data_5CP5 # _entry.id 5CP5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CP5 pdb_00005cp5 10.2210/pdb5cp5/pdb WWPDB D_1000211997 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-13 2 'Structure model' 1 1 2016-01-27 3 'Structure model' 1 2 2016-03-09 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' citation 4 4 'Structure model' database_2 5 4 'Structure model' diffrn_radiation_wavelength 6 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CP5 _pdbx_database_status.recvd_initial_deposition_date 2015-07-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5COI PDB . unspecified 5CPE PDB . unspecified 5CQT PDB . unspecified 5CRM PDB . unspecified 5CRZ PDB . unspecified 5CS8 PDB . unspecified 5CTL PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, Y.' 1 'Song, M.' 2 'Liu, Z.' 3 'Xue, X.' 4 'Xu, Y.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 59 _citation.language ? _citation.page_first 1565 _citation.page_last 1579 _citation.title ;Discovery of Benzo[cd]indol-2(1H)-ones as Potent and Specific BET Bromodomain Inhibitors: Structure-Based Virtual Screening, Optimization, and Biological Evaluation ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.5b01511 _citation.pdbx_database_id_PubMed 26731490 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xue, X.' 1 ? primary 'Zhang, Y.' 2 ? primary 'Liu, Z.' 3 ? primary 'Song, M.' 4 ? primary 'Xing, Y.' 5 ? primary 'Xiang, Q.' 6 ? primary 'Wang, Z.' 7 ? primary 'Tu, Z.' 8 ? primary 'Zhou, Y.' 9 ? primary 'Ding, K.' 10 ? primary 'Xu, Y.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 16767.326 1 ? ? 'N-TERMINAL BROMODOMAIN, UNP RESIDUES 44-168' ? 2 non-polymer syn '1-ethyl-N-(4-fluorophenyl)-2-oxo-1,2-dihydrobenzo[cd]indole-6-sulfonamide' 370.397 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 5 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKKGHHHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;MKKGHHHHHHLVPRGSNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDM GTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1-ethyl-N-(4-fluorophenyl)-2-oxo-1,2-dihydrobenzo[cd]indole-6-sulfonamide' EB0 3 1,2-ETHANEDIOL EDO 4 'NITRATE ION' NO3 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LYS n 1 4 GLY n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 LEU n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 GLY n 1 16 SER n 1 17 ASN n 1 18 PRO n 1 19 PRO n 1 20 PRO n 1 21 PRO n 1 22 GLU n 1 23 THR n 1 24 SER n 1 25 ASN n 1 26 PRO n 1 27 ASN n 1 28 LYS n 1 29 PRO n 1 30 LYS n 1 31 ARG n 1 32 GLN n 1 33 THR n 1 34 ASN n 1 35 GLN n 1 36 LEU n 1 37 GLN n 1 38 TYR n 1 39 LEU n 1 40 LEU n 1 41 ARG n 1 42 VAL n 1 43 VAL n 1 44 LEU n 1 45 LYS n 1 46 THR n 1 47 LEU n 1 48 TRP n 1 49 LYS n 1 50 HIS n 1 51 GLN n 1 52 PHE n 1 53 ALA n 1 54 TRP n 1 55 PRO n 1 56 PHE n 1 57 GLN n 1 58 GLN n 1 59 PRO n 1 60 VAL n 1 61 ASP n 1 62 ALA n 1 63 VAL n 1 64 LYS n 1 65 LEU n 1 66 ASN n 1 67 LEU n 1 68 PRO n 1 69 ASP n 1 70 TYR n 1 71 TYR n 1 72 LYS n 1 73 ILE n 1 74 ILE n 1 75 LYS n 1 76 THR n 1 77 PRO n 1 78 MET n 1 79 ASP n 1 80 MET n 1 81 GLY n 1 82 THR n 1 83 ILE n 1 84 LYS n 1 85 LYS n 1 86 ARG n 1 87 LEU n 1 88 GLU n 1 89 ASN n 1 90 ASN n 1 91 TYR n 1 92 TYR n 1 93 TRP n 1 94 ASN n 1 95 ALA n 1 96 GLN n 1 97 GLU n 1 98 CYS n 1 99 ILE n 1 100 GLN n 1 101 ASP n 1 102 PHE n 1 103 ASN n 1 104 THR n 1 105 MET n 1 106 PHE n 1 107 THR n 1 108 ASN n 1 109 CYS n 1 110 TYR n 1 111 ILE n 1 112 TYR n 1 113 ASN n 1 114 LYS n 1 115 PRO n 1 116 GLY n 1 117 ASP n 1 118 ASP n 1 119 ILE n 1 120 VAL n 1 121 LEU n 1 122 MET n 1 123 ALA n 1 124 GLU n 1 125 ALA n 1 126 LEU n 1 127 GLU n 1 128 LYS n 1 129 LEU n 1 130 PHE n 1 131 LEU n 1 132 GLN n 1 133 LYS n 1 134 ILE n 1 135 ASN n 1 136 GLU n 1 137 LEU n 1 138 PRO n 1 139 THR n 1 140 GLU n 1 141 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 141 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EB0 non-polymer . '1-ethyl-N-(4-fluorophenyl)-2-oxo-1,2-dihydrobenzo[cd]indole-6-sulfonamide' ? 'C19 H15 F N2 O3 S' 370.397 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 28 ? ? ? A . n A 1 2 LYS 2 29 ? ? ? A . n A 1 3 LYS 3 30 ? ? ? A . n A 1 4 GLY 4 31 ? ? ? A . n A 1 5 HIS 5 32 ? ? ? A . n A 1 6 HIS 6 33 ? ? ? A . n A 1 7 HIS 7 34 ? ? ? A . n A 1 8 HIS 8 35 ? ? ? A . n A 1 9 HIS 9 36 ? ? ? A . n A 1 10 HIS 10 37 ? ? ? A . n A 1 11 LEU 11 38 ? ? ? A . n A 1 12 VAL 12 39 ? ? ? A . n A 1 13 PRO 13 40 40 PRO PRO A . n A 1 14 ARG 14 41 41 ARG ARG A . n A 1 15 GLY 15 42 42 GLY GLY A . n A 1 16 SER 16 43 43 SER SER A . n A 1 17 ASN 17 44 44 ASN ASN A . n A 1 18 PRO 18 45 45 PRO PRO A . n A 1 19 PRO 19 46 46 PRO PRO A . n A 1 20 PRO 20 47 47 PRO PRO A . n A 1 21 PRO 21 48 48 PRO PRO A . n A 1 22 GLU 22 49 49 GLU GLU A . n A 1 23 THR 23 50 50 THR THR A . n A 1 24 SER 24 51 51 SER SER A . n A 1 25 ASN 25 52 52 ASN ASN A . n A 1 26 PRO 26 53 53 PRO PRO A . n A 1 27 ASN 27 54 54 ASN ASN A . n A 1 28 LYS 28 55 55 LYS LYS A . n A 1 29 PRO 29 56 56 PRO PRO A . n A 1 30 LYS 30 57 57 LYS LYS A . n A 1 31 ARG 31 58 58 ARG ARG A . n A 1 32 GLN 32 59 59 GLN GLN A . n A 1 33 THR 33 60 60 THR THR A . n A 1 34 ASN 34 61 61 ASN ASN A . n A 1 35 GLN 35 62 62 GLN GLN A . n A 1 36 LEU 36 63 63 LEU LEU A . n A 1 37 GLN 37 64 64 GLN GLN A . n A 1 38 TYR 38 65 65 TYR TYR A . n A 1 39 LEU 39 66 66 LEU LEU A . n A 1 40 LEU 40 67 67 LEU LEU A . n A 1 41 ARG 41 68 68 ARG ARG A . n A 1 42 VAL 42 69 69 VAL VAL A . n A 1 43 VAL 43 70 70 VAL VAL A . n A 1 44 LEU 44 71 71 LEU LEU A . n A 1 45 LYS 45 72 72 LYS LYS A . n A 1 46 THR 46 73 73 THR THR A . n A 1 47 LEU 47 74 74 LEU LEU A . n A 1 48 TRP 48 75 75 TRP TRP A . n A 1 49 LYS 49 76 76 LYS LYS A . n A 1 50 HIS 50 77 77 HIS HIS A . n A 1 51 GLN 51 78 78 GLN GLN A . n A 1 52 PHE 52 79 79 PHE PHE A . n A 1 53 ALA 53 80 80 ALA ALA A . n A 1 54 TRP 54 81 81 TRP TRP A . n A 1 55 PRO 55 82 82 PRO PRO A . n A 1 56 PHE 56 83 83 PHE PHE A . n A 1 57 GLN 57 84 84 GLN GLN A . n A 1 58 GLN 58 85 85 GLN GLN A . n A 1 59 PRO 59 86 86 PRO PRO A . n A 1 60 VAL 60 87 87 VAL VAL A . n A 1 61 ASP 61 88 88 ASP ASP A . n A 1 62 ALA 62 89 89 ALA ALA A . n A 1 63 VAL 63 90 90 VAL VAL A . n A 1 64 LYS 64 91 91 LYS LYS A . n A 1 65 LEU 65 92 92 LEU LEU A . n A 1 66 ASN 66 93 93 ASN ASN A . n A 1 67 LEU 67 94 94 LEU LEU A . n A 1 68 PRO 68 95 95 PRO PRO A . n A 1 69 ASP 69 96 96 ASP ASP A . n A 1 70 TYR 70 97 97 TYR TYR A . n A 1 71 TYR 71 98 98 TYR TYR A . n A 1 72 LYS 72 99 99 LYS LYS A . n A 1 73 ILE 73 100 100 ILE ILE A . n A 1 74 ILE 74 101 101 ILE ILE A . n A 1 75 LYS 75 102 102 LYS LYS A . n A 1 76 THR 76 103 103 THR THR A . n A 1 77 PRO 77 104 104 PRO PRO A . n A 1 78 MET 78 105 105 MET MET A . n A 1 79 ASP 79 106 106 ASP ASP A . n A 1 80 MET 80 107 107 MET MET A . n A 1 81 GLY 81 108 108 GLY GLY A . n A 1 82 THR 82 109 109 THR THR A . n A 1 83 ILE 83 110 110 ILE ILE A . n A 1 84 LYS 84 111 111 LYS LYS A . n A 1 85 LYS 85 112 112 LYS LYS A . n A 1 86 ARG 86 113 113 ARG ARG A . n A 1 87 LEU 87 114 114 LEU LEU A . n A 1 88 GLU 88 115 115 GLU GLU A . n A 1 89 ASN 89 116 116 ASN ASN A . n A 1 90 ASN 90 117 117 ASN ASN A . n A 1 91 TYR 91 118 118 TYR TYR A . n A 1 92 TYR 92 119 119 TYR TYR A . n A 1 93 TRP 93 120 120 TRP TRP A . n A 1 94 ASN 94 121 121 ASN ASN A . n A 1 95 ALA 95 122 122 ALA ALA A . n A 1 96 GLN 96 123 123 GLN GLN A . n A 1 97 GLU 97 124 124 GLU GLU A . n A 1 98 CYS 98 125 125 CYS CYS A . n A 1 99 ILE 99 126 126 ILE ILE A . n A 1 100 GLN 100 127 127 GLN GLN A . n A 1 101 ASP 101 128 128 ASP ASP A . n A 1 102 PHE 102 129 129 PHE PHE A . n A 1 103 ASN 103 130 130 ASN ASN A . n A 1 104 THR 104 131 131 THR THR A . n A 1 105 MET 105 132 132 MET MET A . n A 1 106 PHE 106 133 133 PHE PHE A . n A 1 107 THR 107 134 134 THR THR A . n A 1 108 ASN 108 135 135 ASN ASN A . n A 1 109 CYS 109 136 136 CYS CYS A . n A 1 110 TYR 110 137 137 TYR TYR A . n A 1 111 ILE 111 138 138 ILE ILE A . n A 1 112 TYR 112 139 139 TYR TYR A . n A 1 113 ASN 113 140 140 ASN ASN A . n A 1 114 LYS 114 141 141 LYS LYS A . n A 1 115 PRO 115 142 142 PRO PRO A . n A 1 116 GLY 116 143 143 GLY GLY A . n A 1 117 ASP 117 144 144 ASP ASP A . n A 1 118 ASP 118 145 145 ASP ASP A . n A 1 119 ILE 119 146 146 ILE ILE A . n A 1 120 VAL 120 147 147 VAL VAL A . n A 1 121 LEU 121 148 148 LEU LEU A . n A 1 122 MET 122 149 149 MET MET A . n A 1 123 ALA 123 150 150 ALA ALA A . n A 1 124 GLU 124 151 151 GLU GLU A . n A 1 125 ALA 125 152 152 ALA ALA A . n A 1 126 LEU 126 153 153 LEU LEU A . n A 1 127 GLU 127 154 154 GLU GLU A . n A 1 128 LYS 128 155 155 LYS LYS A . n A 1 129 LEU 129 156 156 LEU LEU A . n A 1 130 PHE 130 157 157 PHE PHE A . n A 1 131 LEU 131 158 158 LEU LEU A . n A 1 132 GLN 132 159 159 GLN GLN A . n A 1 133 LYS 133 160 160 LYS LYS A . n A 1 134 ILE 134 161 161 ILE ILE A . n A 1 135 ASN 135 162 162 ASN ASN A . n A 1 136 GLU 136 163 163 GLU GLU A . n A 1 137 LEU 137 164 164 LEU LEU A . n A 1 138 PRO 138 165 165 PRO PRO A . n A 1 139 THR 139 166 166 THR THR A . n A 1 140 GLU 140 167 ? ? ? A . n A 1 141 GLU 141 168 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EB0 1 201 1 EB0 EB0 A . C 3 EDO 1 202 1 EDO EDO A . D 4 NO3 1 203 1 NO3 NO3 A . E 5 HOH 1 301 74 HOH HOH A . E 5 HOH 2 302 22 HOH HOH A . E 5 HOH 3 303 47 HOH HOH A . E 5 HOH 4 304 2 HOH HOH A . E 5 HOH 5 305 52 HOH HOH A . E 5 HOH 6 306 38 HOH HOH A . E 5 HOH 7 307 82 HOH HOH A . E 5 HOH 8 308 23 HOH HOH A . E 5 HOH 9 309 32 HOH HOH A . E 5 HOH 10 310 62 HOH HOH A . E 5 HOH 11 311 25 HOH HOH A . E 5 HOH 12 312 75 HOH HOH A . E 5 HOH 13 313 49 HOH HOH A . E 5 HOH 14 314 15 HOH HOH A . E 5 HOH 15 315 56 HOH HOH A . E 5 HOH 16 316 16 HOH HOH A . E 5 HOH 17 317 36 HOH HOH A . E 5 HOH 18 318 26 HOH HOH A . E 5 HOH 19 319 21 HOH HOH A . E 5 HOH 20 320 20 HOH HOH A . E 5 HOH 21 321 37 HOH HOH A . E 5 HOH 22 322 39 HOH HOH A . E 5 HOH 23 323 5 HOH HOH A . E 5 HOH 24 324 76 HOH HOH A . E 5 HOH 25 325 10 HOH HOH A . E 5 HOH 26 326 63 HOH HOH A . E 5 HOH 27 327 44 HOH HOH A . E 5 HOH 28 328 19 HOH HOH A . E 5 HOH 29 329 66 HOH HOH A . E 5 HOH 30 330 18 HOH HOH A . E 5 HOH 31 331 9 HOH HOH A . E 5 HOH 32 332 4 HOH HOH A . E 5 HOH 33 333 51 HOH HOH A . E 5 HOH 34 334 11 HOH HOH A . E 5 HOH 35 335 71 HOH HOH A . E 5 HOH 36 336 73 HOH HOH A . E 5 HOH 37 337 7 HOH HOH A . E 5 HOH 38 338 69 HOH HOH A . E 5 HOH 39 339 28 HOH HOH A . E 5 HOH 40 340 83 HOH HOH A . E 5 HOH 41 341 84 HOH HOH A . E 5 HOH 42 342 1 HOH HOH A . E 5 HOH 43 343 13 HOH HOH A . E 5 HOH 44 344 27 HOH HOH A . E 5 HOH 45 345 72 HOH HOH A . E 5 HOH 46 346 40 HOH HOH A . E 5 HOH 47 347 50 HOH HOH A . E 5 HOH 48 348 65 HOH HOH A . E 5 HOH 49 349 58 HOH HOH A . E 5 HOH 50 350 12 HOH HOH A . E 5 HOH 51 351 30 HOH HOH A . E 5 HOH 52 352 33 HOH HOH A . E 5 HOH 53 353 17 HOH HOH A . E 5 HOH 54 354 3 HOH HOH A . E 5 HOH 55 355 29 HOH HOH A . E 5 HOH 56 356 61 HOH HOH A . E 5 HOH 57 357 8 HOH HOH A . E 5 HOH 58 358 70 HOH HOH A . E 5 HOH 59 359 14 HOH HOH A . E 5 HOH 60 360 31 HOH HOH A . E 5 HOH 61 361 55 HOH HOH A . E 5 HOH 62 362 34 HOH HOH A . E 5 HOH 63 363 42 HOH HOH A . E 5 HOH 64 364 59 HOH HOH A . E 5 HOH 65 365 35 HOH HOH A . E 5 HOH 66 366 45 HOH HOH A . E 5 HOH 67 367 24 HOH HOH A . E 5 HOH 68 368 64 HOH HOH A . E 5 HOH 69 369 85 HOH HOH A . E 5 HOH 70 370 46 HOH HOH A . E 5 HOH 71 371 86 HOH HOH A . E 5 HOH 72 372 6 HOH HOH A . E 5 HOH 73 373 60 HOH HOH A . E 5 HOH 74 374 53 HOH HOH A . E 5 HOH 75 375 54 HOH HOH A . E 5 HOH 76 376 43 HOH HOH A . E 5 HOH 77 377 80 HOH HOH A . E 5 HOH 78 378 48 HOH HOH A . E 5 HOH 79 379 81 HOH HOH A . E 5 HOH 80 380 67 HOH HOH A . E 5 HOH 81 381 79 HOH HOH A . E 5 HOH 82 382 41 HOH HOH A . E 5 HOH 83 383 68 HOH HOH A . E 5 HOH 84 384 57 HOH HOH A . E 5 HOH 85 385 77 HOH HOH A . E 5 HOH 86 386 78 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.12 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0124 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5CP5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.670 _cell.length_a_esd ? _cell.length_b 47.340 _cell.length_b_esd ? _cell.length_c 77.580 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CP5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CP5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.2M (NH4)2SO4, 0.1M HEPES, 10% EtGhly, pH7.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-03-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97776 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type OTHER _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97776 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CP5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.790 _reflns.d_resolution_low 47.340 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11567 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 89.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.800 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 218 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.023 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 136769 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.790 1.830 ? 8.300 8105 ? ? 746 ? 100.000 ? ? ? ? 0.267 ? ? ? ? ? ? ? ? 10.900 ? ? ? ? ? 0.084 0 1 1 0.985 ? 8.950 47.340 ? 28.900 1348 ? ? 136 ? 99.700 ? ? ? ? 0.063 ? ? ? ? ? ? ? ? 9.900 ? ? ? ? ? 0.019 0 2 1 0.998 ? # _refine.aniso_B[1][1] 1.6400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.4600 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.1700 _refine.B_iso_max 54.240 _refine.B_iso_mean 20.8320 _refine.B_iso_min 11.470 _refine.correlation_coeff_Fo_to_Fc 0.9490 _refine.correlation_coeff_Fo_to_Fc_free 0.9140 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5CP5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7900 _refine.ls_d_res_low 40.4100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10948 _refine.ls_number_reflns_R_free 579 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 89.1400 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1966 _refine.ls_R_factor_R_free 0.2423 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1943 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1600 _refine.pdbx_overall_ESU_R_Free 0.1500 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.7410 _refine.overall_SU_ML 0.0870 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.7900 _refine_hist.d_res_low 40.4100 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 1177 _refine_hist.pdbx_number_residues_total 127 _refine_hist.pdbx_B_iso_mean_ligand 22.08 _refine_hist.pdbx_B_iso_mean_solvent 28.67 _refine_hist.pdbx_number_atoms_protein 1057 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.020 1123 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 1063 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.489 2.003 1529 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.974 3.004 2453 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.742 5.000 126 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.840 25.472 53 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.064 15.000 193 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.257 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.072 0.200 158 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.021 1249 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 257 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.269 1.905 507 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.259 1.902 506 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.994 2.847 632 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.7900 _refine_ls_shell.d_res_low 1.8360 _refine_ls_shell.number_reflns_all 921 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_R_work 872 _refine_ls_shell.percent_reflns_obs 99.8900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2960 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2030 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5CP5 _struct.title 'Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CP5 _struct_keywords.text 'BRD4, Bromodomain, Four Alpha Helices, Transcription-transcr, SIGNALING PROTEIN-INHIBITOR complex' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN/INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _struct_ref.pdbx_align_begin 44 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5CP5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 17 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 141 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CP5 MET A 1 ? UNP O60885 ? ? 'initiating methionine' 28 1 1 5CP5 LYS A 2 ? UNP O60885 ? ? 'expression tag' 29 2 1 5CP5 LYS A 3 ? UNP O60885 ? ? 'expression tag' 30 3 1 5CP5 GLY A 4 ? UNP O60885 ? ? 'expression tag' 31 4 1 5CP5 HIS A 5 ? UNP O60885 ? ? 'expression tag' 32 5 1 5CP5 HIS A 6 ? UNP O60885 ? ? 'expression tag' 33 6 1 5CP5 HIS A 7 ? UNP O60885 ? ? 'expression tag' 34 7 1 5CP5 HIS A 8 ? UNP O60885 ? ? 'expression tag' 35 8 1 5CP5 HIS A 9 ? UNP O60885 ? ? 'expression tag' 36 9 1 5CP5 HIS A 10 ? UNP O60885 ? ? 'expression tag' 37 10 1 5CP5 LEU A 11 ? UNP O60885 ? ? 'expression tag' 38 11 1 5CP5 VAL A 12 ? UNP O60885 ? ? 'expression tag' 39 12 1 5CP5 PRO A 13 ? UNP O60885 ? ? 'expression tag' 40 13 1 5CP5 ARG A 14 ? UNP O60885 ? ? 'expression tag' 41 14 1 5CP5 GLY A 15 ? UNP O60885 ? ? 'expression tag' 42 15 1 5CP5 SER A 16 ? UNP O60885 ? ? 'expression tag' 43 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 390 ? 1 MORE 4 ? 1 'SSA (A^2)' 7440 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 33 ? VAL A 42 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 AA2 VAL A 42 ? HIS A 50 ? VAL A 69 HIS A 77 1 ? 9 HELX_P HELX_P3 AA3 ALA A 53 ? GLN A 57 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 AA4 ASP A 69 ? ILE A 74 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 AA5 ASP A 79 ? ASN A 89 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 AA6 ASN A 94 ? ASN A 113 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 AA7 ASP A 117 ? GLU A 136 ? ASP A 144 GLU A 163 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 14 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 41 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 15 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 42 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -10.80 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EB0 201 ? 12 'binding site for residue EB0 A 201' AC2 Software A EDO 202 ? 5 'binding site for residue EDO A 202' AC3 Software A NO3 203 ? 3 'binding site for residue NO3 A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 TRP A 54 ? TRP A 81 . ? 1_555 ? 2 AC1 12 PRO A 55 ? PRO A 82 . ? 1_555 ? 3 AC1 12 PHE A 56 ? PHE A 83 . ? 1_555 ? 4 AC1 12 VAL A 60 ? VAL A 87 . ? 1_555 ? 5 AC1 12 LEU A 65 ? LEU A 92 . ? 1_555 ? 6 AC1 12 LYS A 72 ? LYS A 99 . ? 4_555 ? 7 AC1 12 ASN A 113 ? ASN A 140 . ? 1_555 ? 8 AC1 12 ASP A 118 ? ASP A 145 . ? 1_555 ? 9 AC1 12 ILE A 119 ? ILE A 146 . ? 1_555 ? 10 AC1 12 MET A 122 ? MET A 149 . ? 1_555 ? 11 AC1 12 HOH E . ? HOH A 302 . ? 1_555 ? 12 AC1 12 HOH E . ? HOH A 329 . ? 1_555 ? 13 AC2 5 ILE A 73 ? ILE A 100 . ? 1_555 ? 14 AC2 5 ILE A 74 ? ILE A 101 . ? 1_555 ? 15 AC2 5 LYS A 75 ? LYS A 102 . ? 1_555 ? 16 AC2 5 THR A 76 ? THR A 103 . ? 1_555 ? 17 AC2 5 ASN A 108 ? ASN A 135 . ? 1_555 ? 18 AC3 3 GLY A 81 ? GLY A 108 . ? 1_555 ? 19 AC3 3 THR A 82 ? THR A 109 . ? 1_555 ? 20 AC3 3 LYS A 85 ? LYS A 112 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 41 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 174.98 _pdbx_validate_torsion.psi 146.06 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 28 ? A MET 1 2 1 Y 1 A LYS 29 ? A LYS 2 3 1 Y 1 A LYS 30 ? A LYS 3 4 1 Y 1 A GLY 31 ? A GLY 4 5 1 Y 1 A HIS 32 ? A HIS 5 6 1 Y 1 A HIS 33 ? A HIS 6 7 1 Y 1 A HIS 34 ? A HIS 7 8 1 Y 1 A HIS 35 ? A HIS 8 9 1 Y 1 A HIS 36 ? A HIS 9 10 1 Y 1 A HIS 37 ? A HIS 10 11 1 Y 1 A LEU 38 ? A LEU 11 12 1 Y 1 A VAL 39 ? A VAL 12 13 1 Y 1 A GLU 167 ? A GLU 140 14 1 Y 1 A GLU 168 ? A GLU 141 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EB0 CAO C N N 88 EB0 CAN C N N 89 EB0 NAK N N N 90 EB0 CAL C N N 91 EB0 OAM O N N 92 EB0 CAJ C Y N 93 EB0 CAI C Y N 94 EB0 CAH C Y N 95 EB0 CAG C Y N 96 EB0 CAD C Y N 97 EB0 CAE C Y N 98 EB0 CAF C Y N 99 EB0 CAA C Y N 100 EB0 CAB C Y N 101 EB0 CAC C Y N 102 EB0 SAP S N N 103 EB0 OAQ O N N 104 EB0 OAR O N N 105 EB0 NAS N N N 106 EB0 CAT C Y N 107 EB0 CAU C Y N 108 EB0 CAV C Y N 109 EB0 CAW C Y N 110 EB0 FAZ F N N 111 EB0 CAX C Y N 112 EB0 CAY C Y N 113 EB0 H1 H N N 114 EB0 H2 H N N 115 EB0 H3 H N N 116 EB0 H4 H N N 117 EB0 H5 H N N 118 EB0 H6 H N N 119 EB0 H7 H N N 120 EB0 H8 H N N 121 EB0 H9 H N N 122 EB0 H10 H N N 123 EB0 H11 H N N 124 EB0 H12 H N N 125 EB0 H13 H N N 126 EB0 H14 H N N 127 EB0 H15 H N N 128 EDO C1 C N N 129 EDO O1 O N N 130 EDO C2 C N N 131 EDO O2 O N N 132 EDO H11 H N N 133 EDO H12 H N N 134 EDO HO1 H N N 135 EDO H21 H N N 136 EDO H22 H N N 137 EDO HO2 H N N 138 GLN N N N N 139 GLN CA C N S 140 GLN C C N N 141 GLN O O N N 142 GLN CB C N N 143 GLN CG C N N 144 GLN CD C N N 145 GLN OE1 O N N 146 GLN NE2 N N N 147 GLN OXT O N N 148 GLN H H N N 149 GLN H2 H N N 150 GLN HA H N N 151 GLN HB2 H N N 152 GLN HB3 H N N 153 GLN HG2 H N N 154 GLN HG3 H N N 155 GLN HE21 H N N 156 GLN HE22 H N N 157 GLN HXT H N N 158 GLU N N N N 159 GLU CA C N S 160 GLU C C N N 161 GLU O O N N 162 GLU CB C N N 163 GLU CG C N N 164 GLU CD C N N 165 GLU OE1 O N N 166 GLU OE2 O N N 167 GLU OXT O N N 168 GLU H H N N 169 GLU H2 H N N 170 GLU HA H N N 171 GLU HB2 H N N 172 GLU HB3 H N N 173 GLU HG2 H N N 174 GLU HG3 H N N 175 GLU HE2 H N N 176 GLU HXT H N N 177 GLY N N N N 178 GLY CA C N N 179 GLY C C N N 180 GLY O O N N 181 GLY OXT O N N 182 GLY H H N N 183 GLY H2 H N N 184 GLY HA2 H N N 185 GLY HA3 H N N 186 GLY HXT H N N 187 HIS N N N N 188 HIS CA C N S 189 HIS C C N N 190 HIS O O N N 191 HIS CB C N N 192 HIS CG C Y N 193 HIS ND1 N Y N 194 HIS CD2 C Y N 195 HIS CE1 C Y N 196 HIS NE2 N Y N 197 HIS OXT O N N 198 HIS H H N N 199 HIS H2 H N N 200 HIS HA H N N 201 HIS HB2 H N N 202 HIS HB3 H N N 203 HIS HD1 H N N 204 HIS HD2 H N N 205 HIS HE1 H N N 206 HIS HE2 H N N 207 HIS HXT H N N 208 HOH O O N N 209 HOH H1 H N N 210 HOH H2 H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 NO3 N N N N 301 NO3 O1 O N N 302 NO3 O2 O N N 303 NO3 O3 O N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 VAL N N N N 427 VAL CA C N S 428 VAL C C N N 429 VAL O O N N 430 VAL CB C N N 431 VAL CG1 C N N 432 VAL CG2 C N N 433 VAL OXT O N N 434 VAL H H N N 435 VAL H2 H N N 436 VAL HA H N N 437 VAL HB H N N 438 VAL HG11 H N N 439 VAL HG12 H N N 440 VAL HG13 H N N 441 VAL HG21 H N N 442 VAL HG22 H N N 443 VAL HG23 H N N 444 VAL HXT H N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EB0 FAZ CAW sing N N 83 EB0 CAX CAW doub Y N 84 EB0 CAX CAY sing Y N 85 EB0 CAW CAV sing Y N 86 EB0 CAY CAT doub Y N 87 EB0 CAV CAU doub Y N 88 EB0 CAT NAS sing N N 89 EB0 CAT CAU sing Y N 90 EB0 NAS SAP sing N N 91 EB0 CAH CAG doub Y N 92 EB0 CAH CAI sing Y N 93 EB0 CAG CAD sing Y N 94 EB0 SAP OAR doub N N 95 EB0 SAP OAQ doub N N 96 EB0 SAP CAC sing N N 97 EB0 CAI CAJ doub Y N 98 EB0 CAD CAC doub Y N 99 EB0 CAD CAE sing Y N 100 EB0 CAC CAB sing Y N 101 EB0 CAJ CAE sing Y N 102 EB0 CAJ CAL sing N N 103 EB0 CAE CAF doub Y N 104 EB0 CAB CAA doub Y N 105 EB0 CAL OAM doub N N 106 EB0 CAL NAK sing N N 107 EB0 CAF CAA sing Y N 108 EB0 CAF NAK sing N N 109 EB0 NAK CAN sing N N 110 EB0 CAO CAN sing N N 111 EB0 CAO H1 sing N N 112 EB0 CAO H2 sing N N 113 EB0 CAO H3 sing N N 114 EB0 CAN H4 sing N N 115 EB0 CAN H5 sing N N 116 EB0 CAI H6 sing N N 117 EB0 CAH H7 sing N N 118 EB0 CAG H8 sing N N 119 EB0 CAA H9 sing N N 120 EB0 CAB H10 sing N N 121 EB0 NAS H11 sing N N 122 EB0 CAU H12 sing N N 123 EB0 CAV H13 sing N N 124 EB0 CAX H14 sing N N 125 EB0 CAY H15 sing N N 126 EDO C1 O1 sing N N 127 EDO C1 C2 sing N N 128 EDO C1 H11 sing N N 129 EDO C1 H12 sing N N 130 EDO O1 HO1 sing N N 131 EDO C2 O2 sing N N 132 EDO C2 H21 sing N N 133 EDO C2 H22 sing N N 134 EDO O2 HO2 sing N N 135 GLN N CA sing N N 136 GLN N H sing N N 137 GLN N H2 sing N N 138 GLN CA C sing N N 139 GLN CA CB sing N N 140 GLN CA HA sing N N 141 GLN C O doub N N 142 GLN C OXT sing N N 143 GLN CB CG sing N N 144 GLN CB HB2 sing N N 145 GLN CB HB3 sing N N 146 GLN CG CD sing N N 147 GLN CG HG2 sing N N 148 GLN CG HG3 sing N N 149 GLN CD OE1 doub N N 150 GLN CD NE2 sing N N 151 GLN NE2 HE21 sing N N 152 GLN NE2 HE22 sing N N 153 GLN OXT HXT sing N N 154 GLU N CA sing N N 155 GLU N H sing N N 156 GLU N H2 sing N N 157 GLU CA C sing N N 158 GLU CA CB sing N N 159 GLU CA HA sing N N 160 GLU C O doub N N 161 GLU C OXT sing N N 162 GLU CB CG sing N N 163 GLU CB HB2 sing N N 164 GLU CB HB3 sing N N 165 GLU CG CD sing N N 166 GLU CG HG2 sing N N 167 GLU CG HG3 sing N N 168 GLU CD OE1 doub N N 169 GLU CD OE2 sing N N 170 GLU OE2 HE2 sing N N 171 GLU OXT HXT sing N N 172 GLY N CA sing N N 173 GLY N H sing N N 174 GLY N H2 sing N N 175 GLY CA C sing N N 176 GLY CA HA2 sing N N 177 GLY CA HA3 sing N N 178 GLY C O doub N N 179 GLY C OXT sing N N 180 GLY OXT HXT sing N N 181 HIS N CA sing N N 182 HIS N H sing N N 183 HIS N H2 sing N N 184 HIS CA C sing N N 185 HIS CA CB sing N N 186 HIS CA HA sing N N 187 HIS C O doub N N 188 HIS C OXT sing N N 189 HIS CB CG sing N N 190 HIS CB HB2 sing N N 191 HIS CB HB3 sing N N 192 HIS CG ND1 sing Y N 193 HIS CG CD2 doub Y N 194 HIS ND1 CE1 doub Y N 195 HIS ND1 HD1 sing N N 196 HIS CD2 NE2 sing Y N 197 HIS CD2 HD2 sing N N 198 HIS CE1 NE2 sing Y N 199 HIS CE1 HE1 sing N N 200 HIS NE2 HE2 sing N N 201 HIS OXT HXT sing N N 202 HOH O H1 sing N N 203 HOH O H2 sing N N 204 ILE N CA sing N N 205 ILE N H sing N N 206 ILE N H2 sing N N 207 ILE CA C sing N N 208 ILE CA CB sing N N 209 ILE CA HA sing N N 210 ILE C O doub N N 211 ILE C OXT sing N N 212 ILE CB CG1 sing N N 213 ILE CB CG2 sing N N 214 ILE CB HB sing N N 215 ILE CG1 CD1 sing N N 216 ILE CG1 HG12 sing N N 217 ILE CG1 HG13 sing N N 218 ILE CG2 HG21 sing N N 219 ILE CG2 HG22 sing N N 220 ILE CG2 HG23 sing N N 221 ILE CD1 HD11 sing N N 222 ILE CD1 HD12 sing N N 223 ILE CD1 HD13 sing N N 224 ILE OXT HXT sing N N 225 LEU N CA sing N N 226 LEU N H sing N N 227 LEU N H2 sing N N 228 LEU CA C sing N N 229 LEU CA CB sing N N 230 LEU CA HA sing N N 231 LEU C O doub N N 232 LEU C OXT sing N N 233 LEU CB CG sing N N 234 LEU CB HB2 sing N N 235 LEU CB HB3 sing N N 236 LEU CG CD1 sing N N 237 LEU CG CD2 sing N N 238 LEU CG HG sing N N 239 LEU CD1 HD11 sing N N 240 LEU CD1 HD12 sing N N 241 LEU CD1 HD13 sing N N 242 LEU CD2 HD21 sing N N 243 LEU CD2 HD22 sing N N 244 LEU CD2 HD23 sing N N 245 LEU OXT HXT sing N N 246 LYS N CA sing N N 247 LYS N H sing N N 248 LYS N H2 sing N N 249 LYS CA C sing N N 250 LYS CA CB sing N N 251 LYS CA HA sing N N 252 LYS C O doub N N 253 LYS C OXT sing N N 254 LYS CB CG sing N N 255 LYS CB HB2 sing N N 256 LYS CB HB3 sing N N 257 LYS CG CD sing N N 258 LYS CG HG2 sing N N 259 LYS CG HG3 sing N N 260 LYS CD CE sing N N 261 LYS CD HD2 sing N N 262 LYS CD HD3 sing N N 263 LYS CE NZ sing N N 264 LYS CE HE2 sing N N 265 LYS CE HE3 sing N N 266 LYS NZ HZ1 sing N N 267 LYS NZ HZ2 sing N N 268 LYS NZ HZ3 sing N N 269 LYS OXT HXT sing N N 270 MET N CA sing N N 271 MET N H sing N N 272 MET N H2 sing N N 273 MET CA C sing N N 274 MET CA CB sing N N 275 MET CA HA sing N N 276 MET C O doub N N 277 MET C OXT sing N N 278 MET CB CG sing N N 279 MET CB HB2 sing N N 280 MET CB HB3 sing N N 281 MET CG SD sing N N 282 MET CG HG2 sing N N 283 MET CG HG3 sing N N 284 MET SD CE sing N N 285 MET CE HE1 sing N N 286 MET CE HE2 sing N N 287 MET CE HE3 sing N N 288 MET OXT HXT sing N N 289 NO3 N O1 doub N N 290 NO3 N O2 sing N N 291 NO3 N O3 sing N N 292 PHE N CA sing N N 293 PHE N H sing N N 294 PHE N H2 sing N N 295 PHE CA C sing N N 296 PHE CA CB sing N N 297 PHE CA HA sing N N 298 PHE C O doub N N 299 PHE C OXT sing N N 300 PHE CB CG sing N N 301 PHE CB HB2 sing N N 302 PHE CB HB3 sing N N 303 PHE CG CD1 doub Y N 304 PHE CG CD2 sing Y N 305 PHE CD1 CE1 sing Y N 306 PHE CD1 HD1 sing N N 307 PHE CD2 CE2 doub Y N 308 PHE CD2 HD2 sing N N 309 PHE CE1 CZ doub Y N 310 PHE CE1 HE1 sing N N 311 PHE CE2 CZ sing Y N 312 PHE CE2 HE2 sing N N 313 PHE CZ HZ sing N N 314 PHE OXT HXT sing N N 315 PRO N CA sing N N 316 PRO N CD sing N N 317 PRO N H sing N N 318 PRO CA C sing N N 319 PRO CA CB sing N N 320 PRO CA HA sing N N 321 PRO C O doub N N 322 PRO C OXT sing N N 323 PRO CB CG sing N N 324 PRO CB HB2 sing N N 325 PRO CB HB3 sing N N 326 PRO CG CD sing N N 327 PRO CG HG2 sing N N 328 PRO CG HG3 sing N N 329 PRO CD HD2 sing N N 330 PRO CD HD3 sing N N 331 PRO OXT HXT sing N N 332 SER N CA sing N N 333 SER N H sing N N 334 SER N H2 sing N N 335 SER CA C sing N N 336 SER CA CB sing N N 337 SER CA HA sing N N 338 SER C O doub N N 339 SER C OXT sing N N 340 SER CB OG sing N N 341 SER CB HB2 sing N N 342 SER CB HB3 sing N N 343 SER OG HG sing N N 344 SER OXT HXT sing N N 345 THR N CA sing N N 346 THR N H sing N N 347 THR N H2 sing N N 348 THR CA C sing N N 349 THR CA CB sing N N 350 THR CA HA sing N N 351 THR C O doub N N 352 THR C OXT sing N N 353 THR CB OG1 sing N N 354 THR CB CG2 sing N N 355 THR CB HB sing N N 356 THR OG1 HG1 sing N N 357 THR CG2 HG21 sing N N 358 THR CG2 HG22 sing N N 359 THR CG2 HG23 sing N N 360 THR OXT HXT sing N N 361 TRP N CA sing N N 362 TRP N H sing N N 363 TRP N H2 sing N N 364 TRP CA C sing N N 365 TRP CA CB sing N N 366 TRP CA HA sing N N 367 TRP C O doub N N 368 TRP C OXT sing N N 369 TRP CB CG sing N N 370 TRP CB HB2 sing N N 371 TRP CB HB3 sing N N 372 TRP CG CD1 doub Y N 373 TRP CG CD2 sing Y N 374 TRP CD1 NE1 sing Y N 375 TRP CD1 HD1 sing N N 376 TRP CD2 CE2 doub Y N 377 TRP CD2 CE3 sing Y N 378 TRP NE1 CE2 sing Y N 379 TRP NE1 HE1 sing N N 380 TRP CE2 CZ2 sing Y N 381 TRP CE3 CZ3 doub Y N 382 TRP CE3 HE3 sing N N 383 TRP CZ2 CH2 doub Y N 384 TRP CZ2 HZ2 sing N N 385 TRP CZ3 CH2 sing Y N 386 TRP CZ3 HZ3 sing N N 387 TRP CH2 HH2 sing N N 388 TRP OXT HXT sing N N 389 TYR N CA sing N N 390 TYR N H sing N N 391 TYR N H2 sing N N 392 TYR CA C sing N N 393 TYR CA CB sing N N 394 TYR CA HA sing N N 395 TYR C O doub N N 396 TYR C OXT sing N N 397 TYR CB CG sing N N 398 TYR CB HB2 sing N N 399 TYR CB HB3 sing N N 400 TYR CG CD1 doub Y N 401 TYR CG CD2 sing Y N 402 TYR CD1 CE1 sing Y N 403 TYR CD1 HD1 sing N N 404 TYR CD2 CE2 doub Y N 405 TYR CD2 HD2 sing N N 406 TYR CE1 CZ doub Y N 407 TYR CE1 HE1 sing N N 408 TYR CE2 CZ sing Y N 409 TYR CE2 HE2 sing N N 410 TYR CZ OH sing N N 411 TYR OH HH sing N N 412 TYR OXT HXT sing N N 413 VAL N CA sing N N 414 VAL N H sing N N 415 VAL N H2 sing N N 416 VAL CA C sing N N 417 VAL CA CB sing N N 418 VAL CA HA sing N N 419 VAL C O doub N N 420 VAL C OXT sing N N 421 VAL CB CG1 sing N N 422 VAL CB CG2 sing N N 423 VAL CB HB sing N N 424 VAL CG1 HG11 sing N N 425 VAL CG1 HG12 sing N N 426 VAL CG1 HG13 sing N N 427 VAL CG2 HG21 sing N N 428 VAL CG2 HG22 sing N N 429 VAL CG2 HG23 sing N N 430 VAL OXT HXT sing N N 431 # _atom_sites.entry_id 5CP5 _atom_sites.fract_transf_matrix[1][1] 0.028035 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021124 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012890 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C F N O S # loop_