HEADER TRANSCRIPTION 06-AUG-15 5D3R TITLE FIRST BROMODOMAIN OF BRD4 BOUND TO INHIBITOR XD42 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIRST BROMODOMAIN, UNP RESIDUES 42-168; COMPND 5 SYNONYM: PROTEIN HUNK1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD4, HUNK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GENE REGULATION, BROMODOMAIN, INHIBITOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR D.WOHLWEND,M.HUEGLE REVDAT 3 06-SEP-17 5D3R 1 REMARK REVDAT 2 09-MAR-16 5D3R 1 JRNL REVDAT 1 20-JAN-16 5D3R 0 JRNL AUTH M.HUGLE,X.LUCAS,G.WEITZEL,D.OSTROVSKYI,B.BREIT,S.GERHARDT, JRNL AUTH 2 O.EINSLE,S.GUNTHER,D.WOHLWEND JRNL TITL 4-ACYL PYRROLE DERIVATIVES YIELD NOVEL VECTORS FOR DESIGNING JRNL TITL 2 INHIBITORS OF THE ACETYL-LYSINE RECOGNITION SITE OF BRD4(1). JRNL REF J.MED.CHEM. V. 59 1518 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 26731611 JRNL DOI 10.1021/ACS.JMEDCHEM.5B01267 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 5460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 584 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 401 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1062 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.49000 REMARK 3 B22 (A**2) : 2.21000 REMARK 3 B33 (A**2) : -1.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.582 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.256 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.204 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.698 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1125 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1072 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1533 ; 1.199 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2480 ; 0.766 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 126 ; 4.414 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 54 ;36.608 ;25.926 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 197 ;17.017 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;17.163 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 159 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1254 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 251 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 507 ; 0.148 ; 0.881 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 506 ; 0.148 ; 0.880 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 632 ; 0.272 ; 1.320 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 633 ; 0.272 ; 1.320 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 618 ; 0.354 ; 1.013 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 619 ; 0.354 ; 1.018 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 902 ; 0.653 ; 1.516 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4701 ; 1.800 ; 8.689 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4667 ; 1.667 ; 8.641 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): 22.5562 -10.8059 -19.5310 REMARK 3 T TENSOR REMARK 3 T11: 0.1146 T22: 0.1021 REMARK 3 T33: 0.1676 T12: -0.0014 REMARK 3 T13: 0.0051 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.5044 L22: 3.9720 REMARK 3 L33: 8.1299 L12: 1.3648 REMARK 3 L13: 0.6213 L23: 0.2491 REMARK 3 S TENSOR REMARK 3 S11: 0.1628 S12: -0.0622 S13: -0.1268 REMARK 3 S21: 0.4010 S22: -0.2212 S23: -0.3887 REMARK 3 S31: 0.2583 S32: 0.2444 S33: 0.0584 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 56 REMARK 3 ORIGIN FOR THE GROUP (A): 10.5809 -6.9805 -33.7345 REMARK 3 T TENSOR REMARK 3 T11: 0.1342 T22: 0.1152 REMARK 3 T33: 0.1517 T12: -0.0086 REMARK 3 T13: -0.0123 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 2.3042 L22: 0.8375 REMARK 3 L33: 11.7284 L12: -1.0372 REMARK 3 L13: 2.5017 L23: 0.6917 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: 0.3305 S13: 0.0426 REMARK 3 S21: -0.0057 S22: -0.0948 S23: -0.0057 REMARK 3 S31: 0.2465 S32: 0.6358 S33: 0.0428 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 57 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8174 -2.3142 -27.5720 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.0962 REMARK 3 T33: 0.1478 T12: -0.0723 REMARK 3 T13: -0.0154 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 3.5611 L22: 3.5119 REMARK 3 L33: 6.9659 L12: -0.9068 REMARK 3 L13: 0.5714 L23: 3.6384 REMARK 3 S TENSOR REMARK 3 S11: -0.2899 S12: 0.2619 S13: 0.2839 REMARK 3 S21: -0.3456 S22: -0.0202 S23: 0.1790 REMARK 3 S31: -0.2368 S32: -0.2810 S33: 0.3100 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8978 -0.5559 -11.2810 REMARK 3 T TENSOR REMARK 3 T11: 0.2384 T22: 0.1633 REMARK 3 T33: 0.2572 T12: -0.0942 REMARK 3 T13: 0.0597 T23: -0.1682 REMARK 3 L TENSOR REMARK 3 L11: 5.0837 L22: 0.5158 REMARK 3 L33: 4.9928 L12: -1.1633 REMARK 3 L13: 3.1559 L23: -0.9886 REMARK 3 S TENSOR REMARK 3 S11: -0.1207 S12: -0.2319 S13: 0.6325 REMARK 3 S21: 0.2339 S22: -0.1148 S23: 0.0209 REMARK 3 S31: -0.3117 S32: -0.3043 S33: 0.2356 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 94 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1386 -7.5075 -10.5549 REMARK 3 T TENSOR REMARK 3 T11: 0.1659 T22: 0.1409 REMARK 3 T33: 0.1502 T12: -0.0455 REMARK 3 T13: -0.0264 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 7.0410 L22: 0.6993 REMARK 3 L33: 2.3592 L12: -2.0428 REMARK 3 L13: 1.7353 L23: -0.0687 REMARK 3 S TENSOR REMARK 3 S11: -0.0409 S12: -0.0609 S13: -0.0102 REMARK 3 S21: 0.0399 S22: 0.0737 S23: -0.0104 REMARK 3 S31: -0.0480 S32: 0.3029 S33: -0.0328 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8220 -10.0531 -18.5994 REMARK 3 T TENSOR REMARK 3 T11: 0.0616 T22: 0.0311 REMARK 3 T33: 0.0769 T12: -0.0244 REMARK 3 T13: 0.0130 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 4.4045 L22: 2.2306 REMARK 3 L33: 5.4421 L12: -1.6045 REMARK 3 L13: 1.7262 L23: -0.0133 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: -0.0950 S13: 0.0517 REMARK 3 S21: 0.2655 S22: -0.0249 S23: -0.1160 REMARK 3 S31: 0.0134 S32: 0.2688 S33: -0.0086 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 118 A 129 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5460 -9.9413 -25.5807 REMARK 3 T TENSOR REMARK 3 T11: 0.1219 T22: 0.0493 REMARK 3 T33: 0.1086 T12: -0.0058 REMARK 3 T13: 0.0209 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.5303 L22: 0.1322 REMARK 3 L33: 8.9046 L12: 0.3799 REMARK 3 L13: -0.3011 L23: -0.6517 REMARK 3 S TENSOR REMARK 3 S11: -0.0276 S12: 0.1565 S13: 0.0088 REMARK 3 S21: -0.0115 S22: 0.0411 S23: 0.0045 REMARK 3 S31: -0.0130 S32: -0.0167 S33: -0.0135 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 130 A 137 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3077 -14.7226 -12.6890 REMARK 3 T TENSOR REMARK 3 T11: 0.1955 T22: 0.0634 REMARK 3 T33: 0.0685 T12: -0.0814 REMARK 3 T13: 0.0011 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.5564 L22: 5.0991 REMARK 3 L33: 8.9108 L12: -1.1539 REMARK 3 L13: -0.4453 L23: -6.1363 REMARK 3 S TENSOR REMARK 3 S11: -0.0933 S12: -0.2111 S13: 0.0798 REMARK 3 S21: -0.0067 S22: 0.2181 S23: 0.0511 REMARK 3 S31: 0.1941 S32: -0.1792 S33: -0.1248 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 138 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8951 -13.8925 -4.0093 REMARK 3 T TENSOR REMARK 3 T11: 0.4964 T22: 0.2228 REMARK 3 T33: 0.0700 T12: 0.0078 REMARK 3 T13: 0.0156 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 3.5129 L22: 2.3817 REMARK 3 L33: 3.9767 L12: -0.9808 REMARK 3 L13: 0.5013 L23: -1.1514 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.6761 S13: -0.0154 REMARK 3 S21: 0.8566 S22: 0.2004 S23: 0.1580 REMARK 3 S31: 0.2352 S32: 0.1286 S33: -0.1955 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9897 -7.6958 -11.8197 REMARK 3 T TENSOR REMARK 3 T11: 0.1245 T22: 0.1917 REMARK 3 T33: 0.1974 T12: -0.0382 REMARK 3 T13: 0.0146 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 9.0249 L22: 4.4492 REMARK 3 L33: 4.8149 L12: 1.0777 REMARK 3 L13: 2.9001 L23: 4.4415 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: -0.5940 S13: 0.1018 REMARK 3 S21: 0.1306 S22: -0.0255 S23: 0.0815 REMARK 3 S31: 0.1132 S32: -0.1573 S33: 0.0852 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 164 A 168 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8765 -5.8773 -26.2433 REMARK 3 T TENSOR REMARK 3 T11: 0.3375 T22: 0.2342 REMARK 3 T33: 0.3451 T12: -0.0271 REMARK 3 T13: 0.0192 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 4.6605 L22: 4.1029 REMARK 3 L33: 11.2175 L12: 4.3685 REMARK 3 L13: 7.2256 L23: 6.7825 REMARK 3 S TENSOR REMARK 3 S11: -0.1027 S12: -0.2005 S13: 0.2594 REMARK 3 S21: -0.1087 S22: -0.2196 S23: 0.1999 REMARK 3 S31: -0.1378 S32: -0.3445 S33: 0.3223 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5D3R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212623. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6065 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 15.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.14900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.45100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, BIS-TRIS, SODIUM CHLORIDE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.71500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.75500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.73000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.75500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.71500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.73000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 144 NZ LYS A 155 4545 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 57C A 201 DBREF 5D3R A 42 168 UNP O60885 BRD4_HUMAN 42 168 SEQADV 5D3R MET A 43 UNP O60885 THR 43 ENGINEERED MUTATION SEQRES 1 A 127 SER MET ASN PRO PRO PRO PRO GLU THR SER ASN PRO ASN SEQRES 2 A 127 LYS PRO LYS ARG GLN THR ASN GLN LEU GLN TYR LEU LEU SEQRES 3 A 127 ARG VAL VAL LEU LYS THR LEU TRP LYS HIS GLN PHE ALA SEQRES 4 A 127 TRP PRO PHE GLN GLN PRO VAL ASP ALA VAL LYS LEU ASN SEQRES 5 A 127 LEU PRO ASP TYR TYR LYS ILE ILE LYS THR PRO MET ASP SEQRES 6 A 127 MET GLY THR ILE LYS LYS ARG LEU GLU ASN ASN TYR TYR SEQRES 7 A 127 TRP ASN ALA GLN GLU CYS ILE GLN ASP PHE ASN THR MET SEQRES 8 A 127 PHE THR ASN CYS TYR ILE TYR ASN LYS PRO GLY ASP ASP SEQRES 9 A 127 ILE VAL LEU MET ALA GLU ALA LEU GLU LYS LEU PHE LEU SEQRES 10 A 127 GLN LYS ILE ASN GLU LEU PRO THR GLU GLU HET 57C A 201 31 HETNAM 57C 4-ACETYL-N-[3-(AZEPAN-1-YLSULFONYL)PHENYL]-5-METHYL-3- HETNAM 2 57C PROPYL-1H-PYRROLE-2-CARBOXAMIDE FORMUL 2 57C C23 H31 N3 O4 S FORMUL 3 HOH *65(H2 O) HELIX 1 AA1 THR A 60 VAL A 69 1 10 HELIX 2 AA2 VAL A 69 HIS A 77 1 9 HELIX 3 AA3 ALA A 80 GLN A 84 5 5 HELIX 4 AA4 ASP A 88 ASN A 93 1 6 HELIX 5 AA5 ASP A 96 ILE A 101 1 6 HELIX 6 AA6 ASP A 106 ASN A 116 1 11 HELIX 7 AA7 ASN A 121 ASN A 140 1 20 HELIX 8 AA8 ASP A 144 ASN A 162 1 19 SITE 1 AC1 12 LYS A 57 GLN A 59 TRP A 81 PRO A 82 SITE 2 AC1 12 PHE A 83 GLN A 85 VAL A 87 LEU A 92 SITE 3 AC1 12 ASN A 117 ASN A 140 HOH A 311 HOH A 320 CRYST1 41.430 47.460 57.510 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024137 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021070 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017388 0.00000