HEADER TRANSCRIPTION 30-JUL-15 5CYR TITLE CRYSTAL STRUCTURE OF THOSEA ASIGNA VIRUS RNA-DEPENDENT RNA POLYMERASE TITLE 2 (RDRP) COMPLEXED WITH ATP AND SSRNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DEPENDENT RNA POLYMERASE; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THOSEA ASIGNA VIRUS; SOURCE 3 ORGANISM_TAXID: 83810; SOURCE 4 GENE: RDRP; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1-HM KEYWDS RDRP, COMPLEX, ATP, SSRNA, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR D.S.FERRERO,M.BUXADERAS,J.F.RODRIGUEZ,N.VERDAGUER REVDAT 4 10-JAN-24 5CYR 1 REMARK REVDAT 3 06-SEP-17 5CYR 1 REMARK REVDAT 2 09-DEC-15 5CYR 1 JRNL REVDAT 1 11-NOV-15 5CYR 0 JRNL AUTH D.S.FERRERO,M.BUXADERAS,J.F.RODRIGUEZ,N.VERDAGUER JRNL TITL THE STRUCTURE OF THE RNA-DEPENDENT RNA POLYMERASE OF A JRNL TITL 2 PERMUTOTETRAVIRUS SUGGESTS A LINK BETWEEN PRIMER-DEPENDENT JRNL TITL 3 AND PRIMER-INDEPENDENT POLYMERASES. JRNL REF PLOS PATHOG. V. 11 05265 2015 JRNL REFN ESSN 1553-7374 JRNL PMID 26625123 JRNL DOI 10.1371/JOURNAL.PPAT.1005265 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 3 NUMBER OF REFLECTIONS : 27936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1412 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6038 - 7.5401 0.95 2978 155 0.1993 0.2396 REMARK 3 2 7.5401 - 5.9886 0.97 2914 157 0.2287 0.2694 REMARK 3 3 5.9886 - 5.2327 0.98 2893 162 0.2203 0.2541 REMARK 3 4 5.2327 - 4.7547 0.98 2891 135 0.2020 0.2331 REMARK 3 5 4.7547 - 4.4142 0.98 2911 162 0.1948 0.2322 REMARK 3 6 4.4142 - 4.1541 0.98 2926 146 0.2074 0.2454 REMARK 3 7 4.1541 - 3.9461 0.97 2814 157 0.2333 0.2984 REMARK 3 8 3.9461 - 3.7744 0.59 1725 95 0.3640 0.4222 REMARK 3 9 3.7744 - 3.6292 0.77 2253 126 0.4228 0.4912 REMARK 3 10 3.6292 - 3.5040 0.76 2219 117 0.3813 0.4309 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.580 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 10744 REMARK 3 ANGLE : 0.894 14567 REMARK 3 CHIRALITY : 0.033 1594 REMARK 3 PLANARITY : 0.003 1880 REMARK 3 DIHEDRAL : 14.997 3985 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212283. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27974 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.504 REMARK 200 RESOLUTION RANGE LOW (A) : 48.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15000 REMARK 200 FOR THE DATA SET : 5.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XHI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, LITHIUM SULFATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 71.25650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.16950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 108.54800 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 71.25650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.16950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 108.54800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 71.25650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.16950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.54800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 71.25650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 79.16950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 108.54800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -30 REMARK 465 SER B -29 REMARK 465 TYR B -28 REMARK 465 TYR B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 ASP B -20 REMARK 465 TYR B -19 REMARK 465 ASP B -18 REMARK 465 ILE B -17 REMARK 465 PRO B -16 REMARK 465 THR B -15 REMARK 465 THR B -14 REMARK 465 GLU B -13 REMARK 465 ASN B -12 REMARK 465 LEU B -11 REMARK 465 TYR B -10 REMARK 465 PHE B -9 REMARK 465 GLN B -8 REMARK 465 GLY B -7 REMARK 465 ALA B -6 REMARK 465 MET B -5 REMARK 465 GLY B -4 REMARK 465 ALA B -3 REMARK 465 MET B -2 REMARK 465 GLY B -1 REMARK 465 ILE B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 ASN B 5 REMARK 465 PRO B 6 REMARK 465 VAL B 7 REMARK 465 ILE B 8 REMARK 465 ALA B 9 REMARK 465 GLU B 674 REMARK 465 MET A -30 REMARK 465 SER A -29 REMARK 465 TYR A -28 REMARK 465 TYR A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 ASP A -20 REMARK 465 TYR A -19 REMARK 465 ASP A -18 REMARK 465 ILE A -17 REMARK 465 PRO A -16 REMARK 465 THR A -15 REMARK 465 THR A -14 REMARK 465 GLU A -13 REMARK 465 ASN A -12 REMARK 465 LEU A -11 REMARK 465 TYR A -10 REMARK 465 PHE A -9 REMARK 465 GLN A -8 REMARK 465 GLY A -7 REMARK 465 ALA A -6 REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 ILE A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 ASN A 5 REMARK 465 PRO A 6 REMARK 465 VAL A 7 REMARK 465 ILE A 8 REMARK 465 ALA A 9 REMARK 465 PRO A 10 REMARK 465 GLU A 673 REMARK 465 GLU A 674 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 54 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 547 CG CD CE NZ REMARK 470 LYS B 672 CG CD CE NZ REMARK 470 GLU B 673 CG CD OE1 OE2 REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 LYS A 362 CG CD CE NZ REMARK 470 LYS A 473 CG CD CE NZ REMARK 470 ARG A 578 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 672 CG CD CE NZ REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 LYS B 547 REMARK 475 TYR B 548 REMARK 475 ARG B 549 REMARK 475 SER B 550 REMARK 475 LYS B 551 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 252 CZ REMARK 480 ARG A 401 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE LYS B 69 O ALA B 124 1.56 REMARK 500 NZ LYS B 69 CB ALA B 124 1.61 REMARK 500 OE2 GLU B 50 O CYS B 52 1.66 REMARK 500 O SER A 129 N ASP A 130 1.78 REMARK 500 O PRO B 398 N ALA B 400 1.95 REMARK 500 OH TYR B 282 O3 PO4 B 703 1.97 REMARK 500 CD LYS B 69 O ALA B 124 2.06 REMARK 500 O ARG B 54 N SER B 56 2.17 REMARK 500 O VAL A 570 OH TYR A 638 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N GLY A 53 OE1 GLU A 55 2555 1.93 REMARK 500 CA GLY A 53 OE1 GLU A 55 2555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE B 122 C ALA B 123 N 0.297 REMARK 500 THR B 128 C SER B 129 N -0.359 REMARK 500 THR A 128 C SER A 129 N -0.531 REMARK 500 SER A 129 C ASP A 130 N -0.229 REMARK 500 LEU A 496 C VAL A 497 N -0.294 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY B 199 N - CA - C ANGL. DEV. = -23.3 DEGREES REMARK 500 GLU B 200 N - CA - CB ANGL. DEV. = -18.9 DEGREES REMARK 500 LYS B 246 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 MET B 373 N - CA - CB ANGL. DEV. = -18.8 DEGREES REMARK 500 GLU B 523 CB - CA - C ANGL. DEV. = 34.0 DEGREES REMARK 500 GLU B 523 N - CA - C ANGL. DEV. = -23.9 DEGREES REMARK 500 THR A 128 CA - C - N ANGL. DEV. = -20.2 DEGREES REMARK 500 THR A 128 O - C - N ANGL. DEV. = 14.8 DEGREES REMARK 500 SER A 129 C - N - CA ANGL. DEV. = -19.5 DEGREES REMARK 500 SER A 129 CA - C - N ANGL. DEV. = 16.5 DEGREES REMARK 500 SER A 129 O - C - N ANGL. DEV. = -23.4 DEGREES REMARK 500 ASP A 130 C - N - CA ANGL. DEV. = 16.5 DEGREES REMARK 500 GLN A 372 CB - CA - C ANGL. DEV. = -32.0 DEGREES REMARK 500 MET A 373 N - CA - CB ANGL. DEV. = -18.9 DEGREES REMARK 500 ASN A 498 CB - CA - C ANGL. DEV. = -12.2 DEGREES REMARK 500 ASN A 498 N - CA - C ANGL. DEV. = -25.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 11 -122.79 33.72 REMARK 500 ALA B 38 -88.60 -49.84 REMARK 500 PRO B 49 106.79 -53.78 REMARK 500 GLU B 50 152.24 -44.92 REMARK 500 CYS B 52 -151.69 -160.37 REMARK 500 GLU B 55 -50.72 56.00 REMARK 500 GLN B 58 -72.37 -60.12 REMARK 500 HIS B 99 76.74 -154.53 REMARK 500 HIS B 110 135.96 -37.49 REMARK 500 ASN B 111 -166.87 -74.12 REMARK 500 ALA B 123 175.88 -44.74 REMARK 500 ALA B 124 51.45 -155.82 REMARK 500 PHE B 138 -32.42 -131.95 REMARK 500 ASP B 196 89.51 -58.75 REMARK 500 ASP B 247 72.36 -117.25 REMARK 500 ARG B 252 -74.35 -50.56 REMARK 500 ASP B 268 -154.89 -147.29 REMARK 500 ILE B 306 -169.26 -119.12 REMARK 500 GLU B 309 -85.96 -90.54 REMARK 500 TYR B 317 82.59 -55.43 REMARK 500 ARG B 334 25.61 -79.22 REMARK 500 PRO B 343 136.06 -38.28 REMARK 500 PRO B 344 -159.74 -85.36 REMARK 500 TYR B 349 79.11 -116.42 REMARK 500 GLN B 372 92.51 69.47 REMARK 500 THR B 399 21.86 -45.70 REMARK 500 ALA B 400 37.92 -165.25 REMARK 500 THR B 416 -70.33 -121.37 REMARK 500 ILE B 422 -70.47 -124.81 REMARK 500 HIS B 483 -8.42 -143.08 REMARK 500 THR B 491 -33.76 -131.48 REMARK 500 TRP B 507 -70.60 -57.80 REMARK 500 ARG B 522 -101.82 -107.53 REMARK 500 GLU B 523 -77.41 -108.32 REMARK 500 ARG B 545 31.84 -82.61 REMARK 500 ARG B 549 67.27 60.24 REMARK 500 SER B 550 -72.27 -2.44 REMARK 500 ARG B 605 49.93 -95.71 REMARK 500 ASP B 617 -107.11 56.23 REMARK 500 ASP B 641 -168.27 -77.51 REMARK 500 LYS B 672 -119.04 -127.02 REMARK 500 HIS A 99 68.00 -119.43 REMARK 500 PRO A 106 136.88 -38.69 REMARK 500 ASN A 113 86.42 37.59 REMARK 500 LYS A 119 -147.43 -77.51 REMARK 500 ARG A 120 86.25 -167.46 REMARK 500 PHE A 122 43.42 -151.99 REMARK 500 ASN A 127 66.10 -110.83 REMARK 500 THR A 128 169.57 65.49 REMARK 500 SER A 129 -30.24 -143.94 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 199 GLU B 200 -149.24 REMARK 500 GLU B 523 ASN B 524 -147.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR B 128 -13.60 REMARK 500 THR A 128 -11.32 REMARK 500 SER A 129 21.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 705 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CX6 RELATED DB: PDB REMARK 900 5CX6 CONTAINS THE SAME PROTEIN COMPLEXED WITH CDP REMARK 900 RELATED ID: 5CXE RELATED DB: PDB REMARK 900 5CXE CONTAINS THE SAME PROTEIN COMPLEXED WITH SSRNA REMARK 900 RELATED ID: 4XHA RELATED DB: PDB REMARK 900 4XHA CONTAINS THE SAME PROTEIN COMPLEXED WITH LUTETIUM REMARK 900 RELATED ID: 4XHI RELATED DB: PDB REMARK 900 4XHI CONTAINS THE SAME PROTEIN IN THE APO-FORM DBREF 5CYR B 1 674 UNP Q6A562 Q6A562_9VIRU 1 674 DBREF 5CYR A 1 674 UNP Q6A562 Q6A562_9VIRU 1 674 SEQADV 5CYR MET B -30 UNP Q6A562 INITIATING METHIONINE SEQADV 5CYR SER B -29 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR B -28 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR B -27 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS B -26 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS B -25 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS B -24 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS B -23 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS B -22 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS B -21 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ASP B -20 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR B -19 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ASP B -18 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ILE B -17 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR PRO B -16 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR THR B -15 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR THR B -14 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLU B -13 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ASN B -12 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR LEU B -11 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR B -10 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR PHE B -9 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLN B -8 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLY B -7 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ALA B -6 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR MET B -5 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLY B -4 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ALA B -3 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR MET B -2 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLY B -1 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ILE B 0 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR MET A -30 UNP Q6A562 INITIATING METHIONINE SEQADV 5CYR SER A -29 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR A -28 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR A -27 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS A -26 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS A -25 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS A -24 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS A -23 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS A -22 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR HIS A -21 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ASP A -20 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR A -19 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ASP A -18 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ILE A -17 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR PRO A -16 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR THR A -15 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR THR A -14 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLU A -13 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ASN A -12 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR LEU A -11 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR TYR A -10 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR PHE A -9 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLN A -8 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLY A -7 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ALA A -6 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR MET A -5 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLY A -4 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ALA A -3 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR MET A -2 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR GLY A -1 UNP Q6A562 EXPRESSION TAG SEQADV 5CYR ILE A 0 UNP Q6A562 EXPRESSION TAG SEQRES 1 B 705 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 705 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 B 705 GLY ALA MET GLY ILE MET GLU ALA SER ASN PRO VAL ILE SEQRES 4 B 705 ALA PRO THR ARG LEU SER LEU GLU ALA MET LEU ALA GLU SEQRES 5 B 705 ARG ALA MET VAL ALA ARG GLN ASP LEU ALA GLY LEU LYS SEQRES 6 B 705 ARG LYS LEU ALA GLY ALA ASP ARG VAL LEU ALA PRO GLN SEQRES 7 B 705 SER PRO GLU GLN CYS GLY ARG GLU SER ALA GLN ALA GLN SEQRES 8 B 705 ALA ARG SER VAL THR SER GLU LEU LYS SER ALA VAL LYS SEQRES 9 B 705 GLU ALA GLN GLY LEU GLU HIS GLN THR LEU ASP PHE LEU SEQRES 10 B 705 GLU GLN LEU GLY GLU TYR PRO VAL CYS GLY ILE LEU HIS SEQRES 11 B 705 GLY ASP HIS PRO VAL HIS PRO SER GLY THR HIS ASN ASN SEQRES 12 B 705 ASN GLY LYS VAL SER VAL LYS ARG GLN PHE ALA ALA GLY SEQRES 13 B 705 VAL ASN THR SER ASP ALA LEU THR CYS ALA PHE ARG PHE SEQRES 14 B 705 GLU ASP SER ASP LEU VAL ARG GLU THR ALA LEU LYS THR SEQRES 15 B 705 THR TYR THR ASP GLY THR TRP ALA GLY PHE VAL GLN ARG SEQRES 16 B 705 LEU LYS MET GLN THR THR ARG LYS CYS VAL GLN GLU LYS SEQRES 17 B 705 VAL SER ARG LYS LEU LEU LYS GLN LEU PHE PRO TYR ASP SEQRES 18 B 705 PRO GLN LYS LEU VAL ASP VAL SER GLY GLU LEU SER GLU SEQRES 19 B 705 LEU VAL LEU GLY ILE LYS THR ASN ALA ILE ALA SER ALA SEQRES 20 B 705 GLY PRO PRO TYR TRP ARG THR LYS ARG ASP ALA LEU PRO SEQRES 21 B 705 ASP MET LEU ASP CYS VAL LEU PRO LEU LEU TYR ASP HIS SEQRES 22 B 705 ILE VAL ARG LYS ASP LEU THR THR LEU ARG ASN LYS HIS SEQRES 23 B 705 PRO GLU LEU PHE LEU ALA GLU CYS LYS ASN LYS THR ASP SEQRES 24 B 705 ARG TYR GLU VAL GLU SER LEU GLY GLU LYS THR ARG PRO SEQRES 25 B 705 TYR PHE SER HIS PRO PHE HIS LEU SER ALA LEU VAL SER SEQRES 26 B 705 VAL LEU SER GLN SER PHE SER GLY ALA LEU LYS ILE MET SEQRES 27 B 705 THR GLU ASP SER THR SER PHE ASN ALA TYR GLY PHE SER SEQRES 28 B 705 TRP THR ASN GLY GLY ALA GLU ASP LEU ALA ILE TRP ALA SEQRES 29 B 705 ARG GLN ALA GLY GLU ALA GLY LYS LYS PRO PRO ARG ILE SEQRES 30 B 705 ALA CYS TYR GLY ASP ASP THR ASP ILE TYR TYR ARG LYS SEQRES 31 B 705 ASP GLY LYS LEU TYR ARG ILE CYS PRO ASP PHE LYS GLN SEQRES 32 B 705 MET ASP GLY SER VAL ASP ALA THR THR ILE GLU ALA VAL SEQRES 33 B 705 VAL ASP TYR VAL VAL ASP ALA HIS VAL LYS GLN TYR PRO SEQRES 34 B 705 THR ALA ARG GLN PHE TRP GLU GLU VAL GLY LYS LEU TRP SEQRES 35 B 705 VAL GLU MET ALA THR GLN SER PRO PHE LEU ILE ASP GLY SEQRES 36 B 705 THR LYS VAL TYR ARG LYS MET GLN LYS ASP GLY LEU MET SEQRES 37 B 705 THR GLY VAL VAL GLY THR THR LEU PHE ASP THR VAL LYS SEQRES 38 B 705 SER ALA LEU ALA TYR ASN ASP TRP ALA ASP GLN LEU MET SEQRES 39 B 705 PHE GLY SER LEU ASN LEU LEU GLU GLU LYS TYR ALA ILE SEQRES 40 B 705 GLU PHE PHE LYS ASN LYS HIS GLY LEU VAL ILE LYS GLU SEQRES 41 B 705 GLY THR TRP LYS PRO ALA LEU VAL ASN GLU ASP PRO GLY SEQRES 42 B 705 PHE GLY GLU LEU TRP THR GLU GLN LYS PHE LEU GLY LEU SEQRES 43 B 705 GLN LEU LYS VAL VAL ARG ARG GLU ASN GLU LYS VAL TYR SEQRES 44 B 705 VAL PRO ASN LEU PRO PHE GLU ASP TRP LEU THR MET TRP SEQRES 45 B 705 VAL THR PRO ARG SER LYS TYR ARG SER LYS GLU THR GLU SEQRES 46 B 705 THR MET ARG GLU ARG THR LEU PHE ASP ARG ALA ARG GLY SEQRES 47 B 705 LEU LEU VAL THR GLY ALA VAL PHE ASP GLU ARG ALA ARG SEQRES 48 B 705 GLY LEU MET GLY ALA VAL ILE ASN SER THR ALA PRO GLU SEQRES 49 B 705 VAL VAL CYS MET ARG VAL GLN GLU GLY GLY GLY ARG GLY SEQRES 50 B 705 ALA PRO PRO ALA TYR ALA PHE LEU THR ARG ASP GLY VAL SEQRES 51 B 705 PHE GLU PHE PRO ILE SER ASP GLY TYR PRO SER TYR ASP SEQRES 52 B 705 TRP VAL VAL SER LEU TYR SER ARG ASP HIS PRO CYS ASP SEQRES 53 B 705 MET PRO ARG VAL PHE PRO GLU ALA ALA THR LEU ILE ALA SEQRES 54 B 705 SER TYR ARG LYS GLN VAL MET ASP THR ARG VAL VAL ILE SEQRES 55 B 705 LYS GLU GLU SEQRES 1 A 705 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 705 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 705 GLY ALA MET GLY ILE MET GLU ALA SER ASN PRO VAL ILE SEQRES 4 A 705 ALA PRO THR ARG LEU SER LEU GLU ALA MET LEU ALA GLU SEQRES 5 A 705 ARG ALA MET VAL ALA ARG GLN ASP LEU ALA GLY LEU LYS SEQRES 6 A 705 ARG LYS LEU ALA GLY ALA ASP ARG VAL LEU ALA PRO GLN SEQRES 7 A 705 SER PRO GLU GLN CYS GLY ARG GLU SER ALA GLN ALA GLN SEQRES 8 A 705 ALA ARG SER VAL THR SER GLU LEU LYS SER ALA VAL LYS SEQRES 9 A 705 GLU ALA GLN GLY LEU GLU HIS GLN THR LEU ASP PHE LEU SEQRES 10 A 705 GLU GLN LEU GLY GLU TYR PRO VAL CYS GLY ILE LEU HIS SEQRES 11 A 705 GLY ASP HIS PRO VAL HIS PRO SER GLY THR HIS ASN ASN SEQRES 12 A 705 ASN GLY LYS VAL SER VAL LYS ARG GLN PHE ALA ALA GLY SEQRES 13 A 705 VAL ASN THR SER ASP ALA LEU THR CYS ALA PHE ARG PHE SEQRES 14 A 705 GLU ASP SER ASP LEU VAL ARG GLU THR ALA LEU LYS THR SEQRES 15 A 705 THR TYR THR ASP GLY THR TRP ALA GLY PHE VAL GLN ARG SEQRES 16 A 705 LEU LYS MET GLN THR THR ARG LYS CYS VAL GLN GLU LYS SEQRES 17 A 705 VAL SER ARG LYS LEU LEU LYS GLN LEU PHE PRO TYR ASP SEQRES 18 A 705 PRO GLN LYS LEU VAL ASP VAL SER GLY GLU LEU SER GLU SEQRES 19 A 705 LEU VAL LEU GLY ILE LYS THR ASN ALA ILE ALA SER ALA SEQRES 20 A 705 GLY PRO PRO TYR TRP ARG THR LYS ARG ASP ALA LEU PRO SEQRES 21 A 705 ASP MET LEU ASP CYS VAL LEU PRO LEU LEU TYR ASP HIS SEQRES 22 A 705 ILE VAL ARG LYS ASP LEU THR THR LEU ARG ASN LYS HIS SEQRES 23 A 705 PRO GLU LEU PHE LEU ALA GLU CYS LYS ASN LYS THR ASP SEQRES 24 A 705 ARG TYR GLU VAL GLU SER LEU GLY GLU LYS THR ARG PRO SEQRES 25 A 705 TYR PHE SER HIS PRO PHE HIS LEU SER ALA LEU VAL SER SEQRES 26 A 705 VAL LEU SER GLN SER PHE SER GLY ALA LEU LYS ILE MET SEQRES 27 A 705 THR GLU ASP SER THR SER PHE ASN ALA TYR GLY PHE SER SEQRES 28 A 705 TRP THR ASN GLY GLY ALA GLU ASP LEU ALA ILE TRP ALA SEQRES 29 A 705 ARG GLN ALA GLY GLU ALA GLY LYS LYS PRO PRO ARG ILE SEQRES 30 A 705 ALA CYS TYR GLY ASP ASP THR ASP ILE TYR TYR ARG LYS SEQRES 31 A 705 ASP GLY LYS LEU TYR ARG ILE CYS PRO ASP PHE LYS GLN SEQRES 32 A 705 MET ASP GLY SER VAL ASP ALA THR THR ILE GLU ALA VAL SEQRES 33 A 705 VAL ASP TYR VAL VAL ASP ALA HIS VAL LYS GLN TYR PRO SEQRES 34 A 705 THR ALA ARG GLN PHE TRP GLU GLU VAL GLY LYS LEU TRP SEQRES 35 A 705 VAL GLU MET ALA THR GLN SER PRO PHE LEU ILE ASP GLY SEQRES 36 A 705 THR LYS VAL TYR ARG LYS MET GLN LYS ASP GLY LEU MET SEQRES 37 A 705 THR GLY VAL VAL GLY THR THR LEU PHE ASP THR VAL LYS SEQRES 38 A 705 SER ALA LEU ALA TYR ASN ASP TRP ALA ASP GLN LEU MET SEQRES 39 A 705 PHE GLY SER LEU ASN LEU LEU GLU GLU LYS TYR ALA ILE SEQRES 40 A 705 GLU PHE PHE LYS ASN LYS HIS GLY LEU VAL ILE LYS GLU SEQRES 41 A 705 GLY THR TRP LYS PRO ALA LEU VAL ASN GLU ASP PRO GLY SEQRES 42 A 705 PHE GLY GLU LEU TRP THR GLU GLN LYS PHE LEU GLY LEU SEQRES 43 A 705 GLN LEU LYS VAL VAL ARG ARG GLU ASN GLU LYS VAL TYR SEQRES 44 A 705 VAL PRO ASN LEU PRO PHE GLU ASP TRP LEU THR MET TRP SEQRES 45 A 705 VAL THR PRO ARG SER LYS TYR ARG SER LYS GLU THR GLU SEQRES 46 A 705 THR MET ARG GLU ARG THR LEU PHE ASP ARG ALA ARG GLY SEQRES 47 A 705 LEU LEU VAL THR GLY ALA VAL PHE ASP GLU ARG ALA ARG SEQRES 48 A 705 GLY LEU MET GLY ALA VAL ILE ASN SER THR ALA PRO GLU SEQRES 49 A 705 VAL VAL CYS MET ARG VAL GLN GLU GLY GLY GLY ARG GLY SEQRES 50 A 705 ALA PRO PRO ALA TYR ALA PHE LEU THR ARG ASP GLY VAL SEQRES 51 A 705 PHE GLU PHE PRO ILE SER ASP GLY TYR PRO SER TYR ASP SEQRES 52 A 705 TRP VAL VAL SER LEU TYR SER ARG ASP HIS PRO CYS ASP SEQRES 53 A 705 MET PRO ARG VAL PHE PRO GLU ALA ALA THR LEU ILE ALA SEQRES 54 A 705 SER TYR ARG LYS GLN VAL MET ASP THR ARG VAL VAL ILE SEQRES 55 A 705 LYS GLU GLU HET ATP B 701 31 HET SO4 B 702 5 HET PO4 B 703 5 HET MG A 701 1 HET SO4 A 702 5 HET PO4 A 703 5 HET PO4 A 704 5 HET PO4 A 705 5 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM SO4 SULFATE ION HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 PO4 4(O4 P 3-) FORMUL 6 MG MG 2+ HELIX 1 AA1 LEU B 15 ARG B 27 1 13 HELIX 2 AA2 ASP B 29 LEU B 37 1 9 HELIX 3 AA3 ALA B 57 GLY B 77 1 21 HELIX 4 AA4 SER B 129 GLU B 139 1 11 HELIX 5 AA5 ASP B 140 LYS B 150 1 11 HELIX 6 AA6 THR B 157 THR B 170 1 14 HELIX 7 AA7 SER B 179 PHE B 187 1 9 HELIX 8 AA8 ASP B 190 LEU B 194 5 5 HELIX 9 AA9 GLU B 200 GLY B 207 1 8 HELIX 10 AB1 THR B 223 ASP B 233 1 11 HELIX 11 AB2 CYS B 234 ARG B 245 1 12 HELIX 12 AB3 THR B 250 HIS B 255 1 6 HELIX 13 AB4 PRO B 256 PHE B 259 5 4 HELIX 14 AB5 GLU B 273 LYS B 278 5 6 HELIX 15 AB6 PRO B 286 GLY B 302 1 17 HELIX 16 AB7 GLY B 324 ARG B 334 1 11 HELIX 17 AB8 MET B 373 VAL B 377 5 5 HELIX 18 AB9 ASP B 378 TYR B 397 1 20 HELIX 19 AC1 ALA B 400 GLN B 417 1 18 HELIX 20 AC2 GLY B 442 MET B 463 1 22 HELIX 21 AC3 PHE B 464 GLY B 465 5 2 HELIX 22 AC4 SER B 466 LEU B 470 5 5 HELIX 23 AC5 GLU B 471 LYS B 482 1 12 HELIX 24 AC6 PRO B 533 THR B 543 1 11 HELIX 25 AC7 GLU B 554 GLY B 572 1 19 HELIX 26 AC8 ASP B 576 THR B 590 1 15 HELIX 27 AC9 PRO B 592 MET B 597 1 6 HELIX 28 AD1 SER B 630 SER B 639 1 10 HELIX 29 AD2 GLU B 652 SER B 659 1 8 HELIX 30 AD3 LEU A 15 ARG A 27 1 13 HELIX 31 AD4 ASP A 29 ALA A 38 1 10 HELIX 32 AD5 GLY A 53 GLN A 76 1 24 HELIX 33 AD6 SER A 129 GLU A 139 1 11 HELIX 34 AD7 ASP A 140 ALA A 148 1 9 HELIX 35 AD8 THR A 157 ARG A 171 1 15 HELIX 36 AD9 SER A 179 PHE A 187 1 9 HELIX 37 AE1 GLU A 200 GLY A 207 1 8 HELIX 38 AE2 ALA A 227 CYS A 234 1 8 HELIX 39 AE3 CYS A 234 VAL A 244 1 11 HELIX 40 AE4 ASP A 247 HIS A 255 1 9 HELIX 41 AE5 PRO A 256 LEU A 260 5 5 HELIX 42 AE6 GLU A 273 LEU A 275 5 3 HELIX 43 AE7 PRO A 286 LEU A 304 1 19 HELIX 44 AE8 GLY A 324 GLN A 335 1 12 HELIX 45 AE9 ASP A 378 LYS A 395 1 18 HELIX 46 AF1 TYR A 397 ARG A 401 5 5 HELIX 47 AF2 GLN A 402 THR A 416 1 15 HELIX 48 AF3 THR A 444 MET A 463 1 20 HELIX 49 AF4 PHE A 464 GLY A 465 5 2 HELIX 50 AF5 SER A 466 LEU A 470 5 5 HELIX 51 AF6 GLU A 471 GLY A 484 1 14 HELIX 52 AF7 PRO A 533 THR A 543 1 11 HELIX 53 AF8 THR A 553 GLY A 572 1 20 HELIX 54 AF9 ASP A 576 THR A 590 1 15 HELIX 55 AG1 PRO A 592 MET A 597 1 6 HELIX 56 AG2 SER A 630 SER A 639 1 10 HELIX 57 AG3 ALA A 653 ALA A 658 1 6 SHEET 1 AA1 2 LEU B 13 SER B 14 0 SHEET 2 AA1 2 LYS A 209 THR A 210 -1 O THR A 210 N LEU B 13 SHEET 1 AA2 5 LEU B 86 GLN B 88 0 SHEET 2 AA2 5 VAL B 427 LYS B 430 -1 O ARG B 429 N GLU B 87 SHEET 3 AA2 5 PHE B 420 LEU B 421 -1 N PHE B 420 O TYR B 428 SHEET 4 AA2 5 ALA B 261 ASN B 265 1 N CYS B 263 O LEU B 421 SHEET 5 AA2 5 PRO B 281 SER B 284 -1 O SER B 284 N GLU B 262 SHEET 1 AA3 2 THR B 151 THR B 154 0 SHEET 2 AA3 2 ASP B 268 GLU B 271 -1 O TYR B 270 N THR B 152 SHEET 1 AA4 2 LYS B 209 ASN B 211 0 SHEET 2 AA4 2 ARG A 12 SER A 14 -1 O LEU A 13 N THR B 210 SHEET 1 AA5 2 CYS B 348 TYR B 349 0 SHEET 2 AA5 2 ASP B 352 THR B 353 -1 O ASP B 352 N TYR B 349 SHEET 1 AA6 3 ILE B 355 LYS B 359 0 SHEET 2 AA6 3 LYS B 362 ILE B 366 -1 O ILE B 366 N ILE B 355 SHEET 3 AA6 3 ALA B 495 LEU B 496 -1 O ALA B 495 N ARG B 365 SHEET 1 AA7 2 GLN B 516 ARG B 521 0 SHEET 2 AA7 2 LYS B 526 ASN B 531 -1 O VAL B 529 N LYS B 518 SHEET 1 AA8 5 LEU A 86 GLU A 91 0 SHEET 2 AA8 5 LYS A 426 LYS A 430 -1 O VAL A 427 N LEU A 89 SHEET 3 AA8 5 PHE A 420 LEU A 421 -1 N PHE A 420 O TYR A 428 SHEET 4 AA8 5 ALA A 261 ASN A 265 1 N ALA A 261 O LEU A 421 SHEET 5 AA8 5 PRO A 281 SER A 284 -1 O TYR A 282 N LYS A 264 SHEET 1 AA9 2 LEU A 98 HIS A 99 0 SHEET 2 AA9 2 HIS A 102 PRO A 103 -1 O HIS A 102 N HIS A 99 SHEET 1 AB1 2 ASN A 111 ASN A 112 0 SHEET 2 AB1 2 LYS A 115 VAL A 116 -1 O LYS A 115 N ASN A 112 SHEET 1 AB2 2 THR A 151 THR A 154 0 SHEET 2 AB2 2 ASP A 268 GLU A 271 -1 O TYR A 270 N THR A 152 SHEET 1 AB3 4 ARG A 345 TYR A 349 0 SHEET 2 AB3 4 ASP A 352 LYS A 359 -1 O TYR A 356 N ARG A 345 SHEET 3 AB3 4 LYS A 362 ILE A 366 -1 O TYR A 364 N TYR A 357 SHEET 4 AB3 4 ALA A 495 LEU A 496 -1 O ALA A 495 N ARG A 365 SHEET 1 AB4 2 GLN A 516 ARG A 522 0 SHEET 2 AB4 2 GLU A 525 ASN A 531 -1 O VAL A 529 N LYS A 518 CISPEP 1 CYS B 95 GLY B 96 0 2.72 CISPEP 2 HIS B 110 ASN B 111 0 19.84 CISPEP 3 ALA B 124 GLY B 125 0 -0.04 CISPEP 4 PRO B 218 PRO B 219 0 -4.73 CISPEP 5 GLY B 602 GLY B 603 0 -9.53 CISPEP 6 ARG B 616 ASP B 617 0 -8.87 CISPEP 7 CYS A 95 GLY A 96 0 2.75 CISPEP 8 ALA A 124 GLY A 125 0 -0.25 CISPEP 9 PRO A 218 PRO A 219 0 -3.87 CISPEP 10 GLY A 602 GLY A 603 0 -1.83 SITE 1 AC1 13 ARG B 164 LYS B 278 ARG B 280 ASP B 351 SITE 2 AC1 13 ASP B 352 PHE B 370 LYS B 371 GLN B 372 SITE 3 AC1 13 LYS B 488 LEU B 513 GLY B 514 TYR B 611 SITE 4 AC1 13 PHE B 613 SITE 1 AC2 4 VAL B 440 GLY B 442 THR B 443 THR B 444 SITE 1 AC3 3 SER B 215 LYS B 264 TYR B 282 SITE 1 AC4 2 ARG A 35 LYS A 36 SITE 1 AC5 5 VAL A 440 VAL A 441 GLY A 442 THR A 443 SITE 2 AC5 5 THR A 444 SITE 1 AC6 2 THR A 210 ASN A 211 SITE 1 AC7 4 ALA A 214 SER A 215 LYS A 264 TYR A 282 SITE 1 AC8 3 ARG A 12 THR B 210 ASN B 211 CRYST1 142.513 158.339 217.096 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007017 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006316 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004606 0.00000