data_5CQ5 # _entry.id 5CQ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5CQ5 WWPDB D_1000212022 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CQ5 _pdbx_database_status.recvd_initial_deposition_date 2015-07-21 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bradley, A.' 1 'Pearce, N.' 2 'Krojer, T.' 3 'Ng, J.' 4 'Talon, R.' 5 'Vollmar, M.' 6 'Jose, B.' 7 'von Delft, F.' 8 'Bountra, C.' 9 'Arrowsmith, C.H.' 10 'Edwards, A.' 11 'Knapp, S.' 12 'Structural Genomics Consortium (SGC)' 13 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 2,3-Ethylenedioxybenzoic Acid (SGC - Diamond I04-1 fragment screening) ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bradley, A.' 1 primary 'Pearce, N.' 2 primary 'Krojer, T.' 3 primary 'Ng, J.' 4 primary 'Talon, R.' 5 primary 'Vollmar, M.' 6 primary 'Jose, B.' 7 primary 'von Delft, F.' 8 primary 'Bountra, C.' 9 primary 'Arrowsmith, C.H.' 10 primary 'Edwards, A.' 11 primary 'Knapp, S.' 12 primary 'Structural Genomics Consortium (SGC)' 13 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5CQ5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 82.254 _cell.length_a_esd ? _cell.length_b 96.600 _cell.length_b_esd ? _cell.length_c 58.007 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain adjacent to zinc finger domain protein 2B' 14057.129 1 ? ? Bromodomain ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 non-polymer syn '2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' 180.157 2 ? ? ? ? 4 water nat water 18.015 177 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name hWALp4 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;YFQSMSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALD VRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKVS ; _entity_poly.pdbx_seq_one_letter_code_can ;YFQSMSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALD VRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKVS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 PHE n 1 3 GLN n 1 4 SER n 1 5 MET n 1 6 SER n 1 7 VAL n 1 8 LYS n 1 9 LYS n 1 10 PRO n 1 11 LYS n 1 12 ARG n 1 13 ASP n 1 14 ASP n 1 15 SER n 1 16 LYS n 1 17 ASP n 1 18 LEU n 1 19 ALA n 1 20 LEU n 1 21 CYS n 1 22 SER n 1 23 MET n 1 24 ILE n 1 25 LEU n 1 26 THR n 1 27 GLU n 1 28 MET n 1 29 GLU n 1 30 THR n 1 31 HIS n 1 32 GLU n 1 33 ASP n 1 34 ALA n 1 35 TRP n 1 36 PRO n 1 37 PHE n 1 38 LEU n 1 39 LEU n 1 40 PRO n 1 41 VAL n 1 42 ASN n 1 43 LEU n 1 44 LYS n 1 45 LEU n 1 46 VAL n 1 47 PRO n 1 48 GLY n 1 49 TYR n 1 50 LYS n 1 51 LYS n 1 52 VAL n 1 53 ILE n 1 54 LYS n 1 55 LYS n 1 56 PRO n 1 57 MET n 1 58 ASP n 1 59 PHE n 1 60 SER n 1 61 THR n 1 62 ILE n 1 63 ARG n 1 64 GLU n 1 65 LYS n 1 66 LEU n 1 67 SER n 1 68 SER n 1 69 GLY n 1 70 GLN n 1 71 TYR n 1 72 PRO n 1 73 ASN n 1 74 LEU n 1 75 GLU n 1 76 THR n 1 77 PHE n 1 78 ALA n 1 79 LEU n 1 80 ASP n 1 81 VAL n 1 82 ARG n 1 83 LEU n 1 84 VAL n 1 85 PHE n 1 86 ASP n 1 87 ASN n 1 88 CYS n 1 89 GLU n 1 90 THR n 1 91 PHE n 1 92 ASN n 1 93 GLU n 1 94 ASP n 1 95 ASP n 1 96 SER n 1 97 ASP n 1 98 ILE n 1 99 GLY n 1 100 ARG n 1 101 ALA n 1 102 GLY n 1 103 HIS n 1 104 ASN n 1 105 MET n 1 106 ARG n 1 107 LYS n 1 108 TYR n 1 109 PHE n 1 110 GLU n 1 111 LYS n 1 112 LYS n 1 113 TRP n 1 114 THR n 1 115 ASP n 1 116 THR n 1 117 PHE n 1 118 LYS n 1 119 VAL n 1 120 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 120 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BAZ2B, KIAA1476' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BAZ2B_HUMAN _struct_ref.pdbx_db_accession Q9UIF8 _struct_ref.pdbx_db_isoform Q9UIF8-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVF DNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKVS ; _struct_ref.pdbx_align_begin 1954 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5CQ5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UIF8 _struct_ref_seq.db_align_beg 1954 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2068 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1858 _struct_ref_seq.pdbx_auth_seq_align_end 1972 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CQ5 TYR A 1 ? UNP Q9UIF8 ? ? 'expression tag' 1853 1 1 5CQ5 PHE A 2 ? UNP Q9UIF8 ? ? 'expression tag' 1854 2 1 5CQ5 GLN A 3 ? UNP Q9UIF8 ? ? 'expression tag' 1855 3 1 5CQ5 SER A 4 ? UNP Q9UIF8 ? ? 'expression tag' 1856 4 1 5CQ5 MET A 5 ? UNP Q9UIF8 ? ? 'expression tag' 1857 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 53E non-polymer . '2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' ? 'C9 H8 O4' 180.157 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CQ5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% PEG600 , 0.1M MES pH 6.3' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-06-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9200 1.0 2 0.987 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CQ5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.960 _reflns.d_resolution_low 29.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16625 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.100 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.800 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 1 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.029 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 84050 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.960 2.010 ? 1.300 2505 ? ? 1056 ? 85.200 ? ? ? ? 0.666 ? ? ? ? ? ? ? ? 2.400 ? ? ? ? ? 0.469 0 1 1 0.541 ? 8.770 29.000 ? 90.500 1366 ? ? 221 ? 97.600 ? ? ? ? 0.016 ? ? ? ? ? ? ? ? 6.200 ? ? ? ? ? 0.007 0 2 1 1.000 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 75.830 _refine.B_iso_mean 33.1714 _refine.B_iso_min 17.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5CQ5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.9610 _refine.ls_d_res_low 19.6420 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16598 _refine.ls_number_reflns_R_free 755 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.0300 _refine.ls_percent_reflns_R_free 4.5500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1875 _refine.ls_R_factor_R_free 0.2180 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1860 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.910 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.0700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.9610 _refine_hist.d_res_low 19.6420 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 177 _refine_hist.number_atoms_total 1136 _refine_hist.pdbx_number_residues_total 114 _refine_hist.pdbx_B_iso_mean_ligand 45.81 _refine_hist.pdbx_B_iso_mean_solvent 40.86 _refine_hist.pdbx_number_atoms_protein 925 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # _struct.entry_id 5CQ5 _struct.title ;Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 2,3-Ethylenedioxybenzoic Acid (SGC - Diamond I04-1 fragment screening) ; _struct.pdbx_descriptor 'Bromodomain adjacent to zinc finger domain protein 2B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CQ5 _struct_keywords.text 'Structural Genomics, Structural Genomics Consortium, SGC, transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 16 ? HIS A 31 ? LYS A 1868 HIS A 1883 1 ? 16 HELX_P HELX_P2 AA2 ALA A 34 ? LEU A 38 ? ALA A 1886 LEU A 1890 5 ? 5 HELX_P HELX_P3 AA3 GLY A 48 ? ILE A 53 ? GLY A 1900 ILE A 1905 1 ? 6 HELX_P HELX_P4 AA4 ASP A 58 ? SER A 68 ? ASP A 1910 SER A 1920 1 ? 11 HELX_P HELX_P5 AA5 ASN A 73 ? ASN A 92 ? ASN A 1925 ASN A 1944 1 ? 20 HELX_P HELX_P6 AA6 SER A 96 ? PHE A 117 ? SER A 1948 PHE A 1969 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 2001 ? 5 'binding site for residue EDO A 2001' AC2 Software A EDO 2002 ? 3 'binding site for residue EDO A 2002' AC3 Software A 53E 2003 ? 6 'binding site for residue 53E A 2003' AC4 Software A 53E 2004 ? 5 'binding site for residue 53E A 2004' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 MET A 23 ? MET A 1875 . ? 1_555 ? 2 AC1 5 GLU A 27 ? GLU A 1879 . ? 1_555 ? 3 AC1 5 LYS A 112 ? LYS A 1964 . ? 1_555 ? 4 AC1 5 THR A 116 ? THR A 1968 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 2103 . ? 1_555 ? 6 AC2 3 ASN A 92 ? ASN A 1944 . ? 1_555 ? 7 AC2 3 HOH F . ? HOH A 2102 . ? 1_555 ? 8 AC2 3 HOH F . ? HOH A 2140 . ? 1_555 ? 9 AC3 6 LYS A 50 ? LYS A 1902 . ? 4_566 ? 10 AC3 6 LYS A 51 ? LYS A 1903 . ? 4_566 ? 11 AC3 6 LYS A 54 ? LYS A 1906 . ? 4_566 ? 12 AC3 6 GLU A 93 ? GLU A 1945 . ? 1_555 ? 13 AC3 6 ASP A 94 ? ASP A 1946 . ? 1_555 ? 14 AC3 6 HOH F . ? HOH A 2168 . ? 1_555 ? 15 AC4 5 LEU A 74 ? LEU A 1926 . ? 1_555 ? 16 AC4 5 GLU A 75 ? GLU A 1927 . ? 1_555 ? 17 AC4 5 ARG A 82 ? ARG A 1934 . ? 1_555 ? 18 AC4 5 TRP A 113 ? TRP A 1965 . ? 1_555 ? 19 AC4 5 PHE A 117 ? PHE A 1969 . ? 1_555 ? # _atom_sites.entry_id 5CQ5 _atom_sites.fract_transf_matrix[1][1] 0.012157 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010352 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017239 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1853 ? ? ? A . n A 1 2 PHE 2 1854 ? ? ? A . n A 1 3 GLN 3 1855 ? ? ? A . n A 1 4 SER 4 1856 1856 SER SER A . n A 1 5 MET 5 1857 1857 MET MET A . n A 1 6 SER 6 1858 1858 SER SER A . n A 1 7 VAL 7 1859 1859 VAL VAL A . n A 1 8 LYS 8 1860 1860 LYS LYS A . n A 1 9 LYS 9 1861 1861 LYS LYS A . n A 1 10 PRO 10 1862 1862 PRO PRO A . n A 1 11 LYS 11 1863 1863 LYS LYS A . n A 1 12 ARG 12 1864 1864 ARG ARG A . n A 1 13 ASP 13 1865 1865 ASP ASP A . n A 1 14 ASP 14 1866 1866 ASP ASP A . n A 1 15 SER 15 1867 1867 SER SER A . n A 1 16 LYS 16 1868 1868 LYS LYS A . n A 1 17 ASP 17 1869 1869 ASP ASP A . n A 1 18 LEU 18 1870 1870 LEU LEU A . n A 1 19 ALA 19 1871 1871 ALA ALA A . n A 1 20 LEU 20 1872 1872 LEU LEU A . n A 1 21 CYS 21 1873 1873 CYS CYS A . n A 1 22 SER 22 1874 1874 SER SER A . n A 1 23 MET 23 1875 1875 MET MET A . n A 1 24 ILE 24 1876 1876 ILE ILE A . n A 1 25 LEU 25 1877 1877 LEU LEU A . n A 1 26 THR 26 1878 1878 THR THR A . n A 1 27 GLU 27 1879 1879 GLU GLU A . n A 1 28 MET 28 1880 1880 MET MET A . n A 1 29 GLU 29 1881 1881 GLU GLU A . n A 1 30 THR 30 1882 1882 THR THR A . n A 1 31 HIS 31 1883 1883 HIS HIS A . n A 1 32 GLU 32 1884 1884 GLU GLU A . n A 1 33 ASP 33 1885 1885 ASP ASP A . n A 1 34 ALA 34 1886 1886 ALA ALA A . n A 1 35 TRP 35 1887 1887 TRP TRP A . n A 1 36 PRO 36 1888 1888 PRO PRO A . n A 1 37 PHE 37 1889 1889 PHE PHE A . n A 1 38 LEU 38 1890 1890 LEU LEU A . n A 1 39 LEU 39 1891 1891 LEU LEU A . n A 1 40 PRO 40 1892 1892 PRO PRO A . n A 1 41 VAL 41 1893 1893 VAL VAL A . n A 1 42 ASN 42 1894 1894 ASN ASN A . n A 1 43 LEU 43 1895 1895 LEU LEU A . n A 1 44 LYS 44 1896 1896 LYS LYS A . n A 1 45 LEU 45 1897 1897 LEU LEU A . n A 1 46 VAL 46 1898 1898 VAL VAL A . n A 1 47 PRO 47 1899 1899 PRO PRO A . n A 1 48 GLY 48 1900 1900 GLY GLY A . n A 1 49 TYR 49 1901 1901 TYR TYR A . n A 1 50 LYS 50 1902 1902 LYS LYS A . n A 1 51 LYS 51 1903 1903 LYS LYS A . n A 1 52 VAL 52 1904 1904 VAL VAL A . n A 1 53 ILE 53 1905 1905 ILE ILE A . n A 1 54 LYS 54 1906 1906 LYS LYS A . n A 1 55 LYS 55 1907 1907 LYS LYS A . n A 1 56 PRO 56 1908 1908 PRO PRO A . n A 1 57 MET 57 1909 1909 MET MET A . n A 1 58 ASP 58 1910 1910 ASP ASP A . n A 1 59 PHE 59 1911 1911 PHE PHE A . n A 1 60 SER 60 1912 1912 SER SER A . n A 1 61 THR 61 1913 1913 THR THR A . n A 1 62 ILE 62 1914 1914 ILE ILE A . n A 1 63 ARG 63 1915 1915 ARG ARG A . n A 1 64 GLU 64 1916 1916 GLU GLU A . n A 1 65 LYS 65 1917 1917 LYS LYS A . n A 1 66 LEU 66 1918 1918 LEU LEU A . n A 1 67 SER 67 1919 1919 SER SER A . n A 1 68 SER 68 1920 1920 SER SER A . n A 1 69 GLY 69 1921 1921 GLY GLY A . n A 1 70 GLN 70 1922 1922 GLN GLN A . n A 1 71 TYR 71 1923 1923 TYR TYR A . n A 1 72 PRO 72 1924 1924 PRO PRO A . n A 1 73 ASN 73 1925 1925 ASN ASN A . n A 1 74 LEU 74 1926 1926 LEU LEU A . n A 1 75 GLU 75 1927 1927 GLU GLU A . n A 1 76 THR 76 1928 1928 THR THR A . n A 1 77 PHE 77 1929 1929 PHE PHE A . n A 1 78 ALA 78 1930 1930 ALA ALA A . n A 1 79 LEU 79 1931 1931 LEU LEU A . n A 1 80 ASP 80 1932 1932 ASP ASP A . n A 1 81 VAL 81 1933 1933 VAL VAL A . n A 1 82 ARG 82 1934 1934 ARG ARG A . n A 1 83 LEU 83 1935 1935 LEU LEU A . n A 1 84 VAL 84 1936 1936 VAL VAL A . n A 1 85 PHE 85 1937 1937 PHE PHE A . n A 1 86 ASP 86 1938 1938 ASP ASP A . n A 1 87 ASN 87 1939 1939 ASN ASN A . n A 1 88 CYS 88 1940 1940 CYS CYS A . n A 1 89 GLU 89 1941 1941 GLU GLU A . n A 1 90 THR 90 1942 1942 THR THR A . n A 1 91 PHE 91 1943 1943 PHE PHE A . n A 1 92 ASN 92 1944 1944 ASN ASN A . n A 1 93 GLU 93 1945 1945 GLU GLU A . n A 1 94 ASP 94 1946 1946 ASP ASP A . n A 1 95 ASP 95 1947 1947 ASP ASP A . n A 1 96 SER 96 1948 1948 SER SER A . n A 1 97 ASP 97 1949 1949 ASP ASP A . n A 1 98 ILE 98 1950 1950 ILE ILE A . n A 1 99 GLY 99 1951 1951 GLY GLY A . n A 1 100 ARG 100 1952 1952 ARG ARG A . n A 1 101 ALA 101 1953 1953 ALA ALA A . n A 1 102 GLY 102 1954 1954 GLY GLY A . n A 1 103 HIS 103 1955 1955 HIS HIS A . n A 1 104 ASN 104 1956 1956 ASN ASN A . n A 1 105 MET 105 1957 1957 MET MET A . n A 1 106 ARG 106 1958 1958 ARG ARG A . n A 1 107 LYS 107 1959 1959 LYS LYS A . n A 1 108 TYR 108 1960 1960 TYR TYR A . n A 1 109 PHE 109 1961 1961 PHE PHE A . n A 1 110 GLU 110 1962 1962 GLU GLU A . n A 1 111 LYS 111 1963 1963 LYS LYS A . n A 1 112 LYS 112 1964 1964 LYS LYS A . n A 1 113 TRP 113 1965 1965 TRP TRP A . n A 1 114 THR 114 1966 1966 THR THR A . n A 1 115 ASP 115 1967 1967 ASP ASP A . n A 1 116 THR 116 1968 1968 THR THR A . n A 1 117 PHE 117 1969 1969 PHE PHE A . n A 1 118 LYS 118 1970 ? ? ? A . n A 1 119 VAL 119 1971 ? ? ? A . n A 1 120 SER 120 1972 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 2001 1 EDO EDO A . C 2 EDO 1 2002 2 EDO EDO A . D 3 53E 1 2003 1 53E LIG A . E 3 53E 1 2004 2 53E LIG A . F 4 HOH 1 2101 37 HOH HOH A . F 4 HOH 2 2102 140 HOH HOH A . F 4 HOH 3 2103 99 HOH HOH A . F 4 HOH 4 2104 38 HOH HOH A . F 4 HOH 5 2105 155 HOH HOH A . F 4 HOH 6 2106 125 HOH HOH A . F 4 HOH 7 2107 98 HOH HOH A . F 4 HOH 8 2108 173 HOH HOH A . F 4 HOH 9 2109 6 HOH HOH A . F 4 HOH 10 2110 120 HOH HOH A . F 4 HOH 11 2111 7 HOH HOH A . F 4 HOH 12 2112 69 HOH HOH A . F 4 HOH 13 2113 77 HOH HOH A . F 4 HOH 14 2114 138 HOH HOH A . F 4 HOH 15 2115 63 HOH HOH A . F 4 HOH 16 2116 73 HOH HOH A . F 4 HOH 17 2117 41 HOH HOH A . F 4 HOH 18 2118 46 HOH HOH A . F 4 HOH 19 2119 87 HOH HOH A . F 4 HOH 20 2120 49 HOH HOH A . F 4 HOH 21 2121 102 HOH HOH A . F 4 HOH 22 2122 2 HOH HOH A . F 4 HOH 23 2123 60 HOH HOH A . F 4 HOH 24 2124 9 HOH HOH A . F 4 HOH 25 2125 48 HOH HOH A . F 4 HOH 26 2126 62 HOH HOH A . F 4 HOH 27 2127 71 HOH HOH A . F 4 HOH 28 2128 14 HOH HOH A . F 4 HOH 29 2129 97 HOH HOH A . F 4 HOH 30 2130 40 HOH HOH A . F 4 HOH 31 2131 24 HOH HOH A . F 4 HOH 32 2132 35 HOH HOH A . F 4 HOH 33 2133 53 HOH HOH A . F 4 HOH 34 2134 27 HOH HOH A . F 4 HOH 35 2135 33 HOH HOH A . F 4 HOH 36 2136 74 HOH HOH A . F 4 HOH 37 2137 47 HOH HOH A . F 4 HOH 38 2138 79 HOH HOH A . F 4 HOH 39 2139 5 HOH HOH A . F 4 HOH 40 2140 39 HOH HOH A . F 4 HOH 41 2141 10 HOH HOH A . F 4 HOH 42 2142 26 HOH HOH A . F 4 HOH 43 2143 15 HOH HOH A . F 4 HOH 44 2144 22 HOH HOH A . F 4 HOH 45 2145 31 HOH HOH A . F 4 HOH 46 2146 92 HOH HOH A . F 4 HOH 47 2147 42 HOH HOH A . F 4 HOH 48 2148 51 HOH HOH A . F 4 HOH 49 2149 96 HOH HOH A . F 4 HOH 50 2150 17 HOH HOH A . F 4 HOH 51 2151 161 HOH HOH A . F 4 HOH 52 2152 16 HOH HOH A . F 4 HOH 53 2153 66 HOH HOH A . F 4 HOH 54 2154 95 HOH HOH A . F 4 HOH 55 2155 75 HOH HOH A . F 4 HOH 56 2156 21 HOH HOH A . F 4 HOH 57 2157 83 HOH HOH A . F 4 HOH 58 2158 89 HOH HOH A . F 4 HOH 59 2159 20 HOH HOH A . F 4 HOH 60 2160 115 HOH HOH A . F 4 HOH 61 2161 18 HOH HOH A . F 4 HOH 62 2162 1 HOH HOH A . F 4 HOH 63 2163 76 HOH HOH A . F 4 HOH 64 2164 36 HOH HOH A . F 4 HOH 65 2165 19 HOH HOH A . F 4 HOH 66 2166 52 HOH HOH A . F 4 HOH 67 2167 28 HOH HOH A . F 4 HOH 68 2168 126 HOH HOH A . F 4 HOH 69 2169 94 HOH HOH A . F 4 HOH 70 2170 4 HOH HOH A . F 4 HOH 71 2171 142 HOH HOH A . F 4 HOH 72 2172 57 HOH HOH A . F 4 HOH 73 2173 130 HOH HOH A . F 4 HOH 74 2174 116 HOH HOH A . F 4 HOH 75 2175 12 HOH HOH A . F 4 HOH 76 2176 101 HOH HOH A . F 4 HOH 77 2177 135 HOH HOH A . F 4 HOH 78 2178 78 HOH HOH A . F 4 HOH 79 2179 104 HOH HOH A . F 4 HOH 80 2180 54 HOH HOH A . F 4 HOH 81 2181 25 HOH HOH A . F 4 HOH 82 2182 29 HOH HOH A . F 4 HOH 83 2183 170 HOH HOH A . F 4 HOH 84 2184 8 HOH HOH A . F 4 HOH 85 2185 166 HOH HOH A . F 4 HOH 86 2186 81 HOH HOH A . F 4 HOH 87 2187 113 HOH HOH A . F 4 HOH 88 2188 58 HOH HOH A . F 4 HOH 89 2189 64 HOH HOH A . F 4 HOH 90 2190 13 HOH HOH A . F 4 HOH 91 2191 91 HOH HOH A . F 4 HOH 92 2192 34 HOH HOH A . F 4 HOH 93 2193 84 HOH HOH A . F 4 HOH 94 2194 30 HOH HOH A . F 4 HOH 95 2195 65 HOH HOH A . F 4 HOH 96 2196 3 HOH HOH A . F 4 HOH 97 2197 106 HOH HOH A . F 4 HOH 98 2198 159 HOH HOH A . F 4 HOH 99 2199 153 HOH HOH A . F 4 HOH 100 2200 11 HOH HOH A . F 4 HOH 101 2201 55 HOH HOH A . F 4 HOH 102 2202 175 HOH HOH A . F 4 HOH 103 2203 82 HOH HOH A . F 4 HOH 104 2204 174 HOH HOH A . F 4 HOH 105 2205 86 HOH HOH A . F 4 HOH 106 2206 23 HOH HOH A . F 4 HOH 107 2207 114 HOH HOH A . F 4 HOH 108 2208 122 HOH HOH A . F 4 HOH 109 2209 172 HOH HOH A . F 4 HOH 110 2210 144 HOH HOH A . F 4 HOH 111 2211 105 HOH HOH A . F 4 HOH 112 2212 100 HOH HOH A . F 4 HOH 113 2213 141 HOH HOH A . F 4 HOH 114 2214 156 HOH HOH A . F 4 HOH 115 2215 111 HOH HOH A . F 4 HOH 116 2216 70 HOH HOH A . F 4 HOH 117 2217 123 HOH HOH A . F 4 HOH 118 2218 110 HOH HOH A . F 4 HOH 119 2219 137 HOH HOH A . F 4 HOH 120 2220 178 HOH HOH A . F 4 HOH 121 2221 139 HOH HOH A . F 4 HOH 122 2222 151 HOH HOH A . F 4 HOH 123 2223 103 HOH HOH A . F 4 HOH 124 2224 165 HOH HOH A . F 4 HOH 125 2225 143 HOH HOH A . F 4 HOH 126 2226 118 HOH HOH A . F 4 HOH 127 2227 61 HOH HOH A . F 4 HOH 128 2228 164 HOH HOH A . F 4 HOH 129 2229 109 HOH HOH A . F 4 HOH 130 2230 147 HOH HOH A . F 4 HOH 131 2231 134 HOH HOH A . F 4 HOH 132 2232 32 HOH HOH A . F 4 HOH 133 2233 85 HOH HOH A . F 4 HOH 134 2234 50 HOH HOH A . F 4 HOH 135 2235 45 HOH HOH A . F 4 HOH 136 2236 149 HOH HOH A . F 4 HOH 137 2237 117 HOH HOH A . F 4 HOH 138 2238 169 HOH HOH A . F 4 HOH 139 2239 59 HOH HOH A . F 4 HOH 140 2240 88 HOH HOH A . F 4 HOH 141 2241 157 HOH HOH A . F 4 HOH 142 2242 67 HOH HOH A . F 4 HOH 143 2243 158 HOH HOH A . F 4 HOH 144 2244 124 HOH HOH A . F 4 HOH 145 2245 72 HOH HOH A . F 4 HOH 146 2246 145 HOH HOH A . F 4 HOH 147 2247 133 HOH HOH A . F 4 HOH 148 2248 146 HOH HOH A . F 4 HOH 149 2249 148 HOH HOH A . F 4 HOH 150 2250 176 HOH HOH A . F 4 HOH 151 2251 162 HOH HOH A . F 4 HOH 152 2252 136 HOH HOH A . F 4 HOH 153 2253 154 HOH HOH A . F 4 HOH 154 2254 112 HOH HOH A . F 4 HOH 155 2255 132 HOH HOH A . F 4 HOH 156 2256 108 HOH HOH A . F 4 HOH 157 2257 90 HOH HOH A . F 4 HOH 158 2258 127 HOH HOH A . F 4 HOH 159 2259 80 HOH HOH A . F 4 HOH 160 2260 93 HOH HOH A . F 4 HOH 161 2261 152 HOH HOH A . F 4 HOH 162 2262 56 HOH HOH A . F 4 HOH 163 2263 131 HOH HOH A . F 4 HOH 164 2264 107 HOH HOH A . F 4 HOH 165 2265 43 HOH HOH A . F 4 HOH 166 2266 163 HOH HOH A . F 4 HOH 167 2267 177 HOH HOH A . F 4 HOH 168 2268 150 HOH HOH A . F 4 HOH 169 2269 171 HOH HOH A . F 4 HOH 170 2270 167 HOH HOH A . F 4 HOH 171 2271 68 HOH HOH A . F 4 HOH 172 2272 121 HOH HOH A . F 4 HOH 173 2273 128 HOH HOH A . F 4 HOH 174 2274 119 HOH HOH A . F 4 HOH 175 2275 160 HOH HOH A . F 4 HOH 176 2276 168 HOH HOH A . F 4 HOH 177 2277 129 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 450 ? 1 MORE 5 ? 1 'SSA (A^2)' 7860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-09-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.1.29 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2222 ? ? O A HOH 2236 ? ? 2.14 2 1 O A HOH 2188 ? ? O A HOH 2264 ? ? 2.14 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2273 ? 5.89 . 2 1 O ? A HOH 2274 ? 6.08 . 3 1 O ? A HOH 2275 ? . 6.08 4 1 O ? A HOH 2276 ? 6.12 . 5 1 O ? A HOH 2277 ? 6.67 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1863 ? CG ? A LYS 11 CG 2 1 Y 1 A LYS 1863 ? CD ? A LYS 11 CD 3 1 Y 1 A LYS 1863 ? CE ? A LYS 11 CE 4 1 Y 1 A LYS 1863 ? NZ ? A LYS 11 NZ 5 1 Y 1 A LYS 1868 ? CE ? A LYS 16 CE 6 1 Y 1 A LYS 1868 ? NZ ? A LYS 16 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 1853 ? A TYR 1 2 1 Y 1 A PHE 1854 ? A PHE 2 3 1 Y 1 A GLN 1855 ? A GLN 3 4 1 Y 1 A LYS 1970 ? A LYS 118 5 1 Y 1 A VAL 1971 ? A VAL 119 6 1 Y 1 A SER 1972 ? A SER 120 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 '2,3-dihydro-1,4-benzodioxine-5-carboxylic acid' 53E 4 water HOH #