data_5CYJ # _entry.id 5CYJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5CYJ WWPDB D_1000212348 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CYJ _pdbx_database_status.recvd_initial_deposition_date 2015-07-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Teplova, M.' 1 'Farazi, T.A.' 2 'Patel, D.J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Q. Rev. Biophys.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1469-8994 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 49 _citation.language ? _citation.page_first e1 _citation.page_last e1 _citation.title 'Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1017/S0033583515000207 _citation.pdbx_database_id_PubMed 26347403 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Teplova, M.' 1 ? primary 'Farazi, T.A.' 2 ? primary 'Tuschl, T.' 3 ? primary 'Patel, D.J.' 4 ? # _cell.entry_id 5CYJ _cell.length_a 83.482 _cell.length_b 90.944 _cell.length_c 47.547 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CYJ _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA-binding protein with multiple splicing' 11184.552 2 ? ? 'RRM domain (UNP residues 14-110)' ? 2 water nat water 18.015 141 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RBP-MS,Heart and RRM expressed sequence,Hermes' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNA(MSE)NGIRFDPE IPQTLRLEFAKANTK(MSE)AKNKLV ; _entity_poly.pdbx_seq_one_letter_code_can ;SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAMNGIRFDPEIPQT LRLEFAKANTKMAKNKLV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLU n 1 3 ALA n 1 4 ASN n 1 5 LEU n 1 6 GLN n 1 7 GLU n 1 8 GLU n 1 9 GLU n 1 10 VAL n 1 11 ARG n 1 12 THR n 1 13 LEU n 1 14 PHE n 1 15 VAL n 1 16 SER n 1 17 GLY n 1 18 LEU n 1 19 PRO n 1 20 LEU n 1 21 ASP n 1 22 ILE n 1 23 LYS n 1 24 PRO n 1 25 ARG n 1 26 GLU n 1 27 LEU n 1 28 TYR n 1 29 LEU n 1 30 LEU n 1 31 PHE n 1 32 ARG n 1 33 PRO n 1 34 PHE n 1 35 LYS n 1 36 GLY n 1 37 TYR n 1 38 GLU n 1 39 GLY n 1 40 SER n 1 41 LEU n 1 42 ILE n 1 43 LYS n 1 44 LEU n 1 45 THR n 1 46 SER n 1 47 LYS n 1 48 GLN n 1 49 PRO n 1 50 VAL n 1 51 GLY n 1 52 PHE n 1 53 VAL n 1 54 SER n 1 55 PHE n 1 56 ASP n 1 57 SER n 1 58 ARG n 1 59 SER n 1 60 GLU n 1 61 ALA n 1 62 GLU n 1 63 ALA n 1 64 ALA n 1 65 LYS n 1 66 ASN n 1 67 ALA n 1 68 MSE n 1 69 ASN n 1 70 GLY n 1 71 ILE n 1 72 ARG n 1 73 PHE n 1 74 ASP n 1 75 PRO n 1 76 GLU n 1 77 ILE n 1 78 PRO n 1 79 GLN n 1 80 THR n 1 81 LEU n 1 82 ARG n 1 83 LEU n 1 84 GLU n 1 85 PHE n 1 86 ALA n 1 87 LYS n 1 88 ALA n 1 89 ASN n 1 90 THR n 1 91 LYS n 1 92 MSE n 1 93 ALA n 1 94 LYS n 1 95 ASN n 1 96 LYS n 1 97 LEU n 1 98 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 98 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RBPMS, HERMES' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBPMS_HUMAN _struct_ref.pdbx_db_accession Q93062 _struct_ref.pdbx_db_isoform Q93062-3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALNGIRFDPEIPQT LRLEFAKANTKMAKNKLV ; _struct_ref.pdbx_align_begin 14 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5CYJ A 1 ? 98 ? Q93062 14 ? 111 ? 14 111 2 1 5CYJ B 1 ? 98 ? Q93062 14 ? 111 ? 14 111 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CYJ MSE A 68 ? UNP Q93062 LEU 81 'engineered mutation' 81 1 2 5CYJ MSE B 68 ? UNP Q93062 LEU 81 'engineered mutation' 81 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CYJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M lithium sulfate, 0.1M Tris-HCl pH 8.5, 40% (v/v) PEG 400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-04-03 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5CYJ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 61.500 _reflns.d_resolution_high 1.790 _reflns.number_obs 17458 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.500 # _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.89 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.9 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5CYJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17448 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.970 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 61.50 _refine.ls_d_res_high 1.79 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.207 _refine.ls_R_factor_R_free 0.239 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.060 _refine.ls_number_reflns_R_free 882 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 29.68 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.270 _refine.pdbx_overall_phase_error 25.570 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1452 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 141 _refine_hist.number_atoms_total 1593 _refine_hist.d_res_high 1.79 _refine_hist.d_res_low 61.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 1480 'X-RAY DIFFRACTION' ? f_angle_d 1.292 ? ? 1990 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.907 ? ? 576 'X-RAY DIFFRACTION' ? f_chiral_restr 0.091 ? ? 222 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 256 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.7901 1.9022 2742 0.3624 99.00 0.3951 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.9022 2.0491 2717 0.2248 100.00 0.2682 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.0491 2.2553 2723 0.2046 100.00 0.2413 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.2553 2.5817 2728 0.2130 100.00 0.2493 . . 168 . . . . 'X-RAY DIFFRACTION' . 2.5817 3.2526 2773 0.2159 100.00 0.2564 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.2526 61.5361 2883 0.1831 100.00 0.2081 . . 148 . . . . # _struct.entry_id 5CYJ _struct.title 'X-ray structure of human RBPMS' _struct.pdbx_descriptor 'RNA-binding protein with multiple splicing' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CYJ _struct_keywords.text 'RRM domain, RNA-binding protein, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 23 ? ARG A 32 ? LYS A 36 ARG A 45 1 ? 10 HELX_P HELX_P2 AA2 SER A 57 ? ASN A 69 ? SER A 70 ASN A 82 1 ? 13 HELX_P HELX_P3 AA3 ALA A 93 ? LEU A 97 ? ALA A 106 LEU A 110 5 ? 5 HELX_P HELX_P4 AA4 LYS B 23 ? ARG B 32 ? LYS B 36 ARG B 45 1 ? 10 HELX_P HELX_P5 AA5 SER B 57 ? ASN B 69 ? SER B 70 ASN B 82 1 ? 13 HELX_P HELX_P6 AA6 ALA B 93 ? LEU B 97 ? ALA B 106 LEU B 110 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A ALA 67 C ? ? ? 1_555 A MSE 68 N ? ? A ALA 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.339 ? covale2 covale both ? A MSE 68 C ? ? ? 1_555 A ASN 69 N ? ? A MSE 81 A ASN 82 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale both ? A LYS 91 C ? ? ? 1_555 A MSE 92 N ? ? A LYS 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale both ? A MSE 92 C ? ? ? 1_555 A ALA 93 N ? ? A MSE 105 A ALA 106 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale both ? B ALA 67 C ? ? ? 1_555 B MSE 68 N ? ? B ALA 80 B MSE 81 1_555 ? ? ? ? ? ? ? 1.324 ? covale6 covale both ? B MSE 68 C ? ? ? 1_555 B ASN 69 N ? ? B MSE 81 B ASN 82 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale both ? B LYS 91 C ? ? ? 1_555 B MSE 92 N ? ? B LYS 104 B MSE 105 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale both ? B MSE 92 C ? ? ? 1_555 B ALA 93 N ? ? B MSE 105 B ALA 106 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 37 ? LYS A 43 ? TYR A 50 LYS A 56 AA1 2 VAL A 50 ? PHE A 55 ? VAL A 63 PHE A 68 AA1 3 THR A 12 ? SER A 16 ? THR A 25 SER A 29 AA1 4 ARG A 82 ? PHE A 85 ? ARG A 95 PHE A 98 AA2 1 TYR B 37 ? LYS B 43 ? TYR B 50 LYS B 56 AA2 2 VAL B 50 ? PHE B 55 ? VAL B 63 PHE B 68 AA2 3 THR B 12 ? SER B 16 ? THR B 25 SER B 29 AA2 4 ARG B 82 ? PHE B 85 ? ARG B 95 PHE B 98 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 38 ? N GLU A 51 O SER A 54 ? O SER A 67 AA1 2 3 O GLY A 51 ? O GLY A 64 N VAL A 15 ? N VAL A 28 AA1 3 4 N PHE A 14 ? N PHE A 27 O GLU A 84 ? O GLU A 97 AA2 1 2 N LYS B 43 ? N LYS B 56 O VAL B 50 ? O VAL B 63 AA2 2 3 O GLY B 51 ? O GLY B 64 N VAL B 15 ? N VAL B 28 AA2 3 4 N PHE B 14 ? N PHE B 27 O GLU B 84 ? O GLU B 97 # _atom_sites.entry_id 5CYJ _atom_sites.fract_transf_matrix[1][1] 0.011979 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010996 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021032 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 14 ? ? ? A . n A 1 2 GLU 2 15 ? ? ? A . n A 1 3 ALA 3 16 ? ? ? A . n A 1 4 ASN 4 17 ? ? ? A . n A 1 5 LEU 5 18 ? ? ? A . n A 1 6 GLN 6 19 ? ? ? A . n A 1 7 GLU 7 20 ? ? ? A . n A 1 8 GLU 8 21 21 GLU GLU A . n A 1 9 GLU 9 22 22 GLU GLU A . n A 1 10 VAL 10 23 23 VAL VAL A . n A 1 11 ARG 11 24 24 ARG ARG A . n A 1 12 THR 12 25 25 THR THR A . n A 1 13 LEU 13 26 26 LEU LEU A . n A 1 14 PHE 14 27 27 PHE PHE A . n A 1 15 VAL 15 28 28 VAL VAL A . n A 1 16 SER 16 29 29 SER SER A . n A 1 17 GLY 17 30 30 GLY GLY A . n A 1 18 LEU 18 31 31 LEU LEU A . n A 1 19 PRO 19 32 32 PRO PRO A . n A 1 20 LEU 20 33 33 LEU LEU A . n A 1 21 ASP 21 34 34 ASP ASP A . n A 1 22 ILE 22 35 35 ILE ILE A . n A 1 23 LYS 23 36 36 LYS LYS A . n A 1 24 PRO 24 37 37 PRO PRO A . n A 1 25 ARG 25 38 38 ARG ARG A . n A 1 26 GLU 26 39 39 GLU GLU A . n A 1 27 LEU 27 40 40 LEU LEU A . n A 1 28 TYR 28 41 41 TYR TYR A . n A 1 29 LEU 29 42 42 LEU LEU A . n A 1 30 LEU 30 43 43 LEU LEU A . n A 1 31 PHE 31 44 44 PHE PHE A . n A 1 32 ARG 32 45 45 ARG ARG A . n A 1 33 PRO 33 46 46 PRO PRO A . n A 1 34 PHE 34 47 47 PHE PHE A . n A 1 35 LYS 35 48 48 LYS LYS A . n A 1 36 GLY 36 49 49 GLY GLY A . n A 1 37 TYR 37 50 50 TYR TYR A . n A 1 38 GLU 38 51 51 GLU GLU A . n A 1 39 GLY 39 52 52 GLY GLY A . n A 1 40 SER 40 53 53 SER SER A . n A 1 41 LEU 41 54 54 LEU LEU A . n A 1 42 ILE 42 55 55 ILE ILE A . n A 1 43 LYS 43 56 56 LYS LYS A . n A 1 44 LEU 44 57 57 LEU LEU A . n A 1 45 THR 45 58 58 THR THR A . n A 1 46 SER 46 59 59 SER SER A . n A 1 47 LYS 47 60 60 LYS LYS A . n A 1 48 GLN 48 61 61 GLN GLN A . n A 1 49 PRO 49 62 62 PRO PRO A . n A 1 50 VAL 50 63 63 VAL VAL A . n A 1 51 GLY 51 64 64 GLY GLY A . n A 1 52 PHE 52 65 65 PHE PHE A . n A 1 53 VAL 53 66 66 VAL VAL A . n A 1 54 SER 54 67 67 SER SER A . n A 1 55 PHE 55 68 68 PHE PHE A . n A 1 56 ASP 56 69 69 ASP ASP A . n A 1 57 SER 57 70 70 SER SER A . n A 1 58 ARG 58 71 71 ARG ARG A . n A 1 59 SER 59 72 72 SER SER A . n A 1 60 GLU 60 73 73 GLU GLU A . n A 1 61 ALA 61 74 74 ALA ALA A . n A 1 62 GLU 62 75 75 GLU GLU A . n A 1 63 ALA 63 76 76 ALA ALA A . n A 1 64 ALA 64 77 77 ALA ALA A . n A 1 65 LYS 65 78 78 LYS LYS A . n A 1 66 ASN 66 79 79 ASN ASN A . n A 1 67 ALA 67 80 80 ALA ALA A . n A 1 68 MSE 68 81 81 MSE MSE A . n A 1 69 ASN 69 82 82 ASN ASN A . n A 1 70 GLY 70 83 83 GLY GLY A . n A 1 71 ILE 71 84 84 ILE ILE A . n A 1 72 ARG 72 85 85 ARG ARG A . n A 1 73 PHE 73 86 86 PHE PHE A . n A 1 74 ASP 74 87 87 ASP ASP A . n A 1 75 PRO 75 88 88 PRO PRO A . n A 1 76 GLU 76 89 89 GLU GLU A . n A 1 77 ILE 77 90 90 ILE ILE A . n A 1 78 PRO 78 91 91 PRO PRO A . n A 1 79 GLN 79 92 92 GLN GLN A . n A 1 80 THR 80 93 93 THR THR A . n A 1 81 LEU 81 94 94 LEU LEU A . n A 1 82 ARG 82 95 95 ARG ARG A . n A 1 83 LEU 83 96 96 LEU LEU A . n A 1 84 GLU 84 97 97 GLU GLU A . n A 1 85 PHE 85 98 98 PHE PHE A . n A 1 86 ALA 86 99 99 ALA ALA A . n A 1 87 LYS 87 100 100 LYS LYS A . n A 1 88 ALA 88 101 101 ALA ALA A . n A 1 89 ASN 89 102 102 ASN ASN A . n A 1 90 THR 90 103 103 THR THR A . n A 1 91 LYS 91 104 104 LYS LYS A . n A 1 92 MSE 92 105 105 MSE MSE A . n A 1 93 ALA 93 106 106 ALA ALA A . n A 1 94 LYS 94 107 107 LYS LYS A . n A 1 95 ASN 95 108 108 ASN ASN A . n A 1 96 LYS 96 109 109 LYS LYS A . n A 1 97 LEU 97 110 110 LEU LEU A . n A 1 98 VAL 98 111 111 VAL VAL A . n B 1 1 SER 1 14 ? ? ? B . n B 1 2 GLU 2 15 ? ? ? B . n B 1 3 ALA 3 16 ? ? ? B . n B 1 4 ASN 4 17 ? ? ? B . n B 1 5 LEU 5 18 ? ? ? B . n B 1 6 GLN 6 19 ? ? ? B . n B 1 7 GLU 7 20 ? ? ? B . n B 1 8 GLU 8 21 21 GLU GLU B . n B 1 9 GLU 9 22 22 GLU GLU B . n B 1 10 VAL 10 23 23 VAL VAL B . n B 1 11 ARG 11 24 24 ARG ARG B . n B 1 12 THR 12 25 25 THR THR B . n B 1 13 LEU 13 26 26 LEU LEU B . n B 1 14 PHE 14 27 27 PHE PHE B . n B 1 15 VAL 15 28 28 VAL VAL B . n B 1 16 SER 16 29 29 SER SER B . n B 1 17 GLY 17 30 30 GLY GLY B . n B 1 18 LEU 18 31 31 LEU LEU B . n B 1 19 PRO 19 32 32 PRO PRO B . n B 1 20 LEU 20 33 33 LEU LEU B . n B 1 21 ASP 21 34 34 ASP ASP B . n B 1 22 ILE 22 35 35 ILE ILE B . n B 1 23 LYS 23 36 36 LYS LYS B . n B 1 24 PRO 24 37 37 PRO PRO B . n B 1 25 ARG 25 38 38 ARG ARG B . n B 1 26 GLU 26 39 39 GLU GLU B . n B 1 27 LEU 27 40 40 LEU LEU B . n B 1 28 TYR 28 41 41 TYR TYR B . n B 1 29 LEU 29 42 42 LEU LEU B . n B 1 30 LEU 30 43 43 LEU LEU B . n B 1 31 PHE 31 44 44 PHE PHE B . n B 1 32 ARG 32 45 45 ARG ARG B . n B 1 33 PRO 33 46 46 PRO PRO B . n B 1 34 PHE 34 47 47 PHE PHE B . n B 1 35 LYS 35 48 48 LYS LYS B . n B 1 36 GLY 36 49 49 GLY GLY B . n B 1 37 TYR 37 50 50 TYR TYR B . n B 1 38 GLU 38 51 51 GLU GLU B . n B 1 39 GLY 39 52 52 GLY GLY B . n B 1 40 SER 40 53 53 SER SER B . n B 1 41 LEU 41 54 54 LEU LEU B . n B 1 42 ILE 42 55 55 ILE ILE B . n B 1 43 LYS 43 56 56 LYS LYS B . n B 1 44 LEU 44 57 57 LEU LEU B . n B 1 45 THR 45 58 58 THR THR B . n B 1 46 SER 46 59 59 SER SER B . n B 1 47 LYS 47 60 60 LYS LYS B . n B 1 48 GLN 48 61 61 GLN GLN B . n B 1 49 PRO 49 62 62 PRO PRO B . n B 1 50 VAL 50 63 63 VAL VAL B . n B 1 51 GLY 51 64 64 GLY GLY B . n B 1 52 PHE 52 65 65 PHE PHE B . n B 1 53 VAL 53 66 66 VAL VAL B . n B 1 54 SER 54 67 67 SER SER B . n B 1 55 PHE 55 68 68 PHE PHE B . n B 1 56 ASP 56 69 69 ASP ASP B . n B 1 57 SER 57 70 70 SER SER B . n B 1 58 ARG 58 71 71 ARG ARG B . n B 1 59 SER 59 72 72 SER SER B . n B 1 60 GLU 60 73 73 GLU GLU B . n B 1 61 ALA 61 74 74 ALA ALA B . n B 1 62 GLU 62 75 75 GLU GLU B . n B 1 63 ALA 63 76 76 ALA ALA B . n B 1 64 ALA 64 77 77 ALA ALA B . n B 1 65 LYS 65 78 78 LYS LYS B . n B 1 66 ASN 66 79 79 ASN ASN B . n B 1 67 ALA 67 80 80 ALA ALA B . n B 1 68 MSE 68 81 81 MSE MSE B . n B 1 69 ASN 69 82 82 ASN ASN B . n B 1 70 GLY 70 83 83 GLY GLY B . n B 1 71 ILE 71 84 84 ILE ILE B . n B 1 72 ARG 72 85 85 ARG ARG B . n B 1 73 PHE 73 86 86 PHE PHE B . n B 1 74 ASP 74 87 87 ASP ASP B . n B 1 75 PRO 75 88 88 PRO PRO B . n B 1 76 GLU 76 89 89 GLU GLU B . n B 1 77 ILE 77 90 90 ILE ILE B . n B 1 78 PRO 78 91 91 PRO PRO B . n B 1 79 GLN 79 92 92 GLN GLN B . n B 1 80 THR 80 93 93 THR THR B . n B 1 81 LEU 81 94 94 LEU LEU B . n B 1 82 ARG 82 95 95 ARG ARG B . n B 1 83 LEU 83 96 96 LEU LEU B . n B 1 84 GLU 84 97 97 GLU GLU B . n B 1 85 PHE 85 98 98 PHE PHE B . n B 1 86 ALA 86 99 99 ALA ALA B . n B 1 87 LYS 87 100 100 LYS LYS B . n B 1 88 ALA 88 101 101 ALA ALA B . n B 1 89 ASN 89 102 102 ASN ASN B . n B 1 90 THR 90 103 103 THR THR B . n B 1 91 LYS 91 104 104 LYS LYS B . n B 1 92 MSE 92 105 105 MSE MSE B . n B 1 93 ALA 93 106 106 ALA ALA B . n B 1 94 LYS 94 107 107 LYS LYS B . n B 1 95 ASN 95 108 108 ASN ASN B . n B 1 96 LYS 96 109 109 LYS LYS B . n B 1 97 LEU 97 110 110 LEU LEU B . n B 1 98 VAL 98 111 111 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 171 HOH HOH A . C 2 HOH 2 202 172 HOH HOH A . C 2 HOH 3 203 173 HOH HOH A . C 2 HOH 4 204 174 HOH HOH A . C 2 HOH 5 205 175 HOH HOH A . C 2 HOH 6 206 176 HOH HOH A . C 2 HOH 7 207 177 HOH HOH A . C 2 HOH 8 208 178 HOH HOH A . C 2 HOH 9 209 179 HOH HOH A . C 2 HOH 10 210 180 HOH HOH A . C 2 HOH 11 211 112 HOH HOH A . C 2 HOH 12 212 115 HOH HOH A . C 2 HOH 13 213 113 HOH HOH A . C 2 HOH 14 214 114 HOH HOH A . C 2 HOH 15 215 116 HOH HOH A . C 2 HOH 16 216 117 HOH HOH A . C 2 HOH 17 217 118 HOH HOH A . C 2 HOH 18 218 119 HOH HOH A . C 2 HOH 19 219 120 HOH HOH A . C 2 HOH 20 220 181 HOH HOH A . C 2 HOH 21 221 121 HOH HOH A . C 2 HOH 22 222 122 HOH HOH A . C 2 HOH 23 223 123 HOH HOH A . C 2 HOH 24 224 124 HOH HOH A . C 2 HOH 25 225 125 HOH HOH A . C 2 HOH 26 226 126 HOH HOH A . C 2 HOH 27 227 127 HOH HOH A . C 2 HOH 28 228 128 HOH HOH A . C 2 HOH 29 229 129 HOH HOH A . C 2 HOH 30 230 130 HOH HOH A . C 2 HOH 31 231 131 HOH HOH A . C 2 HOH 32 232 132 HOH HOH A . C 2 HOH 33 233 133 HOH HOH A . C 2 HOH 34 234 134 HOH HOH A . C 2 HOH 35 235 135 HOH HOH A . C 2 HOH 36 236 136 HOH HOH A . C 2 HOH 37 237 137 HOH HOH A . C 2 HOH 38 238 138 HOH HOH A . C 2 HOH 39 239 139 HOH HOH A . C 2 HOH 40 240 140 HOH HOH A . C 2 HOH 41 241 141 HOH HOH A . C 2 HOH 42 242 142 HOH HOH A . C 2 HOH 43 243 143 HOH HOH A . C 2 HOH 44 244 145 HOH HOH A . C 2 HOH 45 245 146 HOH HOH A . C 2 HOH 46 246 147 HOH HOH A . C 2 HOH 47 247 148 HOH HOH A . C 2 HOH 48 248 144 HOH HOH A . C 2 HOH 49 249 149 HOH HOH A . C 2 HOH 50 250 150 HOH HOH A . C 2 HOH 51 251 151 HOH HOH A . C 2 HOH 52 252 152 HOH HOH A . C 2 HOH 53 253 153 HOH HOH A . C 2 HOH 54 254 154 HOH HOH A . C 2 HOH 55 255 155 HOH HOH A . C 2 HOH 56 256 156 HOH HOH A . C 2 HOH 57 257 157 HOH HOH A . C 2 HOH 58 258 158 HOH HOH A . C 2 HOH 59 259 159 HOH HOH A . C 2 HOH 60 260 160 HOH HOH A . C 2 HOH 61 261 161 HOH HOH A . C 2 HOH 62 262 162 HOH HOH A . C 2 HOH 63 263 163 HOH HOH A . C 2 HOH 64 264 164 HOH HOH A . C 2 HOH 65 265 165 HOH HOH A . C 2 HOH 66 266 166 HOH HOH A . C 2 HOH 67 267 167 HOH HOH A . C 2 HOH 68 268 168 HOH HOH A . C 2 HOH 69 269 169 HOH HOH A . C 2 HOH 70 270 170 HOH HOH A . D 2 HOH 1 201 171 HOH HOH B . D 2 HOH 2 202 172 HOH HOH B . D 2 HOH 3 203 173 HOH HOH B . D 2 HOH 4 204 174 HOH HOH B . D 2 HOH 5 205 175 HOH HOH B . D 2 HOH 6 206 176 HOH HOH B . D 2 HOH 7 207 177 HOH HOH B . D 2 HOH 8 208 178 HOH HOH B . D 2 HOH 9 209 179 HOH HOH B . D 2 HOH 10 210 180 HOH HOH B . D 2 HOH 11 211 181 HOH HOH B . D 2 HOH 12 212 112 HOH HOH B . D 2 HOH 13 213 113 HOH HOH B . D 2 HOH 14 214 114 HOH HOH B . D 2 HOH 15 215 115 HOH HOH B . D 2 HOH 16 216 116 HOH HOH B . D 2 HOH 17 217 117 HOH HOH B . D 2 HOH 18 218 118 HOH HOH B . D 2 HOH 19 219 119 HOH HOH B . D 2 HOH 20 220 120 HOH HOH B . D 2 HOH 21 221 121 HOH HOH B . D 2 HOH 22 222 122 HOH HOH B . D 2 HOH 23 223 123 HOH HOH B . D 2 HOH 24 224 124 HOH HOH B . D 2 HOH 25 225 125 HOH HOH B . D 2 HOH 26 226 126 HOH HOH B . D 2 HOH 27 227 127 HOH HOH B . D 2 HOH 28 228 128 HOH HOH B . D 2 HOH 29 229 129 HOH HOH B . D 2 HOH 30 230 130 HOH HOH B . D 2 HOH 31 231 131 HOH HOH B . D 2 HOH 32 232 132 HOH HOH B . D 2 HOH 33 233 133 HOH HOH B . D 2 HOH 34 234 134 HOH HOH B . D 2 HOH 35 235 136 HOH HOH B . D 2 HOH 36 236 135 HOH HOH B . D 2 HOH 37 237 138 HOH HOH B . D 2 HOH 38 238 137 HOH HOH B . D 2 HOH 39 239 139 HOH HOH B . D 2 HOH 40 240 140 HOH HOH B . D 2 HOH 41 241 141 HOH HOH B . D 2 HOH 42 242 142 HOH HOH B . D 2 HOH 43 243 143 HOH HOH B . D 2 HOH 44 244 144 HOH HOH B . D 2 HOH 45 245 145 HOH HOH B . D 2 HOH 46 246 146 HOH HOH B . D 2 HOH 47 247 147 HOH HOH B . D 2 HOH 48 248 148 HOH HOH B . D 2 HOH 49 249 149 HOH HOH B . D 2 HOH 50 250 150 HOH HOH B . D 2 HOH 51 251 151 HOH HOH B . D 2 HOH 52 252 152 HOH HOH B . D 2 HOH 53 253 153 HOH HOH B . D 2 HOH 54 254 154 HOH HOH B . D 2 HOH 55 255 155 HOH HOH B . D 2 HOH 56 256 156 HOH HOH B . D 2 HOH 57 257 157 HOH HOH B . D 2 HOH 58 258 159 HOH HOH B . D 2 HOH 59 259 158 HOH HOH B . D 2 HOH 60 260 160 HOH HOH B . D 2 HOH 61 261 161 HOH HOH B . D 2 HOH 62 262 162 HOH HOH B . D 2 HOH 63 263 163 HOH HOH B . D 2 HOH 64 264 164 HOH HOH B . D 2 HOH 65 265 165 HOH HOH B . D 2 HOH 66 266 166 HOH HOH B . D 2 HOH 67 267 167 HOH HOH B . D 2 HOH 68 268 168 HOH HOH B . D 2 HOH 69 269 169 HOH HOH B . D 2 HOH 70 270 170 HOH HOH B . D 2 HOH 71 271 182 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 92 A MSE 105 ? MET 'modified residue' 2 B MSE 92 B MSE 105 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 222 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-30 2 'Structure model' 1 1 2016-10-05 3 'Structure model' 1 2 2017-09-27 4 'Structure model' 1 3 2019-12-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.country' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.2_1309 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 B ASP 87 ? ? O B HOH 201 ? ? 1.89 2 1 O A HOH 201 ? ? O A HOH 213 ? ? 1.91 3 1 O B HOH 214 ? ? O B HOH 263 ? ? 2.00 4 1 O A HOH 218 ? ? O A HOH 257 ? ? 2.08 5 1 NH2 B ARG 45 ? ? O B HOH 202 ? ? 2.16 6 1 OE1 B GLU 75 ? ? O B HOH 203 ? ? 2.17 7 1 O B HOH 238 ? ? O B HOH 261 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE1 A GLU 89 ? ? 1_555 OG B SER 59 ? ? 4_566 2.09 2 1 O B HOH 218 ? ? 1_555 O B HOH 237 ? ? 3_656 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 60 ? ? -131.72 -116.99 2 1 LYS B 60 ? ? -118.22 -117.81 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 14 ? A SER 1 2 1 Y 1 A GLU 15 ? A GLU 2 3 1 Y 1 A ALA 16 ? A ALA 3 4 1 Y 1 A ASN 17 ? A ASN 4 5 1 Y 1 A LEU 18 ? A LEU 5 6 1 Y 1 A GLN 19 ? A GLN 6 7 1 Y 1 A GLU 20 ? A GLU 7 8 1 Y 1 B SER 14 ? B SER 1 9 1 Y 1 B GLU 15 ? B GLU 2 10 1 Y 1 B ALA 16 ? B ALA 3 11 1 Y 1 B ASN 17 ? B ASN 4 12 1 Y 1 B LEU 18 ? B LEU 5 13 1 Y 1 B GLN 19 ? B GLN 6 14 1 Y 1 B GLU 20 ? B GLU 7 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM104962 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #