HEADER MEMBRANE PROTEIN 16-JUL-15 5CMC TITLE MNEMIOPSIS LEIDYI ML032222A IGLUR LBD E423S MUTANT GLYCINE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ML032222A IGLUR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MNEMIOPSIS LEIDYI; SOURCE 3 ORGANISM_COMMON: SEA WALNUT; SOURCE 4 ORGANISM_TAXID: 27923; SOURCE 5 GENE: ML032222A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI B(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22 KEYWDS MEMBRANE PROTEIN, GLUTAMATE RECEPTOR, ION CHANNEL EXPDTA X-RAY DIFFRACTION AUTHOR M.L.MAYER,A.THOMAS REVDAT 4 27-SEP-23 5CMC 1 JRNL REMARK REVDAT 3 16-NOV-16 5CMC 1 JRNL REVDAT 2 09-NOV-16 5CMC 1 JRNL REVDAT 1 20-JUL-16 5CMC 0 JRNL AUTH A.YU,R.ALBERSTEIN,A.THOMAS,A.ZIMMET,R.GREY,M.L.MAYER,A.Y.LAU JRNL TITL MOLECULAR LOCK REGULATES BINDING OF GLYCINE TO A PRIMITIVE JRNL TITL 2 NMDA RECEPTOR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 E6786 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 27791085 JRNL DOI 10.1073/PNAS.1607010113 REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1760 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.750 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 273855 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.136 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 13886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.1271 - 3.9765 0.98 8794 587 0.1385 0.1463 REMARK 3 2 3.9765 - 3.1567 1.00 9040 462 0.1349 0.1542 REMARK 3 3 3.1567 - 2.7578 1.00 9027 496 0.1451 0.1507 REMARK 3 4 2.7578 - 2.5057 1.00 9024 467 0.1415 0.1679 REMARK 3 5 2.5057 - 2.3261 1.00 9089 430 0.1381 0.1778 REMARK 3 6 2.3261 - 2.1890 1.00 8899 479 0.1323 0.1402 REMARK 3 7 2.1890 - 2.0794 0.99 9085 437 0.1280 0.1525 REMARK 3 8 2.0794 - 1.9889 0.99 8962 474 0.1294 0.1528 REMARK 3 9 1.9889 - 1.9123 0.99 8993 451 0.1339 0.1595 REMARK 3 10 1.9123 - 1.8463 0.99 8949 480 0.1390 0.1577 REMARK 3 11 1.8463 - 1.7886 0.99 8959 493 0.1328 0.1533 REMARK 3 12 1.7886 - 1.7375 0.98 8862 458 0.1317 0.1741 REMARK 3 13 1.7375 - 1.6917 0.98 8817 465 0.1307 0.1718 REMARK 3 14 1.6917 - 1.6504 0.98 8901 489 0.1171 0.1487 REMARK 3 15 1.6504 - 1.6129 0.97 8759 475 0.1176 0.1559 REMARK 3 16 1.6129 - 1.5786 0.98 8824 445 0.1197 0.1506 REMARK 3 17 1.5786 - 1.5470 0.97 8822 493 0.1182 0.1511 REMARK 3 18 1.5470 - 1.5178 0.97 8715 469 0.1193 0.1512 REMARK 3 19 1.5178 - 1.4907 0.97 8767 461 0.1203 0.1592 REMARK 3 20 1.4907 - 1.4654 0.96 8672 484 0.1201 0.1519 REMARK 3 21 1.4654 - 1.4418 0.97 8757 451 0.1229 0.1610 REMARK 3 22 1.4418 - 1.4196 0.96 8696 462 0.1257 0.1788 REMARK 3 23 1.4196 - 1.3987 0.96 8624 463 0.1330 0.1778 REMARK 3 24 1.3987 - 1.3790 0.95 8683 462 0.1357 0.1753 REMARK 3 25 1.3790 - 1.3604 0.96 8586 461 0.1376 0.1666 REMARK 3 26 1.3604 - 1.3427 0.94 8575 458 0.1414 0.1718 REMARK 3 27 1.3427 - 1.3260 0.94 8449 449 0.1393 0.1720 REMARK 3 28 1.3260 - 1.3100 0.93 8405 445 0.1467 0.1915 REMARK 3 29 1.3100 - 1.2947 0.83 7438 407 0.1541 0.1674 REMARK 3 30 1.2947 - 1.2802 0.65 5796 333 0.1652 0.2211 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.027 4353 REMARK 3 ANGLE : 1.267 5882 REMARK 3 CHIRALITY : 0.074 621 REMARK 3 PLANARITY : 0.007 778 REMARK 3 DIHEDRAL : 13.060 1609 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CMC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 144111 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.32300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4YKI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR: 24% PEG 8K, 100 MM REMARK 280 CACODYLATE, 150 MM MGS04. PROTEIN BUFFER: 150 MM NACL, 10 MM REMARK 280 HEPES, PH 7.0, 0.5 MM EDTA, 25 MM GLYCINE, PH 6.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 61.56900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 ASN A 252 REMARK 465 SER A 253 REMARK 465 VAL A 254 REMARK 465 CYS A 255 REMARK 465 SER A 256 REMARK 465 SER B 256 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 110 MG MG B 302 1.23 REMARK 500 OD1 ASP B 110 OE1 GLU B 213 1.87 REMARK 500 OD1 ASP A 110 OE1 GLU A 213 2.01 REMARK 500 NH2 ARG A 236 O HOH A 401 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 213 CB GLU A 213 CG 0.120 REMARK 500 ASP B 110 CB ASP B 110 CG 0.145 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 213 OE1 - CD - OE2 ANGL. DEV. = 10.6 DEGREES REMARK 500 ASP B 110 CB - CG - OD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 GLU B 213 OE1 - CD - OE2 ANGL. DEV. = 10.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 17 81.88 -161.44 REMARK 500 ASP A 134 15.84 -148.27 REMARK 500 ASP A 170 -179.95 -173.26 REMARK 500 ASP A 187 -140.73 -151.14 REMARK 500 GLN A 210 138.93 68.88 REMARK 500 ASN B 4 -168.63 -116.39 REMARK 500 SER B 17 82.38 -161.39 REMARK 500 THR B 123 -167.59 -127.09 REMARK 500 ASP B 187 -137.65 -148.48 REMARK 500 GLU B 207 -61.91 -139.93 REMARK 500 GLU B 208 -14.41 112.24 REMARK 500 PHE B 209 136.39 73.01 REMARK 500 GLN B 210 132.08 63.39 REMARK 500 ASN B 252 -170.54 55.14 REMARK 500 SER B 253 126.38 178.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 773 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH B 774 DISTANCE = 6.91 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD1 REMARK 620 2 GLU A 213 OE1 56.2 REMARK 620 3 GLU A 213 OE2 110.0 67.7 REMARK 620 4 ASP B 110 OD2 67.8 111.4 102.0 REMARK 620 5 GLU B 213 OE1 160.4 133.4 89.3 112.8 REMARK 620 6 GLU B 213 OE2 103.5 75.1 98.7 159.2 68.9 REMARK 620 7 HOH B 401 O 83.5 124.8 166.1 79.8 77.5 80.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YKI RELATED DB: PDB REMARK 900 WILD TYPE ML032222A LIGAND BINDING DOMAIN REMARK 900 RELATED ID: 5CMB RELATED DB: PDB REMARK 900 R703K MUTANT DBREF 5CMC A 1 256 PDB 5CMC 5CMC 1 256 DBREF 5CMC B 1 256 PDB 5CMC 5CMC 1 256 SEQRES 1 A 256 GLY SER LYS ASN LEU ILE GLY ARG HIS LEU ARG LEU GLY SEQRES 2 A 256 SER VAL GLU SER GLN PRO PHE MET PHE PHE ALA THR GLU SEQRES 3 A 256 GLY CYS GLU GLY ASN ASP CYS TRP SER GLY MET VAL ASN SEQRES 4 A 256 ASP MET VAL VAL LYS LEU SER GLU ASP LEU GLY PHE THR SEQRES 5 A 256 TYR GLU TYR ILE GLN PRO ASP ASP ARG LYS PHE GLY ALA SEQRES 6 A 256 LEU ASN LYS THR THR ASN GLU TRP ASN GLY MET ILE ARG SEQRES 7 A 256 ASP LEU LEU ASP ASP LYS THR ASP MET ILE ALA ILE ASP SEQRES 8 A 256 LEU SER THR ASN SER ALA ARG LYS SER ALA ILE ASP TYR SEQRES 9 A 256 SER PHE PRO PHE MET ASP ALA GLY ILE LYS ALA VAL VAL SEQRES 10 A 256 LYS GLY GLU GLY THR THR LEU ASN GLN VAL LEU GLU LEU SEQRES 11 A 256 LEU ASP GLN ASP LYS TYR LYS TRP GLY VAL ILE GLY SER SEQRES 12 A 256 ARG HIS PRO GLU THR LEU LEU LYS THR HIS ARG ASP SER SEQRES 13 A 256 ARG TYR SER ARG LEU VAL ASP GLU GLY VAL GLU LEU LYS SEQRES 14 A 256 ASP LEU ASN HIS ALA ILE GLU THR LEU ARG GLY GLY LEU SEQRES 15 A 256 PHE VAL PHE ILE ASP GLU GLY PRO VAL LEU ALA HIS ASN SEQRES 16 A 256 LEU ILE SER ASP CYS ASP VAL PHE SER VAL GLY GLU GLU SEQRES 17 A 256 PHE GLN SER PHE GLU TYR ALA PHE GLY LEU PRO LYS ASP SEQRES 18 A 256 SER PRO TYR LYS SER LEU ILE ASP SER HIS LEU LEU LYS SEQRES 19 A 256 PHE ARG GLU GLU GLY PHE ILE ASP ILE LEU TRP GLU LYS SEQRES 20 A 256 TRP SER SER GLY ASN SER VAL CYS SER SEQRES 1 B 256 GLY SER LYS ASN LEU ILE GLY ARG HIS LEU ARG LEU GLY SEQRES 2 B 256 SER VAL GLU SER GLN PRO PHE MET PHE PHE ALA THR GLU SEQRES 3 B 256 GLY CYS GLU GLY ASN ASP CYS TRP SER GLY MET VAL ASN SEQRES 4 B 256 ASP MET VAL VAL LYS LEU SER GLU ASP LEU GLY PHE THR SEQRES 5 B 256 TYR GLU TYR ILE GLN PRO ASP ASP ARG LYS PHE GLY ALA SEQRES 6 B 256 LEU ASN LYS THR THR ASN GLU TRP ASN GLY MET ILE ARG SEQRES 7 B 256 ASP LEU LEU ASP ASP LYS THR ASP MET ILE ALA ILE ASP SEQRES 8 B 256 LEU SER THR ASN SER ALA ARG LYS SER ALA ILE ASP TYR SEQRES 9 B 256 SER PHE PRO PHE MET ASP ALA GLY ILE LYS ALA VAL VAL SEQRES 10 B 256 LYS GLY GLU GLY THR THR LEU ASN GLN VAL LEU GLU LEU SEQRES 11 B 256 LEU ASP GLN ASP LYS TYR LYS TRP GLY VAL ILE GLY SER SEQRES 12 B 256 ARG HIS PRO GLU THR LEU LEU LYS THR HIS ARG ASP SER SEQRES 13 B 256 ARG TYR SER ARG LEU VAL ASP GLU GLY VAL GLU LEU LYS SEQRES 14 B 256 ASP LEU ASN HIS ALA ILE GLU THR LEU ARG GLY GLY LEU SEQRES 15 B 256 PHE VAL PHE ILE ASP GLU GLY PRO VAL LEU ALA HIS ASN SEQRES 16 B 256 LEU ILE SER ASP CYS ASP VAL PHE SER VAL GLY GLU GLU SEQRES 17 B 256 PHE GLN SER PHE GLU TYR ALA PHE GLY LEU PRO LYS ASP SEQRES 18 B 256 SER PRO TYR LYS SER LEU ILE ASP SER HIS LEU LEU LYS SEQRES 19 B 256 PHE ARG GLU GLU GLY PHE ILE ASP ILE LEU TRP GLU LYS SEQRES 20 B 256 TRP SER SER GLY ASN SER VAL CYS SER HET GLY A 301 10 HET GLY B 301 10 HET MG B 302 1 HET SO4 B 303 5 HETNAM GLY GLYCINE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION FORMUL 3 GLY 2(C2 H5 N O2) FORMUL 5 MG MG 2+ FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *663(H2 O) HELIX 1 AA1 GLU A 29 ASP A 32 5 4 HELIX 2 AA2 GLY A 36 GLY A 50 1 15 HELIX 3 AA3 ASN A 74 ASP A 82 1 9 HELIX 4 AA4 ASN A 95 SER A 100 1 6 HELIX 5 AA5 GLN A 126 GLN A 133 5 8 HELIX 6 AA6 ARG A 144 HIS A 153 1 10 HELIX 7 AA7 SER A 156 GLY A 165 1 10 HELIX 8 AA8 ASP A 170 GLY A 180 1 11 HELIX 9 AA9 GLY A 189 LEU A 196 1 8 HELIX 10 AB1 TYR A 224 GLU A 238 1 15 HELIX 11 AB2 GLY A 239 SER A 249 1 11 HELIX 12 AB3 GLU B 29 ASP B 32 5 4 HELIX 13 AB4 GLY B 36 GLY B 50 1 15 HELIX 14 AB5 ASN B 74 ASP B 82 1 9 HELIX 15 AB6 ASN B 95 SER B 100 1 6 HELIX 16 AB7 GLN B 126 GLN B 133 5 8 HELIX 17 AB8 ARG B 144 HIS B 153 1 10 HELIX 18 AB9 SER B 156 GLY B 165 1 10 HELIX 19 AC1 ASP B 170 GLY B 180 1 11 HELIX 20 AC2 GLY B 189 LEU B 196 1 8 HELIX 21 AC3 TYR B 224 GLU B 238 1 15 HELIX 22 AC4 GLY B 239 SER B 249 1 11 SHEET 1 AA1 5 THR A 52 ILE A 56 0 SHEET 2 AA1 5 HIS A 9 GLY A 13 1 N LEU A 12 O GLU A 54 SHEET 3 AA1 5 MET A 87 SER A 93 1 O MET A 87 N GLY A 13 SHEET 4 AA1 5 VAL A 202 LEU A 218 -1 O GLY A 217 N ILE A 88 SHEET 5 AA1 5 ASP A 103 TYR A 104 -1 N ASP A 103 O LEU A 218 SHEET 1 AA2 8 THR A 52 ILE A 56 0 SHEET 2 AA2 8 HIS A 9 GLY A 13 1 N LEU A 12 O GLU A 54 SHEET 3 AA2 8 MET A 87 SER A 93 1 O MET A 87 N GLY A 13 SHEET 4 AA2 8 VAL A 202 LEU A 218 -1 O GLY A 217 N ILE A 88 SHEET 5 AA2 8 MET A 109 LYS A 118 -1 N ALA A 115 O VAL A 205 SHEET 6 AA2 8 PHE A 183 GLU A 188 -1 O ASP A 187 N LYS A 114 SHEET 7 AA2 8 LYS A 137 ILE A 141 1 N LYS A 137 O VAL A 184 SHEET 8 AA2 8 VAL A 166 LEU A 168 1 O VAL A 166 N TRP A 138 SHEET 1 AA3 2 PHE A 22 PHE A 23 0 SHEET 2 AA3 2 TRP A 34 SER A 35 -1 O SER A 35 N PHE A 22 SHEET 1 AA4 2 LEU A 66 ASN A 67 0 SHEET 2 AA4 2 GLU A 72 TRP A 73 -1 O GLU A 72 N ASN A 67 SHEET 1 AA5 5 THR B 52 ILE B 56 0 SHEET 2 AA5 5 HIS B 9 GLY B 13 1 N LEU B 12 O GLU B 54 SHEET 3 AA5 5 MET B 87 SER B 93 1 O MET B 87 N GLY B 13 SHEET 4 AA5 5 PHE B 212 LEU B 218 -1 O GLY B 217 N ILE B 88 SHEET 5 AA5 5 ASP B 103 TYR B 104 -1 N ASP B 103 O LEU B 218 SHEET 1 AA6 5 THR B 52 ILE B 56 0 SHEET 2 AA6 5 HIS B 9 GLY B 13 1 N LEU B 12 O GLU B 54 SHEET 3 AA6 5 MET B 87 SER B 93 1 O MET B 87 N GLY B 13 SHEET 4 AA6 5 PHE B 212 LEU B 218 -1 O GLY B 217 N ILE B 88 SHEET 5 AA6 5 MET B 109 ALA B 111 -1 N MET B 109 O TYR B 214 SHEET 1 AA7 2 PHE B 22 PHE B 23 0 SHEET 2 AA7 2 TRP B 34 SER B 35 -1 O SER B 35 N PHE B 22 SHEET 1 AA8 2 LEU B 66 ASN B 67 0 SHEET 2 AA8 2 GLU B 72 TRP B 73 -1 O GLU B 72 N ASN B 67 SHEET 1 AA9 5 VAL B 166 LEU B 168 0 SHEET 2 AA9 5 LYS B 137 ILE B 141 1 N TRP B 138 O VAL B 166 SHEET 3 AA9 5 PHE B 183 GLU B 188 1 O VAL B 184 N LYS B 137 SHEET 4 AA9 5 ILE B 113 LYS B 118 -1 N LYS B 114 O ASP B 187 SHEET 5 AA9 5 VAL B 202 VAL B 205 -1 O PHE B 203 N VAL B 117 SSBOND 1 CYS A 28 CYS A 33 1555 1555 2.09 SSBOND 2 CYS B 28 CYS B 33 1555 1555 2.10 SSBOND 3 CYS B 200 CYS B 255 1555 1555 2.03 LINK OD1 ASP A 110 MG MG B 302 1555 1555 1.96 LINK OE1 GLU A 213 MG MG B 302 1555 1555 2.26 LINK OE2 GLU A 213 MG MG B 302 1555 1555 1.77 LINK OD2 ASP B 110 MG MG B 302 1555 1555 2.70 LINK OE1 GLU B 213 MG MG B 302 1555 1555 2.16 LINK OE2 GLU B 213 MG MG B 302 1555 1555 1.87 LINK MG MG B 302 O HOH B 401 1555 1555 2.18 CISPEP 1 GLN A 18 PRO A 19 0 6.36 CISPEP 2 SER A 250 GLY A 251 0 -0.14 CISPEP 3 GLN B 18 PRO B 19 0 9.95 SITE 1 AC1 7 PHE A 63 ASP A 91 SER A 93 ARG A 98 SITE 2 AC1 7 ARG A 144 HIS A 145 GLU A 188 SITE 1 AC2 7 PHE B 63 ASP B 91 SER B 93 ARG B 98 SITE 2 AC2 7 ARG B 144 HIS B 145 GLU B 188 SITE 1 AC3 5 ASP A 110 GLU A 213 ASP B 110 GLU B 213 SITE 2 AC3 5 HOH B 401 SITE 1 AC4 4 PHE B 203 SER B 204 HOH B 406 HOH B 550 CRYST1 45.899 123.138 54.507 90.00 111.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021787 0.000000 0.008680 0.00000 SCALE2 0.000000 0.008121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019749 0.00000