HEADER ISOMERASE 16-JUL-15 5CLI TITLE STRUCTURE OF PURE (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE) TITLE 2 FROM THE ACIDOPHILIC BACTERIUM ACETOBACTER ACETI, COMPLEXED WITH AIR TITLE 3 (5-AMINOIMIDAZOLE RIBONUCLEOTIDE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: N5-CAIR MUTASE,5-(CARBOXYAMINO)IMIDAZOLE RIBONUCLEOTIDE COMPND 5 MUTASE; COMPND 6 EC: 5.4.99.18; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACETOBACTER ACETI 1023; SOURCE 3 ORGANISM_TAXID: 1457393; SOURCE 4 GENE: PURE, AZ09_02690; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS ACIDOPHILE, PURINE BIOSYNTHESIS, PURE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.M.STARKS,T.J.KAPPOCK REVDAT 4 27-SEP-23 5CLI 1 REMARK REVDAT 3 27-NOV-19 5CLI 1 REMARK REVDAT 2 20-SEP-17 5CLI 1 REMARK REVDAT 1 27-JUL-16 5CLI 0 JRNL AUTH K.L.SULLIVAN,S.TRANCHIMAND,T.J.KAPPOCK JRNL TITL STRUCTURE OF A SINGLE TRYPTOPHAN MUTANT OF ACETOBACTER ACETI JRNL TITL 2 PURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.Z.CONSTANTINE,C.M.STARKS,C.P.MILL,A.E.RANSOME, REMARK 1 AUTH 2 S.J.KARPOWICZ,J.A.FRANCOIS,R.A.GOODMAN,T.J.KAPPOCK REMARK 1 TITL BIOCHEMICAL AND STRUCTURAL STUDIES OF REMARK 1 TITL 2 N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE FROM THE REMARK 1 TITL 3 ACIDOPHILIC BACTERIUM ACETOBACTER ACETI. REMARK 1 REF BIOCHEMISTRY V. 45 8193 2006 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 16819818 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 30063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4652 - 4.0492 1.00 3586 0 0.1345 0.0000 REMARK 3 2 4.0492 - 3.2147 1.00 3258 149 0.1170 0.1509 REMARK 3 3 3.2147 - 2.8085 1.00 3231 153 0.1283 0.1758 REMARK 3 4 2.8085 - 2.5518 1.00 3193 163 0.1264 0.1610 REMARK 3 5 2.5518 - 2.3689 1.00 3187 164 0.1334 0.1512 REMARK 3 6 2.3689 - 2.2293 1.00 3173 162 0.1390 0.1814 REMARK 3 7 2.2293 - 2.1177 0.98 3080 167 0.1540 0.1907 REMARK 3 8 2.1177 - 2.0255 0.98 3085 166 0.1704 0.2246 REMARK 3 9 2.0255 - 1.9475 0.95 2989 157 0.1955 0.2290 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2500 REMARK 3 ANGLE : 1.177 3444 REMARK 3 CHIRALITY : 0.049 417 REMARK 3 PLANARITY : 0.006 441 REMARK 3 DIHEDRAL : 12.260 921 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5204 29.1406 35.7512 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: 0.1532 REMARK 3 T33: 0.2348 T12: 0.0173 REMARK 3 T13: -0.0033 T23: -0.0583 REMARK 3 L TENSOR REMARK 3 L11: 1.4763 L22: 0.9453 REMARK 3 L33: 4.7263 L12: -1.1809 REMARK 3 L13: 0.5296 L23: -0.4559 REMARK 3 S TENSOR REMARK 3 S11: 0.1596 S12: -0.2300 S13: 0.4280 REMARK 3 S21: 0.4217 S22: -0.0998 S23: 0.2371 REMARK 3 S31: -0.1773 S32: -0.0365 S33: 0.0461 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9875 22.9182 40.8996 REMARK 3 T TENSOR REMARK 3 T11: 0.2087 T22: 0.2183 REMARK 3 T33: 0.1255 T12: 0.0138 REMARK 3 T13: -0.0011 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 8.4013 L22: 8.4245 REMARK 3 L33: 1.0987 L12: 6.5804 REMARK 3 L13: -0.2554 L23: -0.2962 REMARK 3 S TENSOR REMARK 3 S11: 0.1759 S12: -0.5122 S13: 0.0378 REMARK 3 S21: 0.3079 S22: -0.2589 S23: -0.0136 REMARK 3 S31: 0.1065 S32: -0.0339 S33: 0.0761 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1992 27.4612 35.9246 REMARK 3 T TENSOR REMARK 3 T11: 0.1870 T22: 0.1728 REMARK 3 T33: 0.1521 T12: 0.0072 REMARK 3 T13: 0.0073 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 7.8675 L22: 3.9218 REMARK 3 L33: 0.0855 L12: 4.7125 REMARK 3 L13: 0.7109 L23: 0.4278 REMARK 3 S TENSOR REMARK 3 S11: -0.0108 S12: -0.1401 S13: 0.1531 REMARK 3 S21: 0.0939 S22: -0.0062 S23: -0.0416 REMARK 3 S31: -0.0012 S32: 0.0081 S33: -0.0036 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4838 30.2811 28.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.1542 REMARK 3 T33: 0.2072 T12: 0.0419 REMARK 3 T13: -0.0170 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 6.9518 L22: 6.3532 REMARK 3 L33: 0.6822 L12: 4.6271 REMARK 3 L13: -1.6303 L23: -2.0760 REMARK 3 S TENSOR REMARK 3 S11: -0.2082 S12: 0.2402 S13: 0.8085 REMARK 3 S21: -0.0164 S22: 0.2556 S23: 0.6246 REMARK 3 S31: -0.1888 S32: -0.1895 S33: -0.0650 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7458 26.6634 26.9292 REMARK 3 T TENSOR REMARK 3 T11: 0.1273 T22: 0.1478 REMARK 3 T33: 0.1624 T12: 0.0107 REMARK 3 T13: -0.0032 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.1293 L22: 5.1434 REMARK 3 L33: 2.6769 L12: -0.2408 REMARK 3 L13: 0.1442 L23: -0.4931 REMARK 3 S TENSOR REMARK 3 S11: -0.0185 S12: 0.0501 S13: 0.3115 REMARK 3 S21: -0.1500 S22: -0.1076 S23: 0.1388 REMARK 3 S31: -0.0958 S32: -0.0979 S33: 0.1043 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4657 5.8371 34.4024 REMARK 3 T TENSOR REMARK 3 T11: 0.2215 T22: 0.2095 REMARK 3 T33: 0.1741 T12: -0.0534 REMARK 3 T13: -0.0438 T23: 0.0545 REMARK 3 L TENSOR REMARK 3 L11: 4.7614 L22: 6.8793 REMARK 3 L33: 6.6731 L12: -2.3074 REMARK 3 L13: -4.2756 L23: -1.9679 REMARK 3 S TENSOR REMARK 3 S11: 0.1268 S12: -0.8525 S13: -0.4569 REMARK 3 S21: 0.7172 S22: -0.2831 S23: -0.5719 REMARK 3 S31: 0.1764 S32: 0.2938 S33: 0.3200 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9663 21.8473 26.4886 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.1294 REMARK 3 T33: 0.1336 T12: 0.0231 REMARK 3 T13: 0.0042 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 2.4160 L22: 2.7738 REMARK 3 L33: 1.3877 L12: 1.7391 REMARK 3 L13: 0.4921 L23: 0.6183 REMARK 3 S TENSOR REMARK 3 S11: -0.0313 S12: 0.0239 S13: 0.1251 REMARK 3 S21: -0.0012 S22: -0.0248 S23: 0.0422 REMARK 3 S31: -0.0693 S32: 0.0035 S33: 0.0603 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9224 32.1330 35.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.1867 REMARK 3 T33: 0.1861 T12: -0.0197 REMARK 3 T13: -0.0339 T23: -0.0402 REMARK 3 L TENSOR REMARK 3 L11: 1.4198 L22: 6.8770 REMARK 3 L33: 0.8322 L12: -2.7952 REMARK 3 L13: 0.4776 L23: -1.8386 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: 0.1052 S13: 0.0323 REMARK 3 S21: -0.1208 S22: -0.0371 S23: -0.0118 REMARK 3 S31: 0.0015 S32: 0.1861 S33: -0.0138 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1125 14.5733 43.0942 REMARK 3 T TENSOR REMARK 3 T11: 0.3077 T22: 0.2050 REMARK 3 T33: 0.2223 T12: -0.0076 REMARK 3 T13: -0.0798 T23: -0.0689 REMARK 3 L TENSOR REMARK 3 L11: 7.7949 L22: 3.8090 REMARK 3 L33: 5.6906 L12: -5.3848 REMARK 3 L13: 0.1189 L23: 0.5671 REMARK 3 S TENSOR REMARK 3 S11: -0.0367 S12: -0.2681 S13: -0.0913 REMARK 3 S21: 0.8002 S22: 0.1126 S23: -0.3006 REMARK 3 S31: 0.5176 S32: 0.1728 S33: -0.1025 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1411 28.0394 11.5055 REMARK 3 T TENSOR REMARK 3 T11: 0.2519 T22: 0.2090 REMARK 3 T33: 0.1403 T12: -0.0317 REMARK 3 T13: 0.0077 T23: 0.0743 REMARK 3 L TENSOR REMARK 3 L11: 2.3936 L22: 0.0059 REMARK 3 L33: 0.9577 L12: 0.0947 REMARK 3 L13: 0.0361 L23: -0.0441 REMARK 3 S TENSOR REMARK 3 S11: 0.0918 S12: 0.2279 S13: 0.0948 REMARK 3 S21: -0.5623 S22: -0.0193 S23: -0.1043 REMARK 3 S31: -0.1141 S32: 0.1487 S33: -0.0167 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7629 21.9886 6.0129 REMARK 3 T TENSOR REMARK 3 T11: 0.2815 T22: 0.2699 REMARK 3 T33: 0.1468 T12: -0.0305 REMARK 3 T13: -0.0105 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 4.0090 L22: 7.0907 REMARK 3 L33: 2.6185 L12: -3.3660 REMARK 3 L13: -1.3160 L23: 2.2679 REMARK 3 S TENSOR REMARK 3 S11: 0.1096 S12: 0.4258 S13: 0.0435 REMARK 3 S21: -0.5688 S22: -0.1339 S23: 0.1745 REMARK 3 S31: -0.0625 S32: -0.3260 S33: 0.0262 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1829 24.7169 17.5195 REMARK 3 T TENSOR REMARK 3 T11: 0.1866 T22: 0.1563 REMARK 3 T33: 0.1498 T12: -0.0278 REMARK 3 T13: 0.0099 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 2.1502 L22: 1.3902 REMARK 3 L33: 1.4808 L12: -0.0973 REMARK 3 L13: 0.3643 L23: -0.2648 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.1524 S13: 0.1410 REMARK 3 S21: -0.1303 S22: -0.0593 S23: -0.2027 REMARK 3 S31: -0.0626 S32: 0.1625 S33: 0.0409 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7973 4.7282 12.0950 REMARK 3 T TENSOR REMARK 3 T11: 0.3036 T22: 0.2507 REMARK 3 T33: 0.1905 T12: 0.0363 REMARK 3 T13: -0.0105 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 5.2816 L22: 3.9069 REMARK 3 L33: 5.3719 L12: 2.7824 REMARK 3 L13: 0.3157 L23: 1.5836 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: 0.8114 S13: -0.4765 REMARK 3 S21: -1.0600 S22: -0.0063 S23: 0.2758 REMARK 3 S31: 0.3648 S32: -0.1125 S33: 0.0748 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3120 21.7556 20.3793 REMARK 3 T TENSOR REMARK 3 T11: 0.0934 T22: 0.1374 REMARK 3 T33: 0.1051 T12: -0.0204 REMARK 3 T13: 0.0173 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.5241 L22: 4.0810 REMARK 3 L33: 1.9500 L12: -0.9646 REMARK 3 L13: 0.1420 L23: 0.0957 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: 0.0817 S13: 0.1221 REMARK 3 S21: -0.1137 S22: 0.0048 S23: 0.0389 REMARK 3 S31: -0.0909 S32: -0.0262 S33: -0.0064 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9135 35.1003 12.0708 REMARK 3 T TENSOR REMARK 3 T11: 0.3402 T22: 0.2888 REMARK 3 T33: 0.3303 T12: 0.0200 REMARK 3 T13: -0.0467 T23: 0.1263 REMARK 3 L TENSOR REMARK 3 L11: 7.3145 L22: 3.4881 REMARK 3 L33: 1.5563 L12: 3.9495 REMARK 3 L13: 2.8450 L23: 2.3166 REMARK 3 S TENSOR REMARK 3 S11: -0.2324 S12: 0.0767 S13: 0.5566 REMARK 3 S21: 0.0266 S22: 0.3098 S23: 0.5927 REMARK 3 S31: -0.3513 S32: -0.2132 S33: -0.0725 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.5685 19.6314 3.8564 REMARK 3 T TENSOR REMARK 3 T11: 0.3333 T22: 0.3819 REMARK 3 T33: 0.2668 T12: -0.0463 REMARK 3 T13: -0.0881 T23: 0.1107 REMARK 3 L TENSOR REMARK 3 L11: 5.0919 L22: 6.7567 REMARK 3 L33: 8.2401 L12: 5.7577 REMARK 3 L13: 3.3137 L23: 4.9691 REMARK 3 S TENSOR REMARK 3 S11: -0.2386 S12: 0.4056 S13: 0.2635 REMARK 3 S21: -0.4326 S22: 0.5913 S23: 0.6741 REMARK 3 S31: 0.1330 S32: -0.2693 S33: -0.1819 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CLI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000209028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 111 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30063 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.948 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.49400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1U11 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 0.1M TRIS, 30% REMARK 280 (W/V) PEG 4000 (SOAKED AT PH 7), PH 8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 49.59950 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 82.19450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 49.59950 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 82.19450 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 49.59950 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 82.19450 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 49.59950 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 82.19450 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.59950 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 82.19450 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.59950 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 82.19450 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 49.59950 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 82.19450 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 49.59950 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 49.59950 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 82.19450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 461 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 483 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 LEU A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 GLU A 15 REMARK 465 ASP A 16 REMARK 465 LYS A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 180 REMARK 465 ASP A 181 REMARK 465 LYS A 182 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 THR B 4 REMARK 465 ALA B 5 REMARK 465 PRO B 6 REMARK 465 LEU B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 ALA B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 GLU B 15 REMARK 465 ASP B 16 REMARK 465 LYS B 17 REMARK 465 ALA B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 180 REMARK 465 ASP B 181 REMARK 465 LYS B 182 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N6 AIR A 200 O HOH A 301 1.89 REMARK 500 C4 AIR A 200 O HOH A 302 1.97 REMARK 500 O HOH B 272 O HOH B 336 2.05 REMARK 500 O HOH A 418 O HOH A 470 2.11 REMARK 500 O HOH A 386 O HOH A 456 2.16 REMARK 500 N3 AIR A 200 O HOH A 302 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 87 79.56 -69.94 REMARK 500 GLN A 123 32.89 -86.17 REMARK 500 GLN B 123 36.43 -84.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 508 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 509 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 510 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH B 395 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 396 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B 397 DISTANCE = 7.93 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AIR A 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FWJ RELATED DB: PDB REMARK 900 PREVIOUS REFINEMENT OF THE SAME DATASET. REMARK 900 RELATED ID: 5CLF RELATED DB: PDB REMARK 900 RELATED ID: 5CLG RELATED DB: PDB REMARK 900 RELATED ID: 5CLH RELATED DB: PDB REMARK 900 RELATED ID: 5CLJ RELATED DB: PDB DBREF1 5CLI A 1 182 UNP A0A063X4U8_ACEAC DBREF2 5CLI A A0A063X4U8 1 182 DBREF1 5CLI B 1 182 UNP A0A063X4U8_ACEAC DBREF2 5CLI B A0A063X4U8 1 182 SEQADV 5CLI MET A 0 UNP A0A063X4U INITIATING METHIONINE SEQADV 5CLI MET B 0 UNP A0A063X4U INITIATING METHIONINE SEQRES 1 A 183 MET MET SER GLU THR ALA PRO LEU PRO SER ALA SER SER SEQRES 2 A 183 ALA LEU GLU ASP LYS ALA ALA SER ALA PRO VAL VAL GLY SEQRES 3 A 183 ILE ILE MET GLY SER GLN SER ASP TRP GLU THR MET ARG SEQRES 4 A 183 HIS ALA ASP ALA LEU LEU THR GLU LEU GLU ILE PRO HIS SEQRES 5 A 183 GLU THR LEU ILE VAL SER ALA HIS ARG THR PRO ASP ARG SEQRES 6 A 183 LEU ALA ASP TYR ALA ARG THR ALA ALA GLU ARG GLY LEU SEQRES 7 A 183 ASN VAL ILE ILE ALA GLY ALA GLY GLY ALA ALA HIS LEU SEQRES 8 A 183 PRO GLY MET CYS ALA ALA TRP THR ARG LEU PRO VAL LEU SEQRES 9 A 183 GLY VAL PRO VAL GLU SER ARG ALA LEU LYS GLY MET ASP SEQRES 10 A 183 SER LEU LEU SER ILE VAL GLN MET PRO GLY GLY VAL PRO SEQRES 11 A 183 VAL GLY THR LEU ALA ILE GLY ALA SER GLY ALA LYS ASN SEQRES 12 A 183 ALA ALA LEU LEU ALA ALA SER ILE LEU ALA LEU TYR ASN SEQRES 13 A 183 PRO ALA LEU ALA ALA ARG LEU GLU THR TRP ARG ALA LEU SEQRES 14 A 183 GLN THR ALA SER VAL PRO ASN SER PRO ILE THR GLU ASP SEQRES 15 A 183 LYS SEQRES 1 B 183 MET MET SER GLU THR ALA PRO LEU PRO SER ALA SER SER SEQRES 2 B 183 ALA LEU GLU ASP LYS ALA ALA SER ALA PRO VAL VAL GLY SEQRES 3 B 183 ILE ILE MET GLY SER GLN SER ASP TRP GLU THR MET ARG SEQRES 4 B 183 HIS ALA ASP ALA LEU LEU THR GLU LEU GLU ILE PRO HIS SEQRES 5 B 183 GLU THR LEU ILE VAL SER ALA HIS ARG THR PRO ASP ARG SEQRES 6 B 183 LEU ALA ASP TYR ALA ARG THR ALA ALA GLU ARG GLY LEU SEQRES 7 B 183 ASN VAL ILE ILE ALA GLY ALA GLY GLY ALA ALA HIS LEU SEQRES 8 B 183 PRO GLY MET CYS ALA ALA TRP THR ARG LEU PRO VAL LEU SEQRES 9 B 183 GLY VAL PRO VAL GLU SER ARG ALA LEU LYS GLY MET ASP SEQRES 10 B 183 SER LEU LEU SER ILE VAL GLN MET PRO GLY GLY VAL PRO SEQRES 11 B 183 VAL GLY THR LEU ALA ILE GLY ALA SER GLY ALA LYS ASN SEQRES 12 B 183 ALA ALA LEU LEU ALA ALA SER ILE LEU ALA LEU TYR ASN SEQRES 13 B 183 PRO ALA LEU ALA ALA ARG LEU GLU THR TRP ARG ALA LEU SEQRES 14 B 183 GLN THR ALA SER VAL PRO ASN SER PRO ILE THR GLU ASP SEQRES 15 B 183 LYS HET AIR A 200 19 HETNAM AIR 5-AMINOIMIDAZOLE RIBONUCLEOTIDE FORMUL 3 AIR C8 H14 N3 O7 P FORMUL 4 HOH *407(H2 O) HELIX 1 AA1 SER A 30 SER A 32 5 3 HELIX 2 AA2 ASP A 33 LEU A 47 1 15 HELIX 3 AA3 THR A 61 ALA A 72 1 12 HELIX 4 AA4 HIS A 89 THR A 98 1 10 HELIX 5 AA5 GLY A 114 GLN A 123 1 10 HELIX 6 AA6 GLY A 136 ALA A 152 1 17 HELIX 7 AA7 ASN A 155 VAL A 173 1 19 HELIX 8 AA8 SER B 30 SER B 32 5 3 HELIX 9 AA9 ASP B 33 LEU B 47 1 15 HELIX 10 AB1 THR B 61 ALA B 72 1 12 HELIX 11 AB2 HIS B 89 THR B 98 1 10 HELIX 12 AB3 GLY B 114 GLN B 123 1 10 HELIX 13 AB4 GLY B 136 LEU B 153 1 18 HELIX 14 AB5 ASN B 155 SER B 172 1 18 SHEET 1 AA1 5 HIS A 51 ILE A 55 0 SHEET 2 AA1 5 VAL A 24 MET A 28 1 N ILE A 26 O GLU A 52 SHEET 3 AA1 5 VAL A 79 ALA A 84 1 O ILE A 81 N GLY A 25 SHEET 4 AA1 5 VAL A 102 PRO A 106 1 O LEU A 103 N ILE A 80 SHEET 5 AA1 5 GLY A 131 THR A 132 1 O GLY A 131 N GLY A 104 SHEET 1 AA2 5 HIS B 51 ILE B 55 0 SHEET 2 AA2 5 VAL B 24 MET B 28 1 N ILE B 26 O GLU B 52 SHEET 3 AA2 5 VAL B 79 GLY B 85 1 O ILE B 81 N GLY B 25 SHEET 4 AA2 5 VAL B 102 VAL B 107 1 O LEU B 103 N ALA B 82 SHEET 5 AA2 5 GLY B 131 THR B 132 1 O GLY B 131 N VAL B 102 SITE 1 AC1 20 GLY A 29 SER A 30 SER A 32 ASP A 33 SITE 2 AC1 20 SER A 57 HIS A 59 ARG A 60 ALA A 84 SITE 3 AC1 20 GLY A 85 ALA A 87 HOH A 301 HOH A 302 SITE 4 AC1 20 HOH A 316 HOH A 318 HOH A 328 HOH A 342 SITE 5 AC1 20 HOH A 371 HOH A 376 HOH A 390 PRO B 125 CRYST1 99.199 99.199 164.389 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010081 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010081 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006083 0.00000