HEADER HYDROLASE 15-JUL-15 5CKN TITLE THE CUB1-EGF-CUB2 DOMAINS OF RAT MBL-ASSOCIATED SERINE PROTEASE-2 TITLE 2 (MASP-2) BOUND TO CA2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANNAN-BINDING LECTIN SERINE PEPTIDASE 2; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: MANNAN-BINDING LECTIN SERINE PEPTIDASE 2,ISOFORM CRA_B, COMPND 5 MANNAN-BINDING LECTIN SERINE PROTEASE 2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: MASP2, RCG_31002; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: DXB11; SOURCE 10 EXPRESSION_SYSTEM_CELL: OVARY; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PED KEYWDS MASP, CUB1-EGF-CUB2, COMPLEMENT ACTIVATION, LECTIN PATHWAY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.NAN,C.M.FURZE,D.W.WRIGHT,J.GOR,R.WALLIS,S.J.PERKINS REVDAT 5 10-JAN-24 5CKN 1 LINK REVDAT 4 13-SEP-17 5CKN 1 REMARK REVDAT 3 15-FEB-17 5CKN 1 JRNL REVDAT 2 01-FEB-17 5CKN 1 JRNL REVDAT 1 18-JAN-17 5CKN 0 JRNL AUTH R.NAN,C.M.FURZE,D.W.WRIGHT,J.GOR,R.WALLIS,S.J.PERKINS JRNL TITL FLEXIBILITY IN MANNAN-BINDING LECTIN-ASSOCIATED SERINE JRNL TITL 2 PROTEASES-1 AND -2 PROVIDES INSIGHT ON LECTIN PATHWAY JRNL TITL 3 ACTIVATION. JRNL REF STRUCTURE V. 25 364 2017 JRNL REFN ISSN 1878-4186 JRNL PMID 28111019 JRNL DOI 10.1016/J.STR.2016.12.014 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 29879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1462 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.5640 - 5.6004 0.94 2910 158 0.1902 0.2271 REMARK 3 2 5.6004 - 4.4455 0.98 2905 139 0.1734 0.2153 REMARK 3 3 4.4455 - 3.8837 0.99 2895 156 0.1862 0.2426 REMARK 3 4 3.8837 - 3.5286 1.00 2891 137 0.2028 0.2336 REMARK 3 5 3.5286 - 3.2757 0.98 2848 156 0.2105 0.2972 REMARK 3 6 3.2757 - 3.0826 0.92 2650 146 0.2335 0.2834 REMARK 3 7 3.0826 - 2.9282 0.98 2837 133 0.2469 0.2885 REMARK 3 8 2.9282 - 2.8008 0.99 2835 148 0.2689 0.3390 REMARK 3 9 2.8008 - 2.6929 0.98 2799 140 0.2814 0.3293 REMARK 3 10 2.6929 - 2.6000 0.99 2847 149 0.3185 0.3196 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4586 REMARK 3 ANGLE : 0.962 6223 REMARK 3 CHIRALITY : 0.039 645 REMARK 3 PLANARITY : 0.004 815 REMARK 3 DIHEDRAL : 11.391 1643 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6982 -23.4060 1.6567 REMARK 3 T TENSOR REMARK 3 T11: 0.3779 T22: 0.3599 REMARK 3 T33: 0.4183 T12: -0.0449 REMARK 3 T13: 0.0218 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 4.0873 L22: 3.6741 REMARK 3 L33: 7.3715 L12: -2.5611 REMARK 3 L13: 2.9307 L23: -2.9136 REMARK 3 S TENSOR REMARK 3 S11: -0.0696 S12: -0.4571 S13: -0.0064 REMARK 3 S21: 0.2395 S22: 0.0787 S23: -0.2139 REMARK 3 S31: -0.0034 S32: 0.0449 S33: 0.0074 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6997 -15.9383 -20.1123 REMARK 3 T TENSOR REMARK 3 T11: 0.4882 T22: 0.4486 REMARK 3 T33: 0.5570 T12: 0.0579 REMARK 3 T13: 0.0671 T23: 0.0379 REMARK 3 L TENSOR REMARK 3 L11: 1.1701 L22: 2.7831 REMARK 3 L33: 4.1987 L12: -0.5535 REMARK 3 L13: 2.2222 L23: -1.1269 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: 0.1694 S13: 0.1858 REMARK 3 S21: -0.4345 S22: -0.1513 S23: -0.4890 REMARK 3 S31: 0.0946 S32: 1.0758 S33: 0.1584 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7456 -21.3335 -57.1417 REMARK 3 T TENSOR REMARK 3 T11: 1.6857 T22: 0.9343 REMARK 3 T33: 0.7158 T12: 0.2725 REMARK 3 T13: 0.2141 T23: 0.0844 REMARK 3 L TENSOR REMARK 3 L11: 2.8226 L22: 4.3130 REMARK 3 L33: 2.6161 L12: -0.5577 REMARK 3 L13: -0.4397 L23: 0.9811 REMARK 3 S TENSOR REMARK 3 S11: 0.4539 S12: 1.3285 S13: 0.1441 REMARK 3 S21: -2.0441 S22: -0.3869 S23: -0.7334 REMARK 3 S31: -0.5531 S32: -0.2371 S33: 0.0035 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0396 -42.6596 -30.0321 REMARK 3 T TENSOR REMARK 3 T11: 0.3029 T22: 0.3587 REMARK 3 T33: 0.5190 T12: -0.0261 REMARK 3 T13: 0.0260 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 1.5133 L22: 4.2885 REMARK 3 L33: 8.8339 L12: -0.2694 REMARK 3 L13: -1.2287 L23: 3.5061 REMARK 3 S TENSOR REMARK 3 S11: 0.2281 S12: -0.1451 S13: 0.3520 REMARK 3 S21: 0.1357 S22: -0.0182 S23: 0.1292 REMARK 3 S31: -0.4204 S32: -0.1219 S33: -0.1871 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 120 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8392 -41.7352 -85.1212 REMARK 3 T TENSOR REMARK 3 T11: 1.2683 T22: 1.2696 REMARK 3 T33: 0.7475 T12: -0.1733 REMARK 3 T13: 0.0552 T23: 0.2143 REMARK 3 L TENSOR REMARK 3 L11: 2.8592 L22: 3.0052 REMARK 3 L33: 7.1381 L12: -0.5396 REMARK 3 L13: 0.0864 L23: -4.1684 REMARK 3 S TENSOR REMARK 3 S11: -0.0344 S12: 1.2701 S13: 0.5365 REMARK 3 S21: -0.2017 S22: 0.4287 S23: 0.2815 REMARK 3 S31: -1.2179 S32: -0.9155 S33: -0.3723 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN D REMARK 3 ATOM PAIRS NUMBER : 2620 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CKN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29893 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 63.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 16.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32100 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1NTO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-AC PH 8 + 40% MPD AND 80 REMARK 280 MM SODIUM ACETATE, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.82000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.54500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.54500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.82000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG D 124 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 102 O HOH A 401 2.13 REMARK 500 OG SER D 13 O HOH D 401 2.14 REMARK 500 OH TYR A 115 O HOH A 402 2.17 REMARK 500 O GLY A 172 OH TYR A 274 2.18 REMARK 500 ND2 ASN A 84 O HOH A 403 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 55 -77.01 -81.67 REMARK 500 THR A 76 -164.85 -115.32 REMARK 500 ASP A 101 -156.95 -88.56 REMARK 500 HIS A 135 -76.48 -113.94 REMARK 500 HIS A 159 -35.83 -133.83 REMARK 500 GLU A 181 -4.21 68.56 REMARK 500 GLU A 210 -105.97 55.98 REMARK 500 GLN A 221 -90.26 -101.34 REMARK 500 TYR A 224 -69.17 -93.68 REMARK 500 ASP A 232 -9.39 -59.16 REMARK 500 CYS A 240 -149.38 -134.72 REMARK 500 THR A 275 -166.37 -120.81 REMARK 500 TYR D 55 -76.53 -78.93 REMARK 500 THR D 76 -162.72 -114.83 REMARK 500 ASP D 101 -155.73 -87.39 REMARK 500 HIS D 135 -77.70 -115.17 REMARK 500 HIS D 159 -36.97 -134.26 REMARK 500 GLU D 181 -4.14 69.00 REMARK 500 GLU D 210 -101.14 -105.94 REMARK 500 GLN D 221 -87.86 -101.38 REMARK 500 TYR D 224 -67.07 -95.67 REMARK 500 CYS D 240 -148.03 -135.44 REMARK 500 THR D 275 -169.73 -123.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 300 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 48 OE2 REMARK 620 2 ASP A 56 OD1 92.7 REMARK 620 3 ASP A 56 OD2 88.0 52.3 REMARK 620 4 ASP A 101 OD1 97.6 71.5 123.8 REMARK 620 5 SER A 103 O 86.1 149.2 157.9 78.1 REMARK 620 6 ASN A 104 OD1 91.7 130.3 78.4 156.0 80.5 REMARK 620 7 HOH A 419 O 170.4 91.8 101.5 75.9 85.7 91.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 119 OD1 REMARK 620 2 ASP A 119 OD2 48.0 REMARK 620 3 VAL A 120 O 84.5 73.1 REMARK 620 4 GLU A 122 OE1 141.8 136.3 68.1 REMARK 620 5 ASN A 139 OD1 123.2 75.6 85.6 82.0 REMARK 620 6 TYR A 140 O 76.3 75.7 148.8 139.1 84.7 REMARK 620 7 GLY A 143 O 131.0 131.5 144.1 77.9 78.6 61.6 REMARK 620 8 HOH A 408 O 73.5 119.9 90.9 80.6 162.3 106.6 94.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 215 OE1 REMARK 620 2 ASP A 225 OD1 107.4 REMARK 620 3 ASP A 225 OD2 87.1 51.8 REMARK 620 4 ASP A 262 OD1 92.6 67.1 115.2 REMARK 620 5 SER A 264 O 76.3 147.3 157.9 80.4 REMARK 620 6 HOH A 417 O 90.2 127.0 80.9 163.8 84.7 REMARK 620 7 HOH A 420 O 155.2 92.6 117.2 81.6 79.0 89.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 300 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 48 OE2 REMARK 620 2 ASP D 56 OD1 98.7 REMARK 620 3 ASP D 56 OD2 90.8 51.0 REMARK 620 4 ASP D 101 OD1 101.4 69.9 120.9 REMARK 620 5 SER D 103 O 90.6 153.8 153.8 84.4 REMARK 620 6 ASN D 104 OD1 95.8 129.3 80.5 151.9 73.3 REMARK 620 7 HOH D 415 O 169.0 91.1 99.3 77.2 78.4 81.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 119 OD1 REMARK 620 2 ASP D 119 OD2 46.8 REMARK 620 3 VAL D 120 O 80.4 73.6 REMARK 620 4 GLU D 122 OE1 135.7 136.4 66.4 REMARK 620 5 ASN D 139 OD1 132.2 85.5 84.2 74.3 REMARK 620 6 TYR D 140 O 76.6 77.8 151.0 142.3 98.3 REMARK 620 7 GLY D 143 O 130.9 134.8 146.3 80.4 81.4 61.8 REMARK 620 8 HOH D 411 O 68.8 113.2 81.5 77.7 151.9 105.9 97.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 215 OE1 REMARK 620 2 ASP D 225 OD1 79.5 REMARK 620 3 ASP D 225 OD2 80.2 43.5 REMARK 620 4 ASP D 262 OD1 71.5 55.4 97.2 REMARK 620 5 SER D 264 O 83.4 119.8 158.7 64.4 REMARK 620 6 HOH D 413 O 131.1 76.0 107.7 59.8 73.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 302 DBREF 5CKN A 1 278 UNP A2VCV7 A2VCV7_RAT 20 297 DBREF 5CKN D 1 278 UNP A2VCV7 A2VCV7_RAT 20 297 SEQRES 1 A 278 SER LYS TRP PRO GLU PRO VAL PHE GLY ARG LEU VAL SER SEQRES 2 A 278 PRO GLY PHE PRO GLU LYS TYR GLY ASN HIS GLN ASP ARG SEQRES 3 A 278 SER TRP THR LEU THR ALA PRO PRO GLY PHE ARG LEU ARG SEQRES 4 A 278 LEU TYR PHE THR HIS PHE ASN LEU GLU LEU SER TYR ARG SEQRES 5 A 278 CYS GLU TYR ASP PHE VAL LYS LEU THR SER GLY THR LYS SEQRES 6 A 278 VAL LEU ALA THR LEU CYS GLY GLN GLU SER THR ASP THR SEQRES 7 A 278 GLU ARG ALA PRO GLY ASN ASP THR PHE TYR SER LEU GLY SEQRES 8 A 278 PRO SER LEU LYS VAL THR PHE HIS SER ASP TYR SER ASN SEQRES 9 A 278 GLU LYS PRO PHE THR GLY PHE GLU ALA PHE TYR ALA ALA SEQRES 10 A 278 GLU ASP VAL ASP GLU CYS ARG THR SER LEU GLY ASP SER SEQRES 11 A 278 VAL PRO CYS ASP HIS TYR CYS HIS ASN TYR LEU GLY GLY SEQRES 12 A 278 TYR TYR CYS SER CYS ARG VAL GLY TYR ILE LEU HIS GLN SEQRES 13 A 278 ASN LYS HIS THR CYS SER ALA LEU CYS SER GLY GLN VAL SEQRES 14 A 278 PHE THR GLY ARG SER GLY PHE LEU SER SER PRO GLU TYR SEQRES 15 A 278 PRO GLN PRO TYR PRO LYS LEU SER SER CYS ALA TYR ASN SEQRES 16 A 278 ILE ARG LEU GLU GLU GLY PHE SER ILE THR LEU ASP PHE SEQRES 17 A 278 VAL GLU SER PHE ASP VAL GLU MET HIS PRO GLU ALA GLN SEQRES 18 A 278 CYS PRO TYR ASP SER LEU LYS ILE GLN THR ASP LYS ARG SEQRES 19 A 278 GLU TYR GLY PRO PHE CYS GLY LYS THR LEU PRO PRO ARG SEQRES 20 A 278 ILE GLU THR ASP SER ASN LYS VAL THR ILE THR PHE THR SEQRES 21 A 278 THR ASP GLU SER GLY ASN HIS THR GLY TRP LYS ILE HIS SEQRES 22 A 278 TYR THR SER THR ALA SEQRES 1 D 278 SER LYS TRP PRO GLU PRO VAL PHE GLY ARG LEU VAL SER SEQRES 2 D 278 PRO GLY PHE PRO GLU LYS TYR GLY ASN HIS GLN ASP ARG SEQRES 3 D 278 SER TRP THR LEU THR ALA PRO PRO GLY PHE ARG LEU ARG SEQRES 4 D 278 LEU TYR PHE THR HIS PHE ASN LEU GLU LEU SER TYR ARG SEQRES 5 D 278 CYS GLU TYR ASP PHE VAL LYS LEU THR SER GLY THR LYS SEQRES 6 D 278 VAL LEU ALA THR LEU CYS GLY GLN GLU SER THR ASP THR SEQRES 7 D 278 GLU ARG ALA PRO GLY ASN ASP THR PHE TYR SER LEU GLY SEQRES 8 D 278 PRO SER LEU LYS VAL THR PHE HIS SER ASP TYR SER ASN SEQRES 9 D 278 GLU LYS PRO PHE THR GLY PHE GLU ALA PHE TYR ALA ALA SEQRES 10 D 278 GLU ASP VAL ASP GLU CYS ARG THR SER LEU GLY ASP SER SEQRES 11 D 278 VAL PRO CYS ASP HIS TYR CYS HIS ASN TYR LEU GLY GLY SEQRES 12 D 278 TYR TYR CYS SER CYS ARG VAL GLY TYR ILE LEU HIS GLN SEQRES 13 D 278 ASN LYS HIS THR CYS SER ALA LEU CYS SER GLY GLN VAL SEQRES 14 D 278 PHE THR GLY ARG SER GLY PHE LEU SER SER PRO GLU TYR SEQRES 15 D 278 PRO GLN PRO TYR PRO LYS LEU SER SER CYS ALA TYR ASN SEQRES 16 D 278 ILE ARG LEU GLU GLU GLY PHE SER ILE THR LEU ASP PHE SEQRES 17 D 278 VAL GLU SER PHE ASP VAL GLU MET HIS PRO GLU ALA GLN SEQRES 18 D 278 CYS PRO TYR ASP SER LEU LYS ILE GLN THR ASP LYS ARG SEQRES 19 D 278 GLU TYR GLY PRO PHE CYS GLY LYS THR LEU PRO PRO ARG SEQRES 20 D 278 ILE GLU THR ASP SER ASN LYS VAL THR ILE THR PHE THR SEQRES 21 D 278 THR ASP GLU SER GLY ASN HIS THR GLY TRP LYS ILE HIS SEQRES 22 D 278 TYR THR SER THR ALA HET CA A 300 1 HET CA A 301 1 HET CA A 302 1 HET CA D 300 1 HET CA D 301 1 HET CA D 302 1 HETNAM CA CALCIUM ION FORMUL 3 CA 6(CA 2+) FORMUL 9 HOH *71(H2 O) HELIX 1 AA1 SER A 50 GLU A 54 5 5 HELIX 2 AA2 SER D 50 GLU D 54 5 5 SHEET 1 AA1 4 PHE A 8 VAL A 12 0 SHEET 2 AA1 4 GLY A 110 ASP A 119 -1 O ALA A 113 N LEU A 11 SHEET 3 AA1 4 PHE A 36 ASN A 46 -1 N ARG A 37 O GLU A 118 SHEET 4 AA1 4 PHE A 87 TYR A 88 -1 O PHE A 87 N LEU A 40 SHEET 1 AA2 4 ASP A 25 THR A 31 0 SHEET 2 AA2 4 SER A 93 HIS A 99 -1 O LEU A 94 N LEU A 30 SHEET 3 AA2 4 PHE A 57 SER A 62 -1 N THR A 61 O LYS A 95 SHEET 4 AA2 4 LYS A 65 LEU A 70 -1 O LYS A 65 N SER A 62 SHEET 1 AA3 2 TYR A 136 TYR A 140 0 SHEET 2 AA3 2 GLY A 143 SER A 147 -1 O TYR A 145 N HIS A 138 SHEET 1 AA4 2 TYR A 152 LEU A 154 0 SHEET 2 AA4 2 CYS A 161 ALA A 163 -1 O SER A 162 N ILE A 153 SHEET 1 AA5 5 GLN A 168 PHE A 170 0 SHEET 2 AA5 5 SER A 191 ARG A 197 1 O ASN A 195 N GLN A 168 SHEET 3 AA5 5 LYS A 254 THR A 260 -1 O VAL A 255 N ILE A 196 SHEET 4 AA5 5 SER A 226 THR A 231 -1 N LYS A 228 O THR A 258 SHEET 5 AA5 5 ARG A 234 TYR A 236 -1 O TYR A 236 N ILE A 229 SHEET 1 AA6 4 GLY A 175 SER A 178 0 SHEET 2 AA6 4 GLY A 269 THR A 277 -1 O TYR A 274 N GLY A 175 SHEET 3 AA6 4 SER A 203 ASP A 213 -1 N ASP A 207 O HIS A 273 SHEET 4 AA6 4 ILE A 248 GLU A 249 -1 O ILE A 248 N LEU A 206 SHEET 1 AA7 4 PHE D 8 VAL D 12 0 SHEET 2 AA7 4 GLY D 110 ASP D 119 -1 O ALA D 113 N LEU D 11 SHEET 3 AA7 4 PHE D 36 ASN D 46 -1 N ARG D 37 O GLU D 118 SHEET 4 AA7 4 THR D 86 TYR D 88 -1 O PHE D 87 N LEU D 40 SHEET 1 AA8 4 ASP D 25 THR D 31 0 SHEET 2 AA8 4 SER D 93 HIS D 99 -1 O LEU D 94 N LEU D 30 SHEET 3 AA8 4 PHE D 57 SER D 62 -1 N THR D 61 O LYS D 95 SHEET 4 AA8 4 LYS D 65 LEU D 70 -1 O LEU D 70 N VAL D 58 SHEET 1 AA9 2 TYR D 136 TYR D 140 0 SHEET 2 AA9 2 GLY D 143 SER D 147 -1 O TYR D 145 N HIS D 138 SHEET 1 AB1 2 TYR D 152 LEU D 154 0 SHEET 2 AB1 2 CYS D 161 ALA D 163 -1 O SER D 162 N ILE D 153 SHEET 1 AB2 5 SER D 166 PHE D 170 0 SHEET 2 AB2 5 SER D 191 ARG D 197 1 O ASN D 195 N GLN D 168 SHEET 3 AB2 5 LYS D 254 THR D 260 -1 O ILE D 257 N TYR D 194 SHEET 4 AB2 5 SER D 226 THR D 231 -1 N LYS D 228 O THR D 258 SHEET 5 AB2 5 ARG D 234 PHE D 239 -1 O TYR D 236 N ILE D 229 SHEET 1 AB3 4 GLY D 175 SER D 178 0 SHEET 2 AB3 4 GLY D 269 THR D 277 -1 O TYR D 274 N GLY D 175 SHEET 3 AB3 4 SER D 203 ASP D 213 -1 N ASP D 207 O HIS D 273 SHEET 4 AB3 4 ILE D 248 GLU D 249 -1 O ILE D 248 N LEU D 206 SSBOND 1 CYS A 53 CYS A 71 1555 1555 2.06 SSBOND 2 CYS A 123 CYS A 137 1555 1555 2.03 SSBOND 3 CYS A 133 CYS A 146 1555 1555 2.03 SSBOND 4 CYS A 148 CYS A 161 1555 1555 2.03 SSBOND 5 CYS A 165 CYS A 192 1555 1555 2.03 SSBOND 6 CYS A 222 CYS A 240 1555 1555 2.03 SSBOND 7 CYS D 53 CYS D 71 1555 1555 2.04 SSBOND 8 CYS D 123 CYS D 137 1555 1555 2.04 SSBOND 9 CYS D 133 CYS D 146 1555 1555 2.03 SSBOND 10 CYS D 148 CYS D 161 1555 1555 2.03 SSBOND 11 CYS D 165 CYS D 192 1555 1555 2.03 SSBOND 12 CYS D 222 CYS D 240 1555 1555 2.03 LINK OE2 GLU A 48 CA CA A 300 1555 1555 2.21 LINK OD1 ASP A 56 CA CA A 300 1555 1555 2.55 LINK OD2 ASP A 56 CA CA A 300 1555 1555 2.43 LINK OD1 ASP A 101 CA CA A 300 1555 1555 2.34 LINK O SER A 103 CA CA A 300 1555 1555 2.47 LINK OD1 ASN A 104 CA CA A 300 1555 1555 2.33 LINK OD1 ASP A 119 CA CA A 301 1555 1555 2.53 LINK OD2 ASP A 119 CA CA A 301 1555 1555 2.81 LINK O VAL A 120 CA CA A 301 1555 1555 2.33 LINK OE1 GLU A 122 CA CA A 301 1555 1555 2.59 LINK OD1 ASN A 139 CA CA A 301 1555 1555 2.35 LINK O TYR A 140 CA CA A 301 1555 1555 2.54 LINK O GLY A 143 CA CA A 301 1555 1555 2.63 LINK OE1 GLU A 215 CA CA A 302 1555 1555 2.39 LINK OD1 ASP A 225 CA CA A 302 1555 1555 2.64 LINK OD2 ASP A 225 CA CA A 302 1555 1555 2.34 LINK OD1 ASP A 262 CA CA A 302 1555 1555 2.28 LINK O SER A 264 CA CA A 302 1555 1555 2.54 LINK CA CA A 300 O HOH A 419 1555 1555 2.26 LINK CA CA A 301 O HOH A 408 1555 1555 2.49 LINK CA CA A 302 O HOH A 417 1555 1555 2.68 LINK CA CA A 302 O HOH A 420 1555 1555 2.42 LINK OE2 GLU D 48 CA CA D 300 1555 1555 2.33 LINK OD1 ASP D 56 CA CA D 300 1555 1555 2.65 LINK OD2 ASP D 56 CA CA D 300 1555 1555 2.42 LINK OD1 ASP D 101 CA CA D 300 1555 1555 2.29 LINK O SER D 103 CA CA D 300 1555 1555 2.41 LINK OD1 ASN D 104 CA CA D 300 1555 1555 2.39 LINK OD1 ASP D 119 CA CA D 301 1555 1555 2.63 LINK OD2 ASP D 119 CA CA D 301 1555 1555 2.86 LINK O VAL D 120 CA CA D 301 1555 1555 2.41 LINK OE1 GLU D 122 CA CA D 301 1555 1555 2.62 LINK OD1AASN D 139 CA CA D 301 1555 1555 2.30 LINK O TYR D 140 CA CA D 301 1555 1555 2.55 LINK O GLY D 143 CA CA D 301 1555 1555 2.67 LINK OE1 GLU D 215 CA CA D 302 1555 1555 2.67 LINK OD1 ASP D 225 CA CA D 302 1555 1555 3.18 LINK OD2 ASP D 225 CA CA D 302 1555 1555 2.40 LINK OD1 ASP D 262 CA CA D 302 1555 1555 2.60 LINK O SER D 264 CA CA D 302 1555 1555 2.45 LINK CA CA D 300 O HOH D 415 1555 1555 2.34 LINK CA CA D 301 O HOH D 411 1555 1555 2.33 LINK CA CA D 302 O HOH D 413 1555 1555 2.73 CISPEP 1 PHE A 16 PRO A 17 0 4.73 CISPEP 2 TYR A 182 PRO A 183 0 3.86 CISPEP 3 GLY A 237 PRO A 238 0 1.83 CISPEP 4 PHE D 16 PRO D 17 0 4.80 CISPEP 5 TYR D 182 PRO D 183 0 4.60 CISPEP 6 GLY D 237 PRO D 238 0 4.31 SITE 1 AC1 6 GLU A 48 ASP A 56 ASP A 101 SER A 103 SITE 2 AC1 6 ASN A 104 HOH A 419 SITE 1 AC2 7 ASP A 119 VAL A 120 GLU A 122 ASN A 139 SITE 2 AC2 7 TYR A 140 GLY A 143 HOH A 408 SITE 1 AC3 6 GLU A 215 ASP A 225 ASP A 262 SER A 264 SITE 2 AC3 6 HOH A 417 HOH A 420 SITE 1 AC4 6 GLU D 48 ASP D 56 ASP D 101 SER D 103 SITE 2 AC4 6 ASN D 104 HOH D 415 SITE 1 AC5 7 ASP D 119 VAL D 120 GLU D 122 ASN D 139 SITE 2 AC5 7 TYR D 140 GLY D 143 HOH D 411 SITE 1 AC6 5 GLU D 215 ASP D 225 ASP D 262 SER D 264 SITE 2 AC6 5 HOH D 413 CRYST1 83.640 91.340 127.090 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011956 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010948 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007868 0.00000