HEADER VIRAL PROTEIN 05-AUG-15 5D28 TITLE COMPLEX OF GM-CSF/IL-2 INHIBITION FACTOR WITH GRANULOCYTE-MACROPHAGE TITLE 2 COLONY-STIMULATING FACTOR CAVEAT 5D28 MAN E 4 HAS WRONG CHIRALITY AT ATOM C1 MAN G 4 HAS WRONG CAVEAT 2 5D28 CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GM-CSF/IL-2 INHIBITION FACTOR; COMPND 3 CHAIN: A, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR; COMPND 7 CHAIN: B, C; COMPND 8 SYNONYM: GM-CSF,COLONY-STIMULATING FACTOR,CSF; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORF VIRUS; SOURCE 3 ORGANISM_COMMON: ORFV; SOURCE 4 ORGANISM_TAXID: 10258; SOURCE 5 GENE: GIF; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 T; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: OVIS ARIES; SOURCE 11 ORGANISM_COMMON: SHEEP; SOURCE 12 ORGANISM_TAXID: 9940; SOURCE 13 GENE: CSF2; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIGNALING PROTEIN, CYTOKINE, HOST-PATHOGEN INTERACTIONS, IMMUNOLOGY, KEYWDS 2 VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.FELIX,S.N.SAVVIDES REVDAT 6 16-OCT-24 5D28 1 REMARK REVDAT 5 10-JAN-24 5D28 1 HETSYN LINK REVDAT 4 29-JUL-20 5D28 1 CAVEAT COMPND SOURCE REMARK REVDAT 4 2 1 HETNAM LINK SITE ATOM REVDAT 3 03-APR-19 5D28 1 SOURCE REVDAT 2 07-MAR-18 5D28 1 REMARK REVDAT 1 16-NOV-16 5D28 0 JRNL AUTH J.FELIX,E.KANDIAH,S.DE MUNCK,Y.BLOCH,G.C.VAN ZUNDERT, JRNL AUTH 2 K.PAUWELS,A.DANSERCOER,K.NOVANSKA,R.J.READ,A.M.BONVIN, JRNL AUTH 3 B.VERGAUWEN,K.VERSTRAETE,I.GUTSCHE,S.N.SAVVIDES JRNL TITL STRUCTURAL BASIS OF GM-CSF AND IL-2 SEQUESTRATION BY THE JRNL TITL 2 VIRAL DECOY RECEPTOR GIF. JRNL REF NAT COMMUN V. 7 13228 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 27819269 JRNL DOI 10.1038/NCOMMS13228 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1685 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.5 REMARK 3 NUMBER OF REFLECTIONS : 22384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.0683 - 5.6858 0.99 3125 162 0.1991 0.2168 REMARK 3 2 5.6858 - 4.5144 0.99 3108 167 0.1570 0.1899 REMARK 3 3 4.5144 - 3.9442 0.99 3087 162 0.1514 0.2042 REMARK 3 4 3.9442 - 3.5837 0.99 3051 166 0.1848 0.2348 REMARK 3 5 3.5837 - 3.3270 0.99 3063 161 0.2114 0.2696 REMARK 3 6 3.3270 - 3.1309 0.90 2785 146 0.2524 0.3198 REMARK 3 7 3.1309 - 2.9741 0.65 2001 117 0.2737 0.3586 REMARK 3 8 2.9741 - 2.8447 0.33 1038 45 0.3031 0.4036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5743 REMARK 3 ANGLE : 0.940 7827 REMARK 3 CHIRALITY : 0.040 912 REMARK 3 PLANARITY : 0.006 996 REMARK 3 DIHEDRAL : 11.836 2081 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 40.6418 -54.1475 -5.9087 REMARK 3 T TENSOR REMARK 3 T11: 0.0680 T22: 0.2034 REMARK 3 T33: 0.2893 T12: -0.0165 REMARK 3 T13: -0.0226 T23: -0.0852 REMARK 3 L TENSOR REMARK 3 L11: 1.0327 L22: 2.4339 REMARK 3 L33: 4.0278 L12: 0.1365 REMARK 3 L13: -0.8689 L23: -0.9845 REMARK 3 S TENSOR REMARK 3 S11: 0.1066 S12: -0.1362 S13: 0.1219 REMARK 3 S21: -0.2759 S22: -0.0421 S23: 0.1836 REMARK 3 S31: 0.1425 S32: 0.2793 S33: 0.0285 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25798 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 1.12000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.770 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5D22, 2VGA, 1CQ3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M AMMONIUM SULFATE, 0.1 M MES PH REMARK 280 6.0, 24 % PEG 4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.85000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.85000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 52.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 20 REMARK 465 ARG A 239 REMARK 465 ARG A 240 REMARK 465 PRO A 241 REMARK 465 LYS A 242 REMARK 465 ASN A 243 REMARK 465 PRO A 244 REMARK 465 VAL A 245 REMARK 465 PRO A 246 REMARK 465 ARG A 247 REMARK 465 PRO A 248 REMARK 465 GLN A 249 REMARK 465 HIS A 250 REMARK 465 VAL A 251 REMARK 465 SER A 252 REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 THR B 3 REMARK 465 ARG B 4 REMARK 465 GLN B 5 REMARK 465 PRO B 6 REMARK 465 SER B 7 REMARK 465 PRO B 8 REMARK 465 VAL B 9 REMARK 465 THR B 10 REMARK 465 ARG B 11 REMARK 465 PRO B 12 REMARK 465 TRP B 13 REMARK 465 VAL B 125 REMARK 465 GLN B 126 REMARK 465 LYS B 127 REMARK 465 ALA C 1 REMARK 465 PRO C 2 REMARK 465 THR C 3 REMARK 465 ARG C 4 REMARK 465 VAL C 125 REMARK 465 GLN C 126 REMARK 465 LYS C 127 REMARK 465 ALA D 20 REMARK 465 PHE D 178 REMARK 465 LEU D 179 REMARK 465 GLN D 180 REMARK 465 HIS D 181 REMARK 465 ARG D 239 REMARK 465 ARG D 240 REMARK 465 PRO D 241 REMARK 465 LYS D 242 REMARK 465 ASN D 243 REMARK 465 PRO D 244 REMARK 465 VAL D 245 REMARK 465 PRO D 246 REMARK 465 ARG D 247 REMARK 465 PRO D 248 REMARK 465 GLN D 249 REMARK 465 HIS D 250 REMARK 465 VAL D 251 REMARK 465 SER D 252 REMARK 465 SER D 253 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 21 CG CD OE1 NE2 REMARK 470 TRP A 22 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 22 CZ3 CH2 REMARK 470 GLU B 45 CG CD OE1 OE2 REMARK 470 MET B 46 CG SD CE REMARK 470 GLN B 50 CG CD OE1 NE2 REMARK 470 GLU B 51 CG CD OE1 OE2 REMARK 470 GLN B 92 CG CD OE1 NE2 REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 GLU B 97 CG CD OE1 OE2 REMARK 470 VAL C 35 CG1 CG2 REMARK 470 MET C 36 CG SD CE REMARK 470 GLU C 41 CG CD OE1 OE2 REMARK 470 MET C 46 CG SD CE REMARK 470 GLU C 51 CG CD OE1 OE2 REMARK 470 GLN C 92 CG CD OE1 NE2 REMARK 470 GLU C 97 CG CD OE1 OE2 REMARK 470 GLN D 21 CG CD OE1 NE2 REMARK 470 GLU D 135 CG CD OE1 OE2 REMARK 470 GLU D 177 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP C 17 OH TYR D 228 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 55 30.11 -93.33 REMARK 500 ASP A 71 171.12 62.41 REMARK 500 TYR A 132 55.38 -112.18 REMARK 500 GLU B 93 37.93 -92.70 REMARK 500 THR B 94 -61.73 -100.39 REMARK 500 TRP B 122 -145.41 -138.19 REMARK 500 GLU C 93 44.16 -91.79 REMARK 500 THR C 94 -68.09 -96.89 REMARK 500 TRP C 122 -149.79 -145.46 REMARK 500 ASP D 71 172.82 62.08 REMARK 500 TYR D 132 53.27 -110.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5D22 RELATED DB: PDB REMARK 900 5D22 CONTAINS THE SAME PROTEIN IN COMPLEX WITH THE VIRAL DECOY REMARK 900 RECEPTOR GIF. DBREF 5D28 A 20 265 UNP Q9J5U5 Q9J5U5_ORFV 20 265 DBREF 5D28 B 1 127 UNP P28773 CSF2_SHEEP 18 144 DBREF 5D28 C 1 127 UNP P28773 CSF2_SHEEP 18 144 DBREF 5D28 D 20 265 UNP Q9J5U5 Q9J5U5_ORFV 20 265 SEQRES 1 A 246 ALA GLN TRP ILE GLY GLU ARG ASP PHE CYS THR ALA HIS SEQRES 2 A 246 ALA GLN ASP VAL PHE ALA ARG LEU GLN VAL TRP MET ARG SEQRES 3 A 246 ILE ASP ARG ASN VAL THR ALA ALA ASP ASN SER SER ALA SEQRES 4 A 246 CYS ALA LEU ALA ILE GLU THR PRO PRO SER ASN PHE ASP SEQRES 5 A 246 ALA ASP VAL TYR VAL ALA ALA ALA GLY ILE ASN VAL SER SEQRES 6 A 246 VAL SER ALA ILE ASN CYS GLY PHE PHE ASN MET ARG GLN SEQRES 7 A 246 VAL GLU THR THR TYR ASN THR ALA ARG ARG GLN MET TYR SEQRES 8 A 246 VAL TYR MET ASP SER TRP ASP PRO TRP VAL ILE ASP ASP SEQRES 9 A 246 PRO GLN PRO LEU PHE SER GLN GLU TYR GLU ASN GLU THR SEQRES 10 A 246 LEU PRO TYR LEU LEU GLU VAL LEU GLU LEU ALA ARG LEU SEQRES 11 A 246 TYR ILE ARG VAL GLY CYS THR VAL PRO GLY GLU GLN PRO SEQRES 12 A 246 PHE GLU VAL ILE PRO GLY ILE ASP TYR PRO HIS THR GLY SEQRES 13 A 246 MET GLU PHE LEU GLN HIS VAL LEU ARG PRO ASN ARG ARG SEQRES 14 A 246 PHE ALA PRO ALA LYS LEU HIS MET ASP LEU GLU VAL ASP SEQRES 15 A 246 HIS ARG CYS VAL SER ALA VAL HIS VAL LYS ALA PHE LEU SEQRES 16 A 246 GLN ASP ALA CYS SER ALA ARG LYS ALA ARG THR PRO LEU SEQRES 17 A 246 TYR PHE ALA GLY HIS GLY CYS ASN HIS PRO ASP ARG ARG SEQRES 18 A 246 PRO LYS ASN PRO VAL PRO ARG PRO GLN HIS VAL SER SER SEQRES 19 A 246 PRO ILE SER ARG LYS CYS SER MET GLN THR ALA ARG SEQRES 1 B 127 ALA PRO THR ARG GLN PRO SER PRO VAL THR ARG PRO TRP SEQRES 2 B 127 GLN HIS VAL ASP ALA ILE LYS GLU ALA LEU SER LEU LEU SEQRES 3 B 127 ASN ASP SER THR ASP THR ALA ALA VAL MET ASP GLU THR SEQRES 4 B 127 VAL GLU VAL VAL SER GLU MET PHE ASP SER GLN GLU PRO SEQRES 5 B 127 THR CYS LEU GLN THR ARG LEU GLU LEU TYR LYS GLN GLY SEQRES 6 B 127 LEU ARG GLY SER LEU THR SER LEU THR GLY SER LEU THR SEQRES 7 B 127 MET MET ALA SER HIS TYR LYS LYS HIS CYS PRO PRO THR SEQRES 8 B 127 GLN GLU THR SER CYS GLU THR GLN ILE ILE THR PHE LYS SEQRES 9 B 127 SER PHE LYS GLU ASN LEU LYS ASP PHE LEU PHE ILE ILE SEQRES 10 B 127 PRO PHE ASP CYS TRP GLU PRO VAL GLN LYS SEQRES 1 C 127 ALA PRO THR ARG GLN PRO SER PRO VAL THR ARG PRO TRP SEQRES 2 C 127 GLN HIS VAL ASP ALA ILE LYS GLU ALA LEU SER LEU LEU SEQRES 3 C 127 ASN ASP SER THR ASP THR ALA ALA VAL MET ASP GLU THR SEQRES 4 C 127 VAL GLU VAL VAL SER GLU MET PHE ASP SER GLN GLU PRO SEQRES 5 C 127 THR CYS LEU GLN THR ARG LEU GLU LEU TYR LYS GLN GLY SEQRES 6 C 127 LEU ARG GLY SER LEU THR SER LEU THR GLY SER LEU THR SEQRES 7 C 127 MET MET ALA SER HIS TYR LYS LYS HIS CYS PRO PRO THR SEQRES 8 C 127 GLN GLU THR SER CYS GLU THR GLN ILE ILE THR PHE LYS SEQRES 9 C 127 SER PHE LYS GLU ASN LEU LYS ASP PHE LEU PHE ILE ILE SEQRES 10 C 127 PRO PHE ASP CYS TRP GLU PRO VAL GLN LYS SEQRES 1 D 246 ALA GLN TRP ILE GLY GLU ARG ASP PHE CYS THR ALA HIS SEQRES 2 D 246 ALA GLN ASP VAL PHE ALA ARG LEU GLN VAL TRP MET ARG SEQRES 3 D 246 ILE ASP ARG ASN VAL THR ALA ALA ASP ASN SER SER ALA SEQRES 4 D 246 CYS ALA LEU ALA ILE GLU THR PRO PRO SER ASN PHE ASP SEQRES 5 D 246 ALA ASP VAL TYR VAL ALA ALA ALA GLY ILE ASN VAL SER SEQRES 6 D 246 VAL SER ALA ILE ASN CYS GLY PHE PHE ASN MET ARG GLN SEQRES 7 D 246 VAL GLU THR THR TYR ASN THR ALA ARG ARG GLN MET TYR SEQRES 8 D 246 VAL TYR MET ASP SER TRP ASP PRO TRP VAL ILE ASP ASP SEQRES 9 D 246 PRO GLN PRO LEU PHE SER GLN GLU TYR GLU ASN GLU THR SEQRES 10 D 246 LEU PRO TYR LEU LEU GLU VAL LEU GLU LEU ALA ARG LEU SEQRES 11 D 246 TYR ILE ARG VAL GLY CYS THR VAL PRO GLY GLU GLN PRO SEQRES 12 D 246 PHE GLU VAL ILE PRO GLY ILE ASP TYR PRO HIS THR GLY SEQRES 13 D 246 MET GLU PHE LEU GLN HIS VAL LEU ARG PRO ASN ARG ARG SEQRES 14 D 246 PHE ALA PRO ALA LYS LEU HIS MET ASP LEU GLU VAL ASP SEQRES 15 D 246 HIS ARG CYS VAL SER ALA VAL HIS VAL LYS ALA PHE LEU SEQRES 16 D 246 GLN ASP ALA CYS SER ALA ARG LYS ALA ARG THR PRO LEU SEQRES 17 D 246 TYR PHE ALA GLY HIS GLY CYS ASN HIS PRO ASP ARG ARG SEQRES 18 D 246 PRO LYS ASN PRO VAL PRO ARG PRO GLN HIS VAL SER SER SEQRES 19 D 246 PRO ILE SER ARG LYS CYS SER MET GLN THR ALA ARG HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET NAG H 1 14 HET NAG H 2 14 HET NAG A 507 14 HET SO4 A 508 5 HET NAG D 507 14 HET SO4 D 508 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 10(C8 H15 N O6) FORMUL 5 BMA 2(C6 H12 O6) FORMUL 5 MAN 2(C6 H12 O6) FORMUL 10 SO4 2(O4 S 2-) FORMUL 13 HOH *17(H2 O) HELIX 1 AA1 GLY A 24 HIS A 32 1 9 HELIX 2 AA2 ASP A 117 ILE A 121 5 5 HELIX 3 AA3 TYR A 132 ALA A 147 1 16 HELIX 4 AA4 CYS A 218 LYS A 222 5 5 HELIX 5 AA5 HIS B 15 ASP B 28 1 14 HELIX 6 AA6 THR B 32 ASP B 37 1 6 HELIX 7 AA7 CYS B 54 LEU B 66 1 13 HELIX 8 AA8 ARG B 67 THR B 71 5 5 HELIX 9 AA9 SER B 72 CYS B 88 1 17 HELIX 10 AB1 PHE B 103 ILE B 117 1 15 HELIX 11 AB2 GLN C 14 ASP C 28 1 15 HELIX 12 AB3 THR C 32 ASP C 37 1 6 HELIX 13 AB4 CYS C 54 LEU C 66 1 13 HELIX 14 AB5 ARG C 67 SER C 72 5 6 HELIX 15 AB6 LEU C 73 CYS C 88 1 16 HELIX 16 AB7 PHE C 103 ILE C 117 1 15 HELIX 17 AB8 GLY D 24 HIS D 32 1 9 HELIX 18 AB9 ASP D 117 ILE D 121 5 5 HELIX 19 AC1 TYR D 132 ALA D 147 1 16 HELIX 20 AC2 CYS D 218 LYS D 222 5 5 SHEET 1 AA114 ALA A 192 LYS A 193 0 SHEET 2 AA114 TYR A 228 ASN A 235 1 O ALA A 230 N ALA A 192 SHEET 3 AA114 VAL A 205 ASP A 216 -1 N LEU A 214 O PHE A 229 SHEET 4 AA114 ALA A 38 ARG A 48 -1 N ASP A 47 O ALA A 207 SHEET 5 AA114 GLN A 108 SER A 115 -1 O MET A 109 N ILE A 46 SHEET 6 AA114 MET A 95 TYR A 102 -1 N THR A 101 O TYR A 110 SHEET 7 AA114 ARG A 257 THR A 263 -1 O CYS A 259 N THR A 100 SHEET 8 AA114 ARG D 257 THR D 263 -1 O LYS D 258 N GLN A 262 SHEET 9 AA114 MET D 95 TYR D 102 -1 N THR D 100 O CYS D 259 SHEET 10 AA114 GLN D 108 SER D 115 -1 O ASP D 114 N ARG D 96 SHEET 11 AA114 ALA D 38 ARG D 48 -1 N ILE D 46 O MET D 109 SHEET 12 AA114 VAL D 205 ASP D 216 -1 O LYS D 211 N TRP D 43 SHEET 13 AA114 TYR D 228 ASN D 235 -1 O PHE D 229 N LEU D 214 SHEET 14 AA114 ALA D 192 LYS D 193 1 N ALA D 192 O TYR D 228 SHEET 1 AA210 HIS A 195 VAL A 200 0 SHEET 2 AA210 ARG A 148 CYS A 155 1 N ILE A 151 O ASP A 197 SHEET 3 AA210 ILE A 81 PHE A 92 -1 N SER A 84 O ARG A 152 SHEET 4 AA210 PHE A 70 ALA A 78 -1 N VAL A 76 O VAL A 83 SHEET 5 AA210 CYS A 59 GLU A 64 -1 N ALA A 62 O TYR A 75 SHEET 6 AA210 CYS D 59 GLU D 64 -1 O LEU D 61 N CYS A 59 SHEET 7 AA210 PHE D 70 ALA D 78 -1 O TYR D 75 N ALA D 62 SHEET 8 AA210 ILE D 81 PHE D 92 -1 O VAL D 83 N VAL D 76 SHEET 9 AA210 ARG D 148 CYS D 155 -1 O ARG D 152 N SER D 84 SHEET 10 AA210 HIS D 195 VAL D 200 1 O GLU D 199 N VAL D 153 SHEET 1 AA3 2 THR B 39 VAL B 43 0 SHEET 2 AA3 2 THR B 98 THR B 102 -1 O ILE B 101 N VAL B 40 SHEET 1 AA4 2 THR C 39 VAL C 43 0 SHEET 2 AA4 2 THR C 98 THR C 102 -1 O ILE C 101 N VAL C 40 SSBOND 1 CYS A 29 CYS A 218 1555 1555 2.04 SSBOND 2 CYS A 59 CYS A 259 1555 1555 2.02 SSBOND 3 CYS A 155 CYS A 204 1555 1555 2.03 SSBOND 4 CYS B 54 CYS B 96 1555 1555 2.04 SSBOND 5 CYS B 88 CYS B 121 1555 1555 2.04 SSBOND 6 CYS C 54 CYS C 96 1555 1555 2.00 SSBOND 7 CYS C 88 CYS C 121 1555 1555 2.03 SSBOND 8 CYS D 29 CYS D 218 1555 1555 2.05 SSBOND 9 CYS D 59 CYS D 259 1555 1555 2.03 SSBOND 10 CYS D 155 CYS D 204 1555 1555 2.03 LINK ND2 ASN A 49 C1 NAG A 507 1555 1555 1.44 LINK ND2 ASN A 55 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN A 82 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN D 49 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN D 55 C1 NAG D 507 1555 1555 1.44 LINK ND2 ASN D 82 C1 NAG G 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 CRYST1 145.700 105.600 73.490 90.00 93.31 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006863 0.000000 0.000397 0.00000 SCALE2 0.000000 0.009470 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013630 0.00000