data_5CQK # _entry.id 5CQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CQK pdb_00005cqk 10.2210/pdb5cqk/pdb WWPDB D_1000212041 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5CQD unspecified PDB . 5CQH unspecified PDB . 5CQK unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CQK _pdbx_database_status.recvd_initial_deposition_date 2015-07-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, K.' 1 'Kurahashi, K.' 2 'Aihara, H.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 290 _citation.language ? _citation.page_first 28120 _citation.page_last 28130 _citation.title 'Crystal Structure of the DNA Deaminase APOBEC3B Catalytic Domain.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.M115.679951 _citation.pdbx_database_id_PubMed 26416889 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, K.' 1 ? primary 'Carpenter, M.A.' 2 ? primary 'Kurahashi, K.' 3 ? primary 'Harris, R.S.' 4 ? primary 'Aihara, H.' 5 ? # _cell.entry_id 5CQK _cell.length_a 50.630 _cell.length_b 54.040 _cell.length_c 66.420 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CQK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA dC->dU-editing enzyme APOBEC-3B' 21978.963 1 3.5.4.- 'F200S, W228S, L230K, Y250S, F308K' 'UNP Residues 187-378' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 2 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'A3B,Phorbolin-1-related protein,Phorbolin-2/3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEILRYLMDPDTFTSNFNNDPLVLRRRQTYLCYEVERLDNGTSVKMDQHMGFLCNESGRHAELRFLDLVPSLQLDPAQIY RVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIKAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQG CPFQPWDGLEEHSQALSGRLRAILQL ; _entity_poly.pdbx_seq_one_letter_code_can ;MEILRYLMDPDTFTSNFNNDPLVLRRRQTYLCYEVERLDNGTSVKMDQHMGFLCNESGRHAELRFLDLVPSLQLDPAQIY RVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIKAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQG CPFQPWDGLEEHSQALSGRLRAILQL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ILE n 1 4 LEU n 1 5 ARG n 1 6 TYR n 1 7 LEU n 1 8 MET n 1 9 ASP n 1 10 PRO n 1 11 ASP n 1 12 THR n 1 13 PHE n 1 14 THR n 1 15 SER n 1 16 ASN n 1 17 PHE n 1 18 ASN n 1 19 ASN n 1 20 ASP n 1 21 PRO n 1 22 LEU n 1 23 VAL n 1 24 LEU n 1 25 ARG n 1 26 ARG n 1 27 ARG n 1 28 GLN n 1 29 THR n 1 30 TYR n 1 31 LEU n 1 32 CYS n 1 33 TYR n 1 34 GLU n 1 35 VAL n 1 36 GLU n 1 37 ARG n 1 38 LEU n 1 39 ASP n 1 40 ASN n 1 41 GLY n 1 42 THR n 1 43 SER n 1 44 VAL n 1 45 LYS n 1 46 MET n 1 47 ASP n 1 48 GLN n 1 49 HIS n 1 50 MET n 1 51 GLY n 1 52 PHE n 1 53 LEU n 1 54 CYS n 1 55 ASN n 1 56 GLU n 1 57 SER n 1 58 GLY n 1 59 ARG n 1 60 HIS n 1 61 ALA n 1 62 GLU n 1 63 LEU n 1 64 ARG n 1 65 PHE n 1 66 LEU n 1 67 ASP n 1 68 LEU n 1 69 VAL n 1 70 PRO n 1 71 SER n 1 72 LEU n 1 73 GLN n 1 74 LEU n 1 75 ASP n 1 76 PRO n 1 77 ALA n 1 78 GLN n 1 79 ILE n 1 80 TYR n 1 81 ARG n 1 82 VAL n 1 83 THR n 1 84 TRP n 1 85 PHE n 1 86 ILE n 1 87 SER n 1 88 TRP n 1 89 SER n 1 90 PRO n 1 91 CYS n 1 92 PHE n 1 93 SER n 1 94 TRP n 1 95 GLY n 1 96 CYS n 1 97 ALA n 1 98 GLY n 1 99 GLU n 1 100 VAL n 1 101 ARG n 1 102 ALA n 1 103 PHE n 1 104 LEU n 1 105 GLN n 1 106 GLU n 1 107 ASN n 1 108 THR n 1 109 HIS n 1 110 VAL n 1 111 ARG n 1 112 LEU n 1 113 ARG n 1 114 ILE n 1 115 LYS n 1 116 ALA n 1 117 ALA n 1 118 ARG n 1 119 ILE n 1 120 TYR n 1 121 ASP n 1 122 TYR n 1 123 ASP n 1 124 PRO n 1 125 LEU n 1 126 TYR n 1 127 LYS n 1 128 GLU n 1 129 ALA n 1 130 LEU n 1 131 GLN n 1 132 MET n 1 133 LEU n 1 134 ARG n 1 135 ASP n 1 136 ALA n 1 137 GLY n 1 138 ALA n 1 139 GLN n 1 140 VAL n 1 141 SER n 1 142 ILE n 1 143 MET n 1 144 THR n 1 145 TYR n 1 146 ASP n 1 147 GLU n 1 148 PHE n 1 149 GLU n 1 150 TYR n 1 151 CYS n 1 152 TRP n 1 153 ASP n 1 154 THR n 1 155 PHE n 1 156 VAL n 1 157 TYR n 1 158 ARG n 1 159 GLN n 1 160 GLY n 1 161 CYS n 1 162 PRO n 1 163 PHE n 1 164 GLN n 1 165 PRO n 1 166 TRP n 1 167 ASP n 1 168 GLY n 1 169 LEU n 1 170 GLU n 1 171 GLU n 1 172 HIS n 1 173 SER n 1 174 GLN n 1 175 ALA n 1 176 LEU n 1 177 SER n 1 178 GLY n 1 179 ARG n 1 180 LEU n 1 181 ARG n 1 182 ALA n 1 183 ILE n 1 184 LEU n 1 185 GLN n 1 186 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 186 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene APOBEC3B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ABC3B_HUMAN _struct_ref.pdbx_db_accession Q9UH17 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EILRYLMDPDTFTFNFNNDPLVLRRRQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCGFYGRHAELRFLDLVPSLQ LDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWD TFVYRQGCPFQPWDGLEEHSQALSGRLRAILQ ; _struct_ref.pdbx_align_begin 187 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5CQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 185 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UH17 _struct_ref_seq.db_align_beg 187 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 378 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 187 _struct_ref_seq.pdbx_auth_seq_align_end 378 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CQK MET A 1 ? UNP Q9UH17 ? ? 'initiating methionine' 186 1 1 5CQK SER A 15 ? UNP Q9UH17 PHE 200 'engineered mutation' 200 2 1 5CQK SER A 43 ? UNP Q9UH17 TRP 228 'engineered mutation' 228 3 1 5CQK LYS A 45 ? UNP Q9UH17 LEU 230 'engineered mutation' 230 4 1 5CQK ? A ? ? UNP Q9UH17 ALA 242 deletion ? 5 1 5CQK ? A ? ? UNP Q9UH17 LYS 243 deletion ? 6 1 5CQK ? A ? ? UNP Q9UH17 ASN 244 deletion ? 7 1 5CQK ? A ? ? UNP Q9UH17 LEU 245 deletion ? 8 1 5CQK ? A ? ? UNP Q9UH17 LEU 246 deletion ? 9 1 5CQK ? A ? ? UNP Q9UH17 CYS 247 deletion ? 10 1 5CQK ? A ? ? UNP Q9UH17 GLY 248 deletion ? 11 1 5CQK ? A ? ? UNP Q9UH17 PHE 249 deletion ? 12 1 5CQK SER A 57 ? UNP Q9UH17 TYR 250 'engineered mutation' 250 13 1 5CQK LYS A 115 ? UNP Q9UH17 PHE 308 'engineered mutation' 308 14 1 5CQK LEU A 186 ? UNP Q9UH17 ? ? 'expression tag' 379 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CQK _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG3350, MES-NaOH' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CQK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.880 _reflns.d_resolution_low 42 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13173 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.8 _reflns.pdbx_Rmerge_I_obs 0.207 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 0.168 _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5CQK _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13173 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.918 _refine.ls_d_res_high 1.880 _refine.ls_percent_reflns_obs 98.46 _refine.ls_R_factor_obs 0.1751 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1736 _refine.ls_R_factor_R_free 0.2032 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 701 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 5CQD _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.26 _refine.pdbx_overall_phase_error 20.76 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1498 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1625 _refine_hist.d_res_high 1.880 _refine_hist.d_res_low 41.918 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 1576 'X-RAY DIFFRACTION' ? f_angle_d 0.972 ? ? 2127 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.361 ? ? 929 'X-RAY DIFFRACTION' ? f_chiral_restr 0.055 ? ? 216 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 275 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.8801 1.9473 2664 0.3149 96.00 0.3502 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.9473 2.0252 2640 0.2820 98.00 0.2982 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.0252 2.1174 2683 0.2370 99.00 0.2701 . . 126 . . . . 'X-RAY DIFFRACTION' . 2.1174 2.2290 2650 0.2168 99.00 0.2345 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.2290 2.3687 2731 0.1996 99.00 0.2367 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.3687 2.5515 2692 0.1796 99.00 0.2437 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.5515 2.8082 2689 0.1609 99.00 0.2377 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.8082 3.2145 2699 0.1493 99.00 0.1905 . . 149 . . . . 'X-RAY DIFFRACTION' . 3.2145 4.0494 2681 0.1222 99.00 0.1484 . . 139 . . . . 'X-RAY DIFFRACTION' . 4.0494 41.9288 2671 0.1442 98.00 0.1490 . . 146 . . . . # _struct.entry_id 5CQK _struct.title 'Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CQK _struct_keywords.text 'APOBEC, deaminase, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 9 ? ASN A 18 ? ASP A 194 ASN A 203 1 ? 10 HELX_P HELX_P2 AA2 ASP A 47 ? MET A 50 ? ASP A 232 MET A 235 5 ? 4 HELX_P HELX_P3 AA3 HIS A 60 ? VAL A 69 ? HIS A 253 VAL A 262 1 ? 10 HELX_P HELX_P4 AA4 PRO A 70 ? GLN A 73 ? PRO A 263 GLN A 266 5 ? 4 HELX_P HELX_P5 AA5 GLY A 95 ? ASN A 107 ? GLY A 288 ASN A 300 1 ? 13 HELX_P HELX_P6 AA6 LEU A 125 ? ALA A 136 ? LEU A 318 ALA A 329 1 ? 12 HELX_P HELX_P7 AA7 THR A 144 ? VAL A 156 ? THR A 337 VAL A 349 1 ? 13 HELX_P HELX_P8 AA8 GLY A 168 ? GLN A 185 ? GLY A 361 GLN A 378 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 60 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 253 A ZN 401 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc2 metalc ? ? A ASP 67 OD1 ? ? ? 1_555 G NA . NA ? ? A ASP 260 A NA 406 1_555 ? ? ? ? ? ? ? 2.549 ? ? metalc3 metalc ? ? A CYS 91 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 284 A ZN 401 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc4 metalc ? ? A CYS 96 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 289 A ZN 401 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc5 metalc ? ? A ASP 121 O ? ? ? 1_555 G NA . NA ? ? A ASP 314 A NA 406 3_545 ? ? ? ? ? ? ? 2.669 ? ? metalc6 metalc ? ? B ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 401 A HOH 510 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc7 metalc ? ? E PGE . O1 ? ? ? 1_555 G NA . NA ? ? A PGE 404 A NA 406 1_555 ? ? ? ? ? ? ? 2.850 ? ? metalc8 metalc ? ? E PGE . O2 ? ? ? 1_555 G NA . NA ? ? A PGE 404 A NA 406 1_555 ? ? ? ? ? ? ? 2.774 ? ? metalc9 metalc ? ? F PGE . O4 ? ? ? 1_555 G NA . NA ? ? A PGE 405 A NA 406 1_555 ? ? ? ? ? ? ? 3.016 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 42 ? LYS A 45 ? THR A 227 LYS A 230 AA1 2 TYR A 30 ? ASP A 39 ? TYR A 215 ASP A 224 AA1 3 GLY A 51 ? CYS A 54 ? GLY A 236 CYS A 239 AA2 1 THR A 42 ? LYS A 45 ? THR A 227 LYS A 230 AA2 2 TYR A 30 ? ASP A 39 ? TYR A 215 ASP A 224 AA2 3 TYR A 80 ? TRP A 88 ? TYR A 273 TRP A 281 AA2 4 VAL A 110 ? ARG A 118 ? VAL A 303 ARG A 311 AA2 5 GLN A 139 ? ILE A 142 ? GLN A 332 ILE A 335 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 44 ? O VAL A 229 N ARG A 37 ? N ARG A 222 AA1 2 3 N TYR A 33 ? N TYR A 218 O GLY A 51 ? O GLY A 236 AA2 1 2 O VAL A 44 ? O VAL A 229 N ARG A 37 ? N ARG A 222 AA2 2 3 N CYS A 32 ? N CYS A 217 O PHE A 85 ? O PHE A 278 AA2 3 4 N VAL A 82 ? N VAL A 275 O ARG A 111 ? O ARG A 304 AA2 4 5 N ILE A 114 ? N ILE A 307 O GLN A 139 ? O GLN A 332 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 401 ? 4 'binding site for residue ZN A 401' AC2 Software A GOL 402 ? 10 'binding site for residue GOL A 402' AC3 Software A GOL 403 ? 11 'binding site for residue GOL A 403' AC4 Software A PGE 404 ? 7 'binding site for residue PGE A 404' AC5 Software A PGE 405 ? 9 'binding site for residue PGE A 405' AC6 Software A NA 406 ? 4 'binding site for residue NA A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 60 ? HIS A 253 . ? 1_555 ? 2 AC1 4 CYS A 91 ? CYS A 284 . ? 1_555 ? 3 AC1 4 CYS A 96 ? CYS A 289 . ? 1_555 ? 4 AC1 4 HOH H . ? HOH A 510 . ? 1_555 ? 5 AC2 10 ARG A 26 ? ARG A 211 . ? 1_555 ? 6 AC2 10 ARG A 27 ? ARG A 212 . ? 1_555 ? 7 AC2 10 GLN A 28 ? GLN A 213 . ? 1_555 ? 8 AC2 10 THR A 29 ? THR A 214 . ? 1_555 ? 9 AC2 10 ASN A 55 ? ASN A 240 . ? 1_555 ? 10 AC2 10 HIS A 60 ? HIS A 253 . ? 1_555 ? 11 AC2 10 TYR A 120 ? TYR A 313 . ? 1_555 ? 12 AC2 10 HOH H . ? HOH A 504 . ? 1_555 ? 13 AC2 10 HOH H . ? HOH A 505 . ? 1_555 ? 14 AC2 10 HOH H . ? HOH A 510 . ? 1_555 ? 15 AC3 11 TYR A 30 ? TYR A 215 . ? 1_555 ? 16 AC3 11 PHE A 52 ? PHE A 237 . ? 1_555 ? 17 AC3 11 CYS A 54 ? CYS A 239 . ? 1_555 ? 18 AC3 11 THR A 144 ? THR A 337 . ? 4_545 ? 19 AC3 11 TYR A 145 ? TYR A 338 . ? 4_545 ? 20 AC3 11 ASP A 146 ? ASP A 339 . ? 4_545 ? 21 AC3 11 HOH H . ? HOH A 503 . ? 1_555 ? 22 AC3 11 HOH H . ? HOH A 556 . ? 1_555 ? 23 AC3 11 HOH H . ? HOH A 558 . ? 1_555 ? 24 AC3 11 HOH H . ? HOH A 562 . ? 1_555 ? 25 AC3 11 HOH H . ? HOH A 570 . ? 1_555 ? 26 AC4 7 ARG A 59 ? ARG A 252 . ? 1_555 ? 27 AC4 7 LEU A 66 ? LEU A 259 . ? 1_555 ? 28 AC4 7 ASP A 67 ? ASP A 260 . ? 1_555 ? 29 AC4 7 ASP A 121 ? ASP A 314 . ? 3_555 ? 30 AC4 7 TYR A 122 ? TYR A 315 . ? 3_555 ? 31 AC4 7 PGE F . ? PGE A 405 . ? 1_555 ? 32 AC4 7 NA G . ? NA A 406 . ? 1_555 ? 33 AC5 9 PRO A 21 ? PRO A 206 . ? 3_555 ? 34 AC5 9 ARG A 59 ? ARG A 252 . ? 1_555 ? 35 AC5 9 LEU A 66 ? LEU A 259 . ? 1_555 ? 36 AC5 9 ASP A 67 ? ASP A 260 . ? 1_555 ? 37 AC5 9 GLU A 99 ? GLU A 292 . ? 1_555 ? 38 AC5 9 ASP A 121 ? ASP A 314 . ? 3_555 ? 39 AC5 9 TYR A 122 ? TYR A 315 . ? 3_555 ? 40 AC5 9 PGE E . ? PGE A 404 . ? 1_555 ? 41 AC5 9 NA G . ? NA A 406 . ? 1_555 ? 42 AC6 4 ASP A 67 ? ASP A 260 . ? 1_555 ? 43 AC6 4 ASP A 121 ? ASP A 314 . ? 3_555 ? 44 AC6 4 PGE E . ? PGE A 404 . ? 1_555 ? 45 AC6 4 PGE F . ? PGE A 405 . ? 1_555 ? # _atom_sites.entry_id 5CQK _atom_sites.fract_transf_matrix[1][1] 0.019751 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018505 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015056 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N NA O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 186 ? ? ? A . n A 1 2 GLU 2 187 ? ? ? A . n A 1 3 ILE 3 188 ? ? ? A . n A 1 4 LEU 4 189 ? ? ? A . n A 1 5 ARG 5 190 190 ARG ARG A . n A 1 6 TYR 6 191 191 TYR TYR A . n A 1 7 LEU 7 192 192 LEU LEU A . n A 1 8 MET 8 193 193 MET MET A . n A 1 9 ASP 9 194 194 ASP ASP A . n A 1 10 PRO 10 195 195 PRO PRO A . n A 1 11 ASP 11 196 196 ASP ASP A . n A 1 12 THR 12 197 197 THR THR A . n A 1 13 PHE 13 198 198 PHE PHE A . n A 1 14 THR 14 199 199 THR THR A . n A 1 15 SER 15 200 200 SER SER A . n A 1 16 ASN 16 201 201 ASN ASN A . n A 1 17 PHE 17 202 202 PHE PHE A . n A 1 18 ASN 18 203 203 ASN ASN A . n A 1 19 ASN 19 204 204 ASN ASN A . n A 1 20 ASP 20 205 205 ASP ASP A . n A 1 21 PRO 21 206 206 PRO PRO A . n A 1 22 LEU 22 207 207 LEU LEU A . n A 1 23 VAL 23 208 208 VAL VAL A . n A 1 24 LEU 24 209 209 LEU LEU A . n A 1 25 ARG 25 210 210 ARG ARG A . n A 1 26 ARG 26 211 211 ARG ARG A . n A 1 27 ARG 27 212 212 ARG ARG A . n A 1 28 GLN 28 213 213 GLN GLN A . n A 1 29 THR 29 214 214 THR THR A . n A 1 30 TYR 30 215 215 TYR TYR A . n A 1 31 LEU 31 216 216 LEU LEU A . n A 1 32 CYS 32 217 217 CYS CYS A . n A 1 33 TYR 33 218 218 TYR TYR A . n A 1 34 GLU 34 219 219 GLU GLU A . n A 1 35 VAL 35 220 220 VAL VAL A . n A 1 36 GLU 36 221 221 GLU GLU A . n A 1 37 ARG 37 222 222 ARG ARG A . n A 1 38 LEU 38 223 223 LEU LEU A . n A 1 39 ASP 39 224 224 ASP ASP A . n A 1 40 ASN 40 225 225 ASN ASN A . n A 1 41 GLY 41 226 226 GLY GLY A . n A 1 42 THR 42 227 227 THR THR A . n A 1 43 SER 43 228 228 SER SER A . n A 1 44 VAL 44 229 229 VAL VAL A . n A 1 45 LYS 45 230 230 LYS LYS A . n A 1 46 MET 46 231 231 MET MET A . n A 1 47 ASP 47 232 232 ASP ASP A . n A 1 48 GLN 48 233 233 GLN GLN A . n A 1 49 HIS 49 234 234 HIS HIS A . n A 1 50 MET 50 235 235 MET MET A . n A 1 51 GLY 51 236 236 GLY GLY A . n A 1 52 PHE 52 237 237 PHE PHE A . n A 1 53 LEU 53 238 238 LEU LEU A . n A 1 54 CYS 54 239 239 CYS CYS A . n A 1 55 ASN 55 240 240 ASN ASN A . n A 1 56 GLU 56 241 241 GLU GLU A . n A 1 57 SER 57 250 250 SER SER A . n A 1 58 GLY 58 251 251 GLY GLY A . n A 1 59 ARG 59 252 252 ARG ARG A . n A 1 60 HIS 60 253 253 HIS HIS A . n A 1 61 ALA 61 254 254 ALA ALA A . n A 1 62 GLU 62 255 255 GLU GLU A . n A 1 63 LEU 63 256 256 LEU LEU A . n A 1 64 ARG 64 257 257 ARG ARG A . n A 1 65 PHE 65 258 258 PHE PHE A . n A 1 66 LEU 66 259 259 LEU LEU A . n A 1 67 ASP 67 260 260 ASP ASP A . n A 1 68 LEU 68 261 261 LEU LEU A . n A 1 69 VAL 69 262 262 VAL VAL A . n A 1 70 PRO 70 263 263 PRO PRO A . n A 1 71 SER 71 264 264 SER SER A . n A 1 72 LEU 72 265 265 LEU LEU A . n A 1 73 GLN 73 266 266 GLN GLN A . n A 1 74 LEU 74 267 267 LEU LEU A . n A 1 75 ASP 75 268 268 ASP ASP A . n A 1 76 PRO 76 269 269 PRO PRO A . n A 1 77 ALA 77 270 270 ALA ALA A . n A 1 78 GLN 78 271 271 GLN GLN A . n A 1 79 ILE 79 272 272 ILE ILE A . n A 1 80 TYR 80 273 273 TYR TYR A . n A 1 81 ARG 81 274 274 ARG ARG A . n A 1 82 VAL 82 275 275 VAL VAL A . n A 1 83 THR 83 276 276 THR THR A . n A 1 84 TRP 84 277 277 TRP TRP A . n A 1 85 PHE 85 278 278 PHE PHE A . n A 1 86 ILE 86 279 279 ILE ILE A . n A 1 87 SER 87 280 280 SER SER A . n A 1 88 TRP 88 281 281 TRP TRP A . n A 1 89 SER 89 282 282 SER SER A . n A 1 90 PRO 90 283 283 PRO PRO A . n A 1 91 CYS 91 284 284 CYS CYS A . n A 1 92 PHE 92 285 285 PHE PHE A . n A 1 93 SER 93 286 286 SER SER A . n A 1 94 TRP 94 287 287 TRP TRP A . n A 1 95 GLY 95 288 288 GLY GLY A . n A 1 96 CYS 96 289 289 CYS CYS A . n A 1 97 ALA 97 290 290 ALA ALA A . n A 1 98 GLY 98 291 291 GLY GLY A . n A 1 99 GLU 99 292 292 GLU GLU A . n A 1 100 VAL 100 293 293 VAL VAL A . n A 1 101 ARG 101 294 294 ARG ARG A . n A 1 102 ALA 102 295 295 ALA ALA A . n A 1 103 PHE 103 296 296 PHE PHE A . n A 1 104 LEU 104 297 297 LEU LEU A . n A 1 105 GLN 105 298 298 GLN GLN A . n A 1 106 GLU 106 299 299 GLU GLU A . n A 1 107 ASN 107 300 300 ASN ASN A . n A 1 108 THR 108 301 301 THR THR A . n A 1 109 HIS 109 302 302 HIS HIS A . n A 1 110 VAL 110 303 303 VAL VAL A . n A 1 111 ARG 111 304 304 ARG ARG A . n A 1 112 LEU 112 305 305 LEU LEU A . n A 1 113 ARG 113 306 306 ARG ARG A . n A 1 114 ILE 114 307 307 ILE ILE A . n A 1 115 LYS 115 308 308 LYS LYS A . n A 1 116 ALA 116 309 309 ALA ALA A . n A 1 117 ALA 117 310 310 ALA ALA A . n A 1 118 ARG 118 311 311 ARG ARG A . n A 1 119 ILE 119 312 312 ILE ILE A . n A 1 120 TYR 120 313 313 TYR TYR A . n A 1 121 ASP 121 314 314 ASP ASP A . n A 1 122 TYR 122 315 315 TYR TYR A . n A 1 123 ASP 123 316 316 ASP ASP A . n A 1 124 PRO 124 317 317 PRO PRO A . n A 1 125 LEU 125 318 318 LEU LEU A . n A 1 126 TYR 126 319 319 TYR TYR A . n A 1 127 LYS 127 320 320 LYS LYS A . n A 1 128 GLU 128 321 321 GLU GLU A . n A 1 129 ALA 129 322 322 ALA ALA A . n A 1 130 LEU 130 323 323 LEU LEU A . n A 1 131 GLN 131 324 324 GLN GLN A . n A 1 132 MET 132 325 325 MET MET A . n A 1 133 LEU 133 326 326 LEU LEU A . n A 1 134 ARG 134 327 327 ARG ARG A . n A 1 135 ASP 135 328 328 ASP ASP A . n A 1 136 ALA 136 329 329 ALA ALA A . n A 1 137 GLY 137 330 330 GLY GLY A . n A 1 138 ALA 138 331 331 ALA ALA A . n A 1 139 GLN 139 332 332 GLN GLN A . n A 1 140 VAL 140 333 333 VAL VAL A . n A 1 141 SER 141 334 334 SER SER A . n A 1 142 ILE 142 335 335 ILE ILE A . n A 1 143 MET 143 336 336 MET MET A . n A 1 144 THR 144 337 337 THR THR A . n A 1 145 TYR 145 338 338 TYR TYR A . n A 1 146 ASP 146 339 339 ASP ASP A . n A 1 147 GLU 147 340 340 GLU GLU A . n A 1 148 PHE 148 341 341 PHE PHE A . n A 1 149 GLU 149 342 342 GLU GLU A . n A 1 150 TYR 150 343 343 TYR TYR A . n A 1 151 CYS 151 344 344 CYS CYS A . n A 1 152 TRP 152 345 345 TRP TRP A . n A 1 153 ASP 153 346 346 ASP ASP A . n A 1 154 THR 154 347 347 THR THR A . n A 1 155 PHE 155 348 348 PHE PHE A . n A 1 156 VAL 156 349 349 VAL VAL A . n A 1 157 TYR 157 350 350 TYR TYR A . n A 1 158 ARG 158 351 351 ARG ARG A . n A 1 159 GLN 159 352 352 GLN GLN A . n A 1 160 GLY 160 353 353 GLY GLY A . n A 1 161 CYS 161 354 354 CYS CYS A . n A 1 162 PRO 162 355 355 PRO PRO A . n A 1 163 PHE 163 356 356 PHE PHE A . n A 1 164 GLN 164 357 357 GLN GLN A . n A 1 165 PRO 165 358 358 PRO PRO A . n A 1 166 TRP 166 359 359 TRP TRP A . n A 1 167 ASP 167 360 360 ASP ASP A . n A 1 168 GLY 168 361 361 GLY GLY A . n A 1 169 LEU 169 362 362 LEU LEU A . n A 1 170 GLU 170 363 363 GLU GLU A . n A 1 171 GLU 171 364 364 GLU GLU A . n A 1 172 HIS 172 365 365 HIS HIS A . n A 1 173 SER 173 366 366 SER SER A . n A 1 174 GLN 174 367 367 GLN GLN A . n A 1 175 ALA 175 368 368 ALA ALA A . n A 1 176 LEU 176 369 369 LEU LEU A . n A 1 177 SER 177 370 370 SER SER A . n A 1 178 GLY 178 371 371 GLY GLY A . n A 1 179 ARG 179 372 372 ARG ARG A . n A 1 180 LEU 180 373 373 LEU LEU A . n A 1 181 ARG 181 374 374 ARG ARG A . n A 1 182 ALA 182 375 375 ALA ALA A . n A 1 183 ILE 183 376 376 ILE ILE A . n A 1 184 LEU 184 377 377 LEU LEU A . n A 1 185 GLN 185 378 378 GLN GLN A . n A 1 186 LEU 186 379 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 401 2 ZN ZN A . C 3 GOL 1 402 1 GOL GOL A . D 3 GOL 1 403 3 GOL GOL A . E 4 PGE 1 404 1 PGE PGE A . F 4 PGE 1 405 2 PGE PGE A . G 5 NA 1 406 1 NA NA A . H 6 HOH 1 501 55 HOH HOH A . H 6 HOH 2 502 18 HOH HOH A . H 6 HOH 3 503 77 HOH HOH A . H 6 HOH 4 504 22 HOH HOH A . H 6 HOH 5 505 67 HOH HOH A . H 6 HOH 6 506 89 HOH HOH A . H 6 HOH 7 507 70 HOH HOH A . H 6 HOH 8 508 85 HOH HOH A . H 6 HOH 9 509 8 HOH HOH A . H 6 HOH 10 510 50 HOH HOH A . H 6 HOH 11 511 21 HOH HOH A . H 6 HOH 12 512 48 HOH HOH A . H 6 HOH 13 513 16 HOH HOH A . H 6 HOH 14 514 4 HOH HOH A . H 6 HOH 15 515 41 HOH HOH A . H 6 HOH 16 516 51 HOH HOH A . H 6 HOH 17 517 88 HOH HOH A . H 6 HOH 18 518 62 HOH HOH A . H 6 HOH 19 519 36 HOH HOH A . H 6 HOH 20 520 14 HOH HOH A . H 6 HOH 21 521 75 HOH HOH A . H 6 HOH 22 522 39 HOH HOH A . H 6 HOH 23 523 5 HOH HOH A . H 6 HOH 24 524 9 HOH HOH A . H 6 HOH 25 525 66 HOH HOH A . H 6 HOH 26 526 3 HOH HOH A . H 6 HOH 27 527 7 HOH HOH A . H 6 HOH 28 528 32 HOH HOH A . H 6 HOH 29 529 53 HOH HOH A . H 6 HOH 30 530 30 HOH HOH A . H 6 HOH 31 531 1 HOH HOH A . H 6 HOH 32 532 19 HOH HOH A . H 6 HOH 33 533 27 HOH HOH A . H 6 HOH 34 534 6 HOH HOH A . H 6 HOH 35 535 10 HOH HOH A . H 6 HOH 36 536 17 HOH HOH A . H 6 HOH 37 537 29 HOH HOH A . H 6 HOH 38 538 82 HOH HOH A . H 6 HOH 39 539 23 HOH HOH A . H 6 HOH 40 540 69 HOH HOH A . H 6 HOH 41 541 54 HOH HOH A . H 6 HOH 42 542 34 HOH HOH A . H 6 HOH 43 543 40 HOH HOH A . H 6 HOH 44 544 56 HOH HOH A . H 6 HOH 45 545 25 HOH HOH A . H 6 HOH 46 546 24 HOH HOH A . H 6 HOH 47 547 52 HOH HOH A . H 6 HOH 48 548 15 HOH HOH A . H 6 HOH 49 549 57 HOH HOH A . H 6 HOH 50 550 38 HOH HOH A . H 6 HOH 51 551 31 HOH HOH A . H 6 HOH 52 552 46 HOH HOH A . H 6 HOH 53 553 65 HOH HOH A . H 6 HOH 54 554 12 HOH HOH A . H 6 HOH 55 555 59 HOH HOH A . H 6 HOH 56 556 35 HOH HOH A . H 6 HOH 57 557 33 HOH HOH A . H 6 HOH 58 558 43 HOH HOH A . H 6 HOH 59 559 11 HOH HOH A . H 6 HOH 60 560 2 HOH HOH A . H 6 HOH 61 561 98 HOH HOH A . H 6 HOH 62 562 83 HOH HOH A . H 6 HOH 63 563 13 HOH HOH A . H 6 HOH 64 564 93 HOH HOH A . H 6 HOH 65 565 20 HOH HOH A . H 6 HOH 66 566 60 HOH HOH A . H 6 HOH 67 567 72 HOH HOH A . H 6 HOH 68 568 26 HOH HOH A . H 6 HOH 69 569 49 HOH HOH A . H 6 HOH 70 570 45 HOH HOH A . H 6 HOH 71 571 28 HOH HOH A . H 6 HOH 72 572 47 HOH HOH A . H 6 HOH 73 573 68 HOH HOH A . H 6 HOH 74 574 64 HOH HOH A . H 6 HOH 75 575 63 HOH HOH A . H 6 HOH 76 576 61 HOH HOH A . H 6 HOH 77 577 86 HOH HOH A . H 6 HOH 78 578 87 HOH HOH A . H 6 HOH 79 579 84 HOH HOH A . H 6 HOH 80 580 95 HOH HOH A . H 6 HOH 81 581 91 HOH HOH A . H 6 HOH 82 582 76 HOH HOH A . H 6 HOH 83 583 80 HOH HOH A . H 6 HOH 84 584 97 HOH HOH A . H 6 HOH 85 585 78 HOH HOH A . H 6 HOH 86 586 74 HOH HOH A . H 6 HOH 87 587 58 HOH HOH A . H 6 HOH 88 588 90 HOH HOH A . H 6 HOH 89 589 81 HOH HOH A . H 6 HOH 90 590 37 HOH HOH A . H 6 HOH 91 591 92 HOH HOH A . H 6 HOH 92 592 42 HOH HOH A . H 6 HOH 93 593 79 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 60 ? A HIS 253 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 91 ? A CYS 284 ? 1_555 112.9 ? 2 ND1 ? A HIS 60 ? A HIS 253 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 96 ? A CYS 289 ? 1_555 109.3 ? 3 SG ? A CYS 91 ? A CYS 284 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 96 ? A CYS 289 ? 1_555 117.2 ? 4 ND1 ? A HIS 60 ? A HIS 253 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 O ? H HOH . ? A HOH 510 ? 1_555 103.8 ? 5 SG ? A CYS 91 ? A CYS 284 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 O ? H HOH . ? A HOH 510 ? 1_555 103.6 ? 6 SG ? A CYS 96 ? A CYS 289 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 O ? H HOH . ? A HOH 510 ? 1_555 108.9 ? 7 OD1 ? A ASP 67 ? A ASP 260 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O ? A ASP 121 ? A ASP 314 ? 1_555 43.2 ? 8 OD1 ? A ASP 67 ? A ASP 260 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O1 ? E PGE . ? A PGE 404 ? 1_555 103.4 ? 9 O ? A ASP 121 ? A ASP 314 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O1 ? E PGE . ? A PGE 404 ? 1_555 116.5 ? 10 OD1 ? A ASP 67 ? A ASP 260 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O2 ? E PGE . ? A PGE 404 ? 1_555 110.2 ? 11 O ? A ASP 121 ? A ASP 314 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O2 ? E PGE . ? A PGE 404 ? 1_555 152.6 ? 12 O1 ? E PGE . ? A PGE 404 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O2 ? E PGE . ? A PGE 404 ? 1_555 70.3 ? 13 OD1 ? A ASP 67 ? A ASP 260 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O4 ? F PGE . ? A PGE 405 ? 1_555 81.0 ? 14 O ? A ASP 121 ? A ASP 314 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O4 ? F PGE . ? A PGE 405 ? 1_555 67.6 ? 15 O1 ? E PGE . ? A PGE 404 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O4 ? F PGE . ? A PGE 405 ? 1_555 52.5 ? 16 O2 ? E PGE . ? A PGE 404 ? 1_555 NA ? G NA . ? A NA 406 ? 1_555 O4 ? F PGE . ? A PGE 405 ? 1_555 122.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-07 2 'Structure model' 1 1 2015-10-14 3 'Structure model' 1 2 2015-12-02 4 'Structure model' 1 3 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' citation 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' pdbx_struct_oper_list 8 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.value' 17 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -0.1677 -17.1047 2.1580 0.1436 0.1679 0.1654 0.0254 -0.0040 -0.0246 0.2273 0.3123 0.5071 0.2248 0.1666 0.1299 0.0058 0.1347 0.0877 0.1344 -0.0772 -0.0181 -0.0532 0.2054 0.3059 'X-RAY DIFFRACTION' 2 ? refined -10.9378 -0.5941 0.6916 0.1534 0.1420 0.1907 0.0474 -0.0077 0.0091 0.0618 0.0292 0.1515 -0.0049 0.0064 -0.0305 -0.0618 0.0201 -0.0524 0.0953 -0.0917 0.2115 -0.0401 -0.1449 0.0207 'X-RAY DIFFRACTION' 3 ? refined -10.6655 1.1085 -3.0646 0.1237 0.1217 0.1247 0.0012 -0.0269 0.0090 0.0143 0.1542 0.1140 0.0277 -0.0320 -0.0221 -0.0733 0.0156 -0.0214 -0.0539 -0.0240 0.0666 -0.1513 -0.0568 0.0346 'X-RAY DIFFRACTION' 4 ? refined 0.8800 -0.3383 8.2611 0.1633 0.1536 0.1384 -0.0232 0.0096 -0.0122 0.1485 0.0647 0.1132 -0.0503 -0.1169 0.0074 -0.1301 0.0362 -0.0022 -0.0248 0.1100 -0.1459 0.1277 -0.1265 0.2645 'X-RAY DIFFRACTION' 5 ? refined -12.3890 3.8877 4.2761 0.1428 0.1006 0.1895 0.0065 -0.0295 -0.0120 0.1000 0.1553 0.1466 0.0211 -0.0926 -0.0609 -0.0452 -0.0045 -0.0172 -0.1444 -0.0274 0.1854 0.1016 -0.1714 0.0447 'X-RAY DIFFRACTION' 6 ? refined -8.3393 -2.4161 14.1873 0.2033 0.1145 0.1316 0.0394 0.0227 -0.0168 0.3973 0.0618 0.1114 0.0440 0.0899 -0.0482 0.0466 -0.0051 0.0367 -0.1349 -0.0254 0.0145 -0.0604 -0.2489 -0.1388 'X-RAY DIFFRACTION' 7 ? refined -8.2532 -12.8262 18.9403 0.1759 0.1554 0.1613 0.0125 0.0206 -0.0194 0.0614 0.1632 0.0851 0.1034 0.0352 0.0756 0.0999 -0.0356 0.0115 -0.0377 -0.0975 -0.0222 0.2391 0.0693 -0.0311 'X-RAY DIFFRACTION' 8 ? refined -12.5955 -12.5721 0.7106 0.1207 0.1821 0.1425 -0.0140 0.0178 0.0181 0.1050 0.3366 0.0559 -0.0535 0.0321 -0.0510 -0.0665 0.0687 0.0113 0.1292 0.0650 0.1800 -0.0092 0.0278 -0.0750 'X-RAY DIFFRACTION' 9 ? refined -6.2777 -19.6654 -8.2855 0.1995 0.2546 0.1688 -0.0488 0.0108 -0.0379 0.0617 0.1726 0.0460 -0.0615 -0.0418 -0.0063 -0.1246 0.1949 0.0055 0.2083 -0.0951 0.0504 0.0252 0.0932 0.1961 'X-RAY DIFFRACTION' 10 ? refined -16.1145 -20.5058 11.9129 0.1814 0.1844 0.1517 -0.0118 -0.0068 0.0063 0.0655 0.0280 0.0217 0.0373 -0.0241 -0.0000 0.0600 -0.1144 0.0000 -0.0463 -0.2494 0.0528 0.0782 0.1611 -0.2220 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 190 A 214 '( CHAIN A AND RESID 190:214 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 215 A 224 '( CHAIN A AND RESID 215:224 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 225 A 239 '( CHAIN A AND RESID 225:239 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 240 A 265 '( CHAIN A AND RESID 240:265 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 266 A 279 '( CHAIN A AND RESID 266:279 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 280 A 309 '( CHAIN A AND RESID 280:309 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 310 A 328 '( CHAIN A AND RESID 310:328 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 329 A 348 '( CHAIN A AND RESID 329:348 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 349 A 361 '( CHAIN A AND RESID 349:361 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 362 A 378 '( CHAIN A AND RESID 362:378 )' ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(dev_2166: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG1 A THR 337 ? ? OE1 A GLU 340 ? ? 1.57 2 1 HE21 A GLN 298 ? ? O A HOH 507 ? ? 1.60 3 1 O A HOH 571 ? ? O A HOH 590 ? ? 2.07 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 210 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -164.25 _pdbx_validate_torsion.psi 36.66 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 190 ? CD ? A ARG 5 CD 2 1 Y 1 A ARG 190 ? NE ? A ARG 5 NE 3 1 Y 1 A ARG 190 ? CZ ? A ARG 5 CZ 4 1 Y 1 A ARG 190 ? NH1 ? A ARG 5 NH1 5 1 Y 1 A ARG 190 ? NH2 ? A ARG 5 NH2 6 1 Y 0 A ASN 225 ? CG ? A ASN 40 CG 7 1 Y 0 A ASN 225 ? OD1 ? A ASN 40 OD1 8 1 Y 0 A ASN 225 ? ND2 ? A ASN 40 ND2 9 1 Y 0 A ARG 306 ? NE ? A ARG 113 NE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 186 ? A MET 1 2 1 Y 1 A GLU 187 ? A GLU 2 3 1 Y 1 A ILE 188 ? A ILE 3 4 1 Y 1 A LEU 189 ? A LEU 4 5 1 Y 1 A LEU 379 ? A LEU 186 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NA NA NA N N 264 PGE C1 C N N 265 PGE O1 O N N 266 PGE C2 C N N 267 PGE O2 O N N 268 PGE C3 C N N 269 PGE C4 C N N 270 PGE O4 O N N 271 PGE C6 C N N 272 PGE C5 C N N 273 PGE O3 O N N 274 PGE H1 H N N 275 PGE H12 H N N 276 PGE HO1 H N N 277 PGE H2 H N N 278 PGE H22 H N N 279 PGE H3 H N N 280 PGE H32 H N N 281 PGE H4 H N N 282 PGE H42 H N N 283 PGE HO4 H N N 284 PGE H6 H N N 285 PGE H62 H N N 286 PGE H5 H N N 287 PGE H52 H N N 288 PHE N N N N 289 PHE CA C N S 290 PHE C C N N 291 PHE O O N N 292 PHE CB C N N 293 PHE CG C Y N 294 PHE CD1 C Y N 295 PHE CD2 C Y N 296 PHE CE1 C Y N 297 PHE CE2 C Y N 298 PHE CZ C Y N 299 PHE OXT O N N 300 PHE H H N N 301 PHE H2 H N N 302 PHE HA H N N 303 PHE HB2 H N N 304 PHE HB3 H N N 305 PHE HD1 H N N 306 PHE HD2 H N N 307 PHE HE1 H N N 308 PHE HE2 H N N 309 PHE HZ H N N 310 PHE HXT H N N 311 PRO N N N N 312 PRO CA C N S 313 PRO C C N N 314 PRO O O N N 315 PRO CB C N N 316 PRO CG C N N 317 PRO CD C N N 318 PRO OXT O N N 319 PRO H H N N 320 PRO HA H N N 321 PRO HB2 H N N 322 PRO HB3 H N N 323 PRO HG2 H N N 324 PRO HG3 H N N 325 PRO HD2 H N N 326 PRO HD3 H N N 327 PRO HXT H N N 328 SER N N N N 329 SER CA C N S 330 SER C C N N 331 SER O O N N 332 SER CB C N N 333 SER OG O N N 334 SER OXT O N N 335 SER H H N N 336 SER H2 H N N 337 SER HA H N N 338 SER HB2 H N N 339 SER HB3 H N N 340 SER HG H N N 341 SER HXT H N N 342 THR N N N N 343 THR CA C N S 344 THR C C N N 345 THR O O N N 346 THR CB C N R 347 THR OG1 O N N 348 THR CG2 C N N 349 THR OXT O N N 350 THR H H N N 351 THR H2 H N N 352 THR HA H N N 353 THR HB H N N 354 THR HG1 H N N 355 THR HG21 H N N 356 THR HG22 H N N 357 THR HG23 H N N 358 THR HXT H N N 359 TRP N N N N 360 TRP CA C N S 361 TRP C C N N 362 TRP O O N N 363 TRP CB C N N 364 TRP CG C Y N 365 TRP CD1 C Y N 366 TRP CD2 C Y N 367 TRP NE1 N Y N 368 TRP CE2 C Y N 369 TRP CE3 C Y N 370 TRP CZ2 C Y N 371 TRP CZ3 C Y N 372 TRP CH2 C Y N 373 TRP OXT O N N 374 TRP H H N N 375 TRP H2 H N N 376 TRP HA H N N 377 TRP HB2 H N N 378 TRP HB3 H N N 379 TRP HD1 H N N 380 TRP HE1 H N N 381 TRP HE3 H N N 382 TRP HZ2 H N N 383 TRP HZ3 H N N 384 TRP HH2 H N N 385 TRP HXT H N N 386 TYR N N N N 387 TYR CA C N S 388 TYR C C N N 389 TYR O O N N 390 TYR CB C N N 391 TYR CG C Y N 392 TYR CD1 C Y N 393 TYR CD2 C Y N 394 TYR CE1 C Y N 395 TYR CE2 C Y N 396 TYR CZ C Y N 397 TYR OH O N N 398 TYR OXT O N N 399 TYR H H N N 400 TYR H2 H N N 401 TYR HA H N N 402 TYR HB2 H N N 403 TYR HB3 H N N 404 TYR HD1 H N N 405 TYR HD2 H N N 406 TYR HE1 H N N 407 TYR HE2 H N N 408 TYR HH H N N 409 TYR HXT H N N 410 VAL N N N N 411 VAL CA C N S 412 VAL C C N N 413 VAL O O N N 414 VAL CB C N N 415 VAL CG1 C N N 416 VAL CG2 C N N 417 VAL OXT O N N 418 VAL H H N N 419 VAL H2 H N N 420 VAL HA H N N 421 VAL HB H N N 422 VAL HG11 H N N 423 VAL HG12 H N N 424 VAL HG13 H N N 425 VAL HG21 H N N 426 VAL HG22 H N N 427 VAL HG23 H N N 428 VAL HXT H N N 429 ZN ZN ZN N N 430 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PGE C1 O1 sing N N 250 PGE C1 C2 sing N N 251 PGE C1 H1 sing N N 252 PGE C1 H12 sing N N 253 PGE O1 HO1 sing N N 254 PGE C2 O2 sing N N 255 PGE C2 H2 sing N N 256 PGE C2 H22 sing N N 257 PGE O2 C3 sing N N 258 PGE C3 C4 sing N N 259 PGE C3 H3 sing N N 260 PGE C3 H32 sing N N 261 PGE C4 O3 sing N N 262 PGE C4 H4 sing N N 263 PGE C4 H42 sing N N 264 PGE O4 C6 sing N N 265 PGE O4 HO4 sing N N 266 PGE C6 C5 sing N N 267 PGE C6 H6 sing N N 268 PGE C6 H62 sing N N 269 PGE C5 O3 sing N N 270 PGE C5 H5 sing N N 271 PGE C5 H52 sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TRP N CA sing N N 342 TRP N H sing N N 343 TRP N H2 sing N N 344 TRP CA C sing N N 345 TRP CA CB sing N N 346 TRP CA HA sing N N 347 TRP C O doub N N 348 TRP C OXT sing N N 349 TRP CB CG sing N N 350 TRP CB HB2 sing N N 351 TRP CB HB3 sing N N 352 TRP CG CD1 doub Y N 353 TRP CG CD2 sing Y N 354 TRP CD1 NE1 sing Y N 355 TRP CD1 HD1 sing N N 356 TRP CD2 CE2 doub Y N 357 TRP CD2 CE3 sing Y N 358 TRP NE1 CE2 sing Y N 359 TRP NE1 HE1 sing N N 360 TRP CE2 CZ2 sing Y N 361 TRP CE3 CZ3 doub Y N 362 TRP CE3 HE3 sing N N 363 TRP CZ2 CH2 doub Y N 364 TRP CZ2 HZ2 sing N N 365 TRP CZ3 CH2 sing Y N 366 TRP CZ3 HZ3 sing N N 367 TRP CH2 HH2 sing N N 368 TRP OXT HXT sing N N 369 TYR N CA sing N N 370 TYR N H sing N N 371 TYR N H2 sing N N 372 TYR CA C sing N N 373 TYR CA CB sing N N 374 TYR CA HA sing N N 375 TYR C O doub N N 376 TYR C OXT sing N N 377 TYR CB CG sing N N 378 TYR CB HB2 sing N N 379 TYR CB HB3 sing N N 380 TYR CG CD1 doub Y N 381 TYR CG CD2 sing Y N 382 TYR CD1 CE1 sing Y N 383 TYR CD1 HD1 sing N N 384 TYR CD2 CE2 doub Y N 385 TYR CD2 HD2 sing N N 386 TYR CE1 CZ doub Y N 387 TYR CE1 HE1 sing N N 388 TYR CE2 CZ sing Y N 389 TYR CE2 HE2 sing N N 390 TYR CZ OH sing N N 391 TYR OH HH sing N N 392 TYR OXT HXT sing N N 393 VAL N CA sing N N 394 VAL N H sing N N 395 VAL N H2 sing N N 396 VAL CA C sing N N 397 VAL CA CB sing N N 398 VAL CA HA sing N N 399 VAL C O doub N N 400 VAL C OXT sing N N 401 VAL CB CG1 sing N N 402 VAL CB CG2 sing N N 403 VAL CB HB sing N N 404 VAL CG1 HG11 sing N N 405 VAL CG1 HG12 sing N N 406 VAL CG1 HG13 sing N N 407 VAL CG2 HG21 sing N N 408 VAL CG2 HG22 sing N N 409 VAL CG2 HG23 sing N N 410 VAL OXT HXT sing N N 411 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 GLYCEROL GOL 4 'TRIETHYLENE GLYCOL' PGE 5 'SODIUM ION' NA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5CQD _pdbx_initial_refinement_model.details ? #