data_5CUM # _entry.id 5CUM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CUM pdb_00005cum 10.2210/pdb5cum/pdb WWPDB D_1000212216 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '1ZMP is the native structure without the mutation.' 1ZMP unspecified PDB . 5CUI unspecified PDB . 5CUM unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CUM _pdbx_database_status.recvd_initial_deposition_date 2015-07-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tolbert, W.D.' 1 'Gohain, N.' 2 'Pazgier, M.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Immunity _citation.journal_id_ASTM IUNIEH _citation.journal_id_CSD 2048 _citation.journal_id_ISSN 1097-4180 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Human Enteric alpha-Defensin 5 Promotes Shigella Infection by Enhancing Bacterial Adhesion and Invasion.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.immuni.2018.04.014 _citation.pdbx_database_id_PubMed 29858013 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, D.' 1 ? primary 'Liao, C.' 2 ? primary 'Zhang, B.' 3 ? primary 'Tolbert, W.D.' 4 ? primary 'He, W.' 5 ? primary 'Dai, Z.' 6 ? primary 'Zhang, W.' 7 ? primary 'Yuan, W.' 8 ? primary 'Pazgier, M.' 9 ? primary 'Liu, J.' 10 ? primary 'Yu, J.' 11 ? primary 'Sansonetti, P.J.' 12 ? primary 'Bevins, C.L.' 13 ? primary 'Shao, Y.' 14 ? primary 'Lu, W.' 15 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 111.36 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5CUM _cell.details ? _cell.formula_units_Z ? _cell.length_a 47.603 _cell.length_a_esd ? _cell.length_b 59.966 _cell.length_b_esd ? _cell.length_c 38.272 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CUM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn Defensin-5 3502.132 3 ? Y27A ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 6 ? ? ? ? 4 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 3 ? ? ? ? 5 water nat water 18.015 79 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Defensin,alpha 5,HD5(20-94)' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ATCYCRTGRCATRESLSGVCEISGRLARLCCR _entity_poly.pdbx_seq_one_letter_code_can ATCYCRTGRCATRESLSGVCEISGRLARLCCR _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 CYS n 1 4 TYR n 1 5 CYS n 1 6 ARG n 1 7 THR n 1 8 GLY n 1 9 ARG n 1 10 CYS n 1 11 ALA n 1 12 THR n 1 13 ARG n 1 14 GLU n 1 15 SER n 1 16 LEU n 1 17 SER n 1 18 GLY n 1 19 VAL n 1 20 CYS n 1 21 GLU n 1 22 ILE n 1 23 SER n 1 24 GLY n 1 25 ARG n 1 26 LEU n 1 27 ALA n 1 28 ARG n 1 29 LEU n 1 30 CYS n 1 31 CYS n 1 32 ARG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEF5_HUMAN _struct_ref.pdbx_db_accession Q01523 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ATCYCRTGRCATRESLSGVCEISGRLYRLCCR _struct_ref.pdbx_align_begin 63 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5CUM A 1 ? 32 ? Q01523 63 ? 94 ? 1 32 2 1 5CUM B 1 ? 32 ? Q01523 63 ? 94 ? 1 32 3 1 5CUM C 1 ? 32 ? Q01523 63 ? 94 ? 1 32 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CUM ALA A 27 ? UNP Q01523 TYR 89 'engineered mutation' 27 1 2 5CUM ALA B 27 ? UNP Q01523 TYR 89 'engineered mutation' 27 2 3 5CUM ALA C 27 ? UNP Q01523 TYR 89 'engineered mutation' 27 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CUM _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.429 M sodium chloride, 9.9% isopropanol, 0.1 M calcium chloride, and 0.1 M imidazole pH 6.5' _exptl_crystal_grow.pdbx_pH_range 6.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-23 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.127 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.127 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CUM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.75 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 10121 _reflns.number_obs 10121 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.78 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.704 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5CUM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.752 _refine.ls_d_res_low 35.649 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10119 _refine.ls_number_reflns_R_free 477 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.83 _refine.ls_percent_reflns_R_free 4.68 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1749 _refine.ls_R_factor_R_free 0.2196 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1726 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1ZMP _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.75 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.21 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 714 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 812 _refine_hist.d_res_high 1.752 _refine_hist.d_res_low 35.649 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 732 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.231 ? 960 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.410 ? 276 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.052 ? 111 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 123 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.7518 1.8442 . . 109 2735 100.00 . . . 0.3641 . 0.2599 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8442 1.9597 . . 131 2664 100.00 . . . 0.2446 . 0.2145 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9597 2.1110 . . 97 2769 100.00 . . . 0.2324 . 0.1968 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1110 2.3234 . . 175 2609 100.00 . . . 0.2164 . 0.1599 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3234 2.6595 . . 101 2772 100.00 . . . 0.1832 . 0.1778 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6595 3.3503 . . 191 2617 100.00 . . . 0.2302 . 0.1758 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3503 35.6562 . . 124 2717 100.00 . . . 0.2050 . 0.1497 . . . . . . . . . . # _struct.entry_id 5CUM _struct.title 'Crystal structure of Human Defensin-5 Y27A mutant crystal form 1.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CUM _struct_keywords.text 'PANETH CELLS DEFENSIN, HUMAN ALPHA-DEFENSIN, INTESTINAL DEFENSIN, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 3 ? K N N 4 ? L N N 3 ? M N N 4 ? N N N 5 ? O N N 5 ? P N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 31 SG ? ? A CYS 3 A CYS 31 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf2 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 20 SG ? ? A CYS 5 A CYS 20 1_555 ? ? ? ? ? ? ? 2.012 ? ? disulf3 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 10 A CYS 30 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf4 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 31 SG ? ? B CYS 3 B CYS 31 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf5 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 20 SG ? ? B CYS 5 B CYS 20 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? B CYS 10 SG ? ? ? 1_555 B CYS 30 SG ? ? B CYS 10 B CYS 30 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf7 disulf ? ? C CYS 3 SG ? ? ? 1_555 C CYS 31 SG ? ? C CYS 3 C CYS 31 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf8 disulf ? ? C CYS 5 SG ? ? ? 1_555 C CYS 20 SG ? ? C CYS 5 C CYS 20 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf9 disulf ? ? C CYS 10 SG ? ? ? 1_555 C CYS 30 SG ? ? C CYS 10 C CYS 30 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc1 metalc ? ? A GLU 21 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 21 A CA 101 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc2 metalc ? ? A GLY 24 O ? ? ? 1_555 D CA . CA ? ? A GLY 24 A CA 101 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc3 metalc ? ? D CA . CA ? ? ? 1_555 B GLU 21 OE2 ? ? A CA 101 B GLU 21 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc4 metalc ? ? D CA . CA ? ? ? 1_555 B GLY 24 O ? ? A CA 101 B GLY 24 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc5 metalc ? ? D CA . CA ? ? ? 1_555 C GLU 21 OE2 ? ? A CA 101 C GLU 21 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 C GLY 24 O ? ? A CA 101 C GLY 24 1_555 ? ? ? ? ? ? ? 2.322 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 3 ? ARG A 6 ? CYS A 3 ARG A 6 AA1 2 ARG A 25 ? CYS A 31 ? ARG A 25 CYS A 31 AA1 3 SER A 15 ? ILE A 22 ? SER A 15 ILE A 22 AA2 1 CYS B 3 ? ARG B 6 ? CYS B 3 ARG B 6 AA2 2 ARG B 25 ? CYS B 31 ? ARG B 25 CYS B 31 AA2 3 SER B 15 ? ILE B 22 ? SER B 15 ILE B 22 AA3 1 CYS C 3 ? ARG C 6 ? CYS C 3 ARG C 6 AA3 2 ARG C 25 ? CYS C 31 ? ARG C 25 CYS C 31 AA3 3 SER C 15 ? ILE C 22 ? SER C 15 ILE C 22 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 4 ? N TYR A 4 O CYS A 30 ? O CYS A 30 AA1 2 3 O LEU A 29 ? O LEU A 29 N SER A 17 ? N SER A 17 AA2 1 2 N TYR B 4 ? N TYR B 4 O CYS B 30 ? O CYS B 30 AA2 2 3 O LEU B 29 ? O LEU B 29 N SER B 17 ? N SER B 17 AA3 1 2 N TYR C 4 ? N TYR C 4 O CYS C 30 ? O CYS C 30 AA3 2 3 O LEU C 29 ? O LEU C 29 N SER C 17 ? N SER C 17 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 101 ? 6 'binding site for residue CA A 101' AC2 Software A CL 102 ? 2 'binding site for residue CL A 102' AC3 Software A CL 104 ? 1 'binding site for residue CL A 104' AC4 Software A CL 105 ? 2 'binding site for residue CL A 105' AC5 Software A IPA 106 ? 3 'binding site for residue IPA A 106' AC6 Software B CL 101 ? 2 'binding site for residue CL B 101' AC7 Software B IPA 102 ? 2 'binding site for residue IPA B 102' AC8 Software C CL 101 ? 2 'binding site for residue CL C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 21 ? GLU A 21 . ? 1_555 ? 2 AC1 6 GLY A 24 ? GLY A 24 . ? 1_555 ? 3 AC1 6 GLU B 21 ? GLU B 21 . ? 1_555 ? 4 AC1 6 GLY B 24 ? GLY B 24 . ? 1_555 ? 5 AC1 6 GLU C 21 ? GLU C 21 . ? 1_555 ? 6 AC1 6 GLY C 24 ? GLY C 24 . ? 1_555 ? 7 AC2 2 ARG A 6 ? ARG A 6 . ? 1_555 ? 8 AC2 2 THR A 7 ? THR A 7 . ? 1_555 ? 9 AC3 1 CYS A 10 ? CYS A 10 . ? 1_555 ? 10 AC4 2 ARG A 9 ? ARG A 9 . ? 1_555 ? 11 AC4 2 ARG A 28 ? ARG A 28 . ? 1_555 ? 12 AC5 3 CYS A 3 ? CYS A 3 . ? 1_555 ? 13 AC5 3 CYS A 5 ? CYS A 5 . ? 1_555 ? 14 AC5 3 HOH N . ? HOH A 217 . ? 1_555 ? 15 AC6 2 CYS B 10 ? CYS B 10 . ? 1_555 ? 16 AC6 2 HOH O . ? HOH B 208 . ? 1_555 ? 17 AC7 2 CYS B 5 ? CYS B 5 . ? 1_555 ? 18 AC7 2 HOH O . ? HOH B 216 . ? 1_555 ? 19 AC8 2 ARG C 6 ? ARG C 6 . ? 1_555 ? 20 AC8 2 THR C 7 ? THR C 7 . ? 1_555 ? # _atom_sites.entry_id 5CUM _atom_sites.fract_transf_matrix[1][1] 0.021007 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008215 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016676 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028056 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 ARG 32 32 32 ARG ARG A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 THR 2 2 2 THR THR B . n B 1 3 CYS 3 3 3 CYS CYS B . n B 1 4 TYR 4 4 4 TYR TYR B . n B 1 5 CYS 5 5 5 CYS CYS B . n B 1 6 ARG 6 6 6 ARG ARG B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 ARG 9 9 9 ARG ARG B . n B 1 10 CYS 10 10 10 CYS CYS B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 CYS 20 20 20 CYS CYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ILE 22 22 22 ILE ILE B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 ARG 28 28 28 ARG ARG B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 CYS 30 30 30 CYS CYS B . n B 1 31 CYS 31 31 31 CYS CYS B . n B 1 32 ARG 32 32 32 ARG ARG B . n C 1 1 ALA 1 1 1 ALA ALA C . n C 1 2 THR 2 2 2 THR THR C . n C 1 3 CYS 3 3 3 CYS CYS C . n C 1 4 TYR 4 4 4 TYR TYR C . n C 1 5 CYS 5 5 5 CYS CYS C . n C 1 6 ARG 6 6 6 ARG ARG C . n C 1 7 THR 7 7 7 THR THR C . n C 1 8 GLY 8 8 8 GLY GLY C . n C 1 9 ARG 9 9 9 ARG ARG C . n C 1 10 CYS 10 10 10 CYS CYS C . n C 1 11 ALA 11 11 11 ALA ALA C . n C 1 12 THR 12 12 12 THR THR C . n C 1 13 ARG 13 13 13 ARG ARG C . n C 1 14 GLU 14 14 14 GLU GLU C . n C 1 15 SER 15 15 15 SER SER C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 SER 17 17 17 SER SER C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 VAL 19 19 19 VAL VAL C . n C 1 20 CYS 20 20 20 CYS CYS C . n C 1 21 GLU 21 21 21 GLU GLU C . n C 1 22 ILE 22 22 22 ILE ILE C . n C 1 23 SER 23 23 23 SER SER C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 LEU 26 26 26 LEU LEU C . n C 1 27 ALA 27 27 27 ALA ALA C . n C 1 28 ARG 28 28 28 ARG ARG C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 CYS 30 30 30 CYS CYS C . n C 1 31 CYS 31 31 31 CYS CYS C . n C 1 32 ARG 32 32 32 ARG ARG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CA 1 101 1 CA CA A . E 3 CL 1 102 1 CL CL A . F 3 CL 1 103 3 CL CL A . G 3 CL 1 104 5 CL CL A . H 3 CL 1 105 6 CL CL A . I 4 IPA 1 106 2 IPA IPA A . J 3 CL 1 101 4 CL CL B . K 4 IPA 1 102 3 IPA IPA B . L 3 CL 1 101 2 CL CL C . M 4 IPA 1 102 1 IPA IPA C . N 5 HOH 1 201 59 HOH HOH A . N 5 HOH 2 202 66 HOH HOH A . N 5 HOH 3 203 70 HOH HOH A . N 5 HOH 4 204 1 HOH HOH A . N 5 HOH 5 205 17 HOH HOH A . N 5 HOH 6 206 74 HOH HOH A . N 5 HOH 7 207 34 HOH HOH A . N 5 HOH 8 208 9 HOH HOH A . N 5 HOH 9 209 23 HOH HOH A . N 5 HOH 10 210 45 HOH HOH A . N 5 HOH 11 211 67 HOH HOH A . N 5 HOH 12 212 53 HOH HOH A . N 5 HOH 13 213 8 HOH HOH A . N 5 HOH 14 214 33 HOH HOH A . N 5 HOH 15 215 43 HOH HOH A . N 5 HOH 16 216 76 HOH HOH A . N 5 HOH 17 217 48 HOH HOH A . N 5 HOH 18 218 68 HOH HOH A . N 5 HOH 19 219 30 HOH HOH A . N 5 HOH 20 220 77 HOH HOH A . N 5 HOH 21 221 49 HOH HOH A . N 5 HOH 22 222 61 HOH HOH A . N 5 HOH 23 223 26 HOH HOH A . N 5 HOH 24 224 11 HOH HOH A . N 5 HOH 25 225 44 HOH HOH A . N 5 HOH 26 226 13 HOH HOH A . N 5 HOH 27 227 41 HOH HOH A . O 5 HOH 1 201 40 HOH HOH B . O 5 HOH 2 202 3 HOH HOH B . O 5 HOH 3 203 65 HOH HOH B . O 5 HOH 4 204 29 HOH HOH B . O 5 HOH 5 205 54 HOH HOH B . O 5 HOH 6 206 32 HOH HOH B . O 5 HOH 7 207 16 HOH HOH B . O 5 HOH 8 208 5 HOH HOH B . O 5 HOH 9 209 7 HOH HOH B . O 5 HOH 10 210 25 HOH HOH B . O 5 HOH 11 211 20 HOH HOH B . O 5 HOH 12 212 24 HOH HOH B . O 5 HOH 13 213 10 HOH HOH B . O 5 HOH 14 214 19 HOH HOH B . O 5 HOH 15 215 60 HOH HOH B . O 5 HOH 16 216 4 HOH HOH B . O 5 HOH 17 217 18 HOH HOH B . O 5 HOH 18 218 71 HOH HOH B . O 5 HOH 19 219 79 HOH HOH B . O 5 HOH 20 220 72 HOH HOH B . O 5 HOH 21 221 12 HOH HOH B . O 5 HOH 22 222 37 HOH HOH B . O 5 HOH 23 223 47 HOH HOH B . O 5 HOH 24 224 22 HOH HOH B . P 5 HOH 1 201 78 HOH HOH C . P 5 HOH 2 202 27 HOH HOH C . P 5 HOH 3 203 2 HOH HOH C . P 5 HOH 4 204 15 HOH HOH C . P 5 HOH 5 205 75 HOH HOH C . P 5 HOH 6 206 21 HOH HOH C . P 5 HOH 7 207 56 HOH HOH C . P 5 HOH 8 208 6 HOH HOH C . P 5 HOH 9 209 31 HOH HOH C . P 5 HOH 10 210 69 HOH HOH C . P 5 HOH 11 211 35 HOH HOH C . P 5 HOH 12 212 14 HOH HOH C . P 5 HOH 13 213 39 HOH HOH C . P 5 HOH 14 214 36 HOH HOH C . P 5 HOH 15 215 63 HOH HOH C . P 5 HOH 16 216 57 HOH HOH C . P 5 HOH 17 217 64 HOH HOH C . P 5 HOH 18 218 28 HOH HOH C . P 5 HOH 19 219 73 HOH HOH C . P 5 HOH 20 220 50 HOH HOH C . P 5 HOH 21 221 58 HOH HOH C . P 5 HOH 22 222 55 HOH HOH C . P 5 HOH 23 223 38 HOH HOH C . P 5 HOH 24 224 52 HOH HOH C . P 5 HOH 25 225 62 HOH HOH C . P 5 HOH 26 226 51 HOH HOH C . P 5 HOH 27 227 46 HOH HOH C . P 5 HOH 28 228 42 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2260 ? 1 MORE -61 ? 1 'SSA (A^2)' 7130 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CL 102 ? E CL . 2 1 A CL 103 ? F CL . 3 1 B HOH 208 ? O HOH . 4 1 B HOH 223 ? O HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 21 ? A GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? A GLY 24 ? A GLY 24 ? 1_555 86.5 ? 2 OE2 ? A GLU 21 ? A GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 OE2 ? B GLU 21 ? B GLU 21 ? 1_555 98.1 ? 3 O ? A GLY 24 ? A GLY 24 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 OE2 ? B GLU 21 ? B GLU 21 ? 1_555 167.7 ? 4 OE2 ? A GLU 21 ? A GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? B GLY 24 ? B GLY 24 ? 1_555 92.4 ? 5 O ? A GLY 24 ? A GLY 24 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? B GLY 24 ? B GLY 24 ? 1_555 82.4 ? 6 OE2 ? B GLU 21 ? B GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? B GLY 24 ? B GLY 24 ? 1_555 85.9 ? 7 OE2 ? A GLU 21 ? A GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 OE2 ? C GLU 21 ? C GLU 21 ? 1_555 98.8 ? 8 O ? A GLY 24 ? A GLY 24 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 OE2 ? C GLU 21 ? C GLU 21 ? 1_555 91.0 ? 9 OE2 ? B GLU 21 ? B GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 OE2 ? C GLU 21 ? C GLU 21 ? 1_555 99.5 ? 10 O ? B GLY 24 ? B GLY 24 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 OE2 ? C GLU 21 ? C GLU 21 ? 1_555 166.7 ? 11 OE2 ? A GLU 21 ? A GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? C GLY 24 ? C GLY 24 ? 1_555 169.4 ? 12 O ? A GLY 24 ? A GLY 24 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? C GLY 24 ? C GLY 24 ? 1_555 83.0 ? 13 OE2 ? B GLU 21 ? B GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? C GLY 24 ? C GLY 24 ? 1_555 92.0 ? 14 O ? B GLY 24 ? B GLY 24 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? C GLY 24 ? C GLY 24 ? 1_555 84.9 ? 15 OE2 ? C GLU 21 ? C GLU 21 ? 1_555 CA ? D CA . ? A CA 101 ? 1_555 O ? C GLY 24 ? C GLY 24 ? 1_555 82.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-07-27 2 'Structure model' 1 1 2018-06-13 3 'Structure model' 1 2 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_struct_oper_list 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_initial_refinement_model 8 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' 13 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 15 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 113.4700 -21.9933 24.0931 0.1954 ? -0.0316 ? 0.0158 ? 0.3128 ? -0.0111 ? 0.1042 ? 9.2443 ? -1.9879 ? -1.3097 ? 9.1699 ? 0.5856 ? 8.4428 ? 0.0353 ? 0.4687 ? -0.0291 ? -0.2632 ? 0.0968 ? -0.3528 ? -0.0176 ? 0.9593 ? -0.1255 ? 2 'X-RAY DIFFRACTION' ? refined 98.0104 -10.1826 38.6698 0.2180 ? 0.0954 ? -0.0460 ? 0.2028 ? -0.0162 ? 0.2363 ? 8.3875 ? -0.4177 ? 0.8314 ? 8.8357 ? 0.7194 ? 6.0199 ? -0.4349 ? -0.3149 ? 0.6298 ? 0.3689 ? 0.1958 ? -0.0538 ? -0.6673 ? -0.3796 ? 0.2521 ? 3 'X-RAY DIFFRACTION' ? refined 98.2783 -34.5809 38.4342 0.1860 ? -0.0705 ? -0.0601 ? 0.1674 ? 0.0195 ? 0.2811 ? 7.3679 ? 2.2402 ? -0.7684 ? 9.5535 ? -1.7298 ? 9.2290 ? 0.3466 ? -0.4753 ? -0.7060 ? 0.2698 ? -0.1274 ? 0.0602 ? 0.4753 ? -0.2897 ? -0.2274 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;(chain 'A' and resid 1 through 32) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;(chain 'B' and resid 1 through 32) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ;(chain 'C' and resid 1 through 32) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8 2 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 225 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 226 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 203 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 211 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_1056 _pdbx_validate_symm_contact.dist 2.19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 CA CA CA N N 41 CL CL CL N N 42 CYS N N N N 43 CYS CA C N R 44 CYS C C N N 45 CYS O O N N 46 CYS CB C N N 47 CYS SG S N N 48 CYS OXT O N N 49 CYS H H N N 50 CYS H2 H N N 51 CYS HA H N N 52 CYS HB2 H N N 53 CYS HB3 H N N 54 CYS HG H N N 55 CYS HXT H N N 56 GLU N N N N 57 GLU CA C N S 58 GLU C C N N 59 GLU O O N N 60 GLU CB C N N 61 GLU CG C N N 62 GLU CD C N N 63 GLU OE1 O N N 64 GLU OE2 O N N 65 GLU OXT O N N 66 GLU H H N N 67 GLU H2 H N N 68 GLU HA H N N 69 GLU HB2 H N N 70 GLU HB3 H N N 71 GLU HG2 H N N 72 GLU HG3 H N N 73 GLU HE2 H N N 74 GLU HXT H N N 75 GLY N N N N 76 GLY CA C N N 77 GLY C C N N 78 GLY O O N N 79 GLY OXT O N N 80 GLY H H N N 81 GLY H2 H N N 82 GLY HA2 H N N 83 GLY HA3 H N N 84 GLY HXT H N N 85 HOH O O N N 86 HOH H1 H N N 87 HOH H2 H N N 88 ILE N N N N 89 ILE CA C N S 90 ILE C C N N 91 ILE O O N N 92 ILE CB C N S 93 ILE CG1 C N N 94 ILE CG2 C N N 95 ILE CD1 C N N 96 ILE OXT O N N 97 ILE H H N N 98 ILE H2 H N N 99 ILE HA H N N 100 ILE HB H N N 101 ILE HG12 H N N 102 ILE HG13 H N N 103 ILE HG21 H N N 104 ILE HG22 H N N 105 ILE HG23 H N N 106 ILE HD11 H N N 107 ILE HD12 H N N 108 ILE HD13 H N N 109 ILE HXT H N N 110 IPA C1 C N N 111 IPA C2 C N N 112 IPA C3 C N N 113 IPA O2 O N N 114 IPA H11 H N N 115 IPA H12 H N N 116 IPA H13 H N N 117 IPA H2 H N N 118 IPA H31 H N N 119 IPA H32 H N N 120 IPA H33 H N N 121 IPA HO2 H N N 122 LEU N N N N 123 LEU CA C N S 124 LEU C C N N 125 LEU O O N N 126 LEU CB C N N 127 LEU CG C N N 128 LEU CD1 C N N 129 LEU CD2 C N N 130 LEU OXT O N N 131 LEU H H N N 132 LEU H2 H N N 133 LEU HA H N N 134 LEU HB2 H N N 135 LEU HB3 H N N 136 LEU HG H N N 137 LEU HD11 H N N 138 LEU HD12 H N N 139 LEU HD13 H N N 140 LEU HD21 H N N 141 LEU HD22 H N N 142 LEU HD23 H N N 143 LEU HXT H N N 144 SER N N N N 145 SER CA C N S 146 SER C C N N 147 SER O O N N 148 SER CB C N N 149 SER OG O N N 150 SER OXT O N N 151 SER H H N N 152 SER H2 H N N 153 SER HA H N N 154 SER HB2 H N N 155 SER HB3 H N N 156 SER HG H N N 157 SER HXT H N N 158 THR N N N N 159 THR CA C N S 160 THR C C N N 161 THR O O N N 162 THR CB C N R 163 THR OG1 O N N 164 THR CG2 C N N 165 THR OXT O N N 166 THR H H N N 167 THR H2 H N N 168 THR HA H N N 169 THR HB H N N 170 THR HG1 H N N 171 THR HG21 H N N 172 THR HG22 H N N 173 THR HG23 H N N 174 THR HXT H N N 175 TYR N N N N 176 TYR CA C N S 177 TYR C C N N 178 TYR O O N N 179 TYR CB C N N 180 TYR CG C Y N 181 TYR CD1 C Y N 182 TYR CD2 C Y N 183 TYR CE1 C Y N 184 TYR CE2 C Y N 185 TYR CZ C Y N 186 TYR OH O N N 187 TYR OXT O N N 188 TYR H H N N 189 TYR H2 H N N 190 TYR HA H N N 191 TYR HB2 H N N 192 TYR HB3 H N N 193 TYR HD1 H N N 194 TYR HD2 H N N 195 TYR HE1 H N N 196 TYR HE2 H N N 197 TYR HH H N N 198 TYR HXT H N N 199 VAL N N N N 200 VAL CA C N S 201 VAL C C N N 202 VAL O O N N 203 VAL CB C N N 204 VAL CG1 C N N 205 VAL CG2 C N N 206 VAL OXT O N N 207 VAL H H N N 208 VAL H2 H N N 209 VAL HA H N N 210 VAL HB H N N 211 VAL HG11 H N N 212 VAL HG12 H N N 213 VAL HG13 H N N 214 VAL HG21 H N N 215 VAL HG22 H N N 216 VAL HG23 H N N 217 VAL HXT H N N 218 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 CYS N CA sing N N 39 CYS N H sing N N 40 CYS N H2 sing N N 41 CYS CA C sing N N 42 CYS CA CB sing N N 43 CYS CA HA sing N N 44 CYS C O doub N N 45 CYS C OXT sing N N 46 CYS CB SG sing N N 47 CYS CB HB2 sing N N 48 CYS CB HB3 sing N N 49 CYS SG HG sing N N 50 CYS OXT HXT sing N N 51 GLU N CA sing N N 52 GLU N H sing N N 53 GLU N H2 sing N N 54 GLU CA C sing N N 55 GLU CA CB sing N N 56 GLU CA HA sing N N 57 GLU C O doub N N 58 GLU C OXT sing N N 59 GLU CB CG sing N N 60 GLU CB HB2 sing N N 61 GLU CB HB3 sing N N 62 GLU CG CD sing N N 63 GLU CG HG2 sing N N 64 GLU CG HG3 sing N N 65 GLU CD OE1 doub N N 66 GLU CD OE2 sing N N 67 GLU OE2 HE2 sing N N 68 GLU OXT HXT sing N N 69 GLY N CA sing N N 70 GLY N H sing N N 71 GLY N H2 sing N N 72 GLY CA C sing N N 73 GLY CA HA2 sing N N 74 GLY CA HA3 sing N N 75 GLY C O doub N N 76 GLY C OXT sing N N 77 GLY OXT HXT sing N N 78 HOH O H1 sing N N 79 HOH O H2 sing N N 80 ILE N CA sing N N 81 ILE N H sing N N 82 ILE N H2 sing N N 83 ILE CA C sing N N 84 ILE CA CB sing N N 85 ILE CA HA sing N N 86 ILE C O doub N N 87 ILE C OXT sing N N 88 ILE CB CG1 sing N N 89 ILE CB CG2 sing N N 90 ILE CB HB sing N N 91 ILE CG1 CD1 sing N N 92 ILE CG1 HG12 sing N N 93 ILE CG1 HG13 sing N N 94 ILE CG2 HG21 sing N N 95 ILE CG2 HG22 sing N N 96 ILE CG2 HG23 sing N N 97 ILE CD1 HD11 sing N N 98 ILE CD1 HD12 sing N N 99 ILE CD1 HD13 sing N N 100 ILE OXT HXT sing N N 101 IPA C1 C2 sing N N 102 IPA C1 H11 sing N N 103 IPA C1 H12 sing N N 104 IPA C1 H13 sing N N 105 IPA C2 C3 sing N N 106 IPA C2 O2 sing N N 107 IPA C2 H2 sing N N 108 IPA C3 H31 sing N N 109 IPA C3 H32 sing N N 110 IPA C3 H33 sing N N 111 IPA O2 HO2 sing N N 112 LEU N CA sing N N 113 LEU N H sing N N 114 LEU N H2 sing N N 115 LEU CA C sing N N 116 LEU CA CB sing N N 117 LEU CA HA sing N N 118 LEU C O doub N N 119 LEU C OXT sing N N 120 LEU CB CG sing N N 121 LEU CB HB2 sing N N 122 LEU CB HB3 sing N N 123 LEU CG CD1 sing N N 124 LEU CG CD2 sing N N 125 LEU CG HG sing N N 126 LEU CD1 HD11 sing N N 127 LEU CD1 HD12 sing N N 128 LEU CD1 HD13 sing N N 129 LEU CD2 HD21 sing N N 130 LEU CD2 HD22 sing N N 131 LEU CD2 HD23 sing N N 132 LEU OXT HXT sing N N 133 SER N CA sing N N 134 SER N H sing N N 135 SER N H2 sing N N 136 SER CA C sing N N 137 SER CA CB sing N N 138 SER CA HA sing N N 139 SER C O doub N N 140 SER C OXT sing N N 141 SER CB OG sing N N 142 SER CB HB2 sing N N 143 SER CB HB3 sing N N 144 SER OG HG sing N N 145 SER OXT HXT sing N N 146 THR N CA sing N N 147 THR N H sing N N 148 THR N H2 sing N N 149 THR CA C sing N N 150 THR CA CB sing N N 151 THR CA HA sing N N 152 THR C O doub N N 153 THR C OXT sing N N 154 THR CB OG1 sing N N 155 THR CB CG2 sing N N 156 THR CB HB sing N N 157 THR OG1 HG1 sing N N 158 THR CG2 HG21 sing N N 159 THR CG2 HG22 sing N N 160 THR CG2 HG23 sing N N 161 THR OXT HXT sing N N 162 TYR N CA sing N N 163 TYR N H sing N N 164 TYR N H2 sing N N 165 TYR CA C sing N N 166 TYR CA CB sing N N 167 TYR CA HA sing N N 168 TYR C O doub N N 169 TYR C OXT sing N N 170 TYR CB CG sing N N 171 TYR CB HB2 sing N N 172 TYR CB HB3 sing N N 173 TYR CG CD1 doub Y N 174 TYR CG CD2 sing Y N 175 TYR CD1 CE1 sing Y N 176 TYR CD1 HD1 sing N N 177 TYR CD2 CE2 doub Y N 178 TYR CD2 HD2 sing N N 179 TYR CE1 CZ doub Y N 180 TYR CE1 HE1 sing N N 181 TYR CE2 CZ sing Y N 182 TYR CE2 HE2 sing N N 183 TYR CZ OH sing N N 184 TYR OH HH sing N N 185 TYR OXT HXT sing N N 186 VAL N CA sing N N 187 VAL N H sing N N 188 VAL N H2 sing N N 189 VAL CA C sing N N 190 VAL CA CB sing N N 191 VAL CA HA sing N N 192 VAL C O doub N N 193 VAL C OXT sing N N 194 VAL CB CG1 sing N N 195 VAL CB CG2 sing N N 196 VAL CB HB sing N N 197 VAL CG1 HG11 sing N N 198 VAL CG1 HG12 sing N N 199 VAL CG1 HG13 sing N N 200 VAL CG2 HG21 sing N N 201 VAL CG2 HG22 sing N N 202 VAL CG2 HG23 sing N N 203 VAL OXT HXT sing N N 204 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'CHLORIDE ION' CL 4 'ISOPROPYL ALCOHOL' IPA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZMP _pdbx_initial_refinement_model.details ? #