HEADER ELECTRON TRANSPORT/OXIDOREDUCTASE 12-JUL-15 5CIH TITLE COMPLEX OF YEAST CYTOCHROME C PEROXIDASE (W191Y) WITH ISO-1 CYTOCHROME TITLE 2 C COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C PEROXIDASE, MITOCHONDRIAL; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 68-361; COMPND 5 SYNONYM: CCP; COMPND 6 EC: 1.11.1.5; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CYTOCHROME C ISO-1; COMPND 11 CHAIN: B, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: CCP1, CCP, CPO, YKR066C; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PPSUMO; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 15 S288C); SOURCE 16 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 17 ORGANISM_TAXID: 559292; SOURCE 18 STRAIN: ATCC 204508 / S288C; SOURCE 19 GENE: CYC1, YJR048W, J1653; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PBTR-1 KEYWDS ELECTRON TRANSFER, HEME PROTEINS, ELECTRON HOPPING, MULTI-STEP KEYWDS 2 TUNNELING, PHOTOCHEMISTRY, ELECTRON TRANSPORT-OXIDOREDUCTASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.R.CRANE,T.M.PAYNE REVDAT 5 10-MAR-21 5CIH 1 COMPND REMARK SEQADV HET REVDAT 5 2 1 HETNAM HETSYN FORMUL LINK REVDAT 5 3 1 ATOM REVDAT 4 19-JUL-17 5CIH 1 TITLE JRNL REMARK REVDAT 3 14-SEP-16 5CIH 1 JRNL REVDAT 2 07-SEP-16 5CIH 1 JRNL REVDAT 1 03-AUG-16 5CIH 0 JRNL AUTH T.M.PAYNE,E.F.YEE,B.DZIKOVSKI,B.R.CRANE JRNL TITL CONSTRAINTS ON THE RADICAL CATION CENTER OF CYTOCHROME C JRNL TITL 2 PEROXIDASE FOR ELECTRON TRANSFER FROM CYTOCHROME C. JRNL REF BIOCHEMISTRY V. 55 4807 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27499202 JRNL DOI 10.1021/ACS.BIOCHEM.6B00262 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.1 REMARK 3 NUMBER OF REFLECTIONS : 21533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1498 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3620 - 5.7748 0.99 2291 169 0.1805 0.2502 REMARK 3 2 5.7748 - 4.5868 0.95 2181 165 0.1979 0.2783 REMARK 3 3 4.5868 - 4.0079 0.92 2117 151 0.1862 0.2877 REMARK 3 4 4.0079 - 3.6419 0.97 2200 164 0.2209 0.2988 REMARK 3 5 3.6419 - 3.3810 0.92 2089 154 0.2360 0.3225 REMARK 3 6 3.3810 - 3.1818 0.87 1964 150 0.2776 0.3549 REMARK 3 7 3.1818 - 3.0226 0.81 1806 139 0.2976 0.3903 REMARK 3 8 3.0226 - 2.8911 0.73 1662 125 0.3089 0.3912 REMARK 3 9 2.8911 - 2.7798 0.62 1401 110 0.3059 0.3981 REMARK 3 10 2.7798 - 2.6839 0.55 1228 90 0.3003 0.3792 REMARK 3 11 2.6839 - 2.6000 0.48 1096 81 0.2880 0.4395 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6724 REMARK 3 ANGLE : 0.713 9126 REMARK 3 CHIRALITY : 0.024 892 REMARK 3 PLANARITY : 0.003 1182 REMARK 3 DIHEDRAL : 13.306 2446 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1825 21.7259 -4.1854 REMARK 3 T TENSOR REMARK 3 T11: 0.1873 T22: 0.3402 REMARK 3 T33: 0.2342 T12: -0.0561 REMARK 3 T13: 0.0193 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 3.5850 L22: 2.0922 REMARK 3 L33: 3.4451 L12: -0.4361 REMARK 3 L13: 0.6148 L23: 0.1684 REMARK 3 S TENSOR REMARK 3 S11: 0.0931 S12: 0.0609 S13: -0.1408 REMARK 3 S21: -0.0361 S22: 0.0038 S23: 0.0727 REMARK 3 S31: 0.1491 S32: -0.0807 S33: -0.0677 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1317 41.8846 -19.0573 REMARK 3 T TENSOR REMARK 3 T11: 0.6971 T22: 0.6274 REMARK 3 T33: 0.5858 T12: -0.0809 REMARK 3 T13: -0.1088 T23: 0.2071 REMARK 3 L TENSOR REMARK 3 L11: 4.8737 L22: 2.7001 REMARK 3 L33: 3.2076 L12: -0.1275 REMARK 3 L13: 1.9791 L23: 2.4149 REMARK 3 S TENSOR REMARK 3 S11: -0.1200 S12: -0.1681 S13: 0.5234 REMARK 3 S21: -0.5713 S22: 0.0655 S23: 0.4477 REMARK 3 S31: -0.8952 S32: -0.2119 S33: 0.1513 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3482 51.7652 -22.5812 REMARK 3 T TENSOR REMARK 3 T11: 1.1524 T22: 0.7812 REMARK 3 T33: 1.5075 T12: -0.3142 REMARK 3 T13: -0.0628 T23: 0.1821 REMARK 3 L TENSOR REMARK 3 L11: 0.8235 L22: 1.3298 REMARK 3 L33: 2.3932 L12: 0.0636 REMARK 3 L13: -0.6244 L23: -0.5807 REMARK 3 S TENSOR REMARK 3 S11: 0.2703 S12: 0.3409 S13: 0.8212 REMARK 3 S21: 0.3265 S22: 0.0807 S23: 0.4929 REMARK 3 S31: -0.2036 S32: -0.3135 S33: -0.3300 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6757 38.3503 -26.2847 REMARK 3 T TENSOR REMARK 3 T11: 0.6311 T22: 0.7687 REMARK 3 T33: 0.5418 T12: -0.1510 REMARK 3 T13: -0.1185 T23: 0.2430 REMARK 3 L TENSOR REMARK 3 L11: 3.9873 L22: 3.5116 REMARK 3 L33: 3.7361 L12: 0.6577 REMARK 3 L13: 1.1496 L23: -0.4259 REMARK 3 S TENSOR REMARK 3 S11: -0.0779 S12: 0.7338 S13: 0.4174 REMARK 3 S21: -0.9652 S22: 0.0444 S23: 0.6057 REMARK 3 S31: 0.1653 S32: -0.2429 S33: 0.0189 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6622 22.0025 -52.9770 REMARK 3 T TENSOR REMARK 3 T11: 0.2506 T22: 0.3931 REMARK 3 T33: 0.2295 T12: 0.0829 REMARK 3 T13: 0.0101 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 3.4137 L22: 1.5552 REMARK 3 L33: 3.7521 L12: 1.0624 REMARK 3 L13: 0.8046 L23: 1.0650 REMARK 3 S TENSOR REMARK 3 S11: 0.1072 S12: 0.0018 S13: -0.0158 REMARK 3 S21: 0.0466 S22: 0.0617 S23: -0.0586 REMARK 3 S31: 0.1423 S32: 0.4349 S33: -0.1354 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.7233 10.2378 -35.5124 REMARK 3 T TENSOR REMARK 3 T11: 0.5139 T22: 1.3582 REMARK 3 T33: 0.4910 T12: 0.1128 REMARK 3 T13: -0.0266 T23: -0.1574 REMARK 3 L TENSOR REMARK 3 L11: 1.9716 L22: 3.6128 REMARK 3 L33: 1.3805 L12: -1.0195 REMARK 3 L13: 1.0203 L23: 1.1015 REMARK 3 S TENSOR REMARK 3 S11: -0.1399 S12: -0.0143 S13: -0.1223 REMARK 3 S21: 0.1884 S22: -0.0563 S23: 0.6710 REMARK 3 S31: 0.3229 S32: 0.2039 S33: 0.1171 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 14 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1468 -2.4160 -43.2787 REMARK 3 T TENSOR REMARK 3 T11: 1.1421 T22: 0.7405 REMARK 3 T33: 0.8847 T12: -0.3368 REMARK 3 T13: -0.1455 T23: 0.0961 REMARK 3 L TENSOR REMARK 3 L11: 2.2909 L22: 1.9374 REMARK 3 L33: 1.8482 L12: -0.7705 REMARK 3 L13: -0.0568 L23: -0.4491 REMARK 3 S TENSOR REMARK 3 S11: -0.4519 S12: -0.1643 S13: -0.9701 REMARK 3 S21: 0.2873 S22: -0.2602 S23: 0.9109 REMARK 3 S31: 0.6374 S32: -0.4428 S33: 0.6450 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 34 THROUGH 103) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1012 -0.6047 -33.1312 REMARK 3 T TENSOR REMARK 3 T11: 0.9976 T22: 1.0774 REMARK 3 T33: 0.7236 T12: -0.0267 REMARK 3 T13: -0.1027 T23: 0.1603 REMARK 3 L TENSOR REMARK 3 L11: 2.5538 L22: 2.4116 REMARK 3 L33: 1.9064 L12: 0.5268 REMARK 3 L13: -0.3587 L23: 0.3649 REMARK 3 S TENSOR REMARK 3 S11: 0.5412 S12: -0.8509 S13: -0.7793 REMARK 3 S21: 0.3335 S22: -0.3383 S23: 0.2563 REMARK 3 S31: 0.2480 S32: -0.2804 S33: -0.1952 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211672. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8-5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28703 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 76.2 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 13.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.56600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 15-15%, 100 MM NAACETATE, 175 REMARK 280 MM NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.10950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS D 14 CBB HEC D 201 1.64 REMARK 500 SG CYS B 14 CBB HEC B 201 1.96 REMARK 500 N THR B 96 O HOH B 301 2.08 REMARK 500 OD2 ASP C 132 O HOH C 401 2.09 REMARK 500 O LEU A 30 O HOH A 401 2.10 REMARK 500 NZ LYS A 183 O HOH A 402 2.13 REMARK 500 O ASP A 254 O HOH A 403 2.14 REMARK 500 N LEU C 28 O HOH C 402 2.15 REMARK 500 OE1 GLN D 16 O HOH D 301 2.16 REMARK 500 OE1 GLU A 188 O HOH A 404 2.17 REMARK 500 O HOH D 302 O HOH D 306 2.17 REMARK 500 O ASP A 140 O HOH A 405 2.17 REMARK 500 O ASN C 24 O HOH C 402 2.17 REMARK 500 O LYS D 11 O HOH D 301 2.18 REMARK 500 OD2 ASP C 79 OG SER C 81 2.19 REMARK 500 O ASP A 33 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 76.87 50.19 REMARK 500 PRO A 134 178.53 -55.16 REMARK 500 ASN A 184 -59.34 -125.87 REMARK 500 ASN A 219 -3.78 69.20 REMARK 500 CYS B 14 -50.26 -129.76 REMARK 500 LYS B 27 -78.99 -76.27 REMARK 500 HIS B 39 -81.54 -166.64 REMARK 500 LYS B 55 78.19 56.79 REMARK 500 ASN C 184 -69.60 -101.99 REMARK 500 TYR C 191 -70.76 -77.01 REMARK 500 SER C 225 -159.20 -151.36 REMARK 500 CYS D 14 -55.27 -129.93 REMARK 500 LYS D 27 -82.96 -96.79 REMARK 500 SER D 40 -61.13 -155.83 REMARK 500 GLN D 42 158.38 178.34 REMARK 500 ALA D 43 -90.98 -97.43 REMARK 500 ASN D 70 124.54 -171.61 REMARK 500 TYR D 74 -66.53 -91.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 175 NE2 REMARK 620 2 HEC A 301 NA 90.4 REMARK 620 3 HEC A 301 NB 86.2 90.5 REMARK 620 4 HEC A 301 NC 83.7 173.8 87.3 REMARK 620 5 HEC A 301 ND 93.1 90.5 178.7 91.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 18 NE2 REMARK 620 2 HEC B 201 NA 82.7 REMARK 620 3 HEC B 201 NB 97.2 89.8 REMARK 620 4 HEC B 201 NC 94.2 176.4 88.7 REMARK 620 5 HEC B 201 ND 80.8 90.3 178.0 91.1 REMARK 620 6 MET B 80 SD 158.1 80.1 96.1 103.3 85.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 175 NE2 REMARK 620 2 HEC C 301 NA 98.4 REMARK 620 3 HEC C 301 NB 94.3 91.5 REMARK 620 4 HEC C 301 NC 85.3 176.3 87.8 REMARK 620 5 HEC C 301 ND 94.5 89.6 170.8 90.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 18 NE2 REMARK 620 2 HEC D 201 NA 76.2 REMARK 620 3 HEC D 201 NB 91.2 90.0 REMARK 620 4 HEC D 201 NC 98.6 174.5 88.2 REMARK 620 5 HEC D 201 ND 83.1 90.6 174.0 90.7 REMARK 620 6 MET D 80 SD 151.6 99.1 117.0 86.4 68.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CIB RELATED DB: PDB REMARK 900 RELATED ID: 5CIC RELATED DB: PDB REMARK 900 RELATED ID: 5CIE RELATED DB: PDB REMARK 900 RELATED ID: 5CIF RELATED DB: PDB REMARK 900 RELATED ID: 5CIG RELATED DB: PDB REMARK 900 RELATED ID: 5CID RELATED DB: PDB DBREF 5CIH A 1 294 UNP P00431 CCPR_YEAST 68 361 DBREF 5CIH B 1 103 UNP P00044 CYC1_YEAST 7 109 DBREF 5CIH C 1 294 UNP P00431 CCPR_YEAST 68 361 DBREF 5CIH D 1 103 UNP P00044 CYC1_YEAST 7 109 SEQADV 5CIH ILE A 53 UNP P00431 THR 120 ENGINEERED MUTATION SEQADV 5CIH GLY A 152 UNP P00431 ASP 219 ENGINEERED MUTATION SEQADV 5CIH TYR A 191 UNP P00431 TRP 258 ENGINEERED MUTATION SEQADV 5CIH ILE C 53 UNP P00431 THR 120 ENGINEERED MUTATION SEQADV 5CIH GLY C 152 UNP P00431 ASP 219 ENGINEERED MUTATION SEQADV 5CIH TYR C 191 UNP P00431 TRP 258 ENGINEERED MUTATION SEQRES 1 A 294 THR THR PRO LEU VAL HIS VAL ALA SER VAL GLU LYS GLY SEQRES 2 A 294 ARG SER TYR GLU ASP PHE GLN LYS VAL TYR ASN ALA ILE SEQRES 3 A 294 ALA LEU LYS LEU ARG GLU ASP ASP GLU TYR ASP ASN TYR SEQRES 4 A 294 ILE GLY TYR GLY PRO VAL LEU VAL ARG LEU ALA TRP HIS SEQRES 5 A 294 ILE SER GLY THR TRP ASP LYS HIS ASP ASN THR GLY GLY SEQRES 6 A 294 SER TYR GLY GLY THR TYR ARG PHE LYS LYS GLU PHE ASN SEQRES 7 A 294 ASP PRO SER ASN ALA GLY LEU GLN ASN GLY PHE LYS PHE SEQRES 8 A 294 LEU GLU PRO ILE HIS LYS GLU PHE PRO TRP ILE SER SER SEQRES 9 A 294 GLY ASP LEU PHE SER LEU GLY GLY VAL THR ALA VAL GLN SEQRES 10 A 294 GLU MET GLN GLY PRO LYS ILE PRO TRP ARG CYS GLY ARG SEQRES 11 A 294 VAL ASP THR PRO GLU ASP THR THR PRO ASP ASN GLY ARG SEQRES 12 A 294 LEU PRO ASP ALA ASP LYS ASP ALA GLY TYR VAL ARG THR SEQRES 13 A 294 PHE PHE GLN ARG LEU ASN MET ASN ASP ARG GLU VAL VAL SEQRES 14 A 294 ALA LEU MET GLY ALA HIS ALA LEU GLY LYS THR HIS LEU SEQRES 15 A 294 LYS ASN SER GLY TYR GLU GLY PRO TYR GLY ALA ALA ASN SEQRES 16 A 294 ASN VAL PHE THR ASN GLU PHE TYR LEU ASN LEU LEU ASN SEQRES 17 A 294 GLU ASP TRP LYS LEU GLU LYS ASN ASP ALA ASN ASN GLU SEQRES 18 A 294 GLN TRP ASP SER LYS SER GLY TYR MET MET LEU PRO THR SEQRES 19 A 294 ASP TYR SER LEU ILE GLN ASP PRO LYS TYR LEU SER ILE SEQRES 20 A 294 VAL LYS GLU TYR ALA ASN ASP GLN ASP LYS PHE PHE LYS SEQRES 21 A 294 ASP PHE SER LYS ALA PHE GLU LYS LEU LEU GLU ASN GLY SEQRES 22 A 294 ILE THR PHE PRO LYS ASP ALA PRO SER PRO PHE ILE PHE SEQRES 23 A 294 LYS THR LEU GLU GLU GLN GLY LEU SEQRES 1 B 103 GLY SER ALA LYS LYS GLY ALA THR LEU PHE LYS THR ARG SEQRES 2 B 103 CYS LEU GLN CYS HIS THR VAL GLU LYS GLY GLY PRO HIS SEQRES 3 B 103 LYS VAL GLY PRO ASN LEU HIS GLY ILE PHE GLY ARG HIS SEQRES 4 B 103 SER GLY GLN ALA GLU GLY TYR SER TYR THR ASP ALA ASN SEQRES 5 B 103 ILE LYS LYS ASN VAL LEU TRP ASP GLU ASN ASN MET SER SEQRES 6 B 103 GLU TYR LEU THR ASN PRO LYS LYS TYR ILE PRO GLY THR SEQRES 7 B 103 LYS MET ALA PHE GLY GLY LEU LYS LYS GLU LYS ASP ARG SEQRES 8 B 103 ASN ASP LEU ILE THR TYR LEU LYS LYS ALA CYS GLU SEQRES 1 C 294 THR THR PRO LEU VAL HIS VAL ALA SER VAL GLU LYS GLY SEQRES 2 C 294 ARG SER TYR GLU ASP PHE GLN LYS VAL TYR ASN ALA ILE SEQRES 3 C 294 ALA LEU LYS LEU ARG GLU ASP ASP GLU TYR ASP ASN TYR SEQRES 4 C 294 ILE GLY TYR GLY PRO VAL LEU VAL ARG LEU ALA TRP HIS SEQRES 5 C 294 ILE SER GLY THR TRP ASP LYS HIS ASP ASN THR GLY GLY SEQRES 6 C 294 SER TYR GLY GLY THR TYR ARG PHE LYS LYS GLU PHE ASN SEQRES 7 C 294 ASP PRO SER ASN ALA GLY LEU GLN ASN GLY PHE LYS PHE SEQRES 8 C 294 LEU GLU PRO ILE HIS LYS GLU PHE PRO TRP ILE SER SER SEQRES 9 C 294 GLY ASP LEU PHE SER LEU GLY GLY VAL THR ALA VAL GLN SEQRES 10 C 294 GLU MET GLN GLY PRO LYS ILE PRO TRP ARG CYS GLY ARG SEQRES 11 C 294 VAL ASP THR PRO GLU ASP THR THR PRO ASP ASN GLY ARG SEQRES 12 C 294 LEU PRO ASP ALA ASP LYS ASP ALA GLY TYR VAL ARG THR SEQRES 13 C 294 PHE PHE GLN ARG LEU ASN MET ASN ASP ARG GLU VAL VAL SEQRES 14 C 294 ALA LEU MET GLY ALA HIS ALA LEU GLY LYS THR HIS LEU SEQRES 15 C 294 LYS ASN SER GLY TYR GLU GLY PRO TYR GLY ALA ALA ASN SEQRES 16 C 294 ASN VAL PHE THR ASN GLU PHE TYR LEU ASN LEU LEU ASN SEQRES 17 C 294 GLU ASP TRP LYS LEU GLU LYS ASN ASP ALA ASN ASN GLU SEQRES 18 C 294 GLN TRP ASP SER LYS SER GLY TYR MET MET LEU PRO THR SEQRES 19 C 294 ASP TYR SER LEU ILE GLN ASP PRO LYS TYR LEU SER ILE SEQRES 20 C 294 VAL LYS GLU TYR ALA ASN ASP GLN ASP LYS PHE PHE LYS SEQRES 21 C 294 ASP PHE SER LYS ALA PHE GLU LYS LEU LEU GLU ASN GLY SEQRES 22 C 294 ILE THR PHE PRO LYS ASP ALA PRO SER PRO PHE ILE PHE SEQRES 23 C 294 LYS THR LEU GLU GLU GLN GLY LEU SEQRES 1 D 103 GLY SER ALA LYS LYS GLY ALA THR LEU PHE LYS THR ARG SEQRES 2 D 103 CYS LEU GLN CYS HIS THR VAL GLU LYS GLY GLY PRO HIS SEQRES 3 D 103 LYS VAL GLY PRO ASN LEU HIS GLY ILE PHE GLY ARG HIS SEQRES 4 D 103 SER GLY GLN ALA GLU GLY TYR SER TYR THR ASP ALA ASN SEQRES 5 D 103 ILE LYS LYS ASN VAL LEU TRP ASP GLU ASN ASN MET SER SEQRES 6 D 103 GLU TYR LEU THR ASN PRO LYS LYS TYR ILE PRO GLY THR SEQRES 7 D 103 LYS MET ALA PHE GLY GLY LEU LYS LYS GLU LYS ASP ARG SEQRES 8 D 103 ASN ASP LEU ILE THR TYR LEU LYS LYS ALA CYS GLU HET HEC A 301 43 HET HEC B 201 43 HET HEC C 301 43 HET HEC D 201 43 HETNAM HEC HEME C FORMUL 5 HEC 4(C34 H34 FE N4 O4) FORMUL 9 HOH *40(H2 O) HELIX 1 AA1 SER A 15 ASP A 33 1 19 HELIX 2 AA2 TYR A 42 GLY A 55 1 14 HELIX 3 AA3 LEU A 85 LYS A 97 1 13 HELIX 4 AA4 SER A 103 MET A 119 1 17 HELIX 5 AA5 PRO A 134 THR A 138 5 5 HELIX 6 AA6 ASP A 150 PHE A 158 1 9 HELIX 7 AA7 ASN A 164 MET A 172 1 9 HELIX 8 AA8 GLY A 173 LEU A 177 5 5 HELIX 9 AA9 ASN A 200 ASN A 208 1 9 HELIX 10 AB1 LEU A 232 SER A 237 1 6 HELIX 11 AB2 ASP A 241 ASP A 254 1 14 HELIX 12 AB3 GLN A 255 GLU A 271 1 17 HELIX 13 AB4 LYS B 5 CYS B 14 1 10 HELIX 14 AB5 ASP B 60 ASN B 70 1 11 HELIX 15 AB6 ASN B 70 ILE B 75 1 6 HELIX 16 AB7 GLU B 88 LYS B 100 1 13 HELIX 17 AB8 SER C 15 ASP C 33 1 19 HELIX 18 AB9 TYR C 42 GLY C 55 1 14 HELIX 19 AC1 GLY C 69 PHE C 73 5 5 HELIX 20 AC2 ASP C 79 ALA C 83 5 5 HELIX 21 AC3 LEU C 85 PHE C 99 1 15 HELIX 22 AC4 SER C 103 MET C 119 1 17 HELIX 23 AC5 PRO C 134 THR C 138 5 5 HELIX 24 AC6 ASP C 150 LEU C 161 1 12 HELIX 25 AC7 ASN C 164 MET C 172 1 9 HELIX 26 AC8 GLY C 173 LEU C 177 5 5 HELIX 27 AC9 HIS C 181 GLY C 186 1 6 HELIX 28 AD1 ASN C 200 GLU C 209 1 10 HELIX 29 AD2 LEU C 232 SER C 237 1 6 HELIX 30 AD3 ASP C 241 ASP C 254 1 14 HELIX 31 AD4 ASP C 254 GLU C 271 1 18 HELIX 32 AD5 LEU C 289 GLY C 293 5 5 HELIX 33 AD6 SER D 2 CYS D 14 1 13 HELIX 34 AD7 ASP D 60 THR D 69 1 10 HELIX 35 AD8 LYS D 87 ALA D 101 1 15 SHEET 1 AA1 2 HIS A 6 VAL A 7 0 SHEET 2 AA1 2 ILE A 274 THR A 275 1 O THR A 275 N HIS A 6 SHEET 1 AA2 2 LYS A 179 THR A 180 0 SHEET 2 AA2 2 GLY A 189 PRO A 190 -1 O GLY A 189 N THR A 180 SHEET 1 AA3 3 TRP A 211 LYS A 215 0 SHEET 2 AA3 3 GLU A 221 SER A 225 -1 O GLN A 222 N GLU A 214 SHEET 3 AA3 3 MET A 230 MET A 231 -1 O MET A 231 N TRP A 223 SHEET 1 AA4 2 LYS C 179 THR C 180 0 SHEET 2 AA4 2 GLY C 189 PRO C 190 -1 O GLY C 189 N THR C 180 SHEET 1 AA5 2 LYS C 212 LYS C 215 0 SHEET 2 AA5 2 GLU C 221 ASP C 224 -1 O GLN C 222 N GLU C 214 LINK SG CYS B 14 CAB HEC B 201 1555 1555 2.00 LINK SG CYS B 17 CAC HEC B 201 1555 1555 2.00 LINK SG CYS D 14 CAB HEC D 201 1555 1555 2.00 LINK SG CYS D 17 CAC HEC D 201 1555 1555 2.00 LINK NE2 HIS A 175 FE HEC A 301 1555 1555 2.04 LINK NE2 HIS B 18 FE HEC B 201 1555 1555 2.00 LINK SD MET B 80 FE HEC B 201 1555 1555 2.25 LINK NE2 HIS C 175 FE HEC C 301 1555 1555 2.04 LINK NE2 HIS D 18 FE HEC D 201 1555 1555 2.00 LINK SD MET D 80 FE HEC D 201 1555 1555 2.25 SITE 1 AC1 12 PRO A 44 ARG A 48 PRO A 145 ALA A 174 SITE 2 AC1 12 HIS A 175 LEU A 177 GLY A 178 LYS A 179 SITE 3 AC1 12 THR A 180 HIS A 181 SER A 185 TYR A 191 SITE 1 AC2 22 ALA A 193 ALA A 194 ARG B 13 CYS B 14 SITE 2 AC2 22 GLN B 16 CYS B 17 HIS B 18 VAL B 28 SITE 3 AC2 22 GLY B 29 PRO B 30 SER B 40 GLY B 41 SITE 4 AC2 22 GLN B 42 TYR B 46 TYR B 48 THR B 49 SITE 5 AC2 22 TYR B 67 LEU B 68 THR B 78 LYS B 79 SITE 6 AC2 22 MET B 80 LEU B 94 SITE 1 AC3 17 PRO C 44 VAL C 47 ARG C 48 TRP C 51 SITE 2 AC3 17 PRO C 145 ASP C 146 ALA C 174 HIS C 175 SITE 3 AC3 17 LEU C 177 GLY C 178 LYS C 179 THR C 180 SITE 4 AC3 17 HIS C 181 ASN C 184 SER C 185 TYR C 191 SITE 5 AC3 17 THR C 234 SITE 1 AC4 22 ALA C 193 ALA C 194 LEU D 9 PHE D 10 SITE 2 AC4 22 THR D 12 ARG D 13 LEU D 15 GLN D 16 SITE 3 AC4 22 CYS D 17 HIS D 18 VAL D 28 GLY D 29 SITE 4 AC4 22 PRO D 30 GLY D 41 TYR D 46 THR D 49 SITE 5 AC4 22 ASN D 52 TRP D 59 THR D 78 MET D 80 SITE 6 AC4 22 PHE D 82 HOH D 304 CRYST1 45.451 114.219 88.258 90.00 104.32 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022002 0.000000 0.005618 0.00000 SCALE2 0.000000 0.008755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011694 0.00000