HEADER HYDROLASE 10-JUL-15 5CHM TITLE CRYSTAL STRUCTURE OF FOX-4 CEPHAMYCINASE COMPLEXED WITH CEFTAZIDIME TITLE 2 BATSI (LP06) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-382; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FOX-4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHMTEV KEYWDS BETA-LACTAMASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,R.TORO,S.LEFURGY,S.C.ALMO REVDAT 4 23-OCT-24 5CHM 1 REMARK REVDAT 3 27-SEP-23 5CHM 1 REMARK REVDAT 2 16-SEP-20 5CHM 1 JRNL REMARK LINK REVDAT 1 03-AUG-16 5CHM 0 JRNL AUTH S.T.LEFURGY,E.CASELLI,M.A.TARACILA,V.N.MALASHKEVICH,B.BIJU, JRNL AUTH 2 K.M.PAPP-WALLACE,J.B.BONANNO,F.PRATI,S.C.ALMO,R.A.BONOMO JRNL TITL STRUCTURES OF FOX-4 CEPHAMYCINASE IN COMPLEX WITH JRNL TITL 2 TRANSITION-STATE ANALOG INHIBITORS. JRNL REF BIOMOLECULES V. 10 2020 JRNL REFN ESSN 2218-273X JRNL PMID 32349291 JRNL DOI 10.3390/BIOM10050671 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 25823 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.9663 - 5.0409 0.95 2576 125 0.1426 0.1884 REMARK 3 2 5.0409 - 4.0059 1.00 2672 161 0.1196 0.1526 REMARK 3 3 4.0059 - 3.5009 1.00 2668 159 0.1450 0.1805 REMARK 3 4 3.5009 - 3.1814 0.99 2610 198 0.1723 0.2625 REMARK 3 5 3.1814 - 2.9537 0.99 2664 137 0.1815 0.2593 REMARK 3 6 2.9537 - 2.7798 1.00 2721 145 0.1859 0.2407 REMARK 3 7 2.7798 - 2.6407 1.00 2659 140 0.1775 0.2657 REMARK 3 8 2.6407 - 2.5259 1.00 2718 129 0.1712 0.1974 REMARK 3 9 2.5259 - 2.4287 1.00 2705 122 0.1646 0.2053 REMARK 3 10 2.4287 - 2.3449 0.99 2657 147 0.1719 0.2289 REMARK 3 11 2.3449 - 2.2717 0.99 2690 120 0.1858 0.3051 REMARK 3 12 2.2717 - 2.2068 0.99 2732 117 0.2095 0.2638 REMARK 3 13 2.2068 - 2.1487 1.00 2673 134 0.1982 0.2897 REMARK 3 14 2.1487 - 2.0963 0.99 2682 136 0.1996 0.2795 REMARK 3 15 2.0963 - 2.0487 0.99 2689 119 0.2048 0.2378 REMARK 3 16 2.0487 - 2.0051 0.99 2652 121 0.2026 0.3009 REMARK 3 17 2.0051 - 1.9650 0.99 2695 159 0.2457 0.3554 REMARK 3 18 1.9650 - 1.9279 0.99 2662 140 0.2458 0.3787 REMARK 3 19 1.9279 - 1.9000 0.90 2385 143 0.2855 0.3008 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2788 REMARK 3 ANGLE : 1.087 3795 REMARK 3 CHIRALITY : 0.042 414 REMARK 3 PLANARITY : 0.005 496 REMARK 3 DIHEDRAL : 13.512 1007 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 7:361) REMARK 3 ORIGIN FOR THE GROUP (A): 65.4665 10.7516 15.8824 REMARK 3 T TENSOR REMARK 3 T11: 0.1388 T22: 0.1367 REMARK 3 T33: 0.1706 T12: -0.0151 REMARK 3 T13: 0.0145 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.7203 L22: 2.0679 REMARK 3 L33: 2.0953 L12: -0.3019 REMARK 3 L13: 0.2169 L23: 0.4106 REMARK 3 S TENSOR REMARK 3 S11: -0.0092 S12: 0.1056 S13: -0.0653 REMARK 3 S21: -0.1405 S22: 0.0457 S23: -0.1703 REMARK 3 S31: 0.1492 S32: 0.0894 S33: -0.0120 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CHM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211644. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27189 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.42200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6, PHASER REMARK 200 STARTING MODEL: 5CGS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M ZINC ACETATE, 20% PEG 3350, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.57200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 HIS A 1 REMARK 465 MET A 2 REMARK 465 SER A 3 REMARK 465 GLY A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OXT GLU A 361 O HOH A 501 2.03 REMARK 500 O HOH A 632 O HOH A 704 2.05 REMARK 500 O HOH A 567 O HOH A 628 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 349 C LYS A 350 N 0.149 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 93 85.30 -155.19 REMARK 500 ASP A 123 -77.73 -7.54 REMARK 500 ASP A 126 28.65 -147.28 REMARK 500 THR A 177 -57.71 -122.50 REMARK 500 TYR A 222 27.09 -165.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CB4 A 400 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 39 ND1 REMARK 620 2 ASP A 274 OD1 6.3 REMARK 620 3 ASP A 274 OD2 8.7 2.6 REMARK 620 4 HOH A 520 O 105.6 107.9 109.8 REMARK 620 5 HOH A 678 O 113.5 107.4 105.5 89.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 84 OE1 REMARK 620 2 HIS A 185 ND1 25.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 124 OE1 REMARK 620 2 ASP A 126 OD2 108.5 REMARK 620 3 HIS A 147 NE2 60.6 48.0 REMARK 620 4 ACT A 407 OXT 93.0 111.5 108.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 160 NE2 REMARK 620 2 HOH A 569 O 101.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 405 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 255 ND1 REMARK 620 2 HOH A 681 O 92.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 406 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 361 OE2 REMARK 620 2 HOH A 604 O 85.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CB4 A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CGS RELATED DB: PDB REMARK 900 RELATED ID: 5CGW RELATED DB: PDB REMARK 900 RELATED ID: 5CGX RELATED DB: PDB REMARK 900 RELATED ID: 5CHJ RELATED DB: PDB DBREF 5CHM A 3 361 UNP Q9L387 Q9L387_ECOLX 24 382 SEQADV 5CHM GLY A 0 UNP Q9L387 EXPRESSION TAG SEQADV 5CHM HIS A 1 UNP Q9L387 EXPRESSION TAG SEQADV 5CHM MET A 2 UNP Q9L387 EXPRESSION TAG SEQRES 1 A 362 GLY HIS MET SER GLY GLU ALA PRO LEU THR ALA THR VAL SEQRES 2 A 362 ASP GLY ILE ILE GLN PRO MET LEU LYS ALA TYR ARG ILE SEQRES 3 A 362 PRO GLY MET ALA VAL ALA VAL LEU LYS ASP GLY LYS ALA SEQRES 4 A 362 HIS TYR PHE ASN TYR GLY VAL ALA ASN ARG GLU SER GLY SEQRES 5 A 362 GLN ARG VAL SER GLU GLN THR LEU PHE GLU ILE GLY SER SEQRES 6 A 362 VAL SER LYS THR LEU THR ALA THR LEU GLY ALA TYR ALA SEQRES 7 A 362 ALA VAL LYS GLY GLY PHE GLU LEU ASP ASP LYS VAL SER SEQRES 8 A 362 GLN HIS ALA PRO TRP LEU LYS GLY SER ALA PHE ASP GLY SEQRES 9 A 362 VAL THR MET ALA GLU LEU ALA THR TYR SER ALA GLY GLY SEQRES 10 A 362 LEU PRO LEU GLN PHE PRO ASP GLU VAL ASP SER ASN ASP SEQRES 11 A 362 LYS MET GLN THR TYR TYR ARG SER TRP SER PRO VAL TYR SEQRES 12 A 362 PRO ALA GLY THR HIS ARG GLN TYR SER ASN PRO SER ILE SEQRES 13 A 362 GLY LEU PHE GLY HIS LEU ALA ALA ASN SER LEU GLY GLN SEQRES 14 A 362 PRO PHE GLU GLN LEU MET SER GLN THR LEU LEU PRO LYS SEQRES 15 A 362 LEU GLY LEU HIS HIS THR TYR ILE GLN VAL PRO GLU SER SEQRES 16 A 362 ALA MET ALA ASN TYR ALA TYR GLY TYR SER LYS GLU ASP SEQRES 17 A 362 LYS PRO ILE ARG ALA THR PRO GLY VAL LEU ALA ALA GLU SEQRES 18 A 362 ALA TYR GLY ILE LYS THR GLY SER ALA ASP LEU LEU LYS SEQRES 19 A 362 PHE VAL GLU ALA ASN MET GLY TYR GLN GLY ASP ALA ALA SEQRES 20 A 362 LEU LYS SER ALA ILE ALA LEU THR HIS THR GLY PHE HIS SEQRES 21 A 362 SER VAL GLY GLU MET THR GLN GLY LEU GLY TRP GLU SER SEQRES 22 A 362 TYR ASP TYR PRO VAL THR GLU GLN VAL LEU LEU ALA GLY SEQRES 23 A 362 ASN SER PRO ALA VAL SER PHE GLN ALA ASN PRO VAL THR SEQRES 24 A 362 ARG PHE ALA VAL PRO LYS ALA MET GLY GLU GLN ARG LEU SEQRES 25 A 362 TYR ASN LYS THR GLY SER THR GLY GLY PHE GLY ALA TYR SEQRES 26 A 362 VAL ALA PHE VAL PRO ALA ARG GLY ILE ALA ILE VAL MET SEQRES 27 A 362 LEU ALA ASN ARG ASN TYR PRO ILE GLU ALA ARG VAL LYS SEQRES 28 A 362 ALA ALA HIS ALA ILE LEU SER GLN LEU ALA GLU HET CB4 A 400 15 HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HET ZN A 405 1 HET NA A 406 1 HET ACT A 407 4 HETNAM CB4 PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)- HETNAM 2 CB4 4-THIAZOLEACETYL]AMINO]METHANEBORONATE HETNAM ZN ZINC ION HETNAM NA SODIUM ION HETNAM ACT ACETATE ION FORMUL 2 CB4 C10 H15 B N4 O6 S FORMUL 3 ZN 5(ZN 2+) FORMUL 8 NA NA 1+ FORMUL 9 ACT C2 H3 O2 1- FORMUL 10 HOH *230(H2 O) HELIX 1 AA1 PRO A 7 TYR A 23 1 17 HELIX 2 AA2 VAL A 65 LYS A 80 1 16 HELIX 3 AA3 LYS A 88 LYS A 97 5 10 HELIX 4 AA4 SER A 99 VAL A 104 5 6 HELIX 5 AA5 THR A 105 THR A 111 1 7 HELIX 6 AA6 SER A 127 SER A 137 1 11 HELIX 7 AA7 SER A 151 LEU A 166 1 16 HELIX 8 AA8 PRO A 169 THR A 177 1 9 HELIX 9 AA9 THR A 177 LEU A 182 1 6 HELIX 10 AB1 PRO A 192 TYR A 199 5 8 HELIX 11 AB2 LEU A 217 GLY A 223 1 7 HELIX 12 AB3 GLY A 227 GLY A 240 1 14 HELIX 13 AB4 ASP A 244 HIS A 255 1 12 HELIX 14 AB5 THR A 278 ASN A 286 1 9 HELIX 15 AB6 SER A 287 PHE A 292 1 6 HELIX 16 AB7 PRO A 329 GLY A 332 5 4 HELIX 17 AB8 PRO A 344 GLU A 361 1 18 SHEET 1 AA1 9 LYS A 37 GLY A 44 0 SHEET 2 AA1 9 GLY A 27 LYS A 34 -1 N VAL A 30 O PHE A 41 SHEET 3 AA1 9 ILE A 333 ALA A 339 -1 O VAL A 336 N ALA A 31 SHEET 4 AA1 9 GLY A 322 VAL A 328 -1 N ALA A 326 O ILE A 335 SHEET 5 AA1 9 ARG A 310 SER A 317 -1 N GLY A 316 O ALA A 323 SHEET 6 AA1 9 GLU A 271 ASP A 274 -1 N GLU A 271 O ASN A 313 SHEET 7 AA1 9 MET A 264 GLN A 266 -1 N THR A 265 O SER A 272 SHEET 8 AA1 9 THR A 256 VAL A 261 -1 N PHE A 258 O GLN A 266 SHEET 9 AA1 9 THR A 298 ALA A 305 -1 O LYS A 304 N GLY A 257 SHEET 1 AA2 3 PHE A 60 GLU A 61 0 SHEET 2 AA2 3 LYS A 225 THR A 226 -1 O THR A 226 N PHE A 60 SHEET 3 AA2 3 THR A 187 TYR A 188 -1 N TYR A 188 O LYS A 225 SHEET 1 AA3 2 HIS A 147 ARG A 148 0 SHEET 2 AA3 2 ASN A 295 PRO A 296 -1 O ASN A 295 N ARG A 148 SHEET 1 AA4 2 GLY A 202 TYR A 203 0 SHEET 2 AA4 2 PRO A 209 ILE A 210 -1 O ILE A 210 N GLY A 202 LINK OG SER A 64 B CB4 A 400 1555 1555 1.47 LINK ND1 HIS A 39 ZN ZN A 402 1555 1555 2.07 LINK OE1 GLU A 84 ZN ZN A 404 1555 2756 2.39 LINK OE1 GLU A 124 ZN ZN A 403 1555 1555 2.02 LINK OD2 ASP A 126 ZN ZN A 403 1555 1555 2.07 LINK NE2 HIS A 147 ZN ZN A 403 1555 2856 2.06 LINK NE2 HIS A 160 ZN ZN A 401 1555 1555 2.08 LINK ND1 HIS A 185 ZN ZN A 404 1555 1555 2.41 LINK ND1 HIS A 255 ZN ZN A 405 1555 1555 2.19 LINK OD1 ASP A 274 ZN ZN A 402 1555 2755 2.50 LINK OD2 ASP A 274 ZN ZN A 402 1555 2755 2.15 LINK OE2 GLU A 361 NA NA A 406 1555 1555 2.24 LINK ZN ZN A 401 O HOH A 569 1555 1555 2.40 LINK ZN ZN A 402 O HOH A 520 1555 2745 2.21 LINK ZN ZN A 402 O HOH A 678 1555 2745 2.14 LINK ZN ZN A 403 OXT ACT A 407 1555 1555 2.24 LINK ZN ZN A 405 O HOH A 681 1555 1555 2.69 LINK NA NA A 406 O HOH A 604 1555 1555 2.21 CISPEP 1 TYR A 275 PRO A 276 0 0.18 SITE 1 AC1 11 SER A 64 LYS A 67 GLN A 120 TYR A 150 SITE 2 AC1 11 ASN A 152 TYR A 222 SER A 317 GLY A 319 SITE 3 AC1 11 HOH A 567 HOH A 656 HOH A 657 SITE 1 AC2 3 HIS A 160 HOH A 569 HOH A 671 SITE 1 AC3 1 HIS A 39 SITE 1 AC4 3 GLU A 124 ASP A 126 ACT A 407 SITE 1 AC5 1 HIS A 185 SITE 1 AC6 3 HIS A 255 HOH A 524 HOH A 681 SITE 1 AC7 2 GLU A 361 HOH A 604 SITE 1 AC8 4 GLU A 124 ASP A 126 LYS A 130 ZN A 403 CRYST1 54.803 57.144 56.123 90.00 95.98 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018247 0.000000 0.001913 0.00000 SCALE2 0.000000 0.017500 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017916 0.00000