data_5CKY # _entry.id 5CKY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CKY pdb_00005cky 10.2210/pdb5cky/pdb WWPDB D_1000206554 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5CO0 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CKY _pdbx_database_status.recvd_initial_deposition_date 2015-07-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Byrnes, J.' 1 'Hauser, K.' 2 'Norona, L.' 3 'Mejia, E.' 4 'Simmerling, C.' 5 'Garcia-Diaz, M.' 6 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary J.Mol.Biol. JMOBAK 0070 1089-8638 ? ? 428 ? 2542 2556 'Base Flipping by MTERF1 Can Accommodate Multiple Conformations and Occurs in a Stepwise Fashion.' 2016 ? 10.1016/j.jmb.2015.10.021 26523681 ? ? ? ? ? ? ? ? ? ? ? 1 Cell ? ? 1097-4172 ? ? 141 ? 982 993 'Helix unwinding and base flipping enable human MTERF1 to terminate mitochondrial transcription.' 2010 ? 10.1016/j.cell.2010.05.018 20550934 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Byrnes, J.' 1 ? primary 'Hauser, K.' 2 ? primary 'Norona, L.' 3 ? primary 'Mejia, E.' 4 ? primary 'Simmerling, C.' 5 ? primary 'Garcia-Diaz, M.' 6 ? 1 'Yakubovskaya, E.' 7 ? 1 'Mejia, E.' 8 ? 1 'Byrnes, J.' 9 ? 1 'Hambardjieva, E.' 10 ? 1 'Garcia-Diaz, M.' 11 ? # _cell.length_a 88.217 _cell.length_b 91.161 _cell.length_c 159.103 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 5CKY _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 5CKY _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcription termination factor 1, mitochondrial' 37125.066 1 ? R162A 'UNP residues 57-396' ? 2 polymer syn "5'-D(*AP*TP*TP*AP*CP*CP*GP*GP*GP*CP*TP*CP*TP*GP*CP*CP*AP*TP*CP*TP*TP*A)-3'" 6678.315 1 ? ? ? ? 3 polymer syn ;5' -D (*TP*AP*AP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*CP*CP*CP*GP*GP*TP*AP*AP*T)-3' ; 6825.429 1 ? ? ? ? 4 water nat water 18.015 8 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'cDNA FLJ51270,highly similar to Transcription termination factor,mitochondrial' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQDLKMFLLSKGASKEVIASIISRYPRAITRTPENLSKRWDLWRKIVTS DLEIVNILEASPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFLQAAGLSLGHNDPAD FVRKIIFKNPFILIQSTKRVKANIEFLRSTFNLNSEELLVLICGPGAEILDLSNDYARRSYANIKEKLFSLGCTEEEVQK FVLSYPDVIFLAEKKFNDKIDCLMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNITLLSWSKKRYEAKL KKLS ; ;EDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQDLKMFLLSKGASKEVIASIISRYPRAITRTPENLSKRWDLWRKIVTS DLEIVNILEASPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFLQAAGLSLGHNDPAD FVRKIIFKNPFILIQSTKRVKANIEFLRSTFNLNSEELLVLICGPGAEILDLSNDYARRSYANIKEKLFSLGCTEEEVQK FVLSYPDVIFLAEKKFNDKIDCLMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNITLLSWSKKRYEAKL KKLS ; O ? 2 polydeoxyribonucleotide no no ;(DA)(DT)(DT)(DA)(DC)(DC)(DG)(DG)(DG)(DC)(DT)(DC)(DT)(DG)(DC)(DC)(DA)(DT)(DC)(DT) (DT)(DA) ; ATTACCGGGCTCTGCCATCTTA D ? 3 polydeoxyribonucleotide no no ;(DT)(DA)(DA)(DG)(DA)(DT)(DG)(DG)(DC)(DA)(DG)(DA)(DG)(DC)(DC)(DC)(DG)(DG)(DT)(DA) (DA)(DT) ; TAAGATGGCAGAGCCCGGTAAT E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 ASP n 1 3 LEU n 1 4 LEU n 1 5 LYS n 1 6 ASN n 1 7 LEU n 1 8 LEU n 1 9 THR n 1 10 MET n 1 11 GLY n 1 12 VAL n 1 13 ASP n 1 14 ILE n 1 15 ASP n 1 16 MET n 1 17 ALA n 1 18 ARG n 1 19 LYS n 1 20 ARG n 1 21 GLN n 1 22 PRO n 1 23 GLY n 1 24 VAL n 1 25 PHE n 1 26 HIS n 1 27 ARG n 1 28 MET n 1 29 ILE n 1 30 THR n 1 31 ASN n 1 32 GLU n 1 33 GLN n 1 34 ASP n 1 35 LEU n 1 36 LYS n 1 37 MET n 1 38 PHE n 1 39 LEU n 1 40 LEU n 1 41 SER n 1 42 LYS n 1 43 GLY n 1 44 ALA n 1 45 SER n 1 46 LYS n 1 47 GLU n 1 48 VAL n 1 49 ILE n 1 50 ALA n 1 51 SER n 1 52 ILE n 1 53 ILE n 1 54 SER n 1 55 ARG n 1 56 TYR n 1 57 PRO n 1 58 ARG n 1 59 ALA n 1 60 ILE n 1 61 THR n 1 62 ARG n 1 63 THR n 1 64 PRO n 1 65 GLU n 1 66 ASN n 1 67 LEU n 1 68 SER n 1 69 LYS n 1 70 ARG n 1 71 TRP n 1 72 ASP n 1 73 LEU n 1 74 TRP n 1 75 ARG n 1 76 LYS n 1 77 ILE n 1 78 VAL n 1 79 THR n 1 80 SER n 1 81 ASP n 1 82 LEU n 1 83 GLU n 1 84 ILE n 1 85 VAL n 1 86 ASN n 1 87 ILE n 1 88 LEU n 1 89 GLU n 1 90 ALA n 1 91 SER n 1 92 PRO n 1 93 GLU n 1 94 SER n 1 95 PHE n 1 96 PHE n 1 97 ARG n 1 98 SER n 1 99 ASN n 1 100 ASN n 1 101 ASN n 1 102 LEU n 1 103 ASN n 1 104 LEU n 1 105 GLU n 1 106 ASN n 1 107 ASN n 1 108 ILE n 1 109 LYS n 1 110 PHE n 1 111 LEU n 1 112 TYR n 1 113 SER n 1 114 VAL n 1 115 GLY n 1 116 LEU n 1 117 THR n 1 118 ARG n 1 119 LYS n 1 120 CYS n 1 121 LEU n 1 122 CYS n 1 123 ARG n 1 124 LEU n 1 125 LEU n 1 126 THR n 1 127 ASN n 1 128 ALA n 1 129 PRO n 1 130 ARG n 1 131 THR n 1 132 PHE n 1 133 SER n 1 134 ASN n 1 135 SER n 1 136 LEU n 1 137 ASP n 1 138 LEU n 1 139 ASN n 1 140 LYS n 1 141 GLN n 1 142 MET n 1 143 VAL n 1 144 GLU n 1 145 PHE n 1 146 LEU n 1 147 GLN n 1 148 ALA n 1 149 ALA n 1 150 GLY n 1 151 LEU n 1 152 SER n 1 153 LEU n 1 154 GLY n 1 155 HIS n 1 156 ASN n 1 157 ASP n 1 158 PRO n 1 159 ALA n 1 160 ASP n 1 161 PHE n 1 162 VAL n 1 163 ARG n 1 164 LYS n 1 165 ILE n 1 166 ILE n 1 167 PHE n 1 168 LYS n 1 169 ASN n 1 170 PRO n 1 171 PHE n 1 172 ILE n 1 173 LEU n 1 174 ILE n 1 175 GLN n 1 176 SER n 1 177 THR n 1 178 LYS n 1 179 ARG n 1 180 VAL n 1 181 LYS n 1 182 ALA n 1 183 ASN n 1 184 ILE n 1 185 GLU n 1 186 PHE n 1 187 LEU n 1 188 ARG n 1 189 SER n 1 190 THR n 1 191 PHE n 1 192 ASN n 1 193 LEU n 1 194 ASN n 1 195 SER n 1 196 GLU n 1 197 GLU n 1 198 LEU n 1 199 LEU n 1 200 VAL n 1 201 LEU n 1 202 ILE n 1 203 CYS n 1 204 GLY n 1 205 PRO n 1 206 GLY n 1 207 ALA n 1 208 GLU n 1 209 ILE n 1 210 LEU n 1 211 ASP n 1 212 LEU n 1 213 SER n 1 214 ASN n 1 215 ASP n 1 216 TYR n 1 217 ALA n 1 218 ARG n 1 219 ARG n 1 220 SER n 1 221 TYR n 1 222 ALA n 1 223 ASN n 1 224 ILE n 1 225 LYS n 1 226 GLU n 1 227 LYS n 1 228 LEU n 1 229 PHE n 1 230 SER n 1 231 LEU n 1 232 GLY n 1 233 CYS n 1 234 THR n 1 235 GLU n 1 236 GLU n 1 237 GLU n 1 238 VAL n 1 239 GLN n 1 240 LYS n 1 241 PHE n 1 242 VAL n 1 243 LEU n 1 244 SER n 1 245 TYR n 1 246 PRO n 1 247 ASP n 1 248 VAL n 1 249 ILE n 1 250 PHE n 1 251 LEU n 1 252 ALA n 1 253 GLU n 1 254 LYS n 1 255 LYS n 1 256 PHE n 1 257 ASN n 1 258 ASP n 1 259 LYS n 1 260 ILE n 1 261 ASP n 1 262 CYS n 1 263 LEU n 1 264 MET n 1 265 GLU n 1 266 GLU n 1 267 ASN n 1 268 ILE n 1 269 SER n 1 270 ILE n 1 271 SER n 1 272 GLN n 1 273 ILE n 1 274 ILE n 1 275 GLU n 1 276 ASN n 1 277 PRO n 1 278 ARG n 1 279 VAL n 1 280 LEU n 1 281 ASP n 1 282 SER n 1 283 SER n 1 284 ILE n 1 285 SER n 1 286 THR n 1 287 LEU n 1 288 LYS n 1 289 SER n 1 290 ARG n 1 291 ILE n 1 292 LYS n 1 293 GLU n 1 294 LEU n 1 295 VAL n 1 296 ASN n 1 297 ALA n 1 298 GLY n 1 299 CYS n 1 300 ASN n 1 301 LEU n 1 302 SER n 1 303 THR n 1 304 LEU n 1 305 ASN n 1 306 ILE n 1 307 THR n 1 308 LEU n 1 309 LEU n 1 310 SER n 1 311 TRP n 1 312 SER n 1 313 LYS n 1 314 LYS n 1 315 ARG n 1 316 TYR n 1 317 GLU n 1 318 ALA n 1 319 LYS n 1 320 LEU n 1 321 LYS n 1 322 LYS n 1 323 LEU n 1 324 SER n 2 1 DA n 2 2 DT n 2 3 DT n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DG n 2 8 DG n 2 9 DG n 2 10 DC n 2 11 DT n 2 12 DC n 2 13 DT n 2 14 DG n 2 15 DC n 2 16 DC n 2 17 DA n 2 18 DT n 2 19 DC n 2 20 DT n 2 21 DT n 2 22 DA n 3 1 DT n 3 2 DA n 3 3 DA n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DG n 3 9 DC n 3 10 DA n 3 11 DG n 3 12 DA n 3 13 DG n 3 14 DC n 3 15 DC n 3 16 DC n 3 17 DG n 3 18 DG n 3 19 DT n 3 20 DA n 3 21 DA n 3 22 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 324 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MTERF1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Arctic Express DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PTEV-HMBP3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.seq_align _struct_ref.seq_dif _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end B4DPR9_HUMAN UNP ? 1 1 ? ? B4DPR9 ? ;EDLLKNLLTMGVDIDMARKRQPGVFHRMITNEQDLKMFLLSKGASKEVIASIISRYPRAITRTPENLSKRWDLWRKIVTS DLEIVNILERSPESFFRSNNNLNLENNIKFLYSVGLTRKCLCRLLTNAPRTFSNSLDLNKQMVEFLQAAGLSLGHNDPAD FVRKIIFKNPFILIQSTKRVKANIEFLRSTFNLNSEELLVLICGPGAEILDLSNDYARRSYANIKEKLFSLGCTEEEVQK FVLSYPDVIFLAEKKFNDKIDCLMEENISISQIIENPRVLDSSISTLKSRIKELVNAGCNLSTLNITLLSWSKKRYEAKL KKLS ; 53 ? 5CKY PDB ? 2 2 ? ? 5CKY ? ? 1 ? 5CKY PDB ? 3 3 ? ? 5CKY ? ? 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5CKY O 1 ? 324 ? B4DPR9 53 ? 376 ? 73 396 2 2 5CKY D 1 ? 22 ? 5CKY 1 ? 22 ? 1 22 3 3 5CKY E 1 ? 22 ? 5CKY 1 ? 22 ? 1 22 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5CKY _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id O _struct_ref_seq_dif.seq_num 90 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code B4DPR9 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 142 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 162 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CKY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Sodium Acetate, 0.1M Tris HCl, 15.5% PEG4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2009-10-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.075 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS BEAMLINE X9A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.075 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X9A _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CKY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.615 _reflns.d_resolution_low 79.55 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19776 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.3 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.615 _reflns_shell.d_res_low 2.624 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.807 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.entry_id 5CKY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.6200 _refine.ls_d_res_low 79.5500 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.9400 _refine.ls_number_reflns_obs 18744 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2164 _refine.ls_R_factor_R_work 0.2142 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2586 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1011 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 53.1800 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.0100 _refine.aniso_B[2][2] 0.0100 _refine.aniso_B[3][3] 0.0100 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9250 _refine.correlation_coeff_Fo_to_Fc_free 0.9020 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.4900 _refine.pdbx_overall_ESU_R_Free 0.2980 _refine.overall_SU_ML 0.2380 _refine.overall_SU_B 11.8670 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3MVA _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 124.440 _refine.B_iso_min 27.840 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.6200 _refine_hist.d_res_low 79.5500 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 3501 _refine_hist.pdbx_number_residues_total 368 _refine_hist.pdbx_B_iso_mean_solvent 35.54 _refine_hist.pdbx_number_atoms_protein 2597 _refine_hist.pdbx_number_atoms_nucleic_acid 896 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 3640 0.012 0.017 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 3143 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 5097 1.689 1.737 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 7264 1.016 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 323 5.694 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 116 33.236 24.224 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 520 16.424 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20 17.619 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 547 0.088 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 3441 0.008 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 807 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1295 3.899 5.116 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1294 3.896 5.115 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1617 5.848 7.675 ? ? # _refine_ls_shell.d_res_high 2.6150 _refine_ls_shell.d_res_low 2.6830 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 1376 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3500 _refine_ls_shell.R_factor_R_free 0.4200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1444 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 5CKY _struct.title 'Crystal Structure of the MTERF1 R162A substitution bound to the termination sequence.' _struct.pdbx_model_details R162A _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CKY _struct_keywords.text 'Protein-DNA, Transcription Factor, Mitochondria, Termination, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 2 ? GLY A 11 ? ASP O 74 GLY O 83 1 ? 10 HELX_P HELX_P2 AA2 ASP A 13 ? GLN A 21 ? ASP O 85 GLN O 93 1 ? 9 HELX_P HELX_P3 AA3 PRO A 22 ? ARG A 27 ? PRO O 94 ARG O 99 5 ? 6 HELX_P HELX_P4 AA4 ASN A 31 ? LYS A 42 ? ASN O 103 LYS O 114 1 ? 12 HELX_P HELX_P5 AA5 SER A 45 ? TYR A 56 ? SER O 117 TYR O 128 1 ? 12 HELX_P HELX_P6 AA6 PRO A 57 ? ARG A 62 ? PRO O 129 ARG O 134 5 ? 6 HELX_P HELX_P7 AA7 THR A 63 ? ARG A 75 ? THR O 135 ARG O 147 1 ? 13 HELX_P HELX_P8 AA8 SER A 80 ? SER A 91 ? SER O 152 SER O 163 1 ? 12 HELX_P HELX_P9 AA9 SER A 91 ? ARG A 97 ? SER O 163 ARG O 169 1 ? 7 HELX_P HELX_P10 AB1 ASN A 100 ? VAL A 114 ? ASN O 172 VAL O 186 1 ? 15 HELX_P HELX_P11 AB2 THR A 117 ? ALA A 128 ? THR O 189 ALA O 200 1 ? 12 HELX_P HELX_P12 AB3 PRO A 129 ? ASN A 134 ? PRO O 201 ASN O 206 1 ? 6 HELX_P HELX_P13 AB4 SER A 135 ? LEU A 153 ? SER O 207 LEU O 225 1 ? 19 HELX_P HELX_P14 AB5 ASP A 157 ? ASN A 169 ? ASP O 229 ASN O 241 1 ? 13 HELX_P HELX_P15 AB6 PHE A 171 ? GLN A 175 ? PHE O 243 GLN O 247 5 ? 5 HELX_P HELX_P16 AB7 SER A 176 ? PHE A 191 ? SER O 248 PHE O 263 1 ? 16 HELX_P HELX_P17 AB8 ASN A 194 ? GLY A 204 ? ASN O 266 GLY O 276 1 ? 11 HELX_P HELX_P18 AB9 GLY A 206 ? LEU A 212 ? GLY O 278 LEU O 284 5 ? 7 HELX_P HELX_P19 AC1 ASP A 215 ? SER A 230 ? ASP O 287 SER O 302 1 ? 16 HELX_P HELX_P20 AC2 THR A 234 ? SER A 244 ? THR O 306 SER O 316 1 ? 11 HELX_P HELX_P21 AC3 TYR A 245 ? LEU A 251 ? TYR O 317 LEU O 323 5 ? 7 HELX_P HELX_P22 AC4 ALA A 252 ? GLU A 265 ? ALA O 324 GLU O 337 1 ? 14 HELX_P HELX_P23 AC5 SER A 269 ? ASN A 276 ? SER O 341 ASN O 348 1 ? 8 HELX_P HELX_P24 AC6 PRO A 277 ? SER A 282 ? PRO O 349 SER O 354 5 ? 6 HELX_P HELX_P25 AC7 SER A 283 ? ASN A 296 ? SER O 355 ASN O 368 1 ? 14 HELX_P HELX_P26 AC8 ASN A 305 ? TRP A 311 ? ASN O 377 TRP O 383 5 ? 7 HELX_P HELX_P27 AC9 SER A 312 ? LEU A 323 ? SER O 384 LEU O 395 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 22 N3 ? ? D DA 1 E DT 22 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog2 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 21 N1 ? ? D DT 2 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 21 N6 ? ? D DT 2 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 20 N1 ? ? D DT 3 E DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 20 N6 ? ? D DT 3 E DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 19 N3 ? ? D DA 4 E DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 19 O4 ? ? D DA 4 E DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 18 N1 ? ? D DC 5 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 18 O6 ? ? D DC 5 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 18 N2 ? ? D DC 5 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 17 N1 ? ? D DC 6 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 17 O6 ? ? D DC 6 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 17 N2 ? ? D DC 6 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 16 N3 ? ? D DG 7 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 16 O2 ? ? D DG 7 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 16 N4 ? ? D DG 7 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 15 N3 ? ? D DG 8 E DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 15 O2 ? ? D DG 8 E DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 15 N4 ? ? D DG 8 E DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 14 N3 ? ? D DG 9 E DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 14 O2 ? ? D DG 9 E DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 14 N4 ? ? D DG 9 E DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 13 N1 ? ? D DC 10 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 13 O6 ? ? D DC 10 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 13 N2 ? ? D DC 10 E DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 13 N3 ? ? ? 1_555 C DA 10 N1 ? ? D DT 13 E DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 13 O4 ? ? ? 1_555 C DA 10 N6 ? ? D DT 13 E DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 9 N3 ? ? D DG 14 E DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 9 O2 ? ? D DG 14 E DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 9 N4 ? ? D DG 14 E DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 8 N1 ? ? D DC 15 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 8 O6 ? ? D DC 15 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 8 N2 ? ? D DC 15 E DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 7 N1 ? ? D DC 16 E DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 7 O6 ? ? D DC 16 E DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 7 N2 ? ? D DC 16 E DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DA 17 N1 ? ? ? 1_555 C DT 6 N3 ? ? D DA 17 E DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DA 17 N6 ? ? ? 1_555 C DT 6 O4 ? ? D DA 17 E DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DT 18 N3 ? ? ? 1_555 C DA 5 N1 ? ? D DT 18 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DT 18 O4 ? ? ? 1_555 C DA 5 N6 ? ? D DT 18 E DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DC 19 N3 ? ? ? 1_555 C DG 4 N1 ? ? D DC 19 E DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DC 19 N4 ? ? ? 1_555 C DG 4 O6 ? ? D DC 19 E DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DC 19 O2 ? ? ? 1_555 C DG 4 N2 ? ? D DC 19 E DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DT 20 N3 ? ? ? 1_555 C DA 3 N1 ? ? D DT 20 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DT 20 O4 ? ? ? 1_555 C DA 3 N6 ? ? D DT 20 E DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DT 21 N3 ? ? ? 1_555 C DA 2 N1 ? ? D DT 21 E DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DT 21 O4 ? ? ? 1_555 C DA 2 N6 ? ? D DT 21 E DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DA 22 N1 ? ? ? 1_555 C DT 1 N3 ? ? D DA 22 E DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DA 22 N6 ? ? ? 1_555 C DT 1 O4 ? ? D DA 22 E DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 192 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 264 _struct_mon_prot_cis.auth_asym_id O _struct_mon_prot_cis.pdbx_label_comp_id_2 LEU _struct_mon_prot_cis.pdbx_label_seq_id_2 193 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LEU _struct_mon_prot_cis.pdbx_auth_seq_id_2 265 _struct_mon_prot_cis.pdbx_auth_asym_id_2 O _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.20 # _atom_sites.entry_id 5CKY _atom_sites.fract_transf_matrix[1][1] 0.011336 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010970 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006285 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 73 73 GLU GLU O . n A 1 2 ASP 2 74 74 ASP ASP O . n A 1 3 LEU 3 75 75 LEU LEU O . n A 1 4 LEU 4 76 76 LEU LEU O . n A 1 5 LYS 5 77 77 LYS LYS O . n A 1 6 ASN 6 78 78 ASN ASN O . n A 1 7 LEU 7 79 79 LEU LEU O . n A 1 8 LEU 8 80 80 LEU LEU O . n A 1 9 THR 9 81 81 THR THR O . n A 1 10 MET 10 82 82 MET MET O . n A 1 11 GLY 11 83 83 GLY GLY O . n A 1 12 VAL 12 84 84 VAL VAL O . n A 1 13 ASP 13 85 85 ASP ASP O . n A 1 14 ILE 14 86 86 ILE ILE O . n A 1 15 ASP 15 87 87 ASP ASP O . n A 1 16 MET 16 88 88 MET MET O . n A 1 17 ALA 17 89 89 ALA ALA O . n A 1 18 ARG 18 90 90 ARG ARG O . n A 1 19 LYS 19 91 91 LYS LYS O . n A 1 20 ARG 20 92 92 ARG ARG O . n A 1 21 GLN 21 93 93 GLN GLN O . n A 1 22 PRO 22 94 94 PRO PRO O . n A 1 23 GLY 23 95 95 GLY GLY O . n A 1 24 VAL 24 96 96 VAL VAL O . n A 1 25 PHE 25 97 97 PHE PHE O . n A 1 26 HIS 26 98 98 HIS HIS O . n A 1 27 ARG 27 99 99 ARG ARG O . n A 1 28 MET 28 100 100 MET MET O . n A 1 29 ILE 29 101 101 ILE ILE O . n A 1 30 THR 30 102 102 THR THR O . n A 1 31 ASN 31 103 103 ASN ASN O . n A 1 32 GLU 32 104 104 GLU GLU O . n A 1 33 GLN 33 105 105 GLN GLN O . n A 1 34 ASP 34 106 106 ASP ASP O . n A 1 35 LEU 35 107 107 LEU LEU O . n A 1 36 LYS 36 108 108 LYS LYS O . n A 1 37 MET 37 109 109 MET MET O . n A 1 38 PHE 38 110 110 PHE PHE O . n A 1 39 LEU 39 111 111 LEU LEU O . n A 1 40 LEU 40 112 112 LEU LEU O . n A 1 41 SER 41 113 113 SER SER O . n A 1 42 LYS 42 114 114 LYS LYS O . n A 1 43 GLY 43 115 115 GLY GLY O . n A 1 44 ALA 44 116 116 ALA ALA O . n A 1 45 SER 45 117 117 SER SER O . n A 1 46 LYS 46 118 118 LYS LYS O . n A 1 47 GLU 47 119 119 GLU GLU O . n A 1 48 VAL 48 120 120 VAL VAL O . n A 1 49 ILE 49 121 121 ILE ILE O . n A 1 50 ALA 50 122 122 ALA ALA O . n A 1 51 SER 51 123 123 SER SER O . n A 1 52 ILE 52 124 124 ILE ILE O . n A 1 53 ILE 53 125 125 ILE ILE O . n A 1 54 SER 54 126 126 SER SER O . n A 1 55 ARG 55 127 127 ARG ARG O . n A 1 56 TYR 56 128 128 TYR TYR O . n A 1 57 PRO 57 129 129 PRO PRO O . n A 1 58 ARG 58 130 130 ARG ARG O . n A 1 59 ALA 59 131 131 ALA ALA O . n A 1 60 ILE 60 132 132 ILE ILE O . n A 1 61 THR 61 133 133 THR THR O . n A 1 62 ARG 62 134 134 ARG ARG O . n A 1 63 THR 63 135 135 THR THR O . n A 1 64 PRO 64 136 136 PRO PRO O . n A 1 65 GLU 65 137 137 GLU GLU O . n A 1 66 ASN 66 138 138 ASN ASN O . n A 1 67 LEU 67 139 139 LEU LEU O . n A 1 68 SER 68 140 140 SER SER O . n A 1 69 LYS 69 141 141 LYS LYS O . n A 1 70 ARG 70 142 142 ARG ARG O . n A 1 71 TRP 71 143 143 TRP TRP O . n A 1 72 ASP 72 144 144 ASP ASP O . n A 1 73 LEU 73 145 145 LEU LEU O . n A 1 74 TRP 74 146 146 TRP TRP O . n A 1 75 ARG 75 147 147 ARG ARG O . n A 1 76 LYS 76 148 148 LYS LYS O . n A 1 77 ILE 77 149 149 ILE ILE O . n A 1 78 VAL 78 150 150 VAL VAL O . n A 1 79 THR 79 151 151 THR THR O . n A 1 80 SER 80 152 152 SER SER O . n A 1 81 ASP 81 153 153 ASP ASP O . n A 1 82 LEU 82 154 154 LEU LEU O . n A 1 83 GLU 83 155 155 GLU GLU O . n A 1 84 ILE 84 156 156 ILE ILE O . n A 1 85 VAL 85 157 157 VAL VAL O . n A 1 86 ASN 86 158 158 ASN ASN O . n A 1 87 ILE 87 159 159 ILE ILE O . n A 1 88 LEU 88 160 160 LEU LEU O . n A 1 89 GLU 89 161 161 GLU GLU O . n A 1 90 ALA 90 162 162 ALA ALA O . n A 1 91 SER 91 163 163 SER SER O . n A 1 92 PRO 92 164 164 PRO PRO O . n A 1 93 GLU 93 165 165 GLU GLU O . n A 1 94 SER 94 166 166 SER SER O . n A 1 95 PHE 95 167 167 PHE PHE O . n A 1 96 PHE 96 168 168 PHE PHE O . n A 1 97 ARG 97 169 169 ARG ARG O . n A 1 98 SER 98 170 170 SER SER O . n A 1 99 ASN 99 171 171 ASN ASN O . n A 1 100 ASN 100 172 172 ASN ASN O . n A 1 101 ASN 101 173 173 ASN ASN O . n A 1 102 LEU 102 174 174 LEU LEU O . n A 1 103 ASN 103 175 175 ASN ASN O . n A 1 104 LEU 104 176 176 LEU LEU O . n A 1 105 GLU 105 177 177 GLU GLU O . n A 1 106 ASN 106 178 178 ASN ASN O . n A 1 107 ASN 107 179 179 ASN ASN O . n A 1 108 ILE 108 180 180 ILE ILE O . n A 1 109 LYS 109 181 181 LYS LYS O . n A 1 110 PHE 110 182 182 PHE PHE O . n A 1 111 LEU 111 183 183 LEU LEU O . n A 1 112 TYR 112 184 184 TYR TYR O . n A 1 113 SER 113 185 185 SER SER O . n A 1 114 VAL 114 186 186 VAL VAL O . n A 1 115 GLY 115 187 187 GLY GLY O . n A 1 116 LEU 116 188 188 LEU LEU O . n A 1 117 THR 117 189 189 THR THR O . n A 1 118 ARG 118 190 190 ARG ARG O . n A 1 119 LYS 119 191 191 LYS LYS O . n A 1 120 CYS 120 192 192 CYS CYS O . n A 1 121 LEU 121 193 193 LEU LEU O . n A 1 122 CYS 122 194 194 CYS CYS O . n A 1 123 ARG 123 195 195 ARG ARG O . n A 1 124 LEU 124 196 196 LEU LEU O . n A 1 125 LEU 125 197 197 LEU LEU O . n A 1 126 THR 126 198 198 THR THR O . n A 1 127 ASN 127 199 199 ASN ASN O . n A 1 128 ALA 128 200 200 ALA ALA O . n A 1 129 PRO 129 201 201 PRO PRO O . n A 1 130 ARG 130 202 202 ARG ARG O . n A 1 131 THR 131 203 203 THR THR O . n A 1 132 PHE 132 204 204 PHE PHE O . n A 1 133 SER 133 205 205 SER SER O . n A 1 134 ASN 134 206 206 ASN ASN O . n A 1 135 SER 135 207 207 SER SER O . n A 1 136 LEU 136 208 208 LEU LEU O . n A 1 137 ASP 137 209 209 ASP ASP O . n A 1 138 LEU 138 210 210 LEU LEU O . n A 1 139 ASN 139 211 211 ASN ASN O . n A 1 140 LYS 140 212 212 LYS LYS O . n A 1 141 GLN 141 213 213 GLN GLN O . n A 1 142 MET 142 214 214 MET MET O . n A 1 143 VAL 143 215 215 VAL VAL O . n A 1 144 GLU 144 216 216 GLU GLU O . n A 1 145 PHE 145 217 217 PHE PHE O . n A 1 146 LEU 146 218 218 LEU LEU O . n A 1 147 GLN 147 219 219 GLN GLN O . n A 1 148 ALA 148 220 220 ALA ALA O . n A 1 149 ALA 149 221 221 ALA ALA O . n A 1 150 GLY 150 222 222 GLY GLY O . n A 1 151 LEU 151 223 223 LEU LEU O . n A 1 152 SER 152 224 224 SER SER O . n A 1 153 LEU 153 225 225 LEU LEU O . n A 1 154 GLY 154 226 226 GLY GLY O . n A 1 155 HIS 155 227 227 HIS HIS O . n A 1 156 ASN 156 228 228 ASN ASN O . n A 1 157 ASP 157 229 229 ASP ASP O . n A 1 158 PRO 158 230 230 PRO PRO O . n A 1 159 ALA 159 231 231 ALA ALA O . n A 1 160 ASP 160 232 232 ASP ASP O . n A 1 161 PHE 161 233 233 PHE PHE O . n A 1 162 VAL 162 234 234 VAL VAL O . n A 1 163 ARG 163 235 235 ARG ARG O . n A 1 164 LYS 164 236 236 LYS LYS O . n A 1 165 ILE 165 237 237 ILE ILE O . n A 1 166 ILE 166 238 238 ILE ILE O . n A 1 167 PHE 167 239 239 PHE PHE O . n A 1 168 LYS 168 240 240 LYS LYS O . n A 1 169 ASN 169 241 241 ASN ASN O . n A 1 170 PRO 170 242 242 PRO PRO O . n A 1 171 PHE 171 243 243 PHE PHE O . n A 1 172 ILE 172 244 244 ILE ILE O . n A 1 173 LEU 173 245 245 LEU LEU O . n A 1 174 ILE 174 246 246 ILE ILE O . n A 1 175 GLN 175 247 247 GLN GLN O . n A 1 176 SER 176 248 248 SER SER O . n A 1 177 THR 177 249 249 THR THR O . n A 1 178 LYS 178 250 250 LYS LYS O . n A 1 179 ARG 179 251 251 ARG ARG O . n A 1 180 VAL 180 252 252 VAL VAL O . n A 1 181 LYS 181 253 253 LYS LYS O . n A 1 182 ALA 182 254 254 ALA ALA O . n A 1 183 ASN 183 255 255 ASN ASN O . n A 1 184 ILE 184 256 256 ILE ILE O . n A 1 185 GLU 185 257 257 GLU GLU O . n A 1 186 PHE 186 258 258 PHE PHE O . n A 1 187 LEU 187 259 259 LEU LEU O . n A 1 188 ARG 188 260 260 ARG ARG O . n A 1 189 SER 189 261 261 SER SER O . n A 1 190 THR 190 262 262 THR THR O . n A 1 191 PHE 191 263 263 PHE PHE O . n A 1 192 ASN 192 264 264 ASN ASN O . n A 1 193 LEU 193 265 265 LEU LEU O . n A 1 194 ASN 194 266 266 ASN ASN O . n A 1 195 SER 195 267 267 SER SER O . n A 1 196 GLU 196 268 268 GLU GLU O . n A 1 197 GLU 197 269 269 GLU GLU O . n A 1 198 LEU 198 270 270 LEU LEU O . n A 1 199 LEU 199 271 271 LEU LEU O . n A 1 200 VAL 200 272 272 VAL VAL O . n A 1 201 LEU 201 273 273 LEU LEU O . n A 1 202 ILE 202 274 274 ILE ILE O . n A 1 203 CYS 203 275 275 CYS CYS O . n A 1 204 GLY 204 276 276 GLY GLY O . n A 1 205 PRO 205 277 277 PRO PRO O . n A 1 206 GLY 206 278 278 GLY GLY O . n A 1 207 ALA 207 279 279 ALA ALA O . n A 1 208 GLU 208 280 280 GLU GLU O . n A 1 209 ILE 209 281 281 ILE ILE O . n A 1 210 LEU 210 282 282 LEU LEU O . n A 1 211 ASP 211 283 283 ASP ASP O . n A 1 212 LEU 212 284 284 LEU LEU O . n A 1 213 SER 213 285 285 SER SER O . n A 1 214 ASN 214 286 286 ASN ASN O . n A 1 215 ASP 215 287 287 ASP ASP O . n A 1 216 TYR 216 288 288 TYR TYR O . n A 1 217 ALA 217 289 289 ALA ALA O . n A 1 218 ARG 218 290 290 ARG ARG O . n A 1 219 ARG 219 291 291 ARG ARG O . n A 1 220 SER 220 292 292 SER SER O . n A 1 221 TYR 221 293 293 TYR TYR O . n A 1 222 ALA 222 294 294 ALA ALA O . n A 1 223 ASN 223 295 295 ASN ASN O . n A 1 224 ILE 224 296 296 ILE ILE O . n A 1 225 LYS 225 297 297 LYS LYS O . n A 1 226 GLU 226 298 298 GLU GLU O . n A 1 227 LYS 227 299 299 LYS LYS O . n A 1 228 LEU 228 300 300 LEU LEU O . n A 1 229 PHE 229 301 301 PHE PHE O . n A 1 230 SER 230 302 302 SER SER O . n A 1 231 LEU 231 303 303 LEU LEU O . n A 1 232 GLY 232 304 304 GLY GLY O . n A 1 233 CYS 233 305 305 CYS CYS O . n A 1 234 THR 234 306 306 THR THR O . n A 1 235 GLU 235 307 307 GLU GLU O . n A 1 236 GLU 236 308 308 GLU GLU O . n A 1 237 GLU 237 309 309 GLU GLU O . n A 1 238 VAL 238 310 310 VAL VAL O . n A 1 239 GLN 239 311 311 GLN GLN O . n A 1 240 LYS 240 312 312 LYS LYS O . n A 1 241 PHE 241 313 313 PHE PHE O . n A 1 242 VAL 242 314 314 VAL VAL O . n A 1 243 LEU 243 315 315 LEU LEU O . n A 1 244 SER 244 316 316 SER SER O . n A 1 245 TYR 245 317 317 TYR TYR O . n A 1 246 PRO 246 318 318 PRO PRO O . n A 1 247 ASP 247 319 319 ASP ASP O . n A 1 248 VAL 248 320 320 VAL VAL O . n A 1 249 ILE 249 321 321 ILE ILE O . n A 1 250 PHE 250 322 322 PHE PHE O . n A 1 251 LEU 251 323 323 LEU LEU O . n A 1 252 ALA 252 324 324 ALA ALA O . n A 1 253 GLU 253 325 325 GLU GLU O . n A 1 254 LYS 254 326 326 LYS LYS O . n A 1 255 LYS 255 327 327 LYS LYS O . n A 1 256 PHE 256 328 328 PHE PHE O . n A 1 257 ASN 257 329 329 ASN ASN O . n A 1 258 ASP 258 330 330 ASP ASP O . n A 1 259 LYS 259 331 331 LYS LYS O . n A 1 260 ILE 260 332 332 ILE ILE O . n A 1 261 ASP 261 333 333 ASP ASP O . n A 1 262 CYS 262 334 334 CYS CYS O . n A 1 263 LEU 263 335 335 LEU LEU O . n A 1 264 MET 264 336 336 MET MET O . n A 1 265 GLU 265 337 337 GLU GLU O . n A 1 266 GLU 266 338 338 GLU GLU O . n A 1 267 ASN 267 339 339 ASN ASN O . n A 1 268 ILE 268 340 340 ILE ILE O . n A 1 269 SER 269 341 341 SER SER O . n A 1 270 ILE 270 342 342 ILE ILE O . n A 1 271 SER 271 343 343 SER SER O . n A 1 272 GLN 272 344 344 GLN GLN O . n A 1 273 ILE 273 345 345 ILE ILE O . n A 1 274 ILE 274 346 346 ILE ILE O . n A 1 275 GLU 275 347 347 GLU GLU O . n A 1 276 ASN 276 348 348 ASN ASN O . n A 1 277 PRO 277 349 349 PRO PRO O . n A 1 278 ARG 278 350 350 ARG ARG O . n A 1 279 VAL 279 351 351 VAL VAL O . n A 1 280 LEU 280 352 352 LEU LEU O . n A 1 281 ASP 281 353 353 ASP ASP O . n A 1 282 SER 282 354 354 SER SER O . n A 1 283 SER 283 355 355 SER SER O . n A 1 284 ILE 284 356 356 ILE ILE O . n A 1 285 SER 285 357 357 SER SER O . n A 1 286 THR 286 358 358 THR THR O . n A 1 287 LEU 287 359 359 LEU LEU O . n A 1 288 LYS 288 360 360 LYS LYS O . n A 1 289 SER 289 361 361 SER SER O . n A 1 290 ARG 290 362 362 ARG ARG O . n A 1 291 ILE 291 363 363 ILE ILE O . n A 1 292 LYS 292 364 364 LYS LYS O . n A 1 293 GLU 293 365 365 GLU GLU O . n A 1 294 LEU 294 366 366 LEU LEU O . n A 1 295 VAL 295 367 367 VAL VAL O . n A 1 296 ASN 296 368 368 ASN ASN O . n A 1 297 ALA 297 369 369 ALA ALA O . n A 1 298 GLY 298 370 370 GLY GLY O . n A 1 299 CYS 299 371 371 CYS CYS O . n A 1 300 ASN 300 372 372 ASN ASN O . n A 1 301 LEU 301 373 373 LEU LEU O . n A 1 302 SER 302 374 374 SER SER O . n A 1 303 THR 303 375 375 THR THR O . n A 1 304 LEU 304 376 376 LEU LEU O . n A 1 305 ASN 305 377 377 ASN ASN O . n A 1 306 ILE 306 378 378 ILE ILE O . n A 1 307 THR 307 379 379 THR THR O . n A 1 308 LEU 308 380 380 LEU LEU O . n A 1 309 LEU 309 381 381 LEU LEU O . n A 1 310 SER 310 382 382 SER SER O . n A 1 311 TRP 311 383 383 TRP TRP O . n A 1 312 SER 312 384 384 SER SER O . n A 1 313 LYS 313 385 385 LYS LYS O . n A 1 314 LYS 314 386 386 LYS LYS O . n A 1 315 ARG 315 387 387 ARG ARG O . n A 1 316 TYR 316 388 388 TYR TYR O . n A 1 317 GLU 317 389 389 GLU GLU O . n A 1 318 ALA 318 390 390 ALA ALA O . n A 1 319 LYS 319 391 391 LYS LYS O . n A 1 320 LEU 320 392 392 LEU LEU O . n A 1 321 LYS 321 393 393 LYS LYS O . n A 1 322 LYS 322 394 394 LYS LYS O . n A 1 323 LEU 323 395 395 LEU LEU O . n A 1 324 SER 324 396 396 SER SER O . n B 2 1 DA 1 1 1 DA DA D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DT 3 3 3 DT DT D . n B 2 4 DA 4 4 4 DA DA D . n B 2 5 DC 5 5 5 DC DC D . n B 2 6 DC 6 6 6 DC DC D . n B 2 7 DG 7 7 7 DG DG D . n B 2 8 DG 8 8 8 DG DG D . n B 2 9 DG 9 9 9 DG DG D . n B 2 10 DC 10 10 10 DC DC D . n B 2 11 DT 11 11 11 DT DT D . n B 2 12 DC 12 12 12 DC DC D . n B 2 13 DT 13 13 13 DT DT D . n B 2 14 DG 14 14 14 DG DG D . n B 2 15 DC 15 15 15 DC DC D . n B 2 16 DC 16 16 16 DC DC D . n B 2 17 DA 17 17 17 DA DA D . n B 2 18 DT 18 18 18 DT DT D . n B 2 19 DC 19 19 19 DC DC D . n B 2 20 DT 20 20 20 DT DT D . n B 2 21 DT 21 21 21 DT DT D . n B 2 22 DA 22 22 22 DA DA D . n C 3 1 DT 1 1 1 DT DT E . n C 3 2 DA 2 2 2 DA DA E . n C 3 3 DA 3 3 3 DA DA E . n C 3 4 DG 4 4 4 DG DG E . n C 3 5 DA 5 5 5 DA DA E . n C 3 6 DT 6 6 6 DT DT E . n C 3 7 DG 7 7 7 DG DG E . n C 3 8 DG 8 8 8 DG DG E . n C 3 9 DC 9 9 9 DC DC E . n C 3 10 DA 10 10 10 DA DA E . n C 3 11 DG 11 11 11 DG DG E . n C 3 12 DA 12 12 12 DA DA E . n C 3 13 DG 13 13 13 DG DG E . n C 3 14 DC 14 14 14 DC DC E . n C 3 15 DC 15 15 15 DC DC E . n C 3 16 DC 16 16 16 DC DC E . n C 3 17 DG 17 17 17 DG DG E . n C 3 18 DG 18 18 18 DG DG E . n C 3 19 DT 19 19 19 DT DT E . n C 3 20 DA 20 20 20 DA DA E . n C 3 21 DA 21 21 21 DA DA E . n C 3 22 DT 22 22 22 DT DT E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 401 1 HOH HOH O . D 4 HOH 2 402 2 HOH HOH O . D 4 HOH 3 403 4 HOH HOH O . D 4 HOH 4 404 5 HOH HOH O . D 4 HOH 5 405 6 HOH HOH O . D 4 HOH 6 406 3 HOH HOH O . D 4 HOH 7 407 7 HOH HOH O . E 4 HOH 1 101 8 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6410 ? 1 MORE -42 ? 1 'SSA (A^2)' 20500 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-11-25 2 'Structure model' 1 1 2016-04-06 3 'Structure model' 1 2 2016-06-15 4 'Structure model' 1 3 2017-09-13 5 'Structure model' 1 4 2019-12-18 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0071 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ O LYS 391 ? ? OP1 D DT 3 ? ? 2.10 2 1 ND2 O ASN 266 ? ? OE1 O GLU 269 ? ? 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" D DC 12 ? ? P D DT 13 ? ? 1.497 1.607 -0.110 0.012 Y 2 1 "O3'" D DT 13 ? ? P D DG 14 ? ? 1.529 1.607 -0.078 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB O ASP 144 ? ? CG O ASP 144 ? ? OD1 O ASP 144 ? ? 123.81 118.30 5.51 0.90 N 2 1 NE O ARG 169 ? ? CZ O ARG 169 ? ? NH1 O ARG 169 ? ? 123.62 120.30 3.32 0.50 N 3 1 NE O ARG 169 ? ? CZ O ARG 169 ? ? NH2 O ARG 169 ? ? 116.25 120.30 -4.05 0.50 N 4 1 CG O ARG 202 ? ? CD O ARG 202 ? ? NE O ARG 202 ? ? 91.27 111.80 -20.53 2.10 N 5 1 "C1'" D DT 11 ? ? "O4'" D DT 11 ? ? "C4'" D DT 11 ? ? 103.69 110.10 -6.41 1.00 N 6 1 "O5'" D DC 15 ? ? P D DC 15 ? ? OP1 D DC 15 ? ? 119.82 110.70 9.12 1.20 N 7 1 "O5'" E DT 6 ? ? P E DT 6 ? ? OP1 E DT 6 ? ? 99.15 105.70 -6.55 0.90 N 8 1 "O5'" E DC 9 ? ? P E DC 9 ? ? OP1 E DC 9 ? ? 118.27 110.70 7.57 1.20 N 9 1 "O5'" E DC 14 ? ? P E DC 14 ? ? OP2 E DC 14 ? ? 100.06 105.70 -5.64 0.90 N 10 1 "O5'" E DA 21 ? ? P E DA 21 ? ? OP1 E DA 21 ? ? 99.51 105.70 -6.19 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE O 132 ? ? -69.76 0.96 2 1 ALA O 200 ? ? -146.95 59.45 3 1 LEU O 225 ? ? -107.10 -168.54 4 1 PHE O 263 ? ? -103.30 -89.71 5 1 ASN O 264 ? ? -111.08 -77.51 6 1 ASP O 287 ? ? 70.11 -1.35 7 1 TYR O 317 ? ? -167.61 63.70 8 1 ALA O 369 ? ? -102.72 -164.25 9 1 LEU O 373 ? ? 91.92 -36.84 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 O GLU 73 ? CG ? A GLU 1 CG 2 1 Y 1 O GLU 73 ? CD ? A GLU 1 CD 3 1 Y 1 O GLU 73 ? OE1 ? A GLU 1 OE1 4 1 Y 1 O GLU 73 ? OE2 ? A GLU 1 OE2 5 1 Y 1 O ASP 74 ? CG ? A ASP 2 CG 6 1 Y 1 O ASP 74 ? OD1 ? A ASP 2 OD1 7 1 Y 1 O ASP 74 ? OD2 ? A ASP 2 OD2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5CKY 'double helix' 5CKY 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 22 1_555 0.295 0.116 0.126 -3.605 -11.818 16.436 1 D_DA1:DT22_E D 1 ? E 22 ? ? 1 1 B DT 2 1_555 C DA 21 1_555 -0.132 0.026 0.152 -0.350 -16.314 6.010 2 D_DT2:DA21_E D 2 ? E 21 ? 20 1 1 B DT 3 1_555 C DA 20 1_555 -0.249 -0.064 -0.056 1.910 -11.208 0.180 3 D_DT3:DA20_E D 3 ? E 20 ? 20 1 1 B DA 4 1_555 C DT 19 1_555 0.136 -0.317 0.023 -7.949 -9.764 -0.955 4 D_DA4:DT19_E D 4 ? E 19 ? 20 1 1 B DC 5 1_555 C DG 18 1_555 0.065 -0.165 0.394 -7.917 -9.745 0.883 5 D_DC5:DG18_E D 5 ? E 18 ? 19 1 1 B DC 6 1_555 C DG 17 1_555 0.233 -0.058 0.268 -14.245 2.931 -1.660 6 D_DC6:DG17_E D 6 ? E 17 ? 19 1 1 B DG 7 1_555 C DC 16 1_555 0.084 -0.112 0.096 10.594 -2.962 -2.550 7 D_DG7:DC16_E D 7 ? E 16 ? 19 1 1 B DG 8 1_555 C DC 15 1_555 -0.410 -0.203 -0.011 4.922 -9.177 -1.794 8 D_DG8:DC15_E D 8 ? E 15 ? 19 1 1 B DG 9 1_555 C DC 14 1_555 0.357 -0.223 -0.114 -1.122 -2.278 0.414 9 D_DG9:DC14_E D 9 ? E 14 ? 19 1 1 B DC 10 1_555 C DG 13 1_555 0.667 -0.031 -0.257 11.663 4.065 -1.675 10 D_DC10:DG13_E D 10 ? E 13 ? 19 1 1 B DT 13 1_555 C DA 10 1_555 -0.612 -0.048 0.165 -10.683 -7.151 -2.231 11 D_DT13:DA10_E D 13 ? E 10 ? 20 1 1 B DG 14 1_555 C DC 9 1_555 -0.288 -0.143 0.386 5.580 -11.803 3.580 12 D_DG14:DC9_E D 14 ? E 9 ? 19 1 1 B DC 15 1_555 C DG 8 1_555 0.117 -0.270 0.215 -5.433 -10.208 -0.408 13 D_DC15:DG8_E D 15 ? E 8 ? 19 1 1 B DC 16 1_555 C DG 7 1_555 0.134 -0.270 0.023 -3.335 -1.448 -1.828 14 D_DC16:DG7_E D 16 ? E 7 ? 19 1 1 B DA 17 1_555 C DT 6 1_555 -0.150 -0.172 -0.079 -0.947 -8.491 2.979 15 D_DA17:DT6_E D 17 ? E 6 ? 20 1 1 B DT 18 1_555 C DA 5 1_555 0.233 -0.158 0.142 3.818 -12.321 1.382 16 D_DT18:DA5_E D 18 ? E 5 ? 20 1 1 B DC 19 1_555 C DG 4 1_555 0.320 -0.361 0.130 -4.355 -21.023 0.369 17 D_DC19:DG4_E D 19 ? E 4 ? 19 1 1 B DT 20 1_555 C DA 3 1_555 -0.923 -0.089 0.526 -14.863 -17.702 5.886 18 D_DT20:DA3_E D 20 ? E 3 ? 20 1 1 B DT 21 1_555 C DA 2 1_555 0.142 -0.060 -0.111 -9.402 -9.876 2.648 19 D_DT21:DA2_E D 21 ? E 2 ? 20 1 1 B DA 22 1_555 C DT 1 1_555 0.262 -0.356 -0.412 1.094 3.811 0.242 20 D_DA22:DT1_E D 22 ? E 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 22 1_555 B DT 2 1_555 C DA 21 1_555 -0.376 -0.608 3.103 -0.907 2.606 25.900 -2.020 0.601 3.040 5.792 2.016 26.044 1 DD_DA1DT2:DA21DT22_EE D 1 ? E 22 ? D 2 ? E 21 ? 1 B DT 2 1_555 C DA 21 1_555 B DT 3 1_555 C DA 20 1_555 -0.198 -0.361 3.118 1.806 1.174 34.541 -0.779 0.597 3.090 1.975 -3.039 34.606 2 DD_DT2DT3:DA20DA21_EE D 2 ? E 21 ? D 3 ? E 20 ? 1 B DT 3 1_555 C DA 20 1_555 B DA 4 1_555 C DT 19 1_555 0.024 -0.006 3.421 -0.347 2.333 45.106 -0.226 -0.064 3.416 3.038 0.453 45.164 3 DD_DT3DA4:DT19DA20_EE D 3 ? E 20 ? D 4 ? E 19 ? 1 B DA 4 1_555 C DT 19 1_555 B DC 5 1_555 C DG 18 1_555 -0.324 -0.219 3.247 -3.703 -0.207 30.931 -0.368 -0.101 3.264 -0.387 6.912 31.147 4 DD_DA4DC5:DG18DT19_EE D 4 ? E 19 ? D 5 ? E 18 ? 1 B DC 5 1_555 C DG 18 1_555 B DC 6 1_555 C DG 17 1_555 1.384 0.235 3.503 4.578 0.231 37.197 0.333 -1.497 3.643 0.361 -7.144 37.468 5 DD_DC5DC6:DG17DG18_EE D 5 ? E 18 ? D 6 ? E 17 ? 1 B DC 6 1_555 C DG 17 1_555 B DG 7 1_555 C DC 16 1_555 -0.374 0.108 2.955 1.457 -1.873 26.499 0.676 1.157 2.916 -4.076 -3.171 26.603 6 DD_DC6DG7:DC16DG17_EE D 6 ? E 17 ? D 7 ? E 16 ? 1 B DG 7 1_555 C DC 16 1_555 B DG 8 1_555 C DC 15 1_555 0.178 -0.665 3.561 -2.136 1.231 31.545 -1.466 -0.753 3.513 2.260 3.921 31.638 7 DD_DG7DG8:DC15DC16_EE D 7 ? E 16 ? D 8 ? E 15 ? 1 B DG 8 1_555 C DC 15 1_555 B DG 9 1_555 C DC 14 1_555 -0.741 -0.786 3.456 -2.293 5.737 37.466 -1.975 0.833 3.342 8.857 3.540 37.954 8 DD_DG8DG9:DC14DC15_EE D 8 ? E 15 ? D 9 ? E 14 ? 1 B DG 9 1_555 C DC 14 1_555 B DC 10 1_555 C DG 13 1_555 0.206 -0.315 3.060 1.349 4.870 25.904 -1.897 -0.116 2.958 10.734 -2.974 26.384 9 DD_DG9DC10:DG13DC14_EE D 9 ? E 14 ? D 10 ? E 13 ? 1 B DT 13 1_555 C DA 10 1_555 B DG 14 1_555 C DC 9 1_555 1.190 0.881 3.015 -4.442 7.059 33.368 0.467 -2.658 2.956 12.061 7.589 34.366 10 DD_DT13DG14:DC9DA10_EE D 13 ? E 10 ? D 14 ? E 9 ? 1 B DG 14 1_555 C DC 9 1_555 B DC 15 1_555 C DG 8 1_555 0.385 -0.184 3.446 1.912 -2.773 37.330 0.099 -0.334 3.465 -4.322 -2.979 37.476 11 DD_DG14DC15:DG8DC9_EE D 14 ? E 9 ? D 15 ? E 8 ? 1 B DC 15 1_555 C DG 8 1_555 B DC 16 1_555 C DG 7 1_555 -0.235 -0.599 3.227 3.613 9.271 31.737 -2.536 0.992 2.899 16.454 -6.413 33.222 12 DD_DC15DC16:DG7DG8_EE D 15 ? E 8 ? D 16 ? E 7 ? 1 B DC 16 1_555 C DG 7 1_555 B DA 17 1_555 C DT 6 1_555 -0.049 -0.213 3.246 -0.673 3.662 37.410 -0.802 -0.010 3.212 5.692 1.046 37.588 13 DD_DC16DA17:DT6DG7_EE D 16 ? E 7 ? D 17 ? E 6 ? 1 B DA 17 1_555 C DT 6 1_555 B DT 18 1_555 C DA 5 1_555 -0.325 -0.482 3.212 -1.471 -3.647 32.299 -0.228 0.325 3.257 -6.525 2.631 32.531 14 DD_DA17DT18:DA5DT6_EE D 17 ? E 6 ? D 18 ? E 5 ? 1 B DT 18 1_555 C DA 5 1_555 B DC 19 1_555 C DG 4 1_555 -0.005 -0.285 3.381 -0.120 -2.190 38.753 -0.152 -0.008 3.392 -3.296 0.180 38.813 15 DD_DT18DC19:DG4DA5_EE D 18 ? E 5 ? D 19 ? E 4 ? 1 B DC 19 1_555 C DG 4 1_555 B DT 20 1_555 C DA 3 1_555 0.167 -0.763 3.513 0.280 1.964 29.154 -1.967 -0.266 3.457 3.897 -0.556 29.220 16 DD_DC19DT20:DA3DG4_EE D 19 ? E 4 ? D 20 ? E 3 ? 1 B DT 20 1_555 C DA 3 1_555 B DT 21 1_555 C DA 2 1_555 0.090 0.562 3.188 4.528 -5.563 43.982 1.237 0.284 3.092 -7.369 -5.999 44.534 17 DD_DT20DT21:DA2DA3_EE D 20 ? E 3 ? D 21 ? E 2 ? 1 B DT 21 1_555 C DA 2 1_555 B DA 22 1_555 C DT 1 1_555 0.533 1.354 3.207 1.866 -2.413 35.302 2.569 -0.610 3.133 -3.970 -3.069 35.429 18 DD_DT21DA22:DT1DA2_EE D 21 ? E 2 ? D 22 ? E 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' R00-ES015421 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01-GM100021 2 'United Mitochondrial Disease Foundation' 'United States' 'UMDF to M.G.D' 3 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' T32-GM092714 4 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3MVA _pdbx_initial_refinement_model.details ? #