HEADER UNKNOWN FUNCTION 22-JUL-15 5CQV TITLE CRYSTAL STRUCTURE OF UNCHARACTERIZED PROTEIN Q8DWV2 FROM STREPTOCOCCUS TITLE 2 AGALACTIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE SEROTYPE V (STRAIN SOURCE 3 ATCC BAA-611 / 2603 V/R); SOURCE 4 ORGANISM_TAXID: 208435; SOURCE 5 ATCC: BAA-611; SOURCE 6 GENE: SAG2111; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS DUF1706, DFSB, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.D.TAYLOR,S.HARE,S.J.MATTHEWS REVDAT 4 10-JAN-24 5CQV 1 REMARK REVDAT 3 24-JAN-18 5CQV 1 SOURCE REVDAT 2 02-MAR-16 5CQV 1 JRNL REVDAT 1 03-FEB-16 5CQV 0 JRNL AUTH J.D.TAYLOR,G.TAYLOR,S.A.HARE,S.J.MATTHEWS JRNL TITL STRUCTURES OF THE DFSB PROTEIN FAMILY SUGGEST A CATIONIC, JRNL TITL 2 HELICAL SIBLING LETHAL FACTOR PEPTIDE. JRNL REF J.MOL.BIOL. V. 428 554 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 26804569 JRNL DOI 10.1016/J.JMB.2016.01.013 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 26510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1343 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.1613 - 4.0834 0.98 2574 142 0.1654 0.2032 REMARK 3 2 4.0834 - 3.2455 0.99 2534 138 0.1595 0.1817 REMARK 3 3 3.2455 - 2.8365 0.97 2499 137 0.1811 0.2339 REMARK 3 4 2.8365 - 2.5778 0.99 2537 143 0.1824 0.2311 REMARK 3 5 2.5778 - 2.3933 0.99 2555 120 0.1859 0.2534 REMARK 3 6 2.3933 - 2.2524 0.99 2505 133 0.1747 0.2273 REMARK 3 7 2.2524 - 2.1397 0.96 2459 122 0.1873 0.2431 REMARK 3 8 2.1397 - 2.0467 0.98 2504 125 0.2020 0.2397 REMARK 3 9 2.0467 - 1.9680 0.99 2516 146 0.2196 0.2580 REMARK 3 10 1.9680 - 1.9001 0.98 2484 137 0.2453 0.2692 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2952 REMARK 3 ANGLE : 1.099 4009 REMARK 3 CHIRALITY : 0.042 442 REMARK 3 PLANARITY : 0.005 501 REMARK 3 DIHEDRAL : 15.025 1111 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5788 8.8465 2.5503 REMARK 3 T TENSOR REMARK 3 T11: 0.1601 T22: 0.1250 REMARK 3 T33: 0.1601 T12: 0.0038 REMARK 3 T13: 0.0067 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 1.3399 L22: 0.9094 REMARK 3 L33: 2.3685 L12: -0.6489 REMARK 3 L13: -0.9039 L23: 0.8658 REMARK 3 S TENSOR REMARK 3 S11: -0.0691 S12: 0.1615 S13: -0.1157 REMARK 3 S21: -0.0938 S22: -0.0543 S23: 0.0978 REMARK 3 S31: 0.1166 S32: -0.2044 S33: 0.0817 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4846 -5.3655 -0.5942 REMARK 3 T TENSOR REMARK 3 T11: 1.3966 T22: 1.2589 REMARK 3 T33: 0.8188 T12: -0.0975 REMARK 3 T13: 0.1663 T23: -0.1586 REMARK 3 L TENSOR REMARK 3 L11: 4.4673 L22: 3.1849 REMARK 3 L33: 1.1690 L12: 2.9089 REMARK 3 L13: 1.1049 L23: 0.1832 REMARK 3 S TENSOR REMARK 3 S11: -0.0449 S12: 0.4932 S13: -0.2502 REMARK 3 S21: -0.5425 S22: -0.5547 S23: 0.1111 REMARK 3 S31: 0.3131 S32: -1.5957 S33: 0.7067 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1393 1.2333 1.1269 REMARK 3 T TENSOR REMARK 3 T11: 0.1799 T22: 0.2113 REMARK 3 T33: 0.1958 T12: -0.0111 REMARK 3 T13: 0.0371 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.6242 L22: 1.9101 REMARK 3 L33: 3.5576 L12: -0.2539 REMARK 3 L13: 0.0245 L23: 1.2792 REMARK 3 S TENSOR REMARK 3 S11: -0.0875 S12: -0.0548 S13: -0.0549 REMARK 3 S21: 0.2860 S22: -0.3414 S23: 0.3495 REMARK 3 S31: 0.4069 S32: -1.0138 S33: -0.1525 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7931 11.9637 -12.9695 REMARK 3 T TENSOR REMARK 3 T11: 0.1570 T22: 0.3430 REMARK 3 T33: 0.1603 T12: 0.0180 REMARK 3 T13: -0.0334 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.2816 L22: 1.5052 REMARK 3 L33: 2.3100 L12: -0.6693 REMARK 3 L13: -0.1814 L23: 0.3703 REMARK 3 S TENSOR REMARK 3 S11: 0.0955 S12: 0.2097 S13: -0.1331 REMARK 3 S21: 0.1683 S22: -0.0628 S23: 0.1455 REMARK 3 S31: 0.1073 S32: -0.3215 S33: 0.0624 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8142 20.0542 -17.8193 REMARK 3 T TENSOR REMARK 3 T11: 0.2623 T22: 0.3628 REMARK 3 T33: 0.2311 T12: 0.0623 REMARK 3 T13: -0.0043 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 2.2881 L22: 0.8219 REMARK 3 L33: 1.9336 L12: -0.9131 REMARK 3 L13: -0.6722 L23: 0.6403 REMARK 3 S TENSOR REMARK 3 S11: 0.0928 S12: -0.0427 S13: 0.2005 REMARK 3 S21: -0.0770 S22: -0.0693 S23: 0.1190 REMARK 3 S31: -0.2992 S32: -0.6213 S33: -0.0335 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7108 8.5916 -27.9747 REMARK 3 T TENSOR REMARK 3 T11: 0.7340 T22: 1.4941 REMARK 3 T33: 1.0699 T12: 0.0174 REMARK 3 T13: -0.0090 T23: -0.1388 REMARK 3 L TENSOR REMARK 3 L11: 4.6541 L22: 4.6043 REMARK 3 L33: 1.0735 L12: -3.7361 REMARK 3 L13: -2.1837 L23: 1.7576 REMARK 3 S TENSOR REMARK 3 S11: -0.2782 S12: -0.0373 S13: -0.8825 REMARK 3 S21: -0.6422 S22: 1.2301 S23: -0.2547 REMARK 3 S31: 0.4973 S32: 0.4349 S33: -0.9120 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5329 14.3228 -30.4200 REMARK 3 T TENSOR REMARK 3 T11: 0.5784 T22: 0.9247 REMARK 3 T33: 0.6380 T12: -0.0178 REMARK 3 T13: 0.0236 T23: -0.1018 REMARK 3 L TENSOR REMARK 3 L11: 4.3693 L22: 6.8582 REMARK 3 L33: 5.9622 L12: -1.8952 REMARK 3 L13: -1.2877 L23: 4.6319 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: 1.1912 S13: -1.3364 REMARK 3 S21: -0.8154 S22: -0.9837 S23: 0.3054 REMARK 3 S31: 0.3031 S32: -1.0422 S33: 0.8056 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 110 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1191 23.0871 -16.4735 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 1.0304 REMARK 3 T33: 0.3368 T12: 0.4050 REMARK 3 T13: -0.0308 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.8264 L22: 0.8412 REMARK 3 L33: 1.2293 L12: 0.1445 REMARK 3 L13: -0.6552 L23: 0.8610 REMARK 3 S TENSOR REMARK 3 S11: 0.1477 S12: -0.0856 S13: 0.7870 REMARK 3 S21: -0.5605 S22: -0.3942 S23: 0.3556 REMARK 3 S31: -0.7567 S32: -1.4534 S33: -1.0165 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7089 6.0348 -17.1350 REMARK 3 T TENSOR REMARK 3 T11: 0.4593 T22: 0.9231 REMARK 3 T33: 0.5726 T12: -0.0648 REMARK 3 T13: -0.0169 T23: -0.1917 REMARK 3 L TENSOR REMARK 3 L11: 1.6483 L22: 1.7226 REMARK 3 L33: 2.0119 L12: -1.0858 REMARK 3 L13: 1.5095 L23: -0.9884 REMARK 3 S TENSOR REMARK 3 S11: 0.3084 S12: 0.0009 S13: -0.2749 REMARK 3 S21: 0.1888 S22: -0.1470 S23: 0.7838 REMARK 3 S31: 0.6484 S32: -1.1225 S33: -0.1702 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6731 15.5347 0.7385 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.1461 REMARK 3 T33: 0.1455 T12: 0.0253 REMARK 3 T13: -0.0116 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 1.2998 L22: 3.4742 REMARK 3 L33: 2.7995 L12: -1.1460 REMARK 3 L13: -1.5851 L23: 2.5555 REMARK 3 S TENSOR REMARK 3 S11: 0.0975 S12: 0.2125 S13: 0.0109 REMARK 3 S21: -0.1254 S22: -0.2592 S23: 0.3319 REMARK 3 S31: -0.1997 S32: -0.5170 S33: 0.0538 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CQV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212053. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91730 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26530 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.43900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5COM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12 M DIETHYLENE GLYCOL, 0.12 M REMARK 280 TRIETHYLENE GLYCOL, 0.12 M TETRAETHYLENE GLYCOL, 0.12 M REMARK 280 PENTAETHYLENE GLYCOL, 0.1 M TRIS, 0.1 M BICINE, PH 8.5, 5% MPD, REMARK 280 12% PEG 550 MME, 6% PEG 20,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.96500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 ASN A 151 REMARK 465 ALA A 152 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 GLY B 11 REMARK 465 SER B 12 REMARK 465 ASN B 151 REMARK 465 ALA B 152 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 133 O HOH A 301 2.02 REMARK 500 NZ LYS B 44 O HOH B 301 2.09 REMARK 500 O HOH B 341 O HOH B 365 2.10 REMARK 500 NE2 GLN A 77 O HOH A 302 2.15 REMARK 500 OD1 ASP A 52 O HOH A 303 2.18 REMARK 500 OD1 ASP B 75 O HOH B 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 375 O HOH B 347 2645 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 164 -82.71 -131.61 REMARK 500 THR B 164 -84.38 -131.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MRD B 201 DBREF 5CQV A 13 184 UNP Q8DWV2 Q8DWV2_STRA5 2 173 DBREF 5CQV B 13 184 UNP Q8DWV2 Q8DWV2_STRA5 2 173 SEQADV 5CQV MET A 1 UNP Q8DWV2 INITIATING METHIONINE SEQADV 5CQV ARG A 2 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV GLY A 3 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV SER A 4 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS A 5 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS A 6 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS A 7 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS A 8 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS A 9 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS A 10 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV GLY A 11 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV SER A 12 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV MET B 1 UNP Q8DWV2 INITIATING METHIONINE SEQADV 5CQV ARG B 2 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV GLY B 3 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV SER B 4 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS B 5 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS B 6 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS B 7 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS B 8 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS B 9 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV HIS B 10 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV GLY B 11 UNP Q8DWV2 EXPRESSION TAG SEQADV 5CQV SER B 12 UNP Q8DWV2 EXPRESSION TAG SEQRES 1 A 184 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ARG SEQRES 2 A 184 THR TYR SER ASP LYS ASN GLU LEU LYS GLU GLU VAL LEU SEQRES 3 A 184 LYS SER TYR LYS LYS TYR ILE ALA GLU PHE ASN ASP ILE SEQRES 4 A 184 PRO GLU LYS LEU LYS ASP LEU ARG ILE ASP GLU VAL ASP SEQRES 5 A 184 ARG THR PRO ALA GLU ASN LEU ALA TYR GLN VAL GLY TRP SEQRES 6 A 184 THR THR LEU ILE LEU LYS TRP GLU SER ASP GLU GLN SER SEQRES 7 A 184 GLY LEU GLU VAL LYS THR PRO THR GLU THR PHE LYS TRP SEQRES 8 A 184 ASN GLN LEU GLY GLU LEU TYR GLN HIS PHE THR GLU THR SEQRES 9 A 184 TYR ALA SER LEU THR ILE LYS GLU LEU THR ALA GLN LEU SEQRES 10 A 184 ASN ASP ASN VAL ASP ALA ILE GLY ASN MET ILE ASP SER SEQRES 11 A 184 MET SER ASP GLU VAL LEU PHE LYS PRO HIS MET ARG ASN SEQRES 12 A 184 TRP ALA ASP SER ALA THR LYS ASN ALA VAL TRP GLU VAL SEQRES 13 A 184 TYR LYS PHE ILE HIS ILE ASN THR VAL ALA PRO PHE GLY SEQRES 14 A 184 THR PHE ARG THR LYS ILE ARG LYS TRP LYS LYS VAL ALA SEQRES 15 A 184 LEU LYS SEQRES 1 B 184 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ARG SEQRES 2 B 184 THR TYR SER ASP LYS ASN GLU LEU LYS GLU GLU VAL LEU SEQRES 3 B 184 LYS SER TYR LYS LYS TYR ILE ALA GLU PHE ASN ASP ILE SEQRES 4 B 184 PRO GLU LYS LEU LYS ASP LEU ARG ILE ASP GLU VAL ASP SEQRES 5 B 184 ARG THR PRO ALA GLU ASN LEU ALA TYR GLN VAL GLY TRP SEQRES 6 B 184 THR THR LEU ILE LEU LYS TRP GLU SER ASP GLU GLN SER SEQRES 7 B 184 GLY LEU GLU VAL LYS THR PRO THR GLU THR PHE LYS TRP SEQRES 8 B 184 ASN GLN LEU GLY GLU LEU TYR GLN HIS PHE THR GLU THR SEQRES 9 B 184 TYR ALA SER LEU THR ILE LYS GLU LEU THR ALA GLN LEU SEQRES 10 B 184 ASN ASP ASN VAL ASP ALA ILE GLY ASN MET ILE ASP SER SEQRES 11 B 184 MET SER ASP GLU VAL LEU PHE LYS PRO HIS MET ARG ASN SEQRES 12 B 184 TRP ALA ASP SER ALA THR LYS ASN ALA VAL TRP GLU VAL SEQRES 13 B 184 TYR LYS PHE ILE HIS ILE ASN THR VAL ALA PRO PHE GLY SEQRES 14 B 184 THR PHE ARG THR LYS ILE ARG LYS TRP LYS LYS VAL ALA SEQRES 15 B 184 LEU LYS HET MPD A 201 8 HET MRD B 201 8 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL FORMUL 3 MPD C6 H14 O2 FORMUL 4 MRD C6 H14 O2 FORMUL 5 HOH *166(H2 O) HELIX 1 AA1 ASP A 17 GLU A 35 1 19 HELIX 2 AA2 PRO A 40 LYS A 44 5 5 HELIX 3 AA3 THR A 54 SER A 78 1 25 HELIX 4 AA4 LYS A 90 ASN A 92 5 3 HELIX 5 AA5 GLN A 93 ALA A 106 1 14 HELIX 6 AA6 THR A 109 MET A 131 1 23 HELIX 7 AA7 SER A 132 LYS A 138 1 7 HELIX 8 AA8 ARG A 142 LYS A 150 1 9 HELIX 9 AA9 GLU A 155 THR A 164 1 10 HELIX 10 AB1 THR A 164 LEU A 183 1 20 HELIX 11 AB2 ASP B 17 GLU B 35 1 19 HELIX 12 AB3 PRO B 40 LYS B 44 5 5 HELIX 13 AB4 THR B 54 SER B 78 1 25 HELIX 14 AB5 GLN B 93 TYR B 105 1 13 HELIX 15 AB6 THR B 109 MET B 131 1 23 HELIX 16 AB7 SER B 132 LYS B 138 1 7 HELIX 17 AB8 ARG B 142 LYS B 150 1 9 HELIX 18 AB9 GLU B 155 THR B 164 1 10 HELIX 19 AC1 THR B 164 LEU B 183 1 20 CISPEP 1 THR A 84 PRO A 85 0 -1.32 SITE 1 AC1 6 THR A 14 ILE A 162 ALA A 166 PRO A 167 SITE 2 AC1 6 THR A 170 LYS B 158 SITE 1 AC2 3 LYS A 158 THR B 14 THR B 170 CRYST1 51.940 65.930 55.750 90.00 114.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019253 0.000000 0.008864 0.00000 SCALE2 0.000000 0.015168 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019747 0.00000