data_5CIJ # _entry.id 5CIJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5CIJ WWPDB D_1000206130 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2015-09-30 _pdbx_database_PDB_obs_spr.pdb_id 5DSD _pdbx_database_PDB_obs_spr.replace_pdb_id 5CIJ _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Crystal structure of nucleoprotein from Ebola Zaire' 4QAZ unspecified PDB 'Crystal structure of nucleoprotein from Ebola Zaire' 4QB0 unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CIJ _pdbx_database_status.recvd_initial_deposition_date 2015-07-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Baker, L.' 1 'Handing, K.B.' 2 'Utepbergenov, D.' 3 'Derewenda, U.' 4 'Derewenda, Z.S.' 5 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? ? ? ? primary 'To be published' ? 0353 ? ? ? ? ? ? ? 'On the molecular architecture of the C-terminal domain from the nucleoprotein (NP) from the Ebola and Marburg viruses' ? ? ? ? ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 ? 1399-0047 ? ? 70 ? 2420 2429 'The structure of the C-terminal domain of the Zaire ebolavirus nucleoprotein.' 2014 ? 10.1107/S1399004714014710 25195755 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Baker, L.' 1 primary 'Ellena, J.F.' 2 primary 'Handing, K.B.' 3 primary 'Derewenda, U.' 4 primary 'Utepbergenov, D.' 5 primary 'Engel, D.A.' 6 primary 'Derewenda, Z.S.' 7 1 'Dziubanska, P.J.' 8 1 'Derewenda, U.' 9 1 'Ellena, J.F.' 10 1 'Engel, D.A.' 11 1 'Derewenda, Z.S.' 12 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 5CIJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 108.957 _cell.length_a_esd ? _cell.length_b 108.957 _cell.length_b_esd ? _cell.length_c 82.736 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CIJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Nucleoprotein 12210.675 1 ? ? 'residues 641-739' ? 2 water nat water 18.015 72 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AMANAQSEQSIAEMYQHILKTQGPFDAILYYHMMKEEPIIFSTSDGKEYTYPDSLEDEYPPWLSEKEAMNEDNRFITMDG QQFYWPVMNHRNKFMAILQHHR ; _entity_poly.pdbx_seq_one_letter_code_can ;AMANAQSEQSIAEMYQHILKTQGPFDAILYYHMMKEEPIIFSTSDGKEYTYPDSLEDEYPPWLSEKEAMNEDNRFITMDG QQFYWPVMNHRNKFMAILQHHR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 MET n 1 3 ALA n 1 4 ASN n 1 5 ALA n 1 6 GLN n 1 7 SER n 1 8 GLU n 1 9 GLN n 1 10 SER n 1 11 ILE n 1 12 ALA n 1 13 GLU n 1 14 MET n 1 15 TYR n 1 16 GLN n 1 17 HIS n 1 18 ILE n 1 19 LEU n 1 20 LYS n 1 21 THR n 1 22 GLN n 1 23 GLY n 1 24 PRO n 1 25 PHE n 1 26 ASP n 1 27 ALA n 1 28 ILE n 1 29 LEU n 1 30 TYR n 1 31 TYR n 1 32 HIS n 1 33 MET n 1 34 MET n 1 35 LYS n 1 36 GLU n 1 37 GLU n 1 38 PRO n 1 39 ILE n 1 40 ILE n 1 41 PHE n 1 42 SER n 1 43 THR n 1 44 SER n 1 45 ASP n 1 46 GLY n 1 47 LYS n 1 48 GLU n 1 49 TYR n 1 50 THR n 1 51 TYR n 1 52 PRO n 1 53 ASP n 1 54 SER n 1 55 LEU n 1 56 GLU n 1 57 ASP n 1 58 GLU n 1 59 TYR n 1 60 PRO n 1 61 PRO n 1 62 TRP n 1 63 LEU n 1 64 SER n 1 65 GLU n 1 66 LYS n 1 67 GLU n 1 68 ALA n 1 69 MET n 1 70 ASN n 1 71 GLU n 1 72 ASP n 1 73 ASN n 1 74 ARG n 1 75 PHE n 1 76 ILE n 1 77 THR n 1 78 MET n 1 79 ASP n 1 80 GLY n 1 81 GLN n 1 82 GLN n 1 83 PHE n 1 84 TYR n 1 85 TRP n 1 86 PRO n 1 87 VAL n 1 88 MET n 1 89 ASN n 1 90 HIS n 1 91 ARG n 1 92 ASN n 1 93 LYS n 1 94 PHE n 1 95 MET n 1 96 ALA n 1 97 ILE n 1 98 LEU n 1 99 GLN n 1 100 HIS n 1 101 HIS n 1 102 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 102 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP, DH33_45404gpNP' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bundibugyo virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 565995 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name Parallel1-MBPHis _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B8XCM7_9MONO _struct_ref.pdbx_db_accession B8XCM7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NAQSEQSIAEMYQHILKTQGPFDAILYYHMMKEEPIIFSTSDGKEYTYPDSLEDEYPPWLSEKEAMNEDNRFITMDGQQF YWPVMNHRNKFMAILQHHR ; _struct_ref.pdbx_align_begin 641 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5CIJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 102 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B8XCM7 _struct_ref_seq.db_align_beg 641 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 739 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 641 _struct_ref_seq.pdbx_auth_seq_align_end 739 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CIJ ALA A 1 ? UNP B8XCM7 ? ? 'expression tag' 638 1 1 5CIJ MET A 2 ? UNP B8XCM7 ? ? 'expression tag' 639 2 1 5CIJ ALA A 3 ? UNP B8XCM7 ? ? 'expression tag' 640 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CIJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 5.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Crystallization solution: 1.33 M LiSO4, 0.1 M Tris pH 8.5. 1:1 ratio (250 nL: 250 nL) of precipitant to protein (at a concentration of 13.9 mg/ml). 60 mcL reservoir. Protein purification buffer 50mM Tris-HCl, 150 mM NaCl; pH 7.5 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-08-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CIJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 80 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12398 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.8 _reflns.pdbx_Rmerge_I_obs 0.084 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 31.3 _reflns.pdbx_netI_over_sigmaI 20.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 64.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.432 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.1500 _refine.aniso_B[1][2] 0.5700 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 1.1500 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -3.7200 _refine.B_iso_max 134.250 _refine.B_iso_mean 71.7180 _refine.B_iso_min 44.960 _refine.correlation_coeff_Fo_to_Fc 0.9610 _refine.correlation_coeff_Fo_to_Fc_free 0.9540 _refine.details 'U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5CIJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.3100 _refine.ls_d_res_low 80.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11792 _refine.ls_number_reflns_R_free 604 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.0400 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1927 _refine.ls_R_factor_R_free 0.2217 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1913 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.2306 _refine.ls_wR_factor_R_work 0.1956 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4QB0 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1530 _refine.pdbx_overall_ESU_R_Free 0.1480 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.2600 _refine.overall_SU_ML 0.1220 _refine.overall_SU_R_Cruickshank_DPI 0.1532 _refine.overall_SU_R_free 0.1476 _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.8118 _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.3100 _refine_hist.d_res_low 80.00 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 909 _refine_hist.pdbx_number_residues_total 102 _refine_hist.pdbx_B_iso_mean_solvent 69.41 _refine_hist.pdbx_number_atoms_protein 837 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.019 863 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 751 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.269 1.922 1170 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.916 3.000 1733 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.627 5.000 101 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.446 25.106 47 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.789 15.000 139 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.836 15.000 2 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.074 0.200 116 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.021 992 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 212 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.318 4.155 407 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.319 4.150 406 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.232 6.222 507 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.3120 _refine_ls_shell.d_res_low 2.3720 _refine_ls_shell.number_reflns_all 561 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 27 _refine_ls_shell.number_reflns_R_work 534 _refine_ls_shell.percent_reflns_obs 59.4900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2280 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2920 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5CIJ _struct.title 'The crystal structure of the C-terminal domain of Ebola (Bundibugyo) nucleoprotein' _struct.pdbx_descriptor Nucleoprotein _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CIJ _struct_keywords.text 'viral protein, Filoviridae' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.details 'biological unit is the same as asym.' _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_aggregation_state ? _struct_biol.pdbx_assembly_method ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? GLN A 22 ? SER A 644 GLN A 659 1 ? 16 HELX_P HELX_P2 AA2 GLY A 23 ? GLU A 36 ? GLY A 660 GLU A 673 1 ? 14 HELX_P HELX_P3 AA3 PRO A 52 ? GLU A 56 ? PRO A 689 GLU A 693 5 ? 5 HELX_P HELX_P4 AA4 LYS A 66 ? ASN A 73 ? LYS A 703 ASN A 710 5 ? 8 HELX_P HELX_P5 AA5 PRO A 86 ? MET A 88 ? PRO A 723 MET A 725 5 ? 3 HELX_P HELX_P6 AA6 ASN A 89 ? HIS A 101 ? ASN A 726 HIS A 738 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 51 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 688 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 52 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 689 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 8.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 39 ? SER A 42 ? ILE A 676 SER A 679 AA1 2 GLU A 48 ? TYR A 51 ? GLU A 685 TYR A 688 AA2 1 PHE A 75 ? THR A 77 ? PHE A 712 THR A 714 AA2 2 GLN A 82 ? TYR A 84 ? GLN A 719 TYR A 721 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 39 ? N ILE A 676 O TYR A 51 ? O TYR A 688 AA2 1 2 N ILE A 76 ? N ILE A 713 O PHE A 83 ? O PHE A 720 # _atom_sites.entry_id 5CIJ _atom_sites.fract_transf_matrix[1][1] 0.009178 _atom_sites.fract_transf_matrix[1][2] 0.005299 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010598 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012087 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 638 638 ALA ALA A . n A 1 2 MET 2 639 639 MET MET A . n A 1 3 ALA 3 640 640 ALA ALA A . n A 1 4 ASN 4 641 641 ASN ASN A . n A 1 5 ALA 5 642 642 ALA ALA A . n A 1 6 GLN 6 643 643 GLN GLN A . n A 1 7 SER 7 644 644 SER SER A . n A 1 8 GLU 8 645 645 GLU GLU A . n A 1 9 GLN 9 646 646 GLN GLN A . n A 1 10 SER 10 647 647 SER SER A . n A 1 11 ILE 11 648 648 ILE ILE A . n A 1 12 ALA 12 649 649 ALA ALA A . n A 1 13 GLU 13 650 650 GLU GLU A . n A 1 14 MET 14 651 651 MET MET A . n A 1 15 TYR 15 652 652 TYR TYR A . n A 1 16 GLN 16 653 653 GLN GLN A . n A 1 17 HIS 17 654 654 HIS HIS A . n A 1 18 ILE 18 655 655 ILE ILE A . n A 1 19 LEU 19 656 656 LEU LEU A . n A 1 20 LYS 20 657 657 LYS LYS A . n A 1 21 THR 21 658 658 THR THR A . n A 1 22 GLN 22 659 659 GLN GLN A . n A 1 23 GLY 23 660 660 GLY GLY A . n A 1 24 PRO 24 661 661 PRO PRO A . n A 1 25 PHE 25 662 662 PHE PHE A . n A 1 26 ASP 26 663 663 ASP ASP A . n A 1 27 ALA 27 664 664 ALA ALA A . n A 1 28 ILE 28 665 665 ILE ILE A . n A 1 29 LEU 29 666 666 LEU LEU A . n A 1 30 TYR 30 667 667 TYR TYR A . n A 1 31 TYR 31 668 668 TYR TYR A . n A 1 32 HIS 32 669 669 HIS HIS A . n A 1 33 MET 33 670 670 MET MET A . n A 1 34 MET 34 671 671 MET MET A . n A 1 35 LYS 35 672 672 LYS LYS A . n A 1 36 GLU 36 673 673 GLU GLU A . n A 1 37 GLU 37 674 674 GLU GLU A . n A 1 38 PRO 38 675 675 PRO PRO A . n A 1 39 ILE 39 676 676 ILE ILE A . n A 1 40 ILE 40 677 677 ILE ILE A . n A 1 41 PHE 41 678 678 PHE PHE A . n A 1 42 SER 42 679 679 SER SER A . n A 1 43 THR 43 680 680 THR THR A . n A 1 44 SER 44 681 681 SER SER A . n A 1 45 ASP 45 682 682 ASP ASP A . n A 1 46 GLY 46 683 683 GLY GLY A . n A 1 47 LYS 47 684 684 LYS LYS A . n A 1 48 GLU 48 685 685 GLU GLU A . n A 1 49 TYR 49 686 686 TYR TYR A . n A 1 50 THR 50 687 687 THR THR A . n A 1 51 TYR 51 688 688 TYR TYR A . n A 1 52 PRO 52 689 689 PRO PRO A . n A 1 53 ASP 53 690 690 ASP ASP A . n A 1 54 SER 54 691 691 SER SER A . n A 1 55 LEU 55 692 692 LEU LEU A . n A 1 56 GLU 56 693 693 GLU GLU A . n A 1 57 ASP 57 694 694 ASP ASP A . n A 1 58 GLU 58 695 695 GLU GLU A . n A 1 59 TYR 59 696 696 TYR TYR A . n A 1 60 PRO 60 697 697 PRO PRO A . n A 1 61 PRO 61 698 698 PRO PRO A . n A 1 62 TRP 62 699 699 TRP TRP A . n A 1 63 LEU 63 700 700 LEU LEU A . n A 1 64 SER 64 701 701 SER SER A . n A 1 65 GLU 65 702 702 GLU GLU A . n A 1 66 LYS 66 703 703 LYS LYS A . n A 1 67 GLU 67 704 704 GLU GLU A . n A 1 68 ALA 68 705 705 ALA ALA A . n A 1 69 MET 69 706 706 MET MET A . n A 1 70 ASN 70 707 707 ASN ASN A . n A 1 71 GLU 71 708 708 GLU GLU A . n A 1 72 ASP 72 709 709 ASP ASP A . n A 1 73 ASN 73 710 710 ASN ASN A . n A 1 74 ARG 74 711 711 ARG ARG A . n A 1 75 PHE 75 712 712 PHE PHE A . n A 1 76 ILE 76 713 713 ILE ILE A . n A 1 77 THR 77 714 714 THR THR A . n A 1 78 MET 78 715 715 MET MET A . n A 1 79 ASP 79 716 716 ASP ASP A . n A 1 80 GLY 80 717 717 GLY GLY A . n A 1 81 GLN 81 718 718 GLN GLN A . n A 1 82 GLN 82 719 719 GLN GLN A . n A 1 83 PHE 83 720 720 PHE PHE A . n A 1 84 TYR 84 721 721 TYR TYR A . n A 1 85 TRP 85 722 722 TRP TRP A . n A 1 86 PRO 86 723 723 PRO PRO A . n A 1 87 VAL 87 724 724 VAL VAL A . n A 1 88 MET 88 725 725 MET MET A . n A 1 89 ASN 89 726 726 ASN ASN A . n A 1 90 HIS 90 727 727 HIS HIS A . n A 1 91 ARG 91 728 728 ARG ARG A . n A 1 92 ASN 92 729 729 ASN ASN A . n A 1 93 LYS 93 730 730 LYS LYS A . n A 1 94 PHE 94 731 731 PHE PHE A . n A 1 95 MET 95 732 732 MET MET A . n A 1 96 ALA 96 733 733 ALA ALA A . n A 1 97 ILE 97 734 734 ILE ILE A . n A 1 98 LEU 98 735 735 LEU LEU A . n A 1 99 GLN 99 736 736 GLN GLN A . n A 1 100 HIS 100 737 737 HIS HIS A . n A 1 101 HIS 101 738 738 HIS HIS A . n A 1 102 ARG 102 739 739 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 801 99 HOH HOH A . B 2 HOH 2 802 4 HOH HOH A . B 2 HOH 3 803 18 HOH HOH A . B 2 HOH 4 804 90 HOH HOH A . B 2 HOH 5 805 41 HOH HOH A . B 2 HOH 6 806 47 HOH HOH A . B 2 HOH 7 807 49 HOH HOH A . B 2 HOH 8 808 132 HOH HOH A . B 2 HOH 9 809 17 HOH HOH A . B 2 HOH 10 810 92 HOH HOH A . B 2 HOH 11 811 10 HOH HOH A . B 2 HOH 12 812 5 HOH HOH A . B 2 HOH 13 813 58 HOH HOH A . B 2 HOH 14 814 91 HOH HOH A . B 2 HOH 15 815 107 HOH HOH A . B 2 HOH 16 816 12 HOH HOH A . B 2 HOH 17 817 2 HOH HOH A . B 2 HOH 18 818 115 HOH HOH A . B 2 HOH 19 819 97 HOH HOH A . B 2 HOH 20 820 9 HOH HOH A . B 2 HOH 21 821 35 HOH HOH A . B 2 HOH 22 822 22 HOH HOH A . B 2 HOH 23 823 25 HOH HOH A . B 2 HOH 24 824 59 HOH HOH A . B 2 HOH 25 825 31 HOH HOH A . B 2 HOH 26 826 86 HOH HOH A . B 2 HOH 27 827 125 HOH HOH A . B 2 HOH 28 828 48 HOH HOH A . B 2 HOH 29 829 13 HOH HOH A . B 2 HOH 30 830 110 HOH HOH A . B 2 HOH 31 831 6 HOH HOH A . B 2 HOH 32 832 73 HOH HOH A . B 2 HOH 33 833 53 HOH HOH A . B 2 HOH 34 834 32 HOH HOH A . B 2 HOH 35 835 118 HOH HOH A . B 2 HOH 36 836 80 HOH HOH A . B 2 HOH 37 837 30 HOH HOH A . B 2 HOH 38 838 67 HOH HOH A . B 2 HOH 39 839 8 HOH HOH A . B 2 HOH 40 840 46 HOH HOH A . B 2 HOH 41 841 27 HOH HOH A . B 2 HOH 42 842 105 HOH HOH A . B 2 HOH 43 843 19 HOH HOH A . B 2 HOH 44 844 37 HOH HOH A . B 2 HOH 45 845 95 HOH HOH A . B 2 HOH 46 846 88 HOH HOH A . B 2 HOH 47 847 16 HOH HOH A . B 2 HOH 48 848 28 HOH HOH A . B 2 HOH 49 849 133 HOH HOH A . B 2 HOH 50 850 57 HOH HOH A . B 2 HOH 51 851 71 HOH HOH A . B 2 HOH 52 852 129 HOH HOH A . B 2 HOH 53 853 103 HOH HOH A . B 2 HOH 54 854 87 HOH HOH A . B 2 HOH 55 855 94 HOH HOH A . B 2 HOH 56 856 26 HOH HOH A . B 2 HOH 57 857 130 HOH HOH A . B 2 HOH 58 858 119 HOH HOH A . B 2 HOH 59 859 38 HOH HOH A . B 2 HOH 60 860 96 HOH HOH A . B 2 HOH 61 861 102 HOH HOH A . B 2 HOH 62 862 120 HOH HOH A . B 2 HOH 63 863 21 HOH HOH A . B 2 HOH 64 864 29 HOH HOH A . B 2 HOH 65 865 62 HOH HOH A . B 2 HOH 66 866 117 HOH HOH A . B 2 HOH 67 867 55 HOH HOH A . B 2 HOH 68 868 106 HOH HOH A . B 2 HOH 69 869 100 HOH HOH A . B 2 HOH 70 870 39 HOH HOH A . B 2 HOH 71 871 52 HOH HOH A . B 2 HOH 72 872 131 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 856 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-07-29 2 'Structure model' 1 1 2015-09-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -8.6520 66.0300 27.4230 0.4506 ? -0.0496 ? 0.0053 ? 0.4450 ? -0.0935 ? 0.1136 ? 6.2719 ? -6.2006 ? -1.8551 ? 16.7669 ? 2.1367 ? 9.4372 ? -0.1894 ? -0.1015 ? -0.2933 ? 0.8215 ? -0.1118 ? 1.1673 ? 1.1694 ? -1.4696 ? 0.3012 ? 2 'X-RAY DIFFRACTION' ? refined -4.8680 57.1170 13.5580 0.3259 ? -0.0098 ? -0.0035 ? 0.3702 ? -0.0404 ? 0.0788 ? 4.4008 ? -0.1136 ? 0.0131 ? 12.0413 ? 4.7873 ? 5.9022 ? -0.0295 ? 0.2083 ? -0.2628 ? -0.0976 ? -0.1787 ? 0.5977 ? -0.0220 ? -0.5618 ? 0.2082 ? 3 'X-RAY DIFFRACTION' ? refined 3.4450 55.9580 17.4600 0.3556 ? 0.0064 ? -0.0112 ? 0.3246 ? -0.0140 ? 0.0576 ? 4.2274 ? -1.3603 ? 0.4554 ? 7.2515 ? 1.4106 ? 6.3976 ? -0.1414 ? 0.0305 ? -0.4418 ? 0.0604 ? -0.0369 ? 0.0936 ? -0.1474 ? 0.0619 ? 0.1784 ? 4 'X-RAY DIFFRACTION' ? refined 5.8880 46.0570 24.5100 0.3554 ? 0.0312 ? 0.1157 ? 0.3756 ? 0.0239 ? 0.0875 ? 2.6736 ? -1.4034 ? -1.4507 ? 8.5246 ? 1.8174 ? 4.0494 ? -0.5251 ? -0.1211 ? -0.2846 ? 0.4063 ? 0.1270 ? 0.2028 ? 0.2855 ? -0.1287 ? 0.3980 ? 5 'X-RAY DIFFRACTION' ? refined 12.6620 31.1950 22.9920 0.4295 ? 0.0003 ? 0.1996 ? 0.3147 ? 0.0490 ? 0.4393 ? 8.6939 ? -3.1473 ? -8.2671 ? 6.7989 ? 1.1046 ? 11.9610 ? -0.6671 ? -0.4423 ? -0.8927 ? 0.5588 ? 0.3897 ? 0.0353 ? 0.9569 ? 0.1624 ? 0.2774 ? 6 'X-RAY DIFFRACTION' ? refined 8.4510 38.7780 14.9760 0.3335 ? -0.0182 ? 0.1276 ? 0.2972 ? -0.0737 ? 0.2127 ? 6.3422 ? -3.5748 ? -0.6065 ? 3.9484 ? 0.7690 ? 3.9116 ? -0.2097 ? 0.6130 ? -1.0536 ? -0.3533 ? -0.0846 ? 0.4901 ? 0.3439 ? -0.2733 ? 0.2942 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 638 ? ? A 645 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? A 646 ? ? A 661 ? ? 3 'X-RAY DIFFRACTION' 3 ? ? A 662 ? ? A 671 ? ? 4 'X-RAY DIFFRACTION' 4 ? ? A 672 ? ? A 698 ? ? 5 'X-RAY DIFFRACTION' 5 ? ? A 699 ? ? A 715 ? ? 6 'X-RAY DIFFRACTION' 6 ? ? A 716 ? ? A 739 ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 2 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? SBC-Collect ? ? ? . 3 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 6 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 7 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 8 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 9 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 872 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.87 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 684 ? CE ? A LYS 47 CE 2 1 Y 1 A LYS 684 ? NZ ? A LYS 47 NZ 3 1 Y 1 A GLU 702 ? CG ? A GLU 65 CG 4 1 Y 1 A GLU 702 ? CD ? A GLU 65 CD 5 1 Y 1 A GLU 702 ? OE1 ? A GLU 65 OE1 6 1 Y 1 A GLU 702 ? OE2 ? A GLU 65 OE2 7 1 Y 1 A LYS 703 ? CG ? A LYS 66 CG 8 1 Y 1 A LYS 703 ? CD ? A LYS 66 CD 9 1 Y 1 A LYS 703 ? CE ? A LYS 66 CE 10 1 Y 1 A LYS 703 ? NZ ? A LYS 66 NZ 11 1 Y 1 A MET 706 ? CE ? A MET 69 CE 12 1 Y 1 A ASP 716 ? CG ? A ASP 79 CG 13 1 Y 1 A ASP 716 ? OD1 ? A ASP 79 OD1 14 1 Y 1 A ASP 716 ? OD2 ? A ASP 79 OD2 15 1 Y 1 A ARG 739 ? CG ? A ARG 102 CG 16 1 Y 1 A ARG 739 ? CD ? A ARG 102 CD 17 1 Y 1 A ARG 739 ? NE ? A ARG 102 NE 18 1 Y 1 A ARG 739 ? CZ ? A ARG 102 CZ 19 1 Y 1 A ARG 739 ? NH1 ? A ARG 102 NH1 20 1 Y 1 A ARG 739 ? NH2 ? A ARG 102 NH2 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal DTRA 'United States' HDTRA1-14-C-0006 1 'University of Virginia Research and Development Committee' 'United States' ? 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #