DG 13 1_555 E DA 2 1_555 F DT 11 1_555 -0.456 2.085 6.779 -21.723 33.982 24.652 -4.417 -3.923 5.320 50.412 32.226 47.001 8 EE_DC3DA4:DT24DG26_FF E 3 ? F 26 ? E 4 ? F 24 ? 1 E DA 2 1_555 F DT 11 1_555 E DT 3 1_555 F DA 10 1_555 -0.204 0.250 3.004 -9.470 -1.205 42.965 0.440 -0.556 2.975 -1.621 12.742 43.964 9 EE_DA4DT5:DA23DT24_FF E 4 ? F 24 ? E 5 ? F 23 ? 1 E DT 3 1_555 F DA 10 1_555 E DG 4 1_555 F DC 9 1_555 -0.187 -0.552 3.764 -3.742 2.373 22.271 -2.385 -1.076 3.667 6.066 9.566 22.702 10 EE_DT5DG6:DC22DA23_FF E 5 ? F 23 ? E 6 ? F 22 ? 1 E DG 4 1_555 F DC 9 1_555 E DC 5 1_555 F DG 8 1_555 -0.687 0.006 2.704 -3.168 7.343 28.529 -1.292 0.782 2.681 14.542 6.274 29.607 11 EE_DG6DC7:DG21DC22_FF E 6 ? F 22 ? E 7 ? F 21 ? 1 E DC 7 1_555 F DG 6 1_555 E DT 8 1_555 F DA 5 1_555 -0.832 0.549 3.004 2.443 12.064 29.714 -1.051 1.918 2.925 22.355 -4.527 32.109 12 EE_DC9DT10:DA18DG19_FF E 9 ? F 19 ? E 10 ? F 18 ? 1 E DT 8 1_555 F DA 5 1_555 E DG 9 1_555 F DC 4 1_555 -0.528 3.005 2.849 -3.626 -5.738 40.675 4.774 0.430 2.458 -8.185 5.173 41.214 13 EE_DT10DG11:DC17DA18_FF E 10 ? F 18 ? E 11 ? F 17 ? 1 E DG 9 1_555 F DC 4 1_555 E DA 10 1_555 F DT 3 1_555 0.203 1.153 3.161 -7.194 -4.917 38.877 2.230 -1.083 2.918 -7.277 10.646 39.805 14 EE_DG11DA12:DT16DC17_FF E 11 ? F 17 ? E 12 ? F 16 ? 1 E DA 10 1_555 F DT 3 1_555 E DC 11 1_555 F DG 2 1_555 0.392 -0.495 3.062 0.573 7.112 24.164 -3.048 -0.745 2.811 16.534 -1.332 25.181 15 EE_DA12DC13:DG15DT16_FF E 12 ? F 16 ? E 13 ? F 15 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM049245 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM105132 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 '2-OXOGLUTARIC ACID' AKG 6 'MANGANESE (II) ION' MN 7 1,2-ETHANEDIOL EDO 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4LT5 _pdbx_initial_refinement_model.details ? #