data_5COT # _entry.id 5COT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5COT WWPDB D_1000211976 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5COU PDB . unspecified 5COV PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5COT _pdbx_database_status.recvd_initial_deposition_date 2015-07-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Unciuleac, M.C.' 1 'Goldgur, Y.' 2 'Shuman, S.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 112 _citation.language ? _citation.page_first 13868 _citation.page_last 13873 _citation.title 'Structure and two-metal mechanism of a eukaryal nick-sealing RNA ligase.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1516536112 _citation.pdbx_database_id_PubMed 26512110 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Unciuleac, M.C.' 1 ? primary 'Goldgur, Y.' 2 ? primary 'Shuman, S.' 3 ? # _cell.entry_id 5COT _cell.length_a 55.285 _cell.length_b 55.285 _cell.length_c 102.545 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5COT _symmetry.space_group_name_H-M 'P 32' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Naegleria gruberi RNA ligase' 38661.832 1 ? ? ? ? 2 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 3 non-polymer nat 'UNKNOWN ATOM OR ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 524 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMGVRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEIDSFIKEDNDRYPMLSKQVIDYEGQRGT RLRTARLRGQLSQGLFLPMDRFPELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNLIPQIEE NKGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQWHAARRNKMIEGLQFLNRNLALQGEIIGESIQGNLEK LKGQDFYLFDIYDIDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGPSLNKNVKREGLVFKRL DGKFSFKAISNAYLEKHKDR ; _entity_poly.pdbx_seq_one_letter_code_can ;SMGVRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEIDSFIKEDNDRYPMLSKQVIDYEGQRGT RLRTARLRGQLSQGLFLPMDRFPELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNLIPQIEE NKGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQWHAARRNKMIEGLQFLNRNLALQGEIIGESIQGNLEK LKGQDFYLFDIYDIDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGPSLNKNVKREGLVFKRL DGKFSFKAISNAYLEKHKDR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLY n 1 4 VAL n 1 5 ARG n 1 6 LYS n 1 7 LEU n 1 8 ALA n 1 9 THR n 1 10 ILE n 1 11 ARG n 1 12 THR n 1 13 ALA n 1 14 GLY n 1 15 GLU n 1 16 ILE n 1 17 THR n 1 18 PRO n 1 19 ILE n 1 20 ALA n 1 21 GLY n 1 22 ALA n 1 23 GLU n 1 24 ALA n 1 25 ILE n 1 26 GLU n 1 27 CYS n 1 28 CYS n 1 29 HIS n 1 30 VAL n 1 31 ASP n 1 32 GLY n 1 33 TRP n 1 34 THR n 1 35 CYS n 1 36 VAL n 1 37 ILE n 1 38 LYS n 1 39 LYS n 1 40 GLY n 1 41 GLU n 1 42 PHE n 1 43 LYS n 1 44 GLN n 1 45 GLY n 1 46 ASP n 1 47 ARG n 1 48 GLY n 1 49 VAL n 1 50 TYR n 1 51 PHE n 1 52 GLU n 1 53 ILE n 1 54 ASP n 1 55 SER n 1 56 PHE n 1 57 ILE n 1 58 LYS n 1 59 GLU n 1 60 ASP n 1 61 ASN n 1 62 ASP n 1 63 ARG n 1 64 TYR n 1 65 PRO n 1 66 MET n 1 67 LEU n 1 68 SER n 1 69 LYS n 1 70 GLN n 1 71 VAL n 1 72 ILE n 1 73 ASP n 1 74 TYR n 1 75 GLU n 1 76 GLY n 1 77 GLN n 1 78 ARG n 1 79 GLY n 1 80 THR n 1 81 ARG n 1 82 LEU n 1 83 ARG n 1 84 THR n 1 85 ALA n 1 86 ARG n 1 87 LEU n 1 88 ARG n 1 89 GLY n 1 90 GLN n 1 91 LEU n 1 92 SER n 1 93 GLN n 1 94 GLY n 1 95 LEU n 1 96 PHE n 1 97 LEU n 1 98 PRO n 1 99 MET n 1 100 ASP n 1 101 ARG n 1 102 PHE n 1 103 PRO n 1 104 GLU n 1 105 LEU n 1 106 ALA n 1 107 SER n 1 108 ASN n 1 109 GLN n 1 110 VAL n 1 111 GLY n 1 112 ASP n 1 113 ASP n 1 114 VAL n 1 115 THR n 1 116 GLU n 1 117 ILE n 1 118 LEU n 1 119 GLY n 1 120 ILE n 1 121 THR n 1 122 LYS n 1 123 TRP n 1 124 GLU n 1 125 PRO n 1 126 PRO n 1 127 ILE n 1 128 SER n 1 129 THR n 1 130 ASN n 1 131 LEU n 1 132 SER n 1 133 GLY n 1 134 GLU n 1 135 ILE n 1 136 LEU n 1 137 GLY n 1 138 GLU n 1 139 PHE n 1 140 PRO n 1 141 THR n 1 142 PHE n 1 143 ILE n 1 144 SER n 1 145 LYS n 1 146 THR n 1 147 ASP n 1 148 GLN n 1 149 GLU n 1 150 ARG n 1 151 VAL n 1 152 GLN n 1 153 ASN n 1 154 LEU n 1 155 ILE n 1 156 PRO n 1 157 GLN n 1 158 ILE n 1 159 GLU n 1 160 GLU n 1 161 ASN n 1 162 LYS n 1 163 GLY n 1 164 GLN n 1 165 LYS n 1 166 PHE n 1 167 GLU n 1 168 VAL n 1 169 THR n 1 170 VAL n 1 171 LYS n 1 172 LEU n 1 173 ASP n 1 174 GLY n 1 175 SER n 1 176 SER n 1 177 MET n 1 178 THR n 1 179 VAL n 1 180 TYR n 1 181 ARG n 1 182 LYS n 1 183 ASP n 1 184 ASP n 1 185 HIS n 1 186 ILE n 1 187 GLY n 1 188 VAL n 1 189 CYS n 1 190 GLY n 1 191 ARG n 1 192 ASN n 1 193 TRP n 1 194 GLU n 1 195 LEU n 1 196 ARG n 1 197 GLU n 1 198 THR n 1 199 ALA n 1 200 THR n 1 201 ASN n 1 202 ALA n 1 203 GLN n 1 204 TRP n 1 205 HIS n 1 206 ALA n 1 207 ALA n 1 208 ARG n 1 209 ARG n 1 210 ASN n 1 211 LYS n 1 212 MET n 1 213 ILE n 1 214 GLU n 1 215 GLY n 1 216 LEU n 1 217 GLN n 1 218 PHE n 1 219 LEU n 1 220 ASN n 1 221 ARG n 1 222 ASN n 1 223 LEU n 1 224 ALA n 1 225 LEU n 1 226 GLN n 1 227 GLY n 1 228 GLU n 1 229 ILE n 1 230 ILE n 1 231 GLY n 1 232 GLU n 1 233 SER n 1 234 ILE n 1 235 GLN n 1 236 GLY n 1 237 ASN n 1 238 LEU n 1 239 GLU n 1 240 LYS n 1 241 LEU n 1 242 LYS n 1 243 GLY n 1 244 GLN n 1 245 ASP n 1 246 PHE n 1 247 TYR n 1 248 LEU n 1 249 PHE n 1 250 ASP n 1 251 ILE n 1 252 TYR n 1 253 ASP n 1 254 ILE n 1 255 ASP n 1 256 LYS n 1 257 ALA n 1 258 GLN n 1 259 TYR n 1 260 LEU n 1 261 THR n 1 262 PRO n 1 263 ILE n 1 264 GLU n 1 265 ARG n 1 266 GLN n 1 267 SER n 1 268 LEU n 1 269 VAL n 1 270 LYS n 1 271 GLN n 1 272 LEU n 1 273 ASN n 1 274 ASP n 1 275 ASN n 1 276 GLY n 1 277 PHE n 1 278 THR n 1 279 VAL n 1 280 LYS n 1 281 HIS n 1 282 VAL n 1 283 PRO n 1 284 ILE n 1 285 LEU n 1 286 ASP n 1 287 ASP n 1 288 LEU n 1 289 GLU n 1 290 LEU n 1 291 ASN n 1 292 HIS n 1 293 THR n 1 294 ALA n 1 295 GLU n 1 296 GLN n 1 297 ILE n 1 298 LEU n 1 299 ALA n 1 300 MET n 1 301 ALA n 1 302 ASP n 1 303 GLY n 1 304 PRO n 1 305 SER n 1 306 LEU n 1 307 ASN n 1 308 LYS n 1 309 ASN n 1 310 VAL n 1 311 LYS n 1 312 ARG n 1 313 GLU n 1 314 GLY n 1 315 LEU n 1 316 VAL n 1 317 PHE n 1 318 LYS n 1 319 ARG n 1 320 LEU n 1 321 ASP n 1 322 GLY n 1 323 LYS n 1 324 PHE n 1 325 SER n 1 326 PHE n 1 327 LYS n 1 328 ALA n 1 329 ILE n 1 330 SER n 1 331 ASN n 1 332 ALA n 1 333 TYR n 1 334 LEU n 1 335 GLU n 1 336 LYS n 1 337 HIS n 1 338 LYS n 1 339 ASP n 1 340 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 340 _entity_src_gen.gene_src_common_name Amoeba _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NAEGRDRAFT_82186 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Naegleria gruberi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5762 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D2W2Z5_NAEGR _struct_ref.pdbx_db_accession D2W2Z5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGVRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEIDSFIKEDNDRYPMLSKQVIDYEGQRGTR LRTARLRGQLSQGLFLPMDRFPELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNLIPQIEEN KGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQWHAARRNKMIEGLQFLNRNLALQGEIIGESIQGNLEKL KGQDFYLFDIYDIDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGPSLNKNVKREGLVFKRLD GKFSFKAISNAYLEKHKDR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5COT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 340 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D2W2Z5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 339 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 339 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5COT _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code D2W2Z5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5COT _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, 30% PEG 6000' _exptl_crystal_grow.pdbx_pH_range 6.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-02-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5COT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.69 _reflns.d_resolution_low 20 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 38947 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.9 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.69 _reflns_shell.d_res_low 1.75 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.51 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.414 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5COT _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 36965 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.61 _refine.ls_d_res_high 1.69 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.16046 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15834 _refine.ls_R_factor_R_free 0.19953 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1950 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 27.614 _refine.aniso_B[1][1] -0.00 _refine.aniso_B[2][2] -0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.101 _refine.pdbx_overall_ESU_R_Free 0.102 _refine.overall_SU_ML 0.074 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.265 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2717 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 524 _refine_hist.number_atoms_total 3264 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 19.61 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.019 ? 2788 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2685 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.183 1.970 ? 3757 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.197 3.000 ? 6179 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.595 5.000 ? 339 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.624 24.643 ? 140 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.658 15.000 ? 516 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.756 15.000 ? 21 'X-RAY DIFFRACTION' ? r_chiral_restr 0.176 0.200 ? 409 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 3163 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 645 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.357 2.409 ? 1359 'X-RAY DIFFRACTION' ? r_mcbond_other 2.357 2.409 ? 1358 'X-RAY DIFFRACTION' ? r_mcangle_it 3.064 3.607 ? 1697 'X-RAY DIFFRACTION' ? r_mcangle_other 3.063 3.607 ? 1698 'X-RAY DIFFRACTION' ? r_scbond_it 3.736 2.752 ? 1429 'X-RAY DIFFRACTION' ? r_scbond_other 3.735 2.751 ? 1430 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 5.419 3.967 ? 2061 'X-RAY DIFFRACTION' ? r_long_range_B_refined 7.278 21.672 ? 3655 'X-RAY DIFFRACTION' ? r_long_range_B_other 6.966 20.195 ? 3338 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.69 _refine_ls_shell.d_res_low 1.738 _refine_ls_shell.number_reflns_R_work 2683 _refine_ls_shell.R_factor_R_work 0.256 _refine_ls_shell.percent_reflns_obs 98.34 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 162 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5COT _struct.title 'Structure and mechanism of a eukaryal nick-sealing RNA ligase' _struct.pdbx_descriptor 'Naegleria gruberi RNA ligase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5COT _struct_keywords.text 'RNA repair, adenylyltransferase, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 64 ? VAL A 71 ? TYR A 63 VAL A 70 5 ? 8 HELX_P HELX_P2 AA2 ASP A 100 ? ALA A 106 ? ASP A 99 ALA A 105 5 ? 7 HELX_P HELX_P3 AA3 VAL A 114 ? GLY A 119 ? VAL A 113 GLY A 118 1 ? 6 HELX_P HELX_P4 AA4 SER A 128 ? SER A 132 ? SER A 127 SER A 131 5 ? 5 HELX_P HELX_P5 AA5 ARG A 150 ? ASN A 153 ? ARG A 149 ASN A 152 5 ? 4 HELX_P HELX_P6 AA6 LEU A 154 ? ASN A 161 ? LEU A 153 ASN A 160 1 ? 8 HELX_P HELX_P7 AA7 ASN A 201 ? ASN A 210 ? ASN A 200 ASN A 209 1 ? 10 HELX_P HELX_P8 AA8 LYS A 211 ? ASN A 220 ? LYS A 210 ASN A 219 1 ? 10 HELX_P HELX_P9 AA9 THR A 261 ? ASN A 275 ? THR A 260 ASN A 274 1 ? 15 HELX_P HELX_P10 AB1 THR A 293 ? ALA A 301 ? THR A 292 ALA A 300 1 ? 9 HELX_P HELX_P11 AB2 SER A 330 ? HIS A 337 ? SER A 329 HIS A 336 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 171 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id AMP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id P _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 170 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id AMP _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.746 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 2 ? AA4 ? 7 ? AA5 ? 7 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA4 6 7 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 33 ? LYS A 38 ? TRP A 32 LYS A 37 AA1 2 ILE A 25 ? VAL A 30 ? ILE A 24 VAL A 29 AA1 3 ALA A 8 ? PRO A 18 ? ALA A 7 PRO A 17 AA1 4 ARG A 47 ? PHE A 51 ? ARG A 46 PHE A 50 AA1 5 LEU A 95 ? PRO A 98 ? LEU A 94 PRO A 97 AA2 1 ILE A 72 ? TYR A 74 ? ILE A 71 TYR A 73 AA2 2 GLN A 77 ? ARG A 81 ? GLN A 76 ARG A 80 AA2 3 SER A 55 ? LYS A 58 ? SER A 54 LYS A 57 AA2 4 THR A 121 ? LYS A 122 ? THR A 120 LYS A 121 AA3 1 ALA A 85 ? LEU A 87 ? ALA A 84 LEU A 86 AA3 2 GLN A 90 ? SER A 92 ? GLN A 89 SER A 91 AA4 1 ILE A 135 ? GLU A 138 ? ILE A 134 GLU A 137 AA4 2 TRP A 193 ? LEU A 195 ? TRP A 192 LEU A 194 AA4 3 HIS A 185 ? CYS A 189 ? HIS A 184 CYS A 188 AA4 4 SER A 175 ? LYS A 182 ? SER A 174 LYS A 181 AA4 5 LEU A 223 ? GLY A 231 ? LEU A 222 GLY A 230 AA4 6 GLN A 244 ? ASP A 253 ? GLN A 243 ASP A 252 AA4 7 GLN A 258 ? TYR A 259 ? GLN A 257 TYR A 258 AA5 1 ILE A 135 ? GLU A 138 ? ILE A 134 GLU A 137 AA5 2 TRP A 193 ? LEU A 195 ? TRP A 192 LEU A 194 AA5 3 HIS A 185 ? CYS A 189 ? HIS A 184 CYS A 188 AA5 4 SER A 175 ? LYS A 182 ? SER A 174 LYS A 181 AA5 5 LEU A 223 ? GLY A 231 ? LEU A 222 GLY A 230 AA5 6 GLN A 244 ? ASP A 253 ? GLN A 243 ASP A 252 AA5 7 LYS A 280 ? HIS A 281 ? LYS A 279 HIS A 280 AA6 1 LEU A 288 ? GLU A 289 ? LEU A 287 GLU A 288 AA6 2 LYS A 165 ? LYS A 171 ? LYS A 164 LYS A 170 AA6 3 GLY A 314 ? ARG A 319 ? GLY A 313 ARG A 318 AA6 4 SER A 325 ? ILE A 329 ? SER A 324 ILE A 328 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 37 ? O ILE A 36 N GLU A 26 ? N GLU A 25 AA1 2 3 O HIS A 29 ? O HIS A 28 N GLY A 14 ? N GLY A 13 AA1 3 4 N THR A 9 ? N THR A 8 O TYR A 50 ? O TYR A 49 AA1 4 5 N PHE A 51 ? N PHE A 50 O LEU A 95 ? O LEU A 94 AA2 1 2 N ILE A 72 ? N ILE A 71 O GLY A 79 ? O GLY A 78 AA2 2 3 O THR A 80 ? O THR A 79 N ILE A 57 ? N ILE A 56 AA2 3 4 N PHE A 56 ? N PHE A 55 O THR A 121 ? O THR A 120 AA3 1 2 N LEU A 87 ? N LEU A 86 O GLN A 90 ? O GLN A 89 AA4 1 2 N LEU A 136 ? N LEU A 135 O GLU A 194 ? O GLU A 193 AA4 2 3 O LEU A 195 ? O LEU A 194 N VAL A 188 ? N VAL A 187 AA4 3 4 O CYS A 189 ? O CYS A 188 N THR A 178 ? N THR A 177 AA4 4 5 N VAL A 179 ? N VAL A 178 O LEU A 225 ? O LEU A 224 AA4 5 6 N GLN A 226 ? N GLN A 225 O ASP A 250 ? O ASP A 249 AA4 6 7 N ASP A 253 ? N ASP A 252 O GLN A 258 ? O GLN A 257 AA5 1 2 N LEU A 136 ? N LEU A 135 O GLU A 194 ? O GLU A 193 AA5 2 3 O LEU A 195 ? O LEU A 194 N VAL A 188 ? N VAL A 187 AA5 3 4 O CYS A 189 ? O CYS A 188 N THR A 178 ? N THR A 177 AA5 4 5 N VAL A 179 ? N VAL A 178 O LEU A 225 ? O LEU A 224 AA5 5 6 N GLN A 226 ? N GLN A 225 O ASP A 250 ? O ASP A 249 AA5 6 7 N LEU A 248 ? N LEU A 247 O LYS A 280 ? O LYS A 279 AA6 1 2 O LEU A 288 ? O LEU A 287 N PHE A 166 ? N PHE A 165 AA6 2 3 N GLU A 167 ? N GLU A 166 O LYS A 318 ? O LYS A 317 AA6 3 4 N PHE A 317 ? N PHE A 316 O PHE A 326 ? O PHE A 325 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id AMP _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 19 _struct_site.details 'binding site for residue AMP A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 THR A 146 ? THR A 145 . ? 1_555 ? 2 AC1 19 THR A 169 ? THR A 168 . ? 1_555 ? 3 AC1 19 VAL A 170 ? VAL A 169 . ? 1_555 ? 4 AC1 19 LYS A 171 ? LYS A 170 . ? 1_555 ? 5 AC1 19 LEU A 172 ? LEU A 171 . ? 1_555 ? 6 AC1 19 SER A 176 ? SER A 175 . ? 1_555 ? 7 AC1 19 GLU A 228 ? GLU A 227 . ? 1_555 ? 8 AC1 19 PHE A 249 ? PHE A 248 . ? 1_555 ? 9 AC1 19 VAL A 282 ? VAL A 281 . ? 1_555 ? 10 AC1 19 VAL A 316 ? VAL A 315 . ? 1_555 ? 11 AC1 19 LYS A 318 ? LYS A 317 . ? 1_555 ? 12 AC1 19 LYS A 327 ? LYS A 326 . ? 1_555 ? 13 AC1 19 ILE A 329 ? ILE A 328 . ? 1_555 ? 14 AC1 19 HOH D . ? HOH A 511 . ? 1_555 ? 15 AC1 19 HOH D . ? HOH A 561 . ? 1_555 ? 16 AC1 19 HOH D . ? HOH A 563 . ? 1_555 ? 17 AC1 19 HOH D . ? HOH A 591 . ? 1_555 ? 18 AC1 19 HOH D . ? HOH A 828 . ? 1_555 ? 19 AC1 19 HOH D . ? HOH A 842 . ? 1_555 ? # _atom_sites.entry_id 5COT _atom_sites.fract_transf_matrix[1][1] 0.018088 _atom_sites.fract_transf_matrix[1][2] 0.010443 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020886 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009752 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 GLY 3 2 2 GLY GLY A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 ARG 5 4 4 ARG ARG A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 THR 9 8 8 THR THR A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 THR 12 11 11 THR THR A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 CYS 27 26 26 CYS CYS A . n A 1 28 CYS 28 27 27 CYS CYS A . n A 1 29 HIS 29 28 28 HIS HIS A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 TRP 33 32 32 TRP TRP A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 CYS 35 34 34 CYS CYS A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 LYS 39 38 38 LYS LYS A . n A 1 40 GLY 40 39 39 GLY GLY A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 PHE 42 41 41 PHE PHE A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLN 44 43 43 GLN GLN A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 TYR 50 49 49 TYR TYR A . n A 1 51 PHE 51 50 50 PHE PHE A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 PHE 56 55 55 PHE PHE A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 GLU 59 58 58 GLU GLU A . n A 1 60 ASP 60 59 59 ASP ASP A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 ARG 63 62 62 ARG ARG A . n A 1 64 TYR 64 63 63 TYR TYR A . n A 1 65 PRO 65 64 64 PRO PRO A . n A 1 66 MET 66 65 65 MET MET A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 GLN 70 69 69 GLN GLN A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 ASP 73 72 72 ASP ASP A . n A 1 74 TYR 74 73 73 TYR TYR A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 ARG 78 77 77 ARG ARG A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 THR 80 79 79 THR THR A . n A 1 81 ARG 81 80 80 ARG ARG A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ARG 83 82 82 ARG ARG A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 GLY 89 88 88 GLY GLY A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 GLN 93 92 92 GLN GLN A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 PRO 98 97 97 PRO PRO A . n A 1 99 MET 99 98 98 MET MET A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 ASN 108 107 107 ASN ASN A . n A 1 109 GLN 109 108 108 GLN GLN A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 ASP 112 111 111 ASP ASP A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 ILE 117 116 116 ILE ILE A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 LYS 122 121 121 LYS LYS A . n A 1 123 TRP 123 122 122 TRP TRP A . n A 1 124 GLU 124 123 123 GLU GLU A . n A 1 125 PRO 125 124 124 PRO PRO A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 THR 129 128 128 THR THR A . n A 1 130 ASN 130 129 129 ASN ASN A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 SER 132 131 131 SER SER A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 LEU 136 135 135 LEU LEU A . n A 1 137 GLY 137 136 136 GLY GLY A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 PRO 140 139 139 PRO PRO A . n A 1 141 THR 141 140 140 THR THR A . n A 1 142 PHE 142 141 141 PHE PHE A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 LYS 145 144 144 LYS LYS A . n A 1 146 THR 146 145 145 THR THR A . n A 1 147 ASP 147 146 146 ASP ASP A . n A 1 148 GLN 148 147 147 GLN GLN A . n A 1 149 GLU 149 148 148 GLU GLU A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 GLN 152 151 151 GLN GLN A . n A 1 153 ASN 153 152 152 ASN ASN A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 ILE 155 154 154 ILE ILE A . n A 1 156 PRO 156 155 155 PRO PRO A . n A 1 157 GLN 157 156 156 GLN GLN A . n A 1 158 ILE 158 157 157 ILE ILE A . n A 1 159 GLU 159 158 158 GLU GLU A . n A 1 160 GLU 160 159 159 GLU GLU A . n A 1 161 ASN 161 160 160 ASN ASN A . n A 1 162 LYS 162 161 161 LYS LYS A . n A 1 163 GLY 163 162 162 GLY GLY A . n A 1 164 GLN 164 163 163 GLN GLN A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 PHE 166 165 165 PHE PHE A . n A 1 167 GLU 167 166 166 GLU GLU A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 THR 169 168 168 THR THR A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 LYS 171 170 170 LYS LYS A . n A 1 172 LEU 172 171 171 LEU LEU A . n A 1 173 ASP 173 172 172 ASP ASP A . n A 1 174 GLY 174 173 173 GLY GLY A . n A 1 175 SER 175 174 174 SER SER A . n A 1 176 SER 176 175 175 SER SER A . n A 1 177 MET 177 176 176 MET MET A . n A 1 178 THR 178 177 177 THR THR A . n A 1 179 VAL 179 178 178 VAL VAL A . n A 1 180 TYR 180 179 179 TYR TYR A . n A 1 181 ARG 181 180 180 ARG ARG A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 ASP 183 182 182 ASP ASP A . n A 1 184 ASP 184 183 183 ASP ASP A . n A 1 185 HIS 185 184 184 HIS HIS A . n A 1 186 ILE 186 185 185 ILE ILE A . n A 1 187 GLY 187 186 186 GLY GLY A . n A 1 188 VAL 188 187 187 VAL VAL A . n A 1 189 CYS 189 188 188 CYS CYS A . n A 1 190 GLY 190 189 189 GLY GLY A . n A 1 191 ARG 191 190 190 ARG ARG A . n A 1 192 ASN 192 191 191 ASN ASN A . n A 1 193 TRP 193 192 192 TRP TRP A . n A 1 194 GLU 194 193 193 GLU GLU A . n A 1 195 LEU 195 194 194 LEU LEU A . n A 1 196 ARG 196 195 195 ARG ARG A . n A 1 197 GLU 197 196 196 GLU GLU A . n A 1 198 THR 198 197 197 THR THR A . n A 1 199 ALA 199 198 198 ALA ALA A . n A 1 200 THR 200 199 199 THR THR A . n A 1 201 ASN 201 200 200 ASN ASN A . n A 1 202 ALA 202 201 201 ALA ALA A . n A 1 203 GLN 203 202 202 GLN GLN A . n A 1 204 TRP 204 203 203 TRP TRP A . n A 1 205 HIS 205 204 204 HIS HIS A . n A 1 206 ALA 206 205 205 ALA ALA A . n A 1 207 ALA 207 206 206 ALA ALA A . n A 1 208 ARG 208 207 207 ARG ARG A . n A 1 209 ARG 209 208 208 ARG ARG A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 LYS 211 210 210 LYS LYS A . n A 1 212 MET 212 211 211 MET MET A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 GLU 214 213 213 GLU GLU A . n A 1 215 GLY 215 214 214 GLY GLY A . n A 1 216 LEU 216 215 215 LEU LEU A . n A 1 217 GLN 217 216 216 GLN GLN A . n A 1 218 PHE 218 217 217 PHE PHE A . n A 1 219 LEU 219 218 218 LEU LEU A . n A 1 220 ASN 220 219 219 ASN ASN A . n A 1 221 ARG 221 220 220 ARG ARG A . n A 1 222 ASN 222 221 221 ASN ASN A . n A 1 223 LEU 223 222 222 LEU LEU A . n A 1 224 ALA 224 223 223 ALA ALA A . n A 1 225 LEU 225 224 224 LEU LEU A . n A 1 226 GLN 226 225 225 GLN GLN A . n A 1 227 GLY 227 226 226 GLY GLY A . n A 1 228 GLU 228 227 227 GLU GLU A . n A 1 229 ILE 229 228 228 ILE ILE A . n A 1 230 ILE 230 229 229 ILE ILE A . n A 1 231 GLY 231 230 230 GLY GLY A . n A 1 232 GLU 232 231 231 GLU GLU A . n A 1 233 SER 233 232 232 SER SER A . n A 1 234 ILE 234 233 233 ILE ILE A . n A 1 235 GLN 235 234 234 GLN GLN A . n A 1 236 GLY 236 235 235 GLY GLY A . n A 1 237 ASN 237 236 236 ASN ASN A . n A 1 238 LEU 238 237 237 LEU LEU A . n A 1 239 GLU 239 238 238 GLU GLU A . n A 1 240 LYS 240 239 239 LYS LYS A . n A 1 241 LEU 241 240 240 LEU LEU A . n A 1 242 LYS 242 241 241 LYS LYS A . n A 1 243 GLY 243 242 242 GLY GLY A . n A 1 244 GLN 244 243 243 GLN GLN A . n A 1 245 ASP 245 244 244 ASP ASP A . n A 1 246 PHE 246 245 245 PHE PHE A . n A 1 247 TYR 247 246 246 TYR TYR A . n A 1 248 LEU 248 247 247 LEU LEU A . n A 1 249 PHE 249 248 248 PHE PHE A . n A 1 250 ASP 250 249 249 ASP ASP A . n A 1 251 ILE 251 250 250 ILE ILE A . n A 1 252 TYR 252 251 251 TYR TYR A . n A 1 253 ASP 253 252 252 ASP ASP A . n A 1 254 ILE 254 253 253 ILE ILE A . n A 1 255 ASP 255 254 254 ASP ASP A . n A 1 256 LYS 256 255 255 LYS LYS A . n A 1 257 ALA 257 256 256 ALA ALA A . n A 1 258 GLN 258 257 257 GLN GLN A . n A 1 259 TYR 259 258 258 TYR TYR A . n A 1 260 LEU 260 259 259 LEU LEU A . n A 1 261 THR 261 260 260 THR THR A . n A 1 262 PRO 262 261 261 PRO PRO A . n A 1 263 ILE 263 262 262 ILE ILE A . n A 1 264 GLU 264 263 263 GLU GLU A . n A 1 265 ARG 265 264 264 ARG ARG A . n A 1 266 GLN 266 265 265 GLN GLN A . n A 1 267 SER 267 266 266 SER SER A . n A 1 268 LEU 268 267 267 LEU LEU A . n A 1 269 VAL 269 268 268 VAL VAL A . n A 1 270 LYS 270 269 269 LYS LYS A . n A 1 271 GLN 271 270 270 GLN GLN A . n A 1 272 LEU 272 271 271 LEU LEU A . n A 1 273 ASN 273 272 272 ASN ASN A . n A 1 274 ASP 274 273 273 ASP ASP A . n A 1 275 ASN 275 274 274 ASN ASN A . n A 1 276 GLY 276 275 275 GLY GLY A . n A 1 277 PHE 277 276 276 PHE PHE A . n A 1 278 THR 278 277 277 THR THR A . n A 1 279 VAL 279 278 278 VAL VAL A . n A 1 280 LYS 280 279 279 LYS LYS A . n A 1 281 HIS 281 280 280 HIS HIS A . n A 1 282 VAL 282 281 281 VAL VAL A . n A 1 283 PRO 283 282 282 PRO PRO A . n A 1 284 ILE 284 283 283 ILE ILE A . n A 1 285 LEU 285 284 284 LEU LEU A . n A 1 286 ASP 286 285 285 ASP ASP A . n A 1 287 ASP 287 286 286 ASP ASP A . n A 1 288 LEU 288 287 287 LEU LEU A . n A 1 289 GLU 289 288 288 GLU GLU A . n A 1 290 LEU 290 289 289 LEU LEU A . n A 1 291 ASN 291 290 290 ASN ASN A . n A 1 292 HIS 292 291 291 HIS HIS A . n A 1 293 THR 293 292 292 THR THR A . n A 1 294 ALA 294 293 293 ALA ALA A . n A 1 295 GLU 295 294 294 GLU GLU A . n A 1 296 GLN 296 295 295 GLN GLN A . n A 1 297 ILE 297 296 296 ILE ILE A . n A 1 298 LEU 298 297 297 LEU LEU A . n A 1 299 ALA 299 298 298 ALA ALA A . n A 1 300 MET 300 299 299 MET MET A . n A 1 301 ALA 301 300 300 ALA ALA A . n A 1 302 ASP 302 301 301 ASP ASP A . n A 1 303 GLY 303 302 302 GLY GLY A . n A 1 304 PRO 304 303 303 PRO PRO A . n A 1 305 SER 305 304 304 SER SER A . n A 1 306 LEU 306 305 305 LEU LEU A . n A 1 307 ASN 307 306 306 ASN ASN A . n A 1 308 LYS 308 307 307 LYS LYS A . n A 1 309 ASN 309 308 308 ASN ASN A . n A 1 310 VAL 310 309 309 VAL VAL A . n A 1 311 LYS 311 310 310 LYS LYS A . n A 1 312 ARG 312 311 311 ARG ARG A . n A 1 313 GLU 313 312 312 GLU GLU A . n A 1 314 GLY 314 313 313 GLY GLY A . n A 1 315 LEU 315 314 314 LEU LEU A . n A 1 316 VAL 316 315 315 VAL VAL A . n A 1 317 PHE 317 316 316 PHE PHE A . n A 1 318 LYS 318 317 317 LYS LYS A . n A 1 319 ARG 319 318 318 ARG ARG A . n A 1 320 LEU 320 319 319 LEU LEU A . n A 1 321 ASP 321 320 320 ASP ASP A . n A 1 322 GLY 322 321 321 GLY GLY A . n A 1 323 LYS 323 322 322 LYS LYS A . n A 1 324 PHE 324 323 323 PHE PHE A . n A 1 325 SER 325 324 324 SER SER A . n A 1 326 PHE 326 325 325 PHE PHE A . n A 1 327 LYS 327 326 326 LYS LYS A . n A 1 328 ALA 328 327 327 ALA ALA A . n A 1 329 ILE 329 328 328 ILE ILE A . n A 1 330 SER 330 329 329 SER SER A . n A 1 331 ASN 331 330 330 ASN ASN A . n A 1 332 ALA 332 331 331 ALA ALA A . n A 1 333 TYR 333 332 332 TYR TYR A . n A 1 334 LEU 334 333 333 LEU LEU A . n A 1 335 GLU 335 334 334 GLU GLU A . n A 1 336 LYS 336 335 335 LYS LYS A . n A 1 337 HIS 337 336 336 HIS HIS A . n A 1 338 LYS 338 337 337 LYS LYS A . n A 1 339 ASP 339 338 338 ASP ASP A . n A 1 340 ARG 340 339 339 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMP 1 401 1170 AMP AMP A . C 3 UNX 1 402 1 UNX MG A . D 4 HOH 1 501 96 HOH HOH A . D 4 HOH 2 502 241 HOH HOH A . D 4 HOH 3 503 378 HOH HOH A . D 4 HOH 4 504 131 HOH HOH A . D 4 HOH 5 505 258 HOH HOH A . D 4 HOH 6 506 336 HOH HOH A . D 4 HOH 7 507 176 HOH HOH A . D 4 HOH 8 508 155 HOH HOH A . D 4 HOH 9 509 206 HOH HOH A . D 4 HOH 10 510 150 HOH HOH A . D 4 HOH 11 511 40 HOH HOH A . D 4 HOH 12 512 430 HOH HOH A . D 4 HOH 13 513 275 HOH HOH A . D 4 HOH 14 514 34 HOH HOH A . D 4 HOH 15 515 351 HOH HOH A . D 4 HOH 16 516 242 HOH HOH A . D 4 HOH 17 517 235 HOH HOH A . D 4 HOH 18 518 253 HOH HOH A . D 4 HOH 19 519 281 HOH HOH A . D 4 HOH 20 520 121 HOH HOH A . D 4 HOH 21 521 178 HOH HOH A . D 4 HOH 22 522 320 HOH HOH A . D 4 HOH 23 523 234 HOH HOH A . D 4 HOH 24 524 376 HOH HOH A . D 4 HOH 25 525 233 HOH HOH A . D 4 HOH 26 526 304 HOH HOH A . D 4 HOH 27 527 222 HOH HOH A . D 4 HOH 28 528 269 HOH HOH A . D 4 HOH 29 529 505 HOH HOH A . D 4 HOH 30 530 440 HOH HOH A . D 4 HOH 31 531 383 HOH HOH A . D 4 HOH 32 532 134 HOH HOH A . D 4 HOH 33 533 385 HOH HOH A . D 4 HOH 34 534 32 HOH HOH A . D 4 HOH 35 535 390 HOH HOH A . D 4 HOH 36 536 283 HOH HOH A . D 4 HOH 37 537 107 HOH HOH A . D 4 HOH 38 538 26 HOH HOH A . D 4 HOH 39 539 470 HOH HOH A . D 4 HOH 40 540 56 HOH HOH A . D 4 HOH 41 541 417 HOH HOH A . D 4 HOH 42 542 212 HOH HOH A . D 4 HOH 43 543 413 HOH HOH A . D 4 HOH 44 544 175 HOH HOH A . D 4 HOH 45 545 401 HOH HOH A . D 4 HOH 46 546 196 HOH HOH A . D 4 HOH 47 547 157 HOH HOH A . D 4 HOH 48 548 478 HOH HOH A . D 4 HOH 49 549 7 HOH HOH A . D 4 HOH 50 550 125 HOH HOH A . D 4 HOH 51 551 284 HOH HOH A . D 4 HOH 52 552 31 HOH HOH A . D 4 HOH 53 553 290 HOH HOH A . D 4 HOH 54 554 501 HOH HOH A . D 4 HOH 55 555 186 HOH HOH A . D 4 HOH 56 556 356 HOH HOH A . D 4 HOH 57 557 211 HOH HOH A . D 4 HOH 58 558 36 HOH HOH A . D 4 HOH 59 559 464 HOH HOH A . D 4 HOH 60 560 23 HOH HOH A . D 4 HOH 61 561 1 HOH HOH A . D 4 HOH 62 562 43 HOH HOH A . D 4 HOH 63 563 301 HOH HOH A . D 4 HOH 64 564 114 HOH HOH A . D 4 HOH 65 565 9 HOH HOH A . D 4 HOH 66 566 292 HOH HOH A . D 4 HOH 67 567 85 HOH HOH A . D 4 HOH 68 568 73 HOH HOH A . D 4 HOH 69 569 259 HOH HOH A . D 4 HOH 70 570 108 HOH HOH A . D 4 HOH 71 571 47 HOH HOH A . D 4 HOH 72 572 216 HOH HOH A . D 4 HOH 73 573 127 HOH HOH A . D 4 HOH 74 574 165 HOH HOH A . D 4 HOH 75 575 35 HOH HOH A . D 4 HOH 76 576 277 HOH HOH A . D 4 HOH 77 577 15 HOH HOH A . D 4 HOH 78 578 382 HOH HOH A . D 4 HOH 79 579 75 HOH HOH A . D 4 HOH 80 580 21 HOH HOH A . D 4 HOH 81 581 263 HOH HOH A . D 4 HOH 82 582 156 HOH HOH A . D 4 HOH 83 583 375 HOH HOH A . D 4 HOH 84 584 203 HOH HOH A . D 4 HOH 85 585 364 HOH HOH A . D 4 HOH 86 586 146 HOH HOH A . D 4 HOH 87 587 238 HOH HOH A . D 4 HOH 88 588 174 HOH HOH A . D 4 HOH 89 589 12 HOH HOH A . D 4 HOH 90 590 3 HOH HOH A . D 4 HOH 91 591 83 HOH HOH A . D 4 HOH 92 592 254 HOH HOH A . D 4 HOH 93 593 444 HOH HOH A . D 4 HOH 94 594 268 HOH HOH A . D 4 HOH 95 595 93 HOH HOH A . D 4 HOH 96 596 321 HOH HOH A . D 4 HOH 97 597 326 HOH HOH A . D 4 HOH 98 598 113 HOH HOH A . D 4 HOH 99 599 11 HOH HOH A . D 4 HOH 100 600 63 HOH HOH A . D 4 HOH 101 601 245 HOH HOH A . D 4 HOH 102 602 191 HOH HOH A . D 4 HOH 103 603 117 HOH HOH A . D 4 HOH 104 604 74 HOH HOH A . D 4 HOH 105 605 59 HOH HOH A . D 4 HOH 106 606 182 HOH HOH A . D 4 HOH 107 607 381 HOH HOH A . D 4 HOH 108 608 271 HOH HOH A . D 4 HOH 109 609 479 HOH HOH A . D 4 HOH 110 610 358 HOH HOH A . D 4 HOH 111 611 103 HOH HOH A . D 4 HOH 112 612 477 HOH HOH A . D 4 HOH 113 613 153 HOH HOH A . D 4 HOH 114 614 202 HOH HOH A . D 4 HOH 115 615 152 HOH HOH A . D 4 HOH 116 616 179 HOH HOH A . D 4 HOH 117 617 49 HOH HOH A . D 4 HOH 118 618 110 HOH HOH A . D 4 HOH 119 619 137 HOH HOH A . D 4 HOH 120 620 145 HOH HOH A . D 4 HOH 121 621 68 HOH HOH A . D 4 HOH 122 622 447 HOH HOH A . D 4 HOH 123 623 37 HOH HOH A . D 4 HOH 124 624 337 HOH HOH A . D 4 HOH 125 625 279 HOH HOH A . D 4 HOH 126 626 181 HOH HOH A . D 4 HOH 127 627 141 HOH HOH A . D 4 HOH 128 628 443 HOH HOH A . D 4 HOH 129 629 217 HOH HOH A . D 4 HOH 130 630 6 HOH HOH A . D 4 HOH 131 631 330 HOH HOH A . D 4 HOH 132 632 187 HOH HOH A . D 4 HOH 133 633 484 HOH HOH A . D 4 HOH 134 634 151 HOH HOH A . D 4 HOH 135 635 135 HOH HOH A . D 4 HOH 136 636 267 HOH HOH A . D 4 HOH 137 637 18 HOH HOH A . D 4 HOH 138 638 425 HOH HOH A . D 4 HOH 139 639 166 HOH HOH A . D 4 HOH 140 640 91 HOH HOH A . D 4 HOH 141 641 100 HOH HOH A . D 4 HOH 142 642 133 HOH HOH A . D 4 HOH 143 643 192 HOH HOH A . D 4 HOH 144 644 41 HOH HOH A . D 4 HOH 145 645 10 HOH HOH A . D 4 HOH 146 646 361 HOH HOH A . D 4 HOH 147 647 221 HOH HOH A . D 4 HOH 148 648 67 HOH HOH A . D 4 HOH 149 649 251 HOH HOH A . D 4 HOH 150 650 48 HOH HOH A . D 4 HOH 151 651 332 HOH HOH A . D 4 HOH 152 652 410 HOH HOH A . D 4 HOH 153 653 287 HOH HOH A . D 4 HOH 154 654 514 HOH HOH A . D 4 HOH 155 655 46 HOH HOH A . D 4 HOH 156 656 353 HOH HOH A . D 4 HOH 157 657 384 HOH HOH A . D 4 HOH 158 658 414 HOH HOH A . D 4 HOH 159 659 24 HOH HOH A . D 4 HOH 160 660 264 HOH HOH A . D 4 HOH 161 661 294 HOH HOH A . D 4 HOH 162 662 163 HOH HOH A . D 4 HOH 163 663 389 HOH HOH A . D 4 HOH 164 664 472 HOH HOH A . D 4 HOH 165 665 158 HOH HOH A . D 4 HOH 166 666 130 HOH HOH A . D 4 HOH 167 667 522 HOH HOH A . D 4 HOH 168 668 338 HOH HOH A . D 4 HOH 169 669 19 HOH HOH A . D 4 HOH 170 670 50 HOH HOH A . D 4 HOH 171 671 87 HOH HOH A . D 4 HOH 172 672 481 HOH HOH A . D 4 HOH 173 673 20 HOH HOH A . D 4 HOH 174 674 128 HOH HOH A . D 4 HOH 175 675 14 HOH HOH A . D 4 HOH 176 676 431 HOH HOH A . D 4 HOH 177 677 416 HOH HOH A . D 4 HOH 178 678 407 HOH HOH A . D 4 HOH 179 679 331 HOH HOH A . D 4 HOH 180 680 78 HOH HOH A . D 4 HOH 181 681 17 HOH HOH A . D 4 HOH 182 682 76 HOH HOH A . D 4 HOH 183 683 415 HOH HOH A . D 4 HOH 184 684 272 HOH HOH A . D 4 HOH 185 685 397 HOH HOH A . D 4 HOH 186 686 65 HOH HOH A . D 4 HOH 187 687 432 HOH HOH A . D 4 HOH 188 688 81 HOH HOH A . D 4 HOH 189 689 38 HOH HOH A . D 4 HOH 190 690 428 HOH HOH A . D 4 HOH 191 691 71 HOH HOH A . D 4 HOH 192 692 439 HOH HOH A . D 4 HOH 193 693 406 HOH HOH A . D 4 HOH 194 694 400 HOH HOH A . D 4 HOH 195 695 442 HOH HOH A . D 4 HOH 196 696 162 HOH HOH A . D 4 HOH 197 697 94 HOH HOH A . D 4 HOH 198 698 369 HOH HOH A . D 4 HOH 199 699 168 HOH HOH A . D 4 HOH 200 700 77 HOH HOH A . D 4 HOH 201 701 422 HOH HOH A . D 4 HOH 202 702 388 HOH HOH A . D 4 HOH 203 703 149 HOH HOH A . D 4 HOH 204 704 510 HOH HOH A . D 4 HOH 205 705 16 HOH HOH A . D 4 HOH 206 706 5 HOH HOH A . D 4 HOH 207 707 42 HOH HOH A . D 4 HOH 208 708 205 HOH HOH A . D 4 HOH 209 709 298 HOH HOH A . D 4 HOH 210 710 232 HOH HOH A . D 4 HOH 211 711 341 HOH HOH A . D 4 HOH 212 712 297 HOH HOH A . D 4 HOH 213 713 28 HOH HOH A . D 4 HOH 214 714 408 HOH HOH A . D 4 HOH 215 715 312 HOH HOH A . D 4 HOH 216 716 190 HOH HOH A . D 4 HOH 217 717 393 HOH HOH A . D 4 HOH 218 718 405 HOH HOH A . D 4 HOH 219 719 374 HOH HOH A . D 4 HOH 220 720 148 HOH HOH A . D 4 HOH 221 721 355 HOH HOH A . D 4 HOH 222 722 70 HOH HOH A . D 4 HOH 223 723 499 HOH HOH A . D 4 HOH 224 724 25 HOH HOH A . D 4 HOH 225 725 8 HOH HOH A . D 4 HOH 226 726 29 HOH HOH A . D 4 HOH 227 727 286 HOH HOH A . D 4 HOH 228 728 58 HOH HOH A . D 4 HOH 229 729 368 HOH HOH A . D 4 HOH 230 730 116 HOH HOH A . D 4 HOH 231 731 170 HOH HOH A . D 4 HOH 232 732 240 HOH HOH A . D 4 HOH 233 733 347 HOH HOH A . D 4 HOH 234 734 324 HOH HOH A . D 4 HOH 235 735 197 HOH HOH A . D 4 HOH 236 736 194 HOH HOH A . D 4 HOH 237 737 343 HOH HOH A . D 4 HOH 238 738 102 HOH HOH A . D 4 HOH 239 739 171 HOH HOH A . D 4 HOH 240 740 198 HOH HOH A . D 4 HOH 241 741 441 HOH HOH A . D 4 HOH 242 742 303 HOH HOH A . D 4 HOH 243 743 112 HOH HOH A . D 4 HOH 244 744 79 HOH HOH A . D 4 HOH 245 745 482 HOH HOH A . D 4 HOH 246 746 4 HOH HOH A . D 4 HOH 247 747 53 HOH HOH A . D 4 HOH 248 748 45 HOH HOH A . D 4 HOH 249 749 391 HOH HOH A . D 4 HOH 250 750 30 HOH HOH A . D 4 HOH 251 751 328 HOH HOH A . D 4 HOH 252 752 311 HOH HOH A . D 4 HOH 253 753 204 HOH HOH A . D 4 HOH 254 754 80 HOH HOH A . D 4 HOH 255 755 262 HOH HOH A . D 4 HOH 256 756 424 HOH HOH A . D 4 HOH 257 757 90 HOH HOH A . D 4 HOH 258 758 280 HOH HOH A . D 4 HOH 259 759 247 HOH HOH A . D 4 HOH 260 760 27 HOH HOH A . D 4 HOH 261 761 88 HOH HOH A . D 4 HOH 262 762 367 HOH HOH A . D 4 HOH 263 763 44 HOH HOH A . D 4 HOH 264 764 51 HOH HOH A . D 4 HOH 265 765 136 HOH HOH A . D 4 HOH 266 766 195 HOH HOH A . D 4 HOH 267 767 359 HOH HOH A . D 4 HOH 268 768 64 HOH HOH A . D 4 HOH 269 769 89 HOH HOH A . D 4 HOH 270 770 139 HOH HOH A . D 4 HOH 271 771 229 HOH HOH A . D 4 HOH 272 772 92 HOH HOH A . D 4 HOH 273 773 69 HOH HOH A . D 4 HOH 274 774 98 HOH HOH A . D 4 HOH 275 775 2 HOH HOH A . D 4 HOH 276 776 104 HOH HOH A . D 4 HOH 277 777 300 HOH HOH A . D 4 HOH 278 778 86 HOH HOH A . D 4 HOH 279 779 160 HOH HOH A . D 4 HOH 280 780 274 HOH HOH A . D 4 HOH 281 781 218 HOH HOH A . D 4 HOH 282 782 52 HOH HOH A . D 4 HOH 283 783 403 HOH HOH A . D 4 HOH 284 784 66 HOH HOH A . D 4 HOH 285 785 60 HOH HOH A . D 4 HOH 286 786 411 HOH HOH A . D 4 HOH 287 787 371 HOH HOH A . D 4 HOH 288 788 237 HOH HOH A . D 4 HOH 289 789 183 HOH HOH A . D 4 HOH 290 790 483 HOH HOH A . D 4 HOH 291 791 161 HOH HOH A . D 4 HOH 292 792 132 HOH HOH A . D 4 HOH 293 793 387 HOH HOH A . D 4 HOH 294 794 244 HOH HOH A . D 4 HOH 295 795 239 HOH HOH A . D 4 HOH 296 796 140 HOH HOH A . D 4 HOH 297 797 184 HOH HOH A . D 4 HOH 298 798 105 HOH HOH A . D 4 HOH 299 799 119 HOH HOH A . D 4 HOH 300 800 412 HOH HOH A . D 4 HOH 301 801 122 HOH HOH A . D 4 HOH 302 802 266 HOH HOH A . D 4 HOH 303 803 124 HOH HOH A . D 4 HOH 304 804 111 HOH HOH A . D 4 HOH 305 805 291 HOH HOH A . D 4 HOH 306 806 13 HOH HOH A . D 4 HOH 307 807 317 HOH HOH A . D 4 HOH 308 808 159 HOH HOH A . D 4 HOH 309 809 480 HOH HOH A . D 4 HOH 310 810 61 HOH HOH A . D 4 HOH 311 811 409 HOH HOH A . D 4 HOH 312 812 427 HOH HOH A . D 4 HOH 313 813 180 HOH HOH A . D 4 HOH 314 814 129 HOH HOH A . D 4 HOH 315 815 120 HOH HOH A . D 4 HOH 316 816 485 HOH HOH A . D 4 HOH 317 817 167 HOH HOH A . D 4 HOH 318 818 435 HOH HOH A . D 4 HOH 319 819 33 HOH HOH A . D 4 HOH 320 820 126 HOH HOH A . D 4 HOH 321 821 308 HOH HOH A . D 4 HOH 322 822 22 HOH HOH A . D 4 HOH 323 823 172 HOH HOH A . D 4 HOH 324 824 209 HOH HOH A . D 4 HOH 325 825 289 HOH HOH A . D 4 HOH 326 826 502 HOH HOH A . D 4 HOH 327 827 438 HOH HOH A . D 4 HOH 328 828 437 HOH HOH A . D 4 HOH 329 829 144 HOH HOH A . D 4 HOH 330 830 334 HOH HOH A . D 4 HOH 331 831 433 HOH HOH A . D 4 HOH 332 832 106 HOH HOH A . D 4 HOH 333 833 306 HOH HOH A . D 4 HOH 334 834 260 HOH HOH A . D 4 HOH 335 835 39 HOH HOH A . D 4 HOH 336 836 517 HOH HOH A . D 4 HOH 337 837 520 HOH HOH A . D 4 HOH 338 838 404 HOH HOH A . D 4 HOH 339 839 236 HOH HOH A . D 4 HOH 340 840 418 HOH HOH A . D 4 HOH 341 841 84 HOH HOH A . D 4 HOH 342 842 55 HOH HOH A . D 4 HOH 343 843 243 HOH HOH A . D 4 HOH 344 844 511 HOH HOH A . D 4 HOH 345 845 512 HOH HOH A . D 4 HOH 346 846 82 HOH HOH A . D 4 HOH 347 847 446 HOH HOH A . D 4 HOH 348 848 223 HOH HOH A . D 4 HOH 349 849 342 HOH HOH A . D 4 HOH 350 850 395 HOH HOH A . D 4 HOH 351 851 421 HOH HOH A . D 4 HOH 352 852 224 HOH HOH A . D 4 HOH 353 853 519 HOH HOH A . D 4 HOH 354 854 392 HOH HOH A . D 4 HOH 355 855 354 HOH HOH A . D 4 HOH 356 856 169 HOH HOH A . D 4 HOH 357 857 377 HOH HOH A . D 4 HOH 358 858 109 HOH HOH A . D 4 HOH 359 859 471 HOH HOH A . D 4 HOH 360 860 246 HOH HOH A . D 4 HOH 361 861 154 HOH HOH A . D 4 HOH 362 862 350 HOH HOH A . D 4 HOH 363 863 299 HOH HOH A . D 4 HOH 364 864 380 HOH HOH A . D 4 HOH 365 865 357 HOH HOH A . D 4 HOH 366 866 423 HOH HOH A . D 4 HOH 367 867 296 HOH HOH A . D 4 HOH 368 868 379 HOH HOH A . D 4 HOH 369 869 207 HOH HOH A . D 4 HOH 370 870 473 HOH HOH A . D 4 HOH 371 871 396 HOH HOH A . D 4 HOH 372 872 339 HOH HOH A . D 4 HOH 373 873 54 HOH HOH A . D 4 HOH 374 874 265 HOH HOH A . D 4 HOH 375 875 118 HOH HOH A . D 4 HOH 376 876 349 HOH HOH A . D 4 HOH 377 877 72 HOH HOH A . D 4 HOH 378 878 370 HOH HOH A . D 4 HOH 379 879 504 HOH HOH A . D 4 HOH 380 880 360 HOH HOH A . D 4 HOH 381 881 363 HOH HOH A . D 4 HOH 382 882 386 HOH HOH A . D 4 HOH 383 883 506 HOH HOH A . D 4 HOH 384 884 220 HOH HOH A . D 4 HOH 385 885 282 HOH HOH A . D 4 HOH 386 886 475 HOH HOH A . D 4 HOH 387 887 329 HOH HOH A . D 4 HOH 388 888 500 HOH HOH A . D 4 HOH 389 889 227 HOH HOH A . D 4 HOH 390 890 445 HOH HOH A . D 4 HOH 391 891 521 HOH HOH A . D 4 HOH 392 892 448 HOH HOH A . D 4 HOH 393 893 208 HOH HOH A . D 4 HOH 394 894 57 HOH HOH A . D 4 HOH 395 895 210 HOH HOH A . D 4 HOH 396 896 348 HOH HOH A . D 4 HOH 397 897 453 HOH HOH A . D 4 HOH 398 898 340 HOH HOH A . D 4 HOH 399 899 518 HOH HOH A . D 4 HOH 400 900 101 HOH HOH A . D 4 HOH 401 901 99 HOH HOH A . D 4 HOH 402 902 143 HOH HOH A . D 4 HOH 403 903 199 HOH HOH A . D 4 HOH 404 904 193 HOH HOH A . D 4 HOH 405 905 394 HOH HOH A . D 4 HOH 406 906 319 HOH HOH A . D 4 HOH 407 907 461 HOH HOH A . D 4 HOH 408 908 288 HOH HOH A . D 4 HOH 409 909 200 HOH HOH A . D 4 HOH 410 910 450 HOH HOH A . D 4 HOH 411 911 250 HOH HOH A . D 4 HOH 412 912 513 HOH HOH A . D 4 HOH 413 913 316 HOH HOH A . D 4 HOH 414 914 486 HOH HOH A . D 4 HOH 415 915 452 HOH HOH A . D 4 HOH 416 916 503 HOH HOH A . D 4 HOH 417 917 493 HOH HOH A . D 4 HOH 418 918 458 HOH HOH A . D 4 HOH 419 919 225 HOH HOH A . D 4 HOH 420 920 462 HOH HOH A . D 4 HOH 421 921 515 HOH HOH A . D 4 HOH 422 922 322 HOH HOH A . D 4 HOH 423 923 188 HOH HOH A . D 4 HOH 424 924 219 HOH HOH A . D 4 HOH 425 925 333 HOH HOH A . D 4 HOH 426 926 173 HOH HOH A . D 4 HOH 427 927 62 HOH HOH A . D 4 HOH 428 928 256 HOH HOH A . D 4 HOH 429 929 147 HOH HOH A . D 4 HOH 430 930 215 HOH HOH A . D 4 HOH 431 931 456 HOH HOH A . D 4 HOH 432 932 142 HOH HOH A . D 4 HOH 433 933 278 HOH HOH A . D 4 HOH 434 934 273 HOH HOH A . D 4 HOH 435 935 335 HOH HOH A . D 4 HOH 436 936 523 HOH HOH A . D 4 HOH 437 937 261 HOH HOH A . D 4 HOH 438 938 248 HOH HOH A . D 4 HOH 439 939 313 HOH HOH A . D 4 HOH 440 940 488 HOH HOH A . D 4 HOH 441 941 295 HOH HOH A . D 4 HOH 442 942 509 HOH HOH A . D 4 HOH 443 943 97 HOH HOH A . D 4 HOH 444 944 489 HOH HOH A . D 4 HOH 445 945 491 HOH HOH A . D 4 HOH 446 946 309 HOH HOH A . D 4 HOH 447 947 399 HOH HOH A . D 4 HOH 448 948 436 HOH HOH A . D 4 HOH 449 949 366 HOH HOH A . D 4 HOH 450 950 315 HOH HOH A . D 4 HOH 451 951 249 HOH HOH A . D 4 HOH 452 952 276 HOH HOH A . D 4 HOH 453 953 419 HOH HOH A . D 4 HOH 454 954 344 HOH HOH A . D 4 HOH 455 955 115 HOH HOH A . D 4 HOH 456 956 494 HOH HOH A . D 4 HOH 457 957 305 HOH HOH A . D 4 HOH 458 958 465 HOH HOH A . D 4 HOH 459 959 323 HOH HOH A . D 4 HOH 460 960 468 HOH HOH A . D 4 HOH 461 961 449 HOH HOH A . D 4 HOH 462 962 467 HOH HOH A . D 4 HOH 463 963 314 HOH HOH A . D 4 HOH 464 964 451 HOH HOH A . D 4 HOH 465 965 454 HOH HOH A . D 4 HOH 466 966 255 HOH HOH A . D 4 HOH 467 967 226 HOH HOH A . D 4 HOH 468 968 492 HOH HOH A . D 4 HOH 469 969 496 HOH HOH A . D 4 HOH 470 970 177 HOH HOH A . D 4 HOH 471 971 185 HOH HOH A . D 4 HOH 472 972 325 HOH HOH A . D 4 HOH 473 973 231 HOH HOH A . D 4 HOH 474 974 285 HOH HOH A . D 4 HOH 475 975 508 HOH HOH A . D 4 HOH 476 976 372 HOH HOH A . D 4 HOH 477 977 365 HOH HOH A . D 4 HOH 478 978 429 HOH HOH A . D 4 HOH 479 979 293 HOH HOH A . D 4 HOH 480 980 495 HOH HOH A . D 4 HOH 481 981 307 HOH HOH A . D 4 HOH 482 982 213 HOH HOH A . D 4 HOH 483 983 257 HOH HOH A . D 4 HOH 484 984 352 HOH HOH A . D 4 HOH 485 985 362 HOH HOH A . D 4 HOH 486 986 95 HOH HOH A . D 4 HOH 487 987 487 HOH HOH A . D 4 HOH 488 988 164 HOH HOH A . D 4 HOH 489 989 460 HOH HOH A . D 4 HOH 490 990 123 HOH HOH A . D 4 HOH 491 991 516 HOH HOH A . D 4 HOH 492 992 230 HOH HOH A . D 4 HOH 493 993 201 HOH HOH A . D 4 HOH 494 994 474 HOH HOH A . D 4 HOH 495 995 402 HOH HOH A . D 4 HOH 496 996 459 HOH HOH A . D 4 HOH 497 997 497 HOH HOH A . D 4 HOH 498 998 327 HOH HOH A . D 4 HOH 499 999 466 HOH HOH A . D 4 HOH 500 1000 318 HOH HOH A . D 4 HOH 501 1001 252 HOH HOH A . D 4 HOH 502 1002 507 HOH HOH A . D 4 HOH 503 1003 524 HOH HOH A . D 4 HOH 504 1004 214 HOH HOH A . D 4 HOH 505 1005 302 HOH HOH A . D 4 HOH 506 1006 346 HOH HOH A . D 4 HOH 507 1007 310 HOH HOH A . D 4 HOH 508 1008 345 HOH HOH A . D 4 HOH 509 1009 490 HOH HOH A . D 4 HOH 510 1010 420 HOH HOH A . D 4 HOH 511 1011 426 HOH HOH A . D 4 HOH 512 1012 476 HOH HOH A . D 4 HOH 513 1013 455 HOH HOH A . D 4 HOH 514 1014 138 HOH HOH A . D 4 HOH 515 1015 270 HOH HOH A . D 4 HOH 516 1016 434 HOH HOH A . D 4 HOH 517 1017 189 HOH HOH A . D 4 HOH 518 1018 398 HOH HOH A . D 4 HOH 519 1019 373 HOH HOH A . D 4 HOH 520 1020 469 HOH HOH A . D 4 HOH 521 1021 228 HOH HOH A . D 4 HOH 522 1022 457 HOH HOH A . D 4 HOH 523 1023 498 HOH HOH A . D 4 HOH 524 1024 463 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-28 2 'Structure model' 1 1 2015-11-11 3 'Structure model' 1 2 2015-11-25 4 'Structure model' 1 3 2017-09-06 5 'Structure model' 1 4 2019-12-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0124 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 554 ? ? O A HOH 571 ? ? 1.12 2 1 O A HOH 529 ? ? O A HOH 637 ? ? 1.27 3 1 O A HOH 605 ? ? O A HOH 695 ? ? 1.32 4 1 O A HOH 622 ? ? O A HOH 820 ? ? 1.37 5 1 O A HOH 797 ? ? O A HOH 827 ? ? 1.52 6 1 O A HOH 539 ? ? O A HOH 921 ? ? 1.59 7 1 O A HOH 501 ? ? O A HOH 909 ? ? 1.67 8 1 O A ARG 87 ? ? O A HOH 501 ? ? 1.74 9 1 O A HOH 502 ? ? O A HOH 873 ? ? 1.74 10 1 O A HOH 667 ? ? O A HOH 861 ? ? 1.81 11 1 O A HOH 518 ? ? O A HOH 638 ? ? 1.81 12 1 O A HOH 704 ? ? O A HOH 921 ? ? 1.83 13 1 O A HOH 676 ? ? O A HOH 758 ? ? 1.86 14 1 O A HOH 663 ? ? O A HOH 873 ? ? 1.87 15 1 O A HOH 695 ? ? O A HOH 802 ? ? 2.03 16 1 O A HOH 818 ? ? O A HOH 946 ? ? 2.03 17 1 UNK A UNX 402 ? ? O A HOH 645 ? ? 2.07 18 1 O A HOH 506 ? ? O A HOH 633 ? ? 2.07 19 1 NH1 A ARG 82 ? ? O A HOH 502 ? ? 2.08 20 1 O1P A AMP 401 ? ? UNK A UNX 402 ? ? 2.10 21 1 UNK A UNX 402 ? ? O A HOH 511 ? ? 2.14 22 1 O A HOH 510 ? ? O A HOH 946 ? ? 2.14 23 1 O A HOH 576 ? ? O A HOH 924 ? ? 2.14 24 1 O A HOH 507 ? ? O A HOH 940 ? ? 2.17 25 1 UNK A UNX 402 ? ? O A HOH 514 ? ? 2.18 26 1 UNK A UNX 402 ? ? O A HOH 565 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 607 ? ? 1_555 O A HOH 767 ? ? 3_465 2.15 2 1 O A HOH 609 ? ? 1_555 O A HOH 853 ? ? 3_565 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A THR 33 ? ? CG2 A THR 33 ? ? 1.319 1.519 -0.200 0.033 N 2 1 CA A CYS 34 ? ? CB A CYS 34 ? ? 1.668 1.535 0.133 0.022 N 3 1 CB A CYS 34 ? ? SG A CYS 34 ? ? 1.657 1.812 -0.155 0.016 N 4 1 CD A GLU 115 ? ? OE1 A GLU 115 ? ? 1.336 1.252 0.084 0.011 N 5 1 CB A THR 199 ? ? CG2 A THR 199 ? ? 1.309 1.519 -0.210 0.033 N 6 1 CG A GLU 294 ? ? CD A GLU 294 ? ? 1.611 1.515 0.096 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A LYS 38 ? ? CE A LYS 38 ? ? NZ A LYS 38 ? ? 94.64 111.70 -17.06 2.30 N 2 1 NE A ARG 62 ? ? CZ A ARG 62 ? ? NH2 A ARG 62 ? ? 117.01 120.30 -3.29 0.50 N 3 1 NE A ARG 85 ? ? CZ A ARG 85 ? ? NH2 A ARG 85 ? ? 117.10 120.30 -3.20 0.50 N 4 1 CB A ASP 172 ? ? CG A ASP 172 ? ? OD1 A ASP 172 ? ? 125.93 118.30 7.63 0.90 N 5 1 CB A ASP 286 ? ? CG A ASP 286 ? ? OD1 A ASP 286 ? ? 124.67 118.30 6.37 0.90 N 6 1 CB A LEU 319 ? ? CG A LEU 319 ? ? CD1 A LEU 319 ? ? 123.31 111.00 12.31 1.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 30 ? ? 47.35 -129.49 2 1 ASP A 53 ? ? 83.80 -6.93 3 1 ASP A 59 ? ? -168.84 105.13 4 1 ASP A 182 ? ? 51.81 -124.68 5 1 ASN A 290 ? ? -162.34 59.47 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 1024 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.95 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM42498 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ADENOSINE MONOPHOSPHATE' AMP 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH #