HEADER HYDROLASE 21-JUL-15 5CQC TITLE CRYSTAL STRUCTURE OF THE LEGIONELLA PNEUMOPHILA EFFECTOR PROTEIN RAVZ COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE RAVZ PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: LPG1683; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX6P1 KEYWDS ULP-FAMILY CYSTEINE PROTEASE, AUTOPHAGY INHIBITOR, PI3P BINDING KEYWDS 2 DOMAIN, LEGIONELLA PNEUMOPHILA EFFECTOR PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.A.HORENKAMP,K.M.REINISCH REVDAT 4 06-MAR-24 5CQC 1 REMARK REVDAT 3 30-SEP-15 5CQC 1 JRNL REVDAT 2 23-SEP-15 5CQC 1 JRNL REVDAT 1 09-SEP-15 5CQC 0 JRNL AUTH F.A.HORENKAMP,K.J.KAUFFMAN,L.J.KOHLER,R.K.SHERWOOD, JRNL AUTH 2 K.P.KRUEGER,V.SHTEYN,C.R.ROY,T.J.MELIA,K.M.REINISCH JRNL TITL THE LEGIONELLA ANTI-AUTOPHAGY EFFECTOR RAVZ TARGETS THE JRNL TITL 2 AUTOPHAGOSOME VIA PI3P- AND CURVATURE-SENSING MOTIFS. JRNL REF DEV.CELL V. 34 569 2015 JRNL REFN ISSN 1534-5807 JRNL PMID 26343456 JRNL DOI 10.1016/J.DEVCEL.2015.08.010 REMARK 2 REMARK 2 RESOLUTION. 2.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 18179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1818 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 68.9606 - 7.0162 0.96 1355 151 0.2015 0.2267 REMARK 3 2 7.0162 - 5.5697 0.99 1303 144 0.2449 0.2539 REMARK 3 3 5.5697 - 4.8659 0.99 1291 144 0.1868 0.1985 REMARK 3 4 4.8659 - 4.4211 0.99 1299 145 0.1703 0.1864 REMARK 3 5 4.4211 - 4.1042 0.99 1272 140 0.1892 0.2931 REMARK 3 6 4.1042 - 3.8623 0.99 1291 144 0.2042 0.2904 REMARK 3 7 3.8623 - 3.6689 0.99 1255 140 0.2198 0.2469 REMARK 3 8 3.6689 - 3.5092 0.99 1290 142 0.2164 0.3024 REMARK 3 9 3.5092 - 3.3741 0.99 1259 140 0.2878 0.3075 REMARK 3 10 3.3741 - 3.2577 1.00 1275 142 0.2641 0.3142 REMARK 3 11 3.2577 - 3.1558 1.00 1256 139 0.3090 0.3857 REMARK 3 12 3.1558 - 3.0656 0.97 1249 139 0.3682 0.4266 REMARK 3 13 3.0656 - 2.9849 0.77 966 108 0.3916 0.4484 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2653 REMARK 3 ANGLE : 1.329 3609 REMARK 3 CHIRALITY : 0.052 428 REMARK 3 PLANARITY : 0.005 460 REMARK 3 DIHEDRAL : 14.432 903 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 277.7170 187.2208 3.1378 REMARK 3 T TENSOR REMARK 3 T11: 0.6985 T22: 0.4480 REMARK 3 T33: 0.6864 T12: -0.0739 REMARK 3 T13: -0.0160 T23: 0.0834 REMARK 3 L TENSOR REMARK 3 L11: 5.1532 L22: 4.6440 REMARK 3 L33: 8.1669 L12: 0.3505 REMARK 3 L13: 0.4688 L23: 2.8961 REMARK 3 S TENSOR REMARK 3 S11: -0.2944 S12: 0.0486 S13: 0.3533 REMARK 3 S21: -0.3192 S22: 0.0667 S23: -0.0586 REMARK 3 S31: -0.5721 S32: -0.1821 S33: 0.2860 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 288.9077 180.9791 -6.3251 REMARK 3 T TENSOR REMARK 3 T11: 0.9138 T22: 0.7620 REMARK 3 T33: 0.8192 T12: -0.1783 REMARK 3 T13: 0.0335 T23: 0.0670 REMARK 3 L TENSOR REMARK 3 L11: 2.5210 L22: 7.4004 REMARK 3 L33: 4.8628 L12: -3.5722 REMARK 3 L13: -0.9987 L23: -1.6236 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: 0.4952 S13: 0.9204 REMARK 3 S21: -0.3643 S22: -0.0905 S23: -0.8412 REMARK 3 S31: -0.5009 S32: 0.7819 S33: 0.0946 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 429 ) REMARK 3 ORIGIN FOR THE GROUP (A): 279.7884 203.5680 22.7047 REMARK 3 T TENSOR REMARK 3 T11: 1.5120 T22: 0.5664 REMARK 3 T33: 1.2897 T12: -0.1154 REMARK 3 T13: -0.0563 T23: -0.0836 REMARK 3 L TENSOR REMARK 3 L11: 1.1550 L22: 1.8226 REMARK 3 L33: 5.5478 L12: 0.2186 REMARK 3 L13: -0.1395 L23: 2.1508 REMARK 3 S TENSOR REMARK 3 S11: 0.0697 S12: -0.1239 S13: 0.7190 REMARK 3 S21: -0.1280 S22: -0.0256 S23: 0.1130 REMARK 3 S31: -1.7614 S32: 0.2896 S33: -0.1124 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CQC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212032. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18194 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.980 REMARK 200 RESOLUTION RANGE LOW (A) : 110.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 3350, 0.2 M BACL2, 0.1 M MES, REMARK 280 PH 5.1, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 110.88900 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 36.26800 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 110.88900 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 36.26800 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 110.88900 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 36.26800 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 110.88900 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 36.26800 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 110.88900 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 36.26800 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 110.88900 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 36.26800 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 110.88900 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 36.26800 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 110.88900 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 110.88900 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 36.26800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 28 REMARK 465 SER A 29 REMARK 465 LYS A 30 REMARK 465 LEU A 31 REMARK 465 ILE A 32 REMARK 465 VAL A 33 REMARK 465 ASP A 34 REMARK 465 GLU A 35 REMARK 465 PHE A 36 REMARK 465 GLU A 37 REMARK 465 GLU A 38 REMARK 465 LEU A 39 REMARK 465 GLY A 40 REMARK 465 GLU A 41 REMARK 465 GLN A 42 REMARK 465 GLU A 43 REMARK 465 LEU A 44 REMARK 465 ASP A 45 REMARK 465 LYS A 46 REMARK 465 THR A 47 REMARK 465 THR A 48 REMARK 465 GLU A 92 REMARK 465 ASP A 93 REMARK 465 LYS A 94 REMARK 465 PRO A 95 REMARK 465 HIS A 249 REMARK 465 GLN A 250 REMARK 465 ASN A 251 REMARK 465 ARG A 252 REMARK 465 LEU A 253 REMARK 465 GLU A 278 REMARK 465 VAL A 279 REMARK 465 LYS A 280 REMARK 465 ILE A 281 REMARK 465 PRO A 282 REMARK 465 GLY A 283 REMARK 465 SER A 284 REMARK 465 GLY A 285 REMARK 465 TYR A 286 REMARK 465 ILE A 287 REMARK 465 SER A 347 REMARK 465 GLU A 348 REMARK 465 LYS A 349 REMARK 465 SER A 350 REMARK 465 MET A 351 REMARK 465 LEU A 352 REMARK 465 ASN A 353 REMARK 465 PHE A 354 REMARK 465 ILE A 355 REMARK 465 GLY A 356 REMARK 465 ASP A 430 REMARK 465 GLU A 431 REMARK 465 LEU A 432 REMARK 465 PHE A 433 REMARK 465 ASP A 434 REMARK 465 VAL A 435 REMARK 465 PRO A 436 REMARK 465 ASP A 437 REMARK 465 ILE A 438 REMARK 465 THR A 439 REMARK 465 GLY A 440 REMARK 465 GLU A 441 REMARK 465 GLU A 442 REMARK 465 LEU A 443 REMARK 465 ALA A 444 REMARK 465 SER A 445 REMARK 465 LYS A 446 REMARK 465 LYS A 447 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 ASP A 87 CG OD1 OD2 REMARK 470 LEU A 91 CG CD1 CD2 REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ASP A 108 CG OD1 OD2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 152 CG CD CE NZ REMARK 470 GLN A 155 CG CD OE1 NE2 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 ILE A 199 CG1 CG2 CD1 REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 202 CG OD1 OD2 REMARK 470 TYR A 204 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 206 CG CD OE1 OE2 REMARK 470 LEU A 208 CG CD1 CD2 REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 LEU A 239 CG CD1 CD2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 ASN A 248 CG OD1 ND2 REMARK 470 THR A 254 OG1 CG2 REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 ASN A 257 CG OD1 ND2 REMARK 470 THR A 277 OG1 CG2 REMARK 470 SER A 289 OG REMARK 470 ASN A 290 CG OD1 ND2 REMARK 470 GLN A 299 CG CD OE1 NE2 REMARK 470 GLU A 321 CG CD OE1 OE2 REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 ASP A 375 CG OD1 OD2 REMARK 470 LYS A 377 CG CD CE NZ REMARK 470 LYS A 379 CG CD CE NZ REMARK 470 ASN A 380 CG OD1 ND2 REMARK 470 GLU A 381 CG CD OE1 OE2 REMARK 470 ILE A 382 CG1 CG2 CD1 REMARK 470 SER A 383 OG REMARK 470 GLU A 384 CG CD OE1 OE2 REMARK 470 ASP A 388 CG OD1 OD2 REMARK 470 LYS A 392 CG CD CE NZ REMARK 470 GLU A 416 CG CD OE1 OE2 REMARK 470 LYS A 420 CG CD CE NZ REMARK 470 LEU A 421 CG CD1 CD2 REMARK 470 LYS A 427 CG CD CE NZ REMARK 470 ASP A 429 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 76 CG2 THR A 324 1.96 REMARK 500 OD1 ASP A 127 N LYS A 129 2.02 REMARK 500 O SER A 272 N GLY A 276 2.09 REMARK 500 OD1 ASP A 221 NH1 ARG A 244 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 58 19.19 56.43 REMARK 500 ARG A 201 -131.45 54.35 REMARK 500 LYS A 379 0.11 86.72 REMARK 500 SER A 400 -127.11 54.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A 501 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 135 O REMARK 620 2 ASP A 137 OD1 88.6 REMARK 620 3 ASP A 140 OD2 87.0 105.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BA A 501 DBREF 5CQC A 30 447 UNP Q5ZUV9 Q5ZUV9_LEGPH 10 458 SEQADV 5CQC GLY A 28 UNP Q5ZUV9 EXPRESSION TAG SEQADV 5CQC SER A 29 UNP Q5ZUV9 EXPRESSION TAG SEQADV 5CQC A UNP Q5ZUV9 GLU 23 DELETION SEQADV 5CQC A UNP Q5ZUV9 SER 24 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 25 DELETION SEQADV 5CQC A UNP Q5ZUV9 ILE 26 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 27 DELETION SEQADV 5CQC A UNP Q5ZUV9 GLU 28 DELETION SEQADV 5CQC A UNP Q5ZUV9 PHE 29 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 30 DELETION SEQADV 5CQC A UNP Q5ZUV9 LEU 31 DELETION SEQADV 5CQC A UNP Q5ZUV9 LEU 32 DELETION SEQADV 5CQC A UNP Q5ZUV9 GLU 33 DELETION SEQADV 5CQC A UNP Q5ZUV9 GLY 34 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 35 DELETION SEQADV 5CQC A UNP Q5ZUV9 GLU 36 DELETION SEQADV 5CQC A UNP Q5ZUV9 LYS 37 DELETION SEQADV 5CQC A UNP Q5ZUV9 LEU 38 DELETION SEQADV 5CQC A UNP Q5ZUV9 PRO 39 DELETION SEQADV 5CQC A UNP Q5ZUV9 GLY 40 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 41 DELETION SEQADV 5CQC A UNP Q5ZUV9 SER 42 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 430 DELETION SEQADV 5CQC A UNP Q5ZUV9 THR 431 DELETION SEQADV 5CQC A UNP Q5ZUV9 ILE 432 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 433 DELETION SEQADV 5CQC A UNP Q5ZUV9 ASP 434 DELETION SEQADV 5CQC A UNP Q5ZUV9 PHE 435 DELETION SEQADV 5CQC A UNP Q5ZUV9 VAL 436 DELETION SEQADV 5CQC A UNP Q5ZUV9 THR 437 DELETION SEQADV 5CQC A UNP Q5ZUV9 ILE 438 DELETION SEQADV 5CQC A UNP Q5ZUV9 GLU 439 DELETION SEQADV 5CQC A UNP Q5ZUV9 LYS 440 DELETION SEQRES 1 A 420 GLY SER LYS LEU ILE VAL ASP GLU PHE GLU GLU LEU GLY SEQRES 2 A 420 GLU GLN GLU LEU ASP LYS THR THR SER ILE TYR PRO PRO SEQRES 3 A 420 GLU THR SER TRP GLU VAL ASN LYS GLY MET ASN SER SER SEQRES 4 A 420 ARG LEU HIS LYS LEU TYR SER LEU PHE PHE ASP LYS SER SEQRES 5 A 420 SER ALA PHE TYR LEU GLY ASP ASP VAL SER VAL LEU GLU SEQRES 6 A 420 ASP LYS PRO LEU THR GLY ALA TYR GLY PHE GLN SER LYS SEQRES 7 A 420 LYS ASN ASP GLN GLN ILE PHE LEU PHE ARG PRO ASP SER SEQRES 8 A 420 ASP TYR VAL ALA GLY TYR HIS VAL ASP ALA LYS SER ASP SEQRES 9 A 420 ALA GLY TRP VAL ASN ASP LYS LEU ASP ARG ARG LEU SER SEQRES 10 A 420 GLU ILE SER GLU PHE CYS SER LYS ALA THR GLN PRO ALA SEQRES 11 A 420 THR PHE ILE LEU PRO PHE VAL GLU MET PRO THR ASP ILE SEQRES 12 A 420 THR LYS GLY VAL GLN HIS GLN VAL LEU LEU THR ILE SER SEQRES 13 A 420 TYR ASP PRO LYS SER LYS GLN LEU THR PRO THR VAL TYR SEQRES 14 A 420 ASP SER ILE GLY ARG ASP THR TYR SER GLU SER LEU SER SEQRES 15 A 420 SER TYR PHE LYS GLY LYS TYR ARG THR THR CYS ASP GLU SEQRES 16 A 420 ILE LEU THR GLN SER ILE GLU LYS ALA ILE LYS SER THR SEQRES 17 A 420 ASP PHE THR LEU GLY LYS PHE THR ARG ALA ALA TYR ASN SEQRES 18 A 420 HIS GLN ASN ARG LEU THR GLU GLY ASN CYS GLY SER TYR SEQRES 19 A 420 THR PHE ARG THR ILE LYS GLU VAL ILE SER SER SER ALA SEQRES 20 A 420 GLN GLY THR GLU VAL LYS ILE PRO GLY SER GLY TYR ILE SEQRES 21 A 420 THR SER ASN SER TYR LEU THR SER GLN HIS VAL GLN ASP SEQRES 22 A 420 ILE GLU SER CYS ILE LYS TYR ARG ASN LEU GLY VAL VAL SEQRES 23 A 420 ASP ILE GLU SER ALA LEU THR GLU GLY LYS THR LEU PRO SEQRES 24 A 420 VAL GLN LEU SER GLU PHE ILE VAL ALA LEU GLU ASP TYR SEQRES 25 A 420 GLY LYS LEU ARG SER GLN GLN SER GLU LYS SER MET LEU SEQRES 26 A 420 ASN PHE ILE GLY TYR SER LYS THR ALA LYS LEU THR ALA SEQRES 27 A 420 VAL GLU LEU LEU ILE GLY ILE LEU ASN ASP ILE LYS GLY SEQRES 28 A 420 LYS ASN GLU ILE SER GLU SER GLN TYR ASP LYS LEU VAL SEQRES 29 A 420 LYS GLU VAL ASP CYS LEU MET ASP SER SER LEU GLY LYS SEQRES 30 A 420 LEU VAL GLN PHE HIS LEU LYS ASN LEU GLY ALA GLU SER SEQRES 31 A 420 LEU GLN LYS LEU VAL LEU PRO CYS VAL LYS PHE ASP ASP SEQRES 32 A 420 GLU LEU PHE ASP VAL PRO ASP ILE THR GLY GLU GLU LEU SEQRES 33 A 420 ALA SER LYS LYS HET BA A 501 1 HETNAM BA BARIUM ION FORMUL 2 BA BA 2+ FORMUL 3 HOH *(H2 O) HELIX 1 AA1 ASN A 64 TYR A 72 1 9 HELIX 2 AA2 SER A 73 ASP A 77 5 5 HELIX 3 AA3 ASN A 136 ALA A 153 1 18 HELIX 4 AA4 SER A 209 TYR A 216 1 8 HELIX 5 AA5 CYS A 220 ILE A 232 1 13 HELIX 6 AA6 ASN A 257 GLY A 276 1 20 HELIX 7 AA7 THR A 294 ARG A 308 1 15 HELIX 8 AA8 VAL A 312 GLY A 322 1 11 HELIX 9 AA9 GLN A 328 GLN A 346 1 19 HELIX 10 AB1 SER A 358 GLY A 378 1 21 HELIX 11 AB2 GLU A 384 ASP A 399 1 16 HELIX 12 AB3 ASP A 399 ASN A 412 1 14 HELIX 13 AB4 SER A 417 LEU A 423 1 7 SHEET 1 AA1 2 ILE A 50 TYR A 51 0 SHEET 2 AA1 2 LEU A 310 GLY A 311 -1 O LEU A 310 N TYR A 51 SHEET 1 AA2 7 ASP A 87 SER A 89 0 SHEET 2 AA2 7 ALA A 99 SER A 104 -1 O GLN A 103 N VAL A 88 SHEET 3 AA2 7 GLN A 110 PHE A 114 -1 O ILE A 111 N PHE A 102 SHEET 4 AA2 7 ALA A 157 PRO A 167 1 O THR A 158 N PHE A 112 SHEET 5 AA2 7 HIS A 176 ASP A 185 -1 O HIS A 176 N GLU A 165 SHEET 6 AA2 7 GLN A 190 ASP A 197 -1 O TYR A 196 N LEU A 179 SHEET 7 AA2 7 THR A 238 LEU A 239 1 O THR A 238 N LEU A 191 SHEET 1 AA3 6 GLY A 133 VAL A 135 0 SHEET 2 AA3 6 VAL A 121 TYR A 124 -1 N GLY A 123 O TRP A 134 SHEET 3 AA3 6 ALA A 157 PRO A 167 1 O VAL A 164 N ALA A 122 SHEET 4 AA3 6 HIS A 176 ASP A 185 -1 O HIS A 176 N GLU A 165 SHEET 5 AA3 6 GLN A 190 ASP A 197 -1 O TYR A 196 N LEU A 179 SHEET 6 AA3 6 THR A 243 ALA A 246 1 O ALA A 245 N ASP A 197 SHEET 1 AA4 2 ILE A 382 SER A 383 0 SHEET 2 AA4 2 VAL A 426 LYS A 427 1 O LYS A 427 N ILE A 382 LINK O VAL A 135 BA BA A 501 1555 1555 3.08 LINK OD1 ASP A 137 BA BA A 501 1555 1555 2.77 LINK OD2 ASP A 140 BA BA A 501 1555 1555 3.23 SITE 1 AC1 3 VAL A 135 ASP A 137 ASP A 140 CRYST1 221.778 221.778 72.536 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004509 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004509 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013786 0.00000