HEADER TRANSFERASE 29-JUL-15 5CXS TITLE CRYSTAL STRUCTURE OF ISOFORM 2 OF PURINE NUCLEOSIDE PHOSPHORYLASE TITLE 2 COMPLEXED WITH MES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PURINE NUCLEOSIDE PHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INOSINE-GUANOSINE PHOSPHORYLASE; COMPND 5 EC: 2.4.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_COMMON: BLOOD FLUKE; SOURCE 4 ORGANISM_TAXID: 6183; SOURCE 5 GENE: SMP_179110; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: LEMO; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POPINS3C KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.R.TORINI,L.ROMANELLO,L.BIRD,R.OWENS,J.BRANDAO-NETO,H.M.PEREIRA REVDAT 5 27-SEP-23 5CXS 1 REMARK REVDAT 4 01-JAN-20 5CXS 1 REMARK REVDAT 3 17-APR-19 5CXS 1 REMARK REVDAT 2 26-SEP-18 5CXS 1 JRNL REMARK REVDAT 1 03-AUG-16 5CXS 0 JRNL AUTH J.R.TORINI,L.ROMANELLO,F.A.H.BATISTA,V.H.B.SERRAO,M.FAHEEM, JRNL AUTH 2 A.E.ZERAIK,L.BIRD,J.NETTLESHIP,Y.REDDIVARI,R.OWENS, JRNL AUTH 3 R.DEMARCO,J.C.BORGES,J.BRANDAO-NETO,H.D.PEREIRA JRNL TITL THE MOLECULAR STRUCTURE OF SCHISTOSOMA MANSONI PNP ISOFORM 2 JRNL TITL 2 PROVIDES INSIGHTS INTO THE NUCLEOSIDE SELECTIVITY OF PNPS. JRNL REF PLOS ONE V. 13 03532 2018 JRNL REFN ESSN 1932-6203 JRNL PMID 30192840 JRNL DOI 10.1371/JOURNAL.PONE.0203532 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.4641 - 3.8880 1.00 2894 124 0.1370 0.1591 REMARK 3 2 3.8880 - 3.0880 1.00 2758 159 0.1431 0.1846 REMARK 3 3 3.0880 - 2.6982 1.00 2761 137 0.1454 0.1732 REMARK 3 4 2.6982 - 2.4517 1.00 2725 141 0.1541 0.2134 REMARK 3 5 2.4517 - 2.2761 1.00 2686 170 0.1498 0.1938 REMARK 3 6 2.2761 - 2.1420 1.00 2726 159 0.1470 0.1970 REMARK 3 7 2.1420 - 2.0348 1.00 2708 137 0.1506 0.1865 REMARK 3 8 2.0348 - 1.9463 1.00 2729 134 0.1537 0.1888 REMARK 3 9 1.9463 - 1.8714 1.00 2700 153 0.1692 0.2245 REMARK 3 10 1.8714 - 1.8068 1.00 2695 139 0.1802 0.2608 REMARK 3 11 1.8068 - 1.7503 1.00 2701 145 0.2116 0.2620 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2222 REMARK 3 ANGLE : 1.694 3013 REMARK 3 CHIRALITY : 0.104 351 REMARK 3 PLANARITY : 0.009 389 REMARK 3 DIHEDRAL : 14.363 834 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4650 -37.6543 -3.4545 REMARK 3 T TENSOR REMARK 3 T11: 0.1291 T22: 0.2030 REMARK 3 T33: 0.1963 T12: -0.0289 REMARK 3 T13: 0.0517 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 5.7484 L22: 7.7171 REMARK 3 L33: 4.2306 L12: -3.9478 REMARK 3 L13: 1.3132 L23: -0.2730 REMARK 3 S TENSOR REMARK 3 S11: 0.1537 S12: 0.2238 S13: -0.5142 REMARK 3 S21: -0.1812 S22: -0.0596 S23: 0.4910 REMARK 3 S31: 0.2596 S32: -0.4472 S33: -0.0593 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4887 -40.4652 6.0847 REMARK 3 T TENSOR REMARK 3 T11: 0.2426 T22: 0.2168 REMARK 3 T33: 0.2544 T12: 0.0376 REMARK 3 T13: -0.0460 T23: 0.0686 REMARK 3 L TENSOR REMARK 3 L11: 4.7062 L22: 4.6285 REMARK 3 L33: 2.2173 L12: 1.9879 REMARK 3 L13: -1.5785 L23: -1.0544 REMARK 3 S TENSOR REMARK 3 S11: 0.0980 S12: -0.3192 S13: -0.8992 REMARK 3 S21: 0.1536 S22: -0.0748 S23: -0.3286 REMARK 3 S31: 0.4501 S32: 0.1888 S33: -0.0054 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8396 -40.5627 -2.5114 REMARK 3 T TENSOR REMARK 3 T11: 0.1978 T22: 0.1137 REMARK 3 T33: 0.2563 T12: 0.0172 REMARK 3 T13: 0.0465 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 2.7157 L22: 1.8352 REMARK 3 L33: 1.7770 L12: 0.0411 REMARK 3 L13: 0.8600 L23: 1.1345 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: 0.0662 S13: -0.3733 REMARK 3 S21: -0.0746 S22: 0.0571 S23: -0.1562 REMARK 3 S31: 0.2500 S32: 0.1490 S33: -0.1081 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6138 -29.3367 -5.4143 REMARK 3 T TENSOR REMARK 3 T11: 0.1411 T22: 0.0940 REMARK 3 T33: 0.1627 T12: 0.0115 REMARK 3 T13: 0.0271 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.8997 L22: 0.9682 REMARK 3 L33: 2.7004 L12: 1.5265 REMARK 3 L13: -2.1724 L23: -1.5010 REMARK 3 S TENSOR REMARK 3 S11: 0.0554 S12: 0.0184 S13: -0.1470 REMARK 3 S21: 0.0298 S22: -0.0563 S23: -0.0903 REMARK 3 S31: -0.0129 S32: 0.0373 S33: 0.0019 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4059 -19.7295 2.4139 REMARK 3 T TENSOR REMARK 3 T11: 0.1156 T22: 0.0789 REMARK 3 T33: 0.0515 T12: 0.0152 REMARK 3 T13: 0.0232 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 2.1156 L22: 1.0259 REMARK 3 L33: 1.1320 L12: -0.3562 REMARK 3 L13: 0.3806 L23: -0.2921 REMARK 3 S TENSOR REMARK 3 S11: -0.0659 S12: -0.1712 S13: -0.0084 REMARK 3 S21: 0.1481 S22: 0.0410 S23: 0.0175 REMARK 3 S31: -0.0592 S32: 0.0525 S33: 0.0182 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 170 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9247 -25.1498 19.1032 REMARK 3 T TENSOR REMARK 3 T11: 0.2793 T22: 0.2893 REMARK 3 T33: 0.1106 T12: -0.0240 REMARK 3 T13: -0.0068 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 2.8157 L22: 3.7479 REMARK 3 L33: 6.2489 L12: -0.7532 REMARK 3 L13: 1.8290 L23: -1.0589 REMARK 3 S TENSOR REMARK 3 S11: -0.1173 S12: -0.8029 S13: -0.0764 REMARK 3 S21: 0.7140 S22: 0.0857 S23: -0.0524 REMARK 3 S31: -0.1188 S32: -0.1786 S33: -0.0050 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9606 -18.8954 1.2550 REMARK 3 T TENSOR REMARK 3 T11: 0.1198 T22: 0.1060 REMARK 3 T33: 0.0826 T12: 0.0276 REMARK 3 T13: -0.0060 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.0655 L22: 1.0299 REMARK 3 L33: 1.0866 L12: 0.1885 REMARK 3 L13: -0.0427 L23: -0.3900 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: -0.0692 S13: 0.0129 REMARK 3 S21: 0.1543 S22: -0.0162 S23: -0.0817 REMARK 3 S31: -0.0452 S32: 0.1311 S33: 0.0197 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9041 -20.4371 -0.6158 REMARK 3 T TENSOR REMARK 3 T11: 0.1346 T22: 0.1907 REMARK 3 T33: 0.0999 T12: 0.0516 REMARK 3 T13: -0.0015 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 6.8259 L22: 2.9282 REMARK 3 L33: 2.1110 L12: 2.6222 REMARK 3 L13: -1.8538 L23: -1.8752 REMARK 3 S TENSOR REMARK 3 S11: -0.0906 S12: 0.2111 S13: -0.1091 REMARK 3 S21: -0.1397 S22: -0.1388 S23: -0.3644 REMARK 3 S31: 0.1128 S32: 0.2186 S33: 0.2176 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7423 -33.7212 8.9821 REMARK 3 T TENSOR REMARK 3 T11: 0.2512 T22: 0.1799 REMARK 3 T33: 0.1507 T12: 0.0789 REMARK 3 T13: -0.0726 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 5.9225 L22: 2.7002 REMARK 3 L33: 6.8461 L12: 0.9122 REMARK 3 L13: -4.0196 L23: -0.7671 REMARK 3 S TENSOR REMARK 3 S11: 0.0676 S12: -0.0092 S13: -0.3945 REMARK 3 S21: -0.1110 S22: -0.1102 S23: -0.0068 REMARK 3 S31: 0.2108 S32: -0.0210 S33: 0.0598 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CXS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32239 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 43.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : 0.72300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3FAZ REMARK 200 REMARK 200 REMARK: CUBIC FORM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 4000, 20% GLYCEROL, 30MM REMARK 280 DIETHYLENEGLYCOL 30MM TETRAETHYLENEGLYCOL, 30MM REMARK 280 PENTAETHYLENEGLYCOL, 100MM MES/IMIDAZOL PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.92350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.92350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.92350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.92350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.92350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.92350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 48.92350 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 48.92350 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 48.92350 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 48.92350 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 48.92350 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 48.92350 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 48.92350 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 48.92350 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 48.92350 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 48.92350 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 48.92350 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 48.92350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 554 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 607 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 589 O HOH A 595 2.13 REMARK 500 O GLU A 46 O HOH A 401 2.14 REMARK 500 O HOH A 487 O HOH A 540 2.14 REMARK 500 O HOH A 547 O HOH A 573 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 584 O HOH A 585 4545 2.04 REMARK 500 O HOH A 569 O HOH A 587 4445 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 66 174.10 65.31 REMARK 500 THR A 223 -52.34 77.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CXQ RELATED DB: PDB REMARK 900 APO FORM DBREF 5CXS A 14 287 UNP G4VP83 G4VP83_SCHMA 1 274 SEQADV 5CXS MET A 1 UNP G4VP83 INITIATING METHIONINE SEQADV 5CXS THR A 2 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS THR A 3 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS PRO A 4 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS VAL A 5 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS VAL A 6 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS ALA A 7 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS ASN A 8 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS TYR A 9 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS GLU A 10 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS ASN A 11 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS ALA A 12 UNP G4VP83 EXPRESSION TAG SEQADV 5CXS SER A 13 UNP G4VP83 EXPRESSION TAG SEQRES 1 A 287 MET THR THR PRO VAL VAL ALA ASN TYR GLU ASN ALA SER SEQRES 2 A 287 MET ALA ALA ASP TYR ILE LYS ARG VAL SER ASN VAL LEU SEQRES 3 A 287 PRO ASP ILE GLY ILE ILE CYS GLY SER GLY LEU GLY LYS SEQRES 4 A 287 LEU ILE GLU GLU ILE GLU GLU ARG LYS VAL ILE PRO TYR SEQRES 5 A 287 ILE ASN ILE PRO ASN PHE PRO LYS THR THR VAL ALA GLY SEQRES 6 A 287 HIS VAL GLY ASN LEU VAL LEU GLY SER VAL GLY GLY ARG SEQRES 7 A 287 LYS ILE VAL ALA MET GLN GLY ARG LEU HIS MET TYR GLU SEQRES 8 A 287 GLY TYR SER ASN GLN GLU ILE ALA LEU PRO ILE ARG VAL SEQRES 9 A 287 MET LYS LEU LEU GLY VAL ARG VAL LEU LEU ILE THR ASN SEQRES 10 A 287 LEU ALA GLY GLY ILE ASN ARG LYS LEU LYS SER GLY ASP SEQRES 11 A 287 PHE VAL LEU ILE LYS GLY HIS ILE ASN PHE PRO GLY LEU SEQRES 12 A 287 GLY LEU ASN ASN VAL LEU VAL GLY PRO ASN GLN ASP GLU SEQRES 13 A 287 PHE GLY PRO ARG PHE PRO ASP LEU SER ASN ALA TYR ASP SEQRES 14 A 287 ARG LEU LEU GLN GLN LEU ALA LEU LYS ILE ALA GLN GLU SEQRES 15 A 287 ASN ASP PHE GLN ASP LEU VAL HIS GLU GLY VAL TYR ALA SEQRES 16 A 287 PHE ASN GLY GLY PRO THR TYR GLU SER PRO ASP GLU SER SEQRES 17 A 287 ASN MET LEU LEU LYS LEU GLY CYS ASP VAL VAL GLY MET SEQRES 18 A 287 SER THR VAL PRO GLU VAL ILE ILE ALA CYS HIS CYS GLY SEQRES 19 A 287 ILE LYS VAL LEU ALA VAL SER LEU ILE ALA ASN ASN SER SEQRES 20 A 287 ILE LEU ASP ALA GLU ASN ASP VAL SER ILE ASN HIS GLU SEQRES 21 A 287 LYS VAL LEU ALA VAL ALA GLU LYS ARG ALA ASP LEU LEU SEQRES 22 A 287 GLN MET TRP PHE LYS GLU ILE ILE THR ARG LEU PRO LEU SEQRES 23 A 287 ASP HET MES A 301 12 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 2 MES C6 H13 N O4 S FORMUL 3 HOH *211(H2 O) HELIX 1 AA1 ASN A 8 ASN A 24 1 17 HELIX 2 AA2 GLY A 38 GLU A 43 1 6 HELIX 3 AA3 ILE A 53 ILE A 55 5 3 HELIX 4 AA4 HIS A 88 GLY A 92 5 5 HELIX 5 AA5 SER A 94 GLY A 109 1 16 HELIX 6 AA6 PHE A 140 GLY A 144 1 5 HELIX 7 AA7 ASP A 169 ASN A 183 1 15 HELIX 8 AA8 PHE A 185 ASP A 187 5 3 HELIX 9 AA9 SER A 204 LEU A 214 1 11 HELIX 10 AB1 THR A 223 GLY A 234 1 12 HELIX 11 AB2 SER A 247 ASP A 254 1 8 HELIX 12 AB3 ASN A 258 LEU A 284 1 27 SHEET 1 AA110 GLU A 45 PRO A 51 0 SHEET 2 AA110 ASN A 69 VAL A 75 -1 O LEU A 70 N ILE A 50 SHEET 3 AA110 ARG A 78 GLN A 84 -1 O GLN A 84 N ASN A 69 SHEET 4 AA110 ILE A 29 ILE A 32 1 N ILE A 31 O MET A 83 SHEET 5 AA110 VAL A 112 GLY A 121 1 O LEU A 114 N GLY A 30 SHEET 6 AA110 LYS A 236 ASN A 246 1 O ASN A 245 N GLY A 121 SHEET 7 AA110 PHE A 131 ASN A 139 -1 N VAL A 132 O SER A 241 SHEET 8 AA110 VAL A 189 PHE A 196 1 O HIS A 190 N LEU A 133 SHEET 9 AA110 VAL A 218 GLY A 220 1 O VAL A 218 N ALA A 195 SHEET 10 AA110 VAL A 112 GLY A 121 -1 N GLY A 120 O VAL A 219 CISPEP 1 GLY A 199 PRO A 200 0 10.65 SITE 1 AC1 11 GLY A 34 SER A 35 ARG A 86 HIS A 88 SITE 2 AC1 11 ASN A 117 LEU A 118 PHE A 161 TYR A 202 SITE 3 AC1 11 SER A 222 HIS A 259 HOH A 476 CRYST1 97.847 97.847 97.847 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010220 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010220 0.00000