HEADER REPLICATION 17-JUL-15 5CNQ TITLE CRYSTAL STRUCTURE OF THE HOLLIDAY JUNCTION-RESOLVING ENZYME GEN1 (WT) TITLE 2 IN COMPLEX WITH PRODUCT DNA, MG2+ AND MN2+ IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEASE-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, UNP RESIDUES 2-465; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: R; COMPND 8 CHAIN: R; COMPND 9 FRAGMENT: R-STEM; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)- COMPND 13 3'); COMPND 14 CHAIN: H; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM; SOURCE 3 ORGANISM_TAXID: 209285; SOURCE 4 GENE: CTHT_0007290; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 562; SOURCE 11 OTHER_DETAILS: DNA OLIGO SYNTHESIS; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562 KEYWDS GEN1, 4-WAY HOLIDAY JUNCTION, RESOLVASE, DNA DAMAGE REPAIR, KEYWDS 2 REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR Y.J.LIU,A.D.J.FREEMAN,A.C.DECLAIS,T.J.WILSON,A.GARTNER,D.M.J.LILLEY REVDAT 4 16-OCT-24 5CNQ 1 REMARK REVDAT 3 10-JAN-24 5CNQ 1 REMARK REVDAT 2 13-JAN-16 5CNQ 1 JRNL REVDAT 1 30-DEC-15 5CNQ 0 JRNL AUTH Y.LIU,A.D.FREEMAN,A.C.DECLAIS,T.J.WILSON,A.GARTNER, JRNL AUTH 2 D.M.LILLEY JRNL TITL CRYSTAL STRUCTURE OF A EUKARYOTIC GEN1 RESOLVING ENZYME JRNL TITL 2 BOUND TO DNA. JRNL REF CELL REP V. 13 2565 2015 JRNL REFN ESSN 2211-1247 JRNL PMID 26686639 JRNL DOI 10.1016/J.CELREP.2015.11.042 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21111 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1084 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2998 - 5.2022 1.00 2640 140 0.2079 0.2548 REMARK 3 2 5.2022 - 4.1298 1.00 2553 116 0.1818 0.1760 REMARK 3 3 4.1298 - 3.6079 1.00 2505 133 0.1831 0.2371 REMARK 3 4 3.6079 - 3.2781 1.00 2506 119 0.2214 0.2863 REMARK 3 5 3.2781 - 3.0432 1.00 2469 138 0.2441 0.2791 REMARK 3 6 3.0432 - 2.8638 1.00 2474 138 0.2650 0.3097 REMARK 3 7 2.8638 - 2.7204 1.00 2425 156 0.2932 0.3374 REMARK 3 8 2.7204 - 2.6020 1.00 2455 144 0.3133 0.3738 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3805 REMARK 3 ANGLE : 0.874 5272 REMARK 3 CHIRALITY : 0.034 584 REMARK 3 PLANARITY : 0.006 580 REMARK 3 DIHEDRAL : 19.692 1457 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CNQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211871. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91376 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21142 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 49.291 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.900 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 19.80 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.9-1692 REMARK 200 STARTING MODEL: 5CO8 REMARK 200 REMARK 200 REMARK: CUBE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG10000, NACL, MAGNESIUM CHLORIDE, PH REMARK 280 7, EVAPORATION, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.87300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.74600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 79.74600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.87300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, R, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 85 REMARK 465 PHE A 86 REMARK 465 LYS A 87 REMARK 465 ARG A 88 REMARK 465 ASN A 89 REMARK 465 ARG A 90 REMARK 465 ARG A 91 REMARK 465 SER A 92 REMARK 465 GLY A 93 REMARK 465 THR A 94 REMARK 465 GLY A 95 REMARK 465 ASN A 96 REMARK 465 GLY A 160 REMARK 465 SER A 161 REMARK 465 LYS A 162 REMARK 465 ASP A 199 REMARK 465 TYR A 200 REMARK 465 LEU A 201 REMARK 465 PRO A 202 REMARK 465 ASP A 203 REMARK 465 ARG A 227 REMARK 465 ILE A 228 REMARK 465 LYS A 229 REMARK 465 ARG A 230 REMARK 465 ALA A 231 REMARK 465 ASP A 232 REMARK 465 LYS A 233 REMARK 465 GLU A 234 REMARK 465 VAL A 343 REMARK 465 SER A 344 REMARK 465 GLY A 345 REMARK 465 PRO A 346 REMARK 465 ARG A 347 REMARK 465 ILE A 348 REMARK 465 ASP A 349 REMARK 465 ASP A 350 REMARK 465 PRO A 351 REMARK 465 ASP A 352 REMARK 465 LEU A 353 REMARK 465 LYS A 354 REMARK 465 LYS A 355 REMARK 465 LYS A 356 REMARK 465 GLN A 401 REMARK 465 VAL A 402 REMARK 465 GLU A 403 REMARK 465 ALA A 404 REMARK 465 PHE A 405 REMARK 465 GLY A 406 REMARK 465 ARG A 407 REMARK 465 SER A 408 REMARK 465 GLY A 409 REMARK 465 LEU A 410 REMARK 465 ALA A 411 REMARK 465 LEU A 412 REMARK 465 ASN A 413 REMARK 465 SER A 414 REMARK 465 ASP A 415 REMARK 465 ASP A 416 REMARK 465 GLU A 417 REMARK 465 PHE A 418 REMARK 465 ASP A 419 REMARK 465 GLU A 420 REMARK 465 ASP A 421 REMARK 465 ILE A 422 REMARK 465 SER A 423 REMARK 465 SER A 424 REMARK 465 SER A 425 REMARK 465 GLN A 426 REMARK 465 LYS A 427 REMARK 465 ALA A 428 REMARK 465 PRO A 429 REMARK 465 LYS A 430 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT R 0 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DT R 0 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT R 0 C7 C6 REMARK 470 DT H 16 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DT H 16 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT H 16 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 269 C - N - CD ANGL. DEV. = 18.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 47 39.77 -85.58 REMARK 500 ASN A 82 46.60 -89.60 REMARK 500 ASP A 141 -146.04 -152.06 REMARK 500 SER A 158 -179.17 -69.88 REMARK 500 ASP A 185 -165.52 -104.41 REMARK 500 PHE A 318 -164.12 59.74 REMARK 500 GLU A 358 46.74 -81.20 REMARK 500 PRO A 432 -164.88 -76.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 122 OE1 REMARK 620 2 HOH A 608 O 88.5 REMARK 620 3 HOH A 630 O 90.7 89.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD2 REMARK 620 2 ASP A 143 OD2 96.0 REMARK 620 3 HOH A 604 O 79.4 72.0 REMARK 620 4 HOH A 611 O 154.9 90.0 125.5 REMARK 620 5 HOH A 631 O 92.9 99.3 167.5 62.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 502 DBREF 5CNQ A 2 465 UNP G0RYN2 G0RYN2_CHATD 2 465 DBREF 5CNQ R 0 15 PDB 5CNQ 5CNQ 0 15 DBREF 5CNQ H 16 30 PDB 5CNQ 5CNQ 16 30 SEQRES 1 A 464 GLY ILE LYS GLY ILE TYR LYS GLU ILE GLY SER GLY GLU SEQRES 2 A 464 ARG ILE SER LEU CYS LYS LEU ALA ILE ASP HIS LEU GLU SEQRES 3 A 464 GLN HIS ASN ARG PRO LEU ARG LEU ALA ILE ASP MSE ALA SEQRES 4 A 464 ILE TRP GLN PHE GLN ILE GLN ALA ALA ARG GLY GLY SER SEQRES 5 A 464 ASN PRO ALA ILE ARG THR LEU PHE TYR ARG PHE VAL ARG SEQRES 6 A 464 LEU LEU SER LEU GLY ILE HIS PRO ILE PHE VAL PHE ASP SEQRES 7 A 464 GLY PRO ASN LYS PRO ILE PHE LYS ARG ASN ARG ARG SER SEQRES 8 A 464 GLY THR GLY ASN GLY VAL SER THR ALA MSE ALA LYS ARG SEQRES 9 A 464 LEU ILE ARG LEU PHE GLY PHE THR ALA HIS ASP ALA PRO SEQRES 10 A 464 GLY GLU ALA GLU ALA GLU CYS ALA TYR LEU GLU GLN GLN SEQRES 11 A 464 GLY ILE VAL ASP ALA VAL LEU SER GLU ASP VAL ASP THR SEQRES 12 A 464 ILE MSE PHE GLY SER ARG VAL THR LEU ARG ASP TRP SER SEQRES 13 A 464 SER GLU GLY SER LYS GLY GLY PRO PRO THR HIS VAL THR SEQRES 14 A 464 LEU HIS ASP ALA LYS LYS ILE ALA GLU GLY PRO SER GLY SEQRES 15 A 464 LEU ASP ARG GLU GLY MSE VAL LEU VAL ALA LEU MSE SER SEQRES 16 A 464 GLY GLY ASP TYR LEU PRO ASP GLY ILE PRO GLY CYS GLY SEQRES 17 A 464 ILE LYS VAL ALA CYS GLN ALA ALA LYS ALA GLY PHE GLY SEQRES 18 A 464 LYS GLU LEU CYS ARG ILE LYS ARG ALA ASP LYS GLU ALA SEQRES 19 A 464 ILE THR GLU TRP LYS GLN ARG LEU LEU HIS GLU LEU ARG SEQRES 20 A 464 THR ASN GLU SER GLY PHE PHE ARG THR LYS HIS LYS ALA SEQRES 21 A 464 LEU GLU ILE PRO GLU ASN PHE PRO ASN MSE GLU VAL LEU SEQRES 22 A 464 ARG TYR TYR THR HIS PRO VAL VAL SER SER PRO ALA THR SEQRES 23 A 464 ILE GLU ARG LEU ARG GLN GLU PHE PRO PRO SER SER THR SEQRES 24 A 464 VAL ASP ILE ALA GLY LEU ARG GLU PHE THR ARG GLU THR SEQRES 25 A 464 PHE ASP TRP THR PHE ARG PRO GLY ALA ILE LYS LEU ILE SEQRES 26 A 464 LYS VAL LEU ALA PRO GLY LEU LEU VAL GLN ARG CYS LEU SEQRES 27 A 464 ASP ARG TYR VAL SER GLY PRO ARG ILE ASP ASP PRO ASP SEQRES 28 A 464 LEU LYS LYS LYS GLU GLU SER THR LEU VAL LYS GLY ILE SEQRES 29 A 464 SER MSE ARG ARG GLU HIS PHE SER THR ASP ALA THR PRO SEQRES 30 A 464 GLU LEU ARG VAL SER PHE ILE PRO ALA GLU LEU VAL GLY SEQRES 31 A 464 LEU ASP PRO GLY GLN GLU PRO GLU VAL GLN VAL GLU ALA SEQRES 32 A 464 PHE GLY ARG SER GLY LEU ALA LEU ASN SER ASP ASP GLU SEQRES 33 A 464 PHE ASP GLU ASP ILE SER SER SER GLN LYS ALA PRO LYS SEQRES 34 A 464 LYS PRO PHE ASP PRO TRP GLN PRO ASP LEU ALA TRP VAL SEQRES 35 A 464 PRO GLU THR ILE LEU LYS LEU GLY VAL PRO VAL THR VAL SEQRES 36 A 464 GLU ASP TRP GLU GLU GLY GLN ARG SER SEQRES 1 R 16 DT DA DC DC DC DA DC DC DA DC DC DG DC SEQRES 2 R 16 DT DC DA SEQRES 1 H 15 DT DG DA DG DC DG DG DT DG DG DT DT DG SEQRES 2 H 15 DG DT MODRES 5CNQ MSE A 39 MET MODIFIED RESIDUE MODRES 5CNQ MSE A 102 MET MODIFIED RESIDUE MODRES 5CNQ MSE A 146 MET MODIFIED RESIDUE MODRES 5CNQ MSE A 189 MET MODIFIED RESIDUE MODRES 5CNQ MSE A 195 MET MODIFIED RESIDUE MODRES 5CNQ MSE A 271 MET MODIFIED RESIDUE MODRES 5CNQ MSE A 367 MET MODIFIED RESIDUE HET MSE A 39 8 HET MSE A 102 8 HET MSE A 146 8 HET MSE A 189 8 HET MSE A 195 8 HET MSE A 271 8 HET MSE A 367 8 HET MN A 501 1 HET MN A 502 1 HETNAM MSE SELENOMETHIONINE HETNAM MN MANGANESE (II) ION FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 4 MN 2(MN 2+) FORMUL 6 HOH *66(H2 O) HELIX 1 AA1 GLY A 5 GLU A 9 5 5 HELIX 2 AA2 LEU A 18 ASN A 30 1 13 HELIX 3 AA3 ALA A 40 GLN A 45 5 6 HELIX 4 AA4 ASN A 54 GLY A 71 1 18 HELIX 5 AA5 SER A 99 PHE A 110 1 12 HELIX 6 AA6 GLU A 120 GLN A 131 1 12 HELIX 7 AA7 VAL A 142 PHE A 147 1 6 HELIX 8 AA8 ALA A 174 ALA A 178 1 5 HELIX 9 AA9 ASP A 185 SER A 196 1 12 HELIX 10 AB1 GLY A 209 ALA A 219 1 11 HELIX 11 AB2 ILE A 236 THR A 249 1 14 HELIX 12 AB3 ASN A 270 HIS A 279 1 10 HELIX 13 AB4 SER A 284 PHE A 295 1 12 HELIX 14 AB5 ASP A 302 ASP A 315 1 14 HELIX 15 AB6 THR A 317 ASP A 340 1 24 HELIX 16 AB7 HIS A 371 ASP A 375 5 5 HELIX 17 AB8 ILE A 385 GLY A 391 1 7 HELIX 18 AB9 ASP A 393 GLU A 397 5 5 HELIX 19 AC1 GLU A 445 VAL A 452 1 8 HELIX 20 AC2 VAL A 452 GLN A 463 1 12 SHEET 1 AA1 7 GLU A 14 SER A 17 0 SHEET 2 AA1 7 HIS A 168 ASP A 173 -1 O LEU A 171 N GLU A 14 SHEET 3 AA1 7 VAL A 151 SER A 157 -1 N THR A 152 O HIS A 172 SHEET 4 AA1 7 ALA A 136 LEU A 138 1 N VAL A 137 O LEU A 153 SHEET 5 AA1 7 ARG A 34 ASP A 38 1 N ALA A 36 O LEU A 138 SHEET 6 AA1 7 HIS A 73 PHE A 78 1 O ILE A 75 N ILE A 37 SHEET 7 AA1 7 THR A 113 ASP A 116 1 O HIS A 115 N PHE A 76 SHEET 1 AA2 3 GLY A 364 ARG A 369 0 SHEET 2 AA2 3 GLU A 379 PHE A 384 -1 O GLU A 379 N ARG A 369 SHEET 3 AA2 3 ASP A 439 PRO A 444 -1 O ASP A 439 N PHE A 384 LINK C ASP A 38 N MSE A 39 1555 1555 1.33 LINK C MSE A 39 N ALA A 40 1555 1555 1.33 LINK C ALA A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N ALA A 103 1555 1555 1.33 LINK C ILE A 145 N MSE A 146 1555 1555 1.33 LINK C MSE A 146 N PHE A 147 1555 1555 1.33 LINK C GLY A 188 N MSE A 189 1555 1555 1.33 LINK C MSE A 189 N VAL A 190 1555 1555 1.33 LINK C LEU A 194 N MSE A 195 1555 1555 1.33 LINK C MSE A 195 N SER A 196 1555 1555 1.33 LINK C ASN A 270 N MSE A 271 1555 1555 1.32 LINK C MSE A 271 N GLU A 272 1555 1555 1.32 LINK C SER A 366 N MSE A 367 1555 1555 1.33 LINK C MSE A 367 N ARG A 368 1555 1555 1.33 LINK OE1 GLU A 122 MN MN A 501 1555 1555 2.23 LINK OD2 ASP A 141 MN MN A 502 1555 1555 2.31 LINK OD2 ASP A 143 MN MN A 502 1555 1555 2.19 LINK MN MN A 501 O HOH A 608 1555 1555 2.58 LINK MN MN A 501 O HOH A 630 1555 1555 2.34 LINK MN MN A 502 O HOH A 604 1555 1555 1.78 LINK MN MN A 502 O HOH A 611 1555 1555 1.96 LINK MN MN A 502 O HOH A 631 1555 1555 2.79 CISPEP 1 GLY A 2 ILE A 3 0 2.95 CISPEP 2 CYS A 208 GLY A 209 0 0.67 CISPEP 3 LYS A 223 GLU A 224 0 14.39 CISPEP 4 PHE A 268 PRO A 269 0 -8.42 CISPEP 5 PHE A 295 PRO A 296 0 0.43 SITE 1 AC1 4 GLU A 122 HOH A 608 HOH A 630 HOH A 653 SITE 1 AC2 7 ASP A 141 ASP A 143 HOH A 604 HOH A 611 SITE 2 AC2 7 HOH A 631 DG H 17 HOH H 101 CRYST1 98.582 98.582 119.619 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010144 0.005857 0.000000 0.00000 SCALE2 0.000000 0.011713 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008360 0.00000