HEADER HYDROLASE 29-JUL-15 5CXV TITLE STRUCTURE OF THE HUMAN M1 MUSCARINIC ACETYLCHOLINE RECEPTOR BOUND TO TITLE 2 ANTAGONIST TIOTROPIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUSCARINIC ACETYLCHOLINE RECEPTOR M1,ENDOLYSIN,MUSCARINIC COMPND 3 ACETYLCHOLINE RECEPTOR M1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: LYSIS PROTEIN,LYSOZYME,MURAMIDASE; COMPND 6 EC: 3.2.1.17; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: FLAG PEPTIDE; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 10665; SOURCE 5 GENE: CHRM1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 11 ORGANISM_TAXID: 10665 KEYWDS ACETYLCHOLINE, ALLOSTERIC REGULATION, CARRIER PROTEINS, CHOLINERGIC KEYWDS 2 ANTAGONISTS, TIOTROPIUM RECEPTOR, MUSCARINIC M1, GPCR, SUBTYPE KEYWDS 3 SELECTIVITY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.SUN,D.FENG,X.LI,T.S.KOBILKA,B.K.KOBILKA REVDAT 3 30-MAR-16 5CXV 1 ATOM REVDAT 2 23-MAR-16 5CXV 1 JRNL REVDAT 1 09-MAR-16 5CXV 0 JRNL AUTH D.M.THAL,B.SUN,D.FENG,V.NAWARATNE,K.LEACH,C.C.FELDER, JRNL AUTH 2 M.G.BURES,D.A.EVANS,W.I.WEIS,P.BACHHAWAT,T.S.KOBILKA, JRNL AUTH 3 P.M.SEXTON,B.K.KOBILKA,A.CHRISTOPOULOS JRNL TITL CRYSTAL STRUCTURES OF THE M1 AND M4 MUSCARINIC ACETYLCHOLINE JRNL TITL 2 RECEPTORS. JRNL REF NATURE V. 531 335 2016 JRNL REFN ESSN 1476-4687 JRNL PMID 26958838 JRNL DOI 10.1038/NATURE17188 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0107 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 19223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1359 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3500 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.31000 REMARK 3 B22 (A**2) : -0.85000 REMARK 3 B33 (A**2) : -2.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.278 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.339 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.000 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.012 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CXV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 78 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20402 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.83600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33% PEG 300, 100 MM SODIUM ACETATE, REMARK 280 AND 100 MM BIS-TRIS PROPANE (PH 8.0), LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.02650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.84400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.09300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.84400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.02650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.09300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -24 REMARK 465 LYS A -23 REMARK 465 THR A -22 REMARK 465 ILE A -21 REMARK 465 ILE A -20 REMARK 465 ALA A -19 REMARK 465 LEU A -18 REMARK 465 SER A -17 REMARK 465 TYR A -16 REMARK 465 ILE A -15 REMARK 465 PHE A -14 REMARK 465 CYS A -13 REMARK 465 LEU A -12 REMARK 465 VAL A -11 REMARK 465 PHE A -10 REMARK 465 ALA A -9 REMARK 465 ASP A -8 REMARK 465 TYR A -7 REMARK 465 LYS A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ALA A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 1 REMARK 465 GLN A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 SER A 10 REMARK 465 PRO A 11 REMARK 465 GLN A 12 REMARK 465 ILE A 13 REMARK 465 THR A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 ALA A 17 REMARK 465 PRO A 18 REMARK 465 GLY A 19 REMARK 465 ARG A 440 REMARK 465 ARG A 441 REMARK 465 TRP A 442 REMARK 465 ARG A 443 REMARK 465 LYS A 444 REMARK 465 ILE A 445 REMARK 465 PRO A 446 REMARK 465 LYS A 447 REMARK 465 ARG A 448 REMARK 465 PRO A 449 REMARK 465 GLY A 450 REMARK 465 SER A 451 REMARK 465 VAL A 452 REMARK 465 HIS A 453 REMARK 465 ARG A 454 REMARK 465 THR A 455 REMARK 465 PRO A 456 REMARK 465 SER A 457 REMARK 465 ARG A 458 REMARK 465 GLN A 459 REMARK 465 CYS A 460 REMARK 465 HIS A 461 REMARK 465 HIS A 462 REMARK 465 HIS A 463 REMARK 465 HIS A 464 REMARK 465 HIS A 465 REMARK 465 HIS A 466 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 ARG A 134 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 185 CG CD OE1 NE2 REMARK 470 TRP A 209 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 209 CZ3 CH2 REMARK 470 ARG A 213 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 216 CG CD OE1 OE2 REMARK 470 LYS A1015 CG CD CE NZ REMARK 470 LYS A1018 CG CD CE NZ REMARK 470 GLU A1021 CG CD OE1 OE2 REMARK 470 LEU A1032 CG CD1 CD2 REMARK 470 LYS A1034 CG CD CE NZ REMARK 470 SER A1035 OG REMARK 470 SER A1037 OG REMARK 470 LEU A1038 CG CD1 CD2 REMARK 470 LYS A1042 CE NZ REMARK 470 SER A1043 OG REMARK 470 GLU A1044 CG CD OE1 OE2 REMARK 470 LEU A1045 CD1 CD2 REMARK 470 ASP A1046 CG OD1 OD2 REMARK 470 LYS A1047 CG CD CE NZ REMARK 470 ILE A1049 CD1 REMARK 470 ASN A1052 CG OD1 ND2 REMARK 470 THR A1053 OG1 CG2 REMARK 470 ASN A1054 CG OD1 ND2 REMARK 470 LYS A1064 CG CD CE NZ REMARK 470 ARG A1075 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1079 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1158 CG OD1 OD2 REMARK 470 LYS A 359 CG CD CE NZ REMARK 470 LYS A 392 CG CD CE NZ REMARK 470 ASP A 393 CG OD1 OD2 REMARK 470 GLU A 397 CG CD OE1 OE2 REMARK 470 ASP A 438 CG OD1 OD2 REMARK 470 LYS A 439 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N TRP A 91 O GLY A 176 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 183 55.85 -90.01 REMARK 500 PHE A 197 -57.01 -122.45 REMARK 500 LEU A 207 -70.70 -52.12 REMARK 500 ASP A1019 -158.76 -83.58 REMARK 500 ASN A1052 91.78 -66.16 REMARK 500 ASN A1054 13.02 59.52 REMARK 500 LYS A 423 -175.93 -69.19 REMARK 500 ALA A 424 -57.33 62.86 REMARK 500 TYR C 2 -77.94 -110.92 REMARK 500 LYS C 3 -60.39 44.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0HK A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Y01 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 507 DBREF 5CXV A 2 218 UNP P11229 ACM1_HUMAN 2 218 DBREF 5CXV A 1001 1160 UNP P00720 ENLYS_BPT4 2 161 DBREF 5CXV A 355 460 UNP P11229 ACM1_HUMAN 355 460 DBREF 5CXV C 1 7 PDB 5CXV 5CXV 1 7 SEQADV 5CXV MET A -24 UNP P11229 INITIATING METHIONINE SEQADV 5CXV LYS A -23 UNP P11229 EXPRESSION TAG SEQADV 5CXV THR A -22 UNP P11229 EXPRESSION TAG SEQADV 5CXV ILE A -21 UNP P11229 EXPRESSION TAG SEQADV 5CXV ILE A -20 UNP P11229 EXPRESSION TAG SEQADV 5CXV ALA A -19 UNP P11229 EXPRESSION TAG SEQADV 5CXV LEU A -18 UNP P11229 EXPRESSION TAG SEQADV 5CXV SER A -17 UNP P11229 EXPRESSION TAG SEQADV 5CXV TYR A -16 UNP P11229 EXPRESSION TAG SEQADV 5CXV ILE A -15 UNP P11229 EXPRESSION TAG SEQADV 5CXV PHE A -14 UNP P11229 EXPRESSION TAG SEQADV 5CXV CYS A -13 UNP P11229 EXPRESSION TAG SEQADV 5CXV LEU A -12 UNP P11229 EXPRESSION TAG SEQADV 5CXV VAL A -11 UNP P11229 EXPRESSION TAG SEQADV 5CXV PHE A -10 UNP P11229 EXPRESSION TAG SEQADV 5CXV ALA A -9 UNP P11229 EXPRESSION TAG SEQADV 5CXV ASP A -8 UNP P11229 EXPRESSION TAG SEQADV 5CXV TYR A -7 UNP P11229 EXPRESSION TAG SEQADV 5CXV LYS A -6 UNP P11229 EXPRESSION TAG SEQADV 5CXV ASP A -5 UNP P11229 EXPRESSION TAG SEQADV 5CXV ASP A -4 UNP P11229 EXPRESSION TAG SEQADV 5CXV ASP A -3 UNP P11229 EXPRESSION TAG SEQADV 5CXV ASP A -2 UNP P11229 EXPRESSION TAG SEQADV 5CXV ALA A -1 UNP P11229 EXPRESSION TAG SEQADV 5CXV ALA A 0 UNP P11229 EXPRESSION TAG SEQADV 5CXV ALA A 1 UNP P11229 EXPRESSION TAG SEQADV 5CXV GLN A 2 UNP P11229 ASN 2 ENGINEERED MUTATION SEQADV 5CXV GLN A 12 UNP P11229 ASN 12 ENGINEERED MUTATION SEQADV 5CXV GLN A 110 UNP P11229 ASN 110 ENGINEERED MUTATION SEQADV 5CXV GLY A 1011 UNP P00720 ARG 12 VARIANT SEQADV 5CXV THR A 1053 UNP P00720 CYS 54 ENGINEERED MUTATION SEQADV 5CXV ALA A 1096 UNP P00720 CYS 97 ENGINEERED MUTATION SEQADV 5CXV ARG A 1136 UNP P00720 ILE 137 VARIANT SEQADV 5CXV HIS A 461 UNP P11229 EXPRESSION TAG SEQADV 5CXV HIS A 462 UNP P11229 EXPRESSION TAG SEQADV 5CXV HIS A 463 UNP P11229 EXPRESSION TAG SEQADV 5CXV HIS A 464 UNP P11229 EXPRESSION TAG SEQADV 5CXV HIS A 465 UNP P11229 EXPRESSION TAG SEQADV 5CXV HIS A 466 UNP P11229 EXPRESSION TAG SEQRES 1 A 515 MET LYS THR ILE ILE ALA LEU SER TYR ILE PHE CYS LEU SEQRES 2 A 515 VAL PHE ALA ASP TYR LYS ASP ASP ASP ASP ALA ALA ALA SEQRES 3 A 515 GLN THR SER ALA PRO PRO ALA VAL SER PRO GLN ILE THR SEQRES 4 A 515 VAL LEU ALA PRO GLY LYS GLY PRO TRP GLN VAL ALA PHE SEQRES 5 A 515 ILE GLY ILE THR THR GLY LEU LEU SER LEU ALA THR VAL SEQRES 6 A 515 THR GLY ASN LEU LEU VAL LEU ILE SER PHE LYS VAL ASN SEQRES 7 A 515 THR GLU LEU LYS THR VAL ASN ASN TYR PHE LEU LEU SER SEQRES 8 A 515 LEU ALA CYS ALA ASP LEU ILE ILE GLY THR PHE SER MET SEQRES 9 A 515 ASN LEU TYR THR THR TYR LEU LEU MET GLY HIS TRP ALA SEQRES 10 A 515 LEU GLY THR LEU ALA CYS ASP LEU TRP LEU ALA LEU ASP SEQRES 11 A 515 TYR VAL ALA SER GLN ALA SER VAL MET ASN LEU LEU LEU SEQRES 12 A 515 ILE SER PHE ASP ARG TYR PHE SER VAL THR ARG PRO LEU SEQRES 13 A 515 SER TYR ARG ALA LYS ARG THR PRO ARG ARG ALA ALA LEU SEQRES 14 A 515 MET ILE GLY LEU ALA TRP LEU VAL SER PHE VAL LEU TRP SEQRES 15 A 515 ALA PRO ALA ILE LEU PHE TRP GLN TYR LEU VAL GLY GLU SEQRES 16 A 515 ARG THR VAL LEU ALA GLY GLN CYS TYR ILE GLN PHE LEU SEQRES 17 A 515 SER GLN PRO ILE ILE THR PHE GLY THR ALA MET ALA ALA SEQRES 18 A 515 PHE TYR LEU PRO VAL THR VAL MET CYS THR LEU TYR TRP SEQRES 19 A 515 ARG ILE TYR ARG GLU THR GLU ASN ARG ASN ILE PHE GLU SEQRES 20 A 515 MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE TYR SEQRES 21 A 515 LYS ASP THR GLU GLY TYR TYR THR ILE GLY ILE GLY HIS SEQRES 22 A 515 LEU LEU THR LYS SER PRO SER LEU ASN ALA ALA LYS SER SEQRES 23 A 515 GLU LEU ASP LYS ALA ILE GLY ARG ASN THR ASN GLY VAL SEQRES 24 A 515 ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP SEQRES 25 A 515 VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS SEQRES 26 A 515 LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL ARG ARG SEQRES 27 A 515 ALA ALA LEU ILE ASN MET VAL PHE GLN MET GLY GLU THR SEQRES 28 A 515 GLY VAL ALA GLY PHE THR ASN SER LEU ARG MET LEU GLN SEQRES 29 A 515 GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SEQRES 30 A 515 SER ARG TRP TYR ASN GLN THR PRO ASN ARG ALA LYS ARG SEQRES 31 A 515 VAL ILE THR THR PHE ARG THR GLY THR TRP ASP ALA TYR SEQRES 32 A 515 PHE SER LEU VAL LYS GLU LYS LYS ALA ALA ARG THR LEU SEQRES 33 A 515 SER ALA ILE LEU LEU ALA PHE ILE LEU THR TRP THR PRO SEQRES 34 A 515 TYR ASN ILE MET VAL LEU VAL SER THR PHE CYS LYS ASP SEQRES 35 A 515 CYS VAL PRO GLU THR LEU TRP GLU LEU GLY TYR TRP LEU SEQRES 36 A 515 CYS TYR VAL ASN SER THR ILE ASN PRO MET CYS TYR ALA SEQRES 37 A 515 LEU CYS ASN LYS ALA PHE ARG ASP THR PHE ARG LEU LEU SEQRES 38 A 515 LEU LEU CYS ARG TRP ASP LYS ARG ARG TRP ARG LYS ILE SEQRES 39 A 515 PRO LYS ARG PRO GLY SER VAL HIS ARG THR PRO SER ARG SEQRES 40 A 515 GLN CYS HIS HIS HIS HIS HIS HIS SEQRES 1 C 7 ASP TYR LYS ASP ASP ASP ASP HET 0HK A 501 26 HET Y01 A 502 35 HET EDO A 503 4 HET PGE A 504 10 HET EDO A 505 4 HET GOL A 506 6 HET EDO A 507 4 HETNAM 0HK (1R,2R,4S,5S,7S)-7-{[HYDROXY(DITHIOPHEN-2-YL) HETNAM 2 0HK ACETYL]OXY}-9,9-DIMETHYL-3-OXA-9- HETNAM 3 0HK AZONIATRICYCLO[3.3.1.0~2,4~]NONANE HETNAM Y01 CHOLESTEROL HEMISUCCINATE HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM GOL GLYCEROL HETSYN 0HK TIOTROPIUM HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 0HK C19 H22 N O4 S2 1+ FORMUL 4 Y01 C31 H50 O4 FORMUL 5 EDO 3(C2 H6 O2) FORMUL 6 PGE C6 H14 O4 FORMUL 8 GOL C3 H8 O3 FORMUL 10 HOH *10(H2 O) HELIX 1 AA1 GLY A 21 ASN A 53 1 33 HELIX 2 AA2 THR A 54 LYS A 57 5 4 HELIX 3 AA3 THR A 58 PHE A 77 1 20 HELIX 4 AA4 PHE A 77 GLY A 89 1 13 HELIX 5 AA5 GLY A 94 ARG A 129 1 36 HELIX 6 AA6 TYR A 133 ARG A 137 5 5 HELIX 7 AA7 THR A 138 GLY A 169 1 32 HELIX 8 AA8 GLN A 185 PHE A 197 1 13 HELIX 9 AA9 PHE A 197 ARG A 213 1 17 HELIX 10 AB1 GLU A 214 GLY A 1011 1 16 HELIX 11 AB2 SER A 1037 GLY A 1050 1 14 HELIX 12 AB3 THR A 1058 ASN A 1080 1 23 HELIX 13 AB4 LYS A 1082 LEU A 1090 1 9 HELIX 14 AB5 ASP A 1091 GLY A 1112 1 22 HELIX 15 AB6 PHE A 1113 GLN A 1122 1 10 HELIX 16 AB7 ARG A 1124 ALA A 1133 1 10 HELIX 17 AB8 SER A 1135 THR A 1141 1 7 HELIX 18 AB9 THR A 1141 GLY A 1155 1 15 HELIX 19 AC1 LEU A 357 CYS A 391 1 35 HELIX 20 AC2 PRO A 396 CYS A 407 1 12 HELIX 21 AC3 TYR A 408 ASN A 422 1 15 HELIX 22 AC4 ALA A 424 LEU A 434 1 11 SHEET 1 AA1 3 ARG A1013 LYS A1018 0 SHEET 2 AA1 3 TYR A1024 GLY A1027 -1 O THR A1025 N TYR A1017 SHEET 3 AA1 3 HIS A1030 THR A1033 -1 O LEU A1032 N TYR A1024 SSBOND 1 CYS A 98 CYS A 178 1555 1555 2.03 SSBOND 2 CYS A 391 CYS A 394 1555 1555 2.03 SITE 1 AC1 15 ASP A 105 TYR A 106 SER A 109 TRP A 157 SITE 2 AC1 15 THR A 189 THR A 192 ALA A 193 ALA A 196 SITE 3 AC1 15 PHE A 197 TRP A 378 TYR A 381 ASN A 382 SITE 4 AC1 15 TYR A 404 CYS A 407 TYR A 408 SITE 1 AC2 6 TRP A 23 PHE A 50 LYS A 57 TYR A 62 SITE 2 AC2 6 LEU A 65 TRP A 150 SITE 1 AC3 2 GLN A 165 GLY A 169 SITE 1 AC4 5 ILE A 119 ARG A 123 GLU A 360 ASP C 1 SITE 2 AC4 5 TYR C 2 SITE 1 AC5 2 GLU A1010 GOL A 506 SITE 1 AC6 5 GLY A1029 LEU A1031 ASP A1069 PHE A1103 SITE 2 AC6 5 EDO A 505 SITE 1 AC7 4 THR A1141 PRO A1142 ASN A1143 ARG A1144 CRYST1 58.053 72.186 175.688 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017226 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013853 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005692 0.00000