HEADER TRANSCRIPTION 10-JUL-15 5CH6 TITLE CRYSTAL STRUCTURE OF FRIGIDA FLOWERING-TIME REGULATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRIGIDA; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VITIS VINIFERA; SOURCE 3 ORGANISM_COMMON: GRAPE; SOURCE 4 ORGANISM_TAXID: 29760; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS FLOWERING, EPIGENETICS, TRANSCRIPTION ACTIVATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.HYUN,J.J.SONG REVDAT 3 20-MAR-24 5CH6 1 REMARK REVDAT 2 19-FEB-20 5CH6 1 REMARK REVDAT 1 25-MAY-16 5CH6 0 JRNL AUTH K.HYUN,J.E.OH,J.PARK,Y.S.NOH,J.J.SONG JRNL TITL STRUCTURAL ANALYSIS OF FRIGIDA FLOWERING-TIME REGULATOR JRNL REF MOL PLANT V. 9 618 2016 JRNL REFN ESSN 1752-9867 JRNL PMID 26633860 JRNL DOI 10.1016/J.MOLP.2015.11.009 REMARK 2 REMARK 2 RESOLUTION. 3.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 160159.340 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 40712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.600 REMARK 3 FREE R VALUE TEST SET COUNT : 3509 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.45 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5826 REMARK 3 BIN R VALUE (WORKING SET) : 0.3610 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 0.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 11 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.107 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6819 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 121.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.07000 REMARK 3 B22 (A**2) : 7.07000 REMARK 3 B33 (A**2) : -14.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM SIGMAA (A) : 0.71 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.66 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.650 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 85.17 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR/PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR/DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR/WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR/ION.PARAM REMARK 3 PARAMETER FILE 5 : CNS_TOPPAR/CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR/PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR/DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR/WATER.TOP REMARK 3 TOPOLOGY FILE 4 : CNS_TOPPAR/ION.TOP REMARK 3 TOPOLOGY FILE 5 : CNS_TOPPAR/CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 5CH6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211574. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43466 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 83.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE, SODIUM ACETATE REMARK 280 TRIHYDRATE PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 131.16300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 74.44200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 74.44200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 196.74450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 74.44200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 74.44200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.58150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 74.44200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.44200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 196.74450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 74.44200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.44200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.58150 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 131.16300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 392 REMARK 465 GLY A 393 REMARK 465 LYS A 394 REMARK 465 PRO B 106 REMARK 465 ALA B 107 REMARK 465 GLN B 108 REMARK 465 THR B 109 REMARK 465 PRO C 106 REMARK 465 ALA C 107 REMARK 465 GLN C 108 REMARK 465 THR C 109 REMARK 465 SER C 110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 365 N SER A 369 2.04 REMARK 500 O PHE C 166 NH2 ARG C 219 2.10 REMARK 500 NH1 ARG A 141 OE2 GLU A 191 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN B 292 CD GLN B 292 OE1 0.219 REMARK 500 GLN B 292 CD GLN B 292 NE2 0.224 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 180 N - CA - C ANGL. DEV. = -17.8 DEGREES REMARK 500 GLY B 370 N - CA - C ANGL. DEV. = -21.2 DEGREES REMARK 500 PRO C 152 C - N - CA ANGL. DEV. = 10.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 146 -70.65 -57.47 REMARK 500 PHE A 166 -71.32 -76.83 REMARK 500 HIS A 178 10.21 -53.40 REMARK 500 MET A 179 81.01 74.45 REMARK 500 GLU A 200 79.59 60.86 REMARK 500 SER A 274 -73.50 -58.71 REMARK 500 ARG A 275 -17.85 78.25 REMARK 500 PRO A 311 68.66 -68.11 REMARK 500 ILE A 315 -70.19 -63.90 REMARK 500 GLU A 333 67.95 64.80 REMARK 500 ASP A 334 -17.15 77.45 REMARK 500 PHE B 166 -71.43 -61.77 REMARK 500 LYS B 175 -142.75 -78.75 REMARK 500 ALA B 176 82.09 78.63 REMARK 500 THR B 177 13.95 -54.56 REMARK 500 HIS B 178 -179.93 -60.14 REMARK 500 PRO B 181 42.80 -88.00 REMARK 500 LEU B 240 -71.11 -50.69 REMARK 500 ARG B 275 -17.86 86.85 REMARK 500 PRO B 311 73.72 -67.57 REMARK 500 ARG B 331 -73.28 -133.01 REMARK 500 ASP B 334 34.74 38.84 REMARK 500 LYS B 366 -73.37 -101.71 REMARK 500 GLU B 392 -79.20 -48.08 REMARK 500 SER C 123 -73.45 -58.40 REMARK 500 LYS C 153 67.41 69.25 REMARK 500 ILE C 162 -74.02 -76.30 REMARK 500 SER C 170 162.12 176.99 REMARK 500 ALA C 172 -144.41 43.84 REMARK 500 PHE C 173 -61.98 -134.23 REMARK 500 HIS C 178 -56.75 -132.08 REMARK 500 MET C 179 75.07 72.59 REMARK 500 ASP C 197 72.94 59.73 REMARK 500 GLU C 223 5.48 -61.46 REMARK 500 LEU C 240 -71.19 -57.84 REMARK 500 ARG C 275 -15.78 88.81 REMARK 500 GLN C 292 2.28 86.18 REMARK 500 ARG C 331 -62.04 -127.81 REMARK 500 ASP C 334 -132.51 57.55 REMARK 500 SER C 335 75.75 36.88 REMARK 500 LYS C 366 -60.53 -121.11 REMARK 500 GLU C 392 -176.61 -67.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 179 VAL A 180 144.48 REMARK 500 GLU A 333 ASP A 334 145.40 REMARK 500 SER B 369 GLY B 370 -133.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE OF THE PROTEIN IS BASED ON DATABASE XP_002283789.1, AND REMARK 999 NOT AVAILABLE FROM UNIPROT AT THE TIME OF PROCESSING. DBREF 5CH6 A 106 394 PDB 5CH6 5CH6 106 394 DBREF 5CH6 B 106 394 PDB 5CH6 5CH6 106 394 DBREF 5CH6 C 106 394 PDB 5CH6 5CH6 106 394 SEQRES 1 A 289 PRO ALA GLN THR SER VAL SER GLU LEU GLY PHE LEU CYS SEQRES 2 A 289 GLY MET MET ARG SER ARG GLY LEU ARG LYS TYR ILE ILE SEQRES 3 A 289 SER HIS LEU SER ASP VAL ALA LYS LEU ARG GLU GLU VAL SEQRES 4 A 289 PRO ALA ALA LEU LYS GLY ALA PRO LYS PRO ALA LYS LEU SEQRES 5 A 289 VAL LEU GLU CYS ILE GLY ARG PHE PHE LEU GLN GLY SER SEQRES 6 A 289 LYS ALA PHE GLY LYS ALA THR HIS MET VAL PRO SER ARG SEQRES 7 A 289 GLN ALA SER LEU LEU ILE LEU GLU PHE PHE LEU LEU SER SEQRES 8 A 289 ASP CYS THR GLU MET GLU PRO SER VAL LYS GLU GLU ALA SEQRES 9 A 289 ASP LEU ALA ALA VAL THR TRP ARG LYS ARG LEU ILE ASN SEQRES 10 A 289 GLU GLY GLY VAL SER ASN ALA SER ASP ILE ASP ALA ARG SEQRES 11 A 289 GLY LEU LEU LEU LEU VAL ALA SER PHE GLY ILE PRO ALA SEQRES 12 A 289 LEU PHE ARG ASN GLU ASP LEU ARG ASN LEU ILE ARG LEU SEQRES 13 A 289 SER CYS PRO LYS GLU ILE SER ASP ALA LEU ARG ARG SER SEQRES 14 A 289 ARG PHE LEU LEU ALA ARG VAL PRO ASP VAL ILE GLN GLY SEQRES 15 A 289 MET ILE LYS ASN GLN MET ASN VAL GLU ALA VAL ASP PHE SEQRES 16 A 289 ALA TYR THR PHE GLY LEU GLU GLU LYS PHE PRO ILE TRP SEQRES 17 A 289 LYS ILE LEU THR SER PHE LEU ARG GLU HIS LYS GLU GLU SEQRES 18 A 289 TRP LYS ARG THR ARG GLU GLU ASP SER PRO ILE ARG LEU SEQRES 19 A 289 LYS LYS ALA ASN GLU ASN TYR LEU SER ALA MET LYS SER SEQRES 20 A 289 VAL THR ARG CYS LEU GLU ASP HIS ARG VAL ASP PRO SER SEQRES 21 A 289 LYS LEU LEU SER GLY TRP HIS ILE ASP GLU LYS ILE ILE SEQRES 22 A 289 GLN LEU GLU LYS GLU MET ALA ASP LEU ASP LYS LYS MET SEQRES 23 A 289 GLU GLY LYS SEQRES 1 B 289 PRO ALA GLN THR SER VAL SER GLU LEU GLY PHE LEU CYS SEQRES 2 B 289 GLY MET MET ARG SER ARG GLY LEU ARG LYS TYR ILE ILE SEQRES 3 B 289 SER HIS LEU SER ASP VAL ALA LYS LEU ARG GLU GLU VAL SEQRES 4 B 289 PRO ALA ALA LEU LYS GLY ALA PRO LYS PRO ALA LYS LEU SEQRES 5 B 289 VAL LEU GLU CYS ILE GLY ARG PHE PHE LEU GLN GLY SER SEQRES 6 B 289 LYS ALA PHE GLY LYS ALA THR HIS MET VAL PRO SER ARG SEQRES 7 B 289 GLN ALA SER LEU LEU ILE LEU GLU PHE PHE LEU LEU SER SEQRES 8 B 289 ASP CYS THR GLU MET GLU PRO SER VAL LYS GLU GLU ALA SEQRES 9 B 289 ASP LEU ALA ALA VAL THR TRP ARG LYS ARG LEU ILE ASN SEQRES 10 B 289 GLU GLY GLY VAL SER ASN ALA SER ASP ILE ASP ALA ARG SEQRES 11 B 289 GLY LEU LEU LEU LEU VAL ALA SER PHE GLY ILE PRO ALA SEQRES 12 B 289 LEU PHE ARG ASN GLU ASP LEU ARG ASN LEU ILE ARG LEU SEQRES 13 B 289 SER CYS PRO LYS GLU ILE SER ASP ALA LEU ARG ARG SER SEQRES 14 B 289 ARG PHE LEU LEU ALA ARG VAL PRO ASP VAL ILE GLN GLY SEQRES 15 B 289 MET ILE LYS ASN GLN MET ASN VAL GLU ALA VAL ASP PHE SEQRES 16 B 289 ALA TYR THR PHE GLY LEU GLU GLU LYS PHE PRO ILE TRP SEQRES 17 B 289 LYS ILE LEU THR SER PHE LEU ARG GLU HIS LYS GLU GLU SEQRES 18 B 289 TRP LYS ARG THR ARG GLU GLU ASP SER PRO ILE ARG LEU SEQRES 19 B 289 LYS LYS ALA ASN GLU ASN TYR LEU SER ALA MET LYS SER SEQRES 20 B 289 VAL THR ARG CYS LEU GLU ASP HIS ARG VAL ASP PRO SER SEQRES 21 B 289 LYS LEU LEU SER GLY TRP HIS ILE ASP GLU LYS ILE ILE SEQRES 22 B 289 GLN LEU GLU LYS GLU MET ALA ASP LEU ASP LYS LYS MET SEQRES 23 B 289 GLU GLY LYS SEQRES 1 C 289 PRO ALA GLN THR SER VAL SER GLU LEU GLY PHE LEU CYS SEQRES 2 C 289 GLY MET MET ARG SER ARG GLY LEU ARG LYS TYR ILE ILE SEQRES 3 C 289 SER HIS LEU SER ASP VAL ALA LYS LEU ARG GLU GLU VAL SEQRES 4 C 289 PRO ALA ALA LEU LYS GLY ALA PRO LYS PRO ALA LYS LEU SEQRES 5 C 289 VAL LEU GLU CYS ILE GLY ARG PHE PHE LEU GLN GLY SER SEQRES 6 C 289 LYS ALA PHE GLY LYS ALA THR HIS MET VAL PRO SER ARG SEQRES 7 C 289 GLN ALA SER LEU LEU ILE LEU GLU PHE PHE LEU LEU SER SEQRES 8 C 289 ASP CYS THR GLU MET GLU PRO SER VAL LYS GLU GLU ALA SEQRES 9 C 289 ASP LEU ALA ALA VAL THR TRP ARG LYS ARG LEU ILE ASN SEQRES 10 C 289 GLU GLY GLY VAL SER ASN ALA SER ASP ILE ASP ALA ARG SEQRES 11 C 289 GLY LEU LEU LEU LEU VAL ALA SER PHE GLY ILE PRO ALA SEQRES 12 C 289 LEU PHE ARG ASN GLU ASP LEU ARG ASN LEU ILE ARG LEU SEQRES 13 C 289 SER CYS PRO LYS GLU ILE SER ASP ALA LEU ARG ARG SER SEQRES 14 C 289 ARG PHE LEU LEU ALA ARG VAL PRO ASP VAL ILE GLN GLY SEQRES 15 C 289 MET ILE LYS ASN GLN MET ASN VAL GLU ALA VAL ASP PHE SEQRES 16 C 289 ALA TYR THR PHE GLY LEU GLU GLU LYS PHE PRO ILE TRP SEQRES 17 C 289 LYS ILE LEU THR SER PHE LEU ARG GLU HIS LYS GLU GLU SEQRES 18 C 289 TRP LYS ARG THR ARG GLU GLU ASP SER PRO ILE ARG LEU SEQRES 19 C 289 LYS LYS ALA ASN GLU ASN TYR LEU SER ALA MET LYS SER SEQRES 20 C 289 VAL THR ARG CYS LEU GLU ASP HIS ARG VAL ASP PRO SER SEQRES 21 C 289 LYS LEU LEU SER GLY TRP HIS ILE ASP GLU LYS ILE ILE SEQRES 22 C 289 GLN LEU GLU LYS GLU MET ALA ASP LEU ASP LYS LYS MET SEQRES 23 C 289 GLU GLY LYS HELIX 1 AA1 PRO A 106 VAL A 111 5 6 HELIX 2 AA2 SER A 112 MET A 120 1 9 HELIX 3 AA3 ARG A 122 HIS A 133 1 12 HELIX 4 AA4 ASP A 136 GLY A 150 1 15 HELIX 5 AA5 LYS A 153 GLY A 163 1 11 HELIX 6 AA6 GLY A 163 GLN A 168 1 6 HELIX 7 AA7 VAL A 180 LEU A 195 1 16 HELIX 8 AA8 GLU A 202 GLU A 223 1 22 HELIX 9 AA9 SER A 230 GLY A 245 1 16 HELIX 10 AB1 ARG A 251 SER A 262 1 12 HELIX 11 AB2 CYS A 263 ARG A 272 1 10 HELIX 12 AB3 PHE A 276 LYS A 290 1 15 HELIX 13 AB4 MET A 293 PHE A 304 1 12 HELIX 14 AB5 GLY A 305 PHE A 310 5 6 HELIX 15 AB6 PRO A 311 ARG A 329 1 19 HELIX 16 AB7 SER A 335 HIS A 360 1 26 HELIX 17 AB8 ASP A 363 SER A 369 1 7 HELIX 18 AB9 HIS A 372 LYS A 390 1 19 HELIX 19 AC1 VAL B 111 MET B 120 1 10 HELIX 20 AC2 ARG B 122 HIS B 133 1 12 HELIX 21 AC3 ASP B 136 LEU B 148 1 13 HELIX 22 AC4 LYS B 149 ALA B 151 5 3 HELIX 23 AC5 LYS B 153 GLY B 169 1 17 HELIX 24 AC6 SER B 182 SER B 196 1 15 HELIX 25 AC7 GLU B 202 GLU B 223 1 22 HELIX 26 AC8 SER B 230 GLY B 245 1 16 HELIX 27 AC9 ARG B 251 SER B 262 1 12 HELIX 28 AD1 CYS B 263 GLU B 266 5 4 HELIX 29 AD2 ILE B 267 ARG B 272 1 6 HELIX 30 AD3 PHE B 276 ASN B 291 1 16 HELIX 31 AD4 MET B 293 PHE B 304 1 12 HELIX 32 AD5 PRO B 311 THR B 330 1 20 HELIX 33 AD6 SER B 335 HIS B 360 1 26 HELIX 34 AD7 ASP B 363 LEU B 368 1 6 HELIX 35 AD8 HIS B 372 MET B 391 1 20 HELIX 36 AD9 SER C 112 MET C 121 1 10 HELIX 37 AE1 ARG C 122 LEU C 134 1 13 HELIX 38 AE2 ASP C 136 GLY C 150 1 15 HELIX 39 AE3 LYS C 153 CYS C 161 1 9 HELIX 40 AE4 VAL C 180 LEU C 195 1 16 HELIX 41 AE5 GLU C 202 GLU C 223 1 22 HELIX 42 AE6 SER C 230 GLY C 245 1 16 HELIX 43 AE7 ARG C 251 SER C 262 1 12 HELIX 44 AE8 ILE C 267 ARG C 272 1 6 HELIX 45 AE9 PHE C 276 ASN C 291 1 16 HELIX 46 AF1 MET C 293 PHE C 304 1 12 HELIX 47 AF2 LEU C 306 PHE C 310 5 5 HELIX 48 AF3 PRO C 311 THR C 330 1 20 HELIX 49 AF4 SER C 335 HIS C 360 1 26 HELIX 50 AF5 HIS C 372 LYS C 390 1 19 CRYST1 148.884 148.884 262.326 90.00 90.00 90.00 P 43 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006717 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003812 0.00000