HEADER CELL ADHESION 10-AUG-15 5D55 TITLE CRYSTAL STRUCTURE OF THE E. COLI HDA PILUS MINOR TIP SUBUNIT, HDAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: HDAB,HDAA (ADHESIN), HUS-ASSOCIATED DIFFUSE ADHERENCE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 24-142,UNP RESIDUES 18-34,UNP RESIDUES 24-142, COMPND 5 UNP RESIDUES 18-34; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: HDAB, HDAA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIOFILM, CELL ADHESION, CHAPERONE-USHER, HDA, PILUS EXPDTA X-RAY DIFFRACTION AUTHOR W.-C.LEE,J.A.GARNETT,S.J.MATTHEWS REVDAT 3 10-JAN-24 5D55 1 REMARK REVDAT 2 28-SEP-16 5D55 1 JRNL REVDAT 1 10-AUG-16 5D55 0 JRNL AUTH W.C.LEE,S.MATTHEWS,J.A.GARNETT JRNL TITL CRYSTAL STRUCTURE AND ANALYSIS OF HDAB: THE JRNL TITL 2 ENTEROAGGREGATIVE ESCHERICHIA COLI AAF/IV PILUS TIP PROTEIN. JRNL REF PROTEIN SCI. V. 25 1898 2016 JRNL REFN ESSN 1469-896X JRNL PMID 27400770 JRNL DOI 10.1002/PRO.2982 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0062 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 23905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2654 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1628 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.3250 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.3970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2161 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 229 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.17000 REMARK 3 B22 (A**2) : 0.17000 REMARK 3 B33 (A**2) : -0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.169 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.378 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2336 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3184 ; 1.184 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 314 ; 6.142 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;36.780 ;24.086 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 363 ;13.519 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.792 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 352 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1785 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 36.3750 17.3800 0.2540 REMARK 3 T TENSOR REMARK 3 T11: 0.0747 T22: 0.0276 REMARK 3 T33: 0.0465 T12: -0.0177 REMARK 3 T13: 0.0251 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.5504 L22: 1.3457 REMARK 3 L33: 0.6949 L12: 0.8033 REMARK 3 L13: -0.3961 L23: -0.3829 REMARK 3 S TENSOR REMARK 3 S11: -0.0912 S12: -0.1678 S13: -0.0740 REMARK 3 S21: -0.0798 S22: 0.0444 S23: -0.0759 REMARK 3 S31: 0.0543 S32: -0.0375 S33: 0.0469 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7690 -3.2790 22.4930 REMARK 3 T TENSOR REMARK 3 T11: 0.0855 T22: 0.0576 REMARK 3 T33: 0.0845 T12: -0.0080 REMARK 3 T13: 0.0093 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 1.0320 L22: 5.3176 REMARK 3 L33: 6.0827 L12: 1.6374 REMARK 3 L13: -1.8220 L23: -5.0078 REMARK 3 S TENSOR REMARK 3 S11: -0.0759 S12: 0.2240 S13: 0.1342 REMARK 3 S21: -0.2095 S22: 0.3183 S23: 0.1261 REMARK 3 S31: -0.1020 S32: -0.3909 S33: -0.2425 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 119 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5550 -2.8780 29.8330 REMARK 3 T TENSOR REMARK 3 T11: 0.0178 T22: 0.0955 REMARK 3 T33: 0.0611 T12: 0.0021 REMARK 3 T13: 0.0052 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 0.9332 L22: 3.3197 REMARK 3 L33: 1.5033 L12: 0.6883 REMARK 3 L13: -0.4863 L23: -0.7597 REMARK 3 S TENSOR REMARK 3 S11: -0.0639 S12: 0.0684 S13: 0.0086 REMARK 3 S21: -0.1638 S22: 0.0854 S23: 0.0772 REMARK 3 S31: -0.0416 S32: -0.1356 S33: -0.0214 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 120 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): 37.1720 15.3510 7.3990 REMARK 3 T TENSOR REMARK 3 T11: 0.0246 T22: 0.0733 REMARK 3 T33: 0.0743 T12: 0.0184 REMARK 3 T13: -0.0108 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 3.2834 L22: 2.6192 REMARK 3 L33: 4.6466 L12: 1.8100 REMARK 3 L13: -3.4284 L23: -1.8368 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.0860 S13: 0.0380 REMARK 3 S21: 0.1389 S22: 0.1091 S23: 0.0181 REMARK 3 S31: -0.0265 S32: -0.3454 S33: -0.0746 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 5D55 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212694. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.6531 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 79.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4OR1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM CITRATE, 20% PEG 3350, REMARK 280 PH 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.82600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 56.14700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 56.14700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.23900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 56.14700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 56.14700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 15.41300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 56.14700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.14700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.23900 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 56.14700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.14700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 15.41300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 30.82600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 ASP A 122 REMARK 465 ASN A 123 REMARK 465 LYS A 124 REMARK 465 GLU A 126 REMARK 465 PHE A 127 REMARK 465 MET B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 2 OD1 OD2 REMARK 470 LYS A 9 CE NZ REMARK 470 MET A 11 CG SD CE REMARK 470 GLN A 29 CG CD OE1 NE2 REMARK 470 ASP A 30 OD2 REMARK 470 ARG A 42 CZ NH1 NH2 REMARK 470 GLU A 44 CG CD OE1 OE2 REMARK 470 LYS A 50 NZ REMARK 470 GLN A 54 CD OE1 NE2 REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LYS A 78 CD CE NZ REMARK 470 LYS A 108 NZ REMARK 470 ILE A 119 CD1 REMARK 470 ASP B 2 CG OD1 OD2 REMARK 470 LYS B 9 NZ REMARK 470 GLN B 29 CG CD OE1 NE2 REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 GLY B 46 O REMARK 470 LYS B 50 CE NZ REMARK 470 ILE B 52 CD1 REMARK 470 GLU B 57 OE2 REMARK 470 GLN B 60 CD OE1 NE2 REMARK 470 ASN B 70 CG OD1 ND2 REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 LYS B 88 NZ REMARK 470 GLU B 89 OE1 OE2 REMARK 470 ASP B 122 CG OD1 OD2 REMARK 470 ASN B 123 CG OD1 ND2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 GLN B 125 CG CD OE1 NE2 REMARK 470 GLU B 126 CG CD OE1 OE2 REMARK 470 PHE B 127 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 GLU B 143 OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 48 173.16 -55.68 REMARK 500 ASN B 123 43.44 76.92 REMARK 500 GLN B 125 -57.53 69.06 REMARK 500 GLU B 126 -119.45 62.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 412 DISTANCE = 6.03 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD B 203 DBREF 5D55 A 1 119 UNP B3V224 B3V224_ECOLX 24 142 DBREF 5D55 A 128 143 UNP Q08JP6 Q08JP6_ECOLX 19 34 DBREF 5D55 B 1 119 UNP B3V224 B3V224_ECOLX 24 142 DBREF 5D55 B 128 143 UNP Q08JP6 Q08JP6_ECOLX 19 34 SEQADV 5D55 MET A -10 UNP B3V224 INITIATING METHIONINE SEQADV 5D55 GLY A -9 UNP B3V224 EXPRESSION TAG SEQADV 5D55 SER A -8 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A -7 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A -6 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A -5 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A -4 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A -3 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A -2 UNP B3V224 EXPRESSION TAG SEQADV 5D55 GLY A -1 UNP B3V224 EXPRESSION TAG SEQADV 5D55 SER A 0 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS A 120 UNP B3V224 LINKER SEQADV 5D55 MET A 121 UNP B3V224 LINKER SEQADV 5D55 ASP A 122 UNP B3V224 LINKER SEQADV 5D55 ASN A 123 UNP B3V224 LINKER SEQADV 5D55 LYS A 124 UNP B3V224 LINKER SEQADV 5D55 GLN A 125 UNP B3V224 LINKER SEQADV 5D55 GLU A 126 UNP B3V224 LINKER SEQADV 5D55 PHE A 127 UNP B3V224 LINKER SEQADV 5D55 LYS A 144 UNP Q08JP6 EXPRESSION TAG SEQADV 5D55 LEU A 145 UNP Q08JP6 EXPRESSION TAG SEQADV 5D55 ASN A 146 UNP Q08JP6 EXPRESSION TAG SEQADV 5D55 MET B -10 UNP B3V224 INITIATING METHIONINE SEQADV 5D55 GLY B -9 UNP B3V224 EXPRESSION TAG SEQADV 5D55 SER B -8 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B -7 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B -6 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B -5 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B -4 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B -3 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B -2 UNP B3V224 EXPRESSION TAG SEQADV 5D55 GLY B -1 UNP B3V224 EXPRESSION TAG SEQADV 5D55 SER B 0 UNP B3V224 EXPRESSION TAG SEQADV 5D55 HIS B 120 UNP B3V224 LINKER SEQADV 5D55 MET B 121 UNP B3V224 LINKER SEQADV 5D55 ASP B 122 UNP B3V224 LINKER SEQADV 5D55 ASN B 123 UNP B3V224 LINKER SEQADV 5D55 LYS B 124 UNP B3V224 LINKER SEQADV 5D55 GLN B 125 UNP B3V224 LINKER SEQADV 5D55 GLU B 126 UNP B3V224 LINKER SEQADV 5D55 PHE B 127 UNP B3V224 LINKER SEQADV 5D55 LYS B 144 UNP Q08JP6 EXPRESSION TAG SEQADV 5D55 LEU B 145 UNP Q08JP6 EXPRESSION TAG SEQADV 5D55 ASN B 146 UNP Q08JP6 EXPRESSION TAG SEQRES 1 A 157 MET GLY SER HIS HIS HIS HIS HIS HIS GLY SER ALA ASP SEQRES 2 A 157 ILE THR LEU MET ASN HIS LYS TYR MET GLY ASN LEU LEU SEQRES 3 A 157 HIS ASP GLY VAL LYS LEU ALA THR GLY ARG ILE ILE CYS SEQRES 4 A 157 GLN ASP THR HIS SER GLY PHE ARG VAL TRP ILE ASN ALA SEQRES 5 A 157 ARG GLN GLU GLY GLY GLY ALA GLY LYS TYR ILE VAL GLN SEQRES 6 A 157 SER THR GLU GLY PRO GLN HIS ASN LEU ARG ILE ARG ILE SEQRES 7 A 157 GLY GLY ASN GLY TRP SER SER PHE VAL GLU LYS GLY ILE SEQRES 8 A 157 GLN GLY VAL PHE ASN THR ILE LYS GLU ASP ALA SER ILE SEQRES 9 A 157 PHE TYR ILE GLU VAL ASP GLY ASN GLN GLN VAL HIS PRO SEQRES 10 A 157 GLY LYS TYR LEU PHE SER VAL SER GLY GLU CYS TYR ILE SEQRES 11 A 157 HIS MET ASP ASN LYS GLN GLU PHE ILE PRO LEU CYS GLN SEQRES 12 A 157 ALA ALA THR ILE THR ALA GLN HIS THR VAL GLU LYS LEU SEQRES 13 A 157 ASN SEQRES 1 B 157 MET GLY SER HIS HIS HIS HIS HIS HIS GLY SER ALA ASP SEQRES 2 B 157 ILE THR LEU MET ASN HIS LYS TYR MET GLY ASN LEU LEU SEQRES 3 B 157 HIS ASP GLY VAL LYS LEU ALA THR GLY ARG ILE ILE CYS SEQRES 4 B 157 GLN ASP THR HIS SER GLY PHE ARG VAL TRP ILE ASN ALA SEQRES 5 B 157 ARG GLN GLU GLY GLY GLY ALA GLY LYS TYR ILE VAL GLN SEQRES 6 B 157 SER THR GLU GLY PRO GLN HIS ASN LEU ARG ILE ARG ILE SEQRES 7 B 157 GLY GLY ASN GLY TRP SER SER PHE VAL GLU LYS GLY ILE SEQRES 8 B 157 GLN GLY VAL PHE ASN THR ILE LYS GLU ASP ALA SER ILE SEQRES 9 B 157 PHE TYR ILE GLU VAL ASP GLY ASN GLN GLN VAL HIS PRO SEQRES 10 B 157 GLY LYS TYR LEU PHE SER VAL SER GLY GLU CYS TYR ILE SEQRES 11 B 157 HIS MET ASP ASN LYS GLN GLU PHE ILE PRO LEU CYS GLN SEQRES 12 B 157 ALA ALA THR ILE THR ALA GLN HIS THR VAL GLU LYS LEU SEQRES 13 B 157 ASN HET FLC A 201 13 HET FLC B 201 13 HET FLC B 202 13 HET IOD B 203 1 HETNAM FLC CITRATE ANION HETNAM IOD IODIDE ION FORMUL 3 FLC 3(C6 H5 O7 3-) FORMUL 6 IOD I 1- FORMUL 7 HOH *229(H2 O) SHEET 1 AA1 5 ASP A 2 ASN A 7 0 SHEET 2 AA1 5 LYS A 20 ILE A 27 -1 O THR A 23 N MET A 6 SHEET 3 AA1 5 ALA A 91 VAL A 98 -1 O PHE A 94 N GLY A 24 SHEET 4 AA1 5 GLY A 58 GLY A 68 -1 N ARG A 66 O GLU A 97 SHEET 5 AA1 5 LYS A 50 SER A 55 -1 N VAL A 53 O LEU A 63 SHEET 1 AA2 2 LEU A 14 LEU A 15 0 SHEET 2 AA2 2 GLN A 102 GLN A 103 -1 O GLN A 102 N LEU A 15 SHEET 1 AA3 4 VAL A 83 PHE A 84 0 SHEET 2 AA3 4 GLY A 34 ILE A 39 -1 N VAL A 37 O VAL A 83 SHEET 3 AA3 4 GLY A 107 TYR A 118 -1 O SER A 114 N TRP A 38 SHEET 4 AA3 4 ALA B 134 VAL B 142 -1 O VAL B 142 N GLY A 107 SHEET 1 AA4 4 ALA A 134 VAL A 142 0 SHEET 2 AA4 4 GLY B 107 MET B 121 -1 O TYR B 109 N HIS A 140 SHEET 3 AA4 4 GLY B 34 ILE B 39 -1 N ARG B 36 O GLU B 116 SHEET 4 AA4 4 VAL B 83 PHE B 84 -1 O VAL B 83 N VAL B 37 SHEET 1 AA5 3 ALA A 134 VAL A 142 0 SHEET 2 AA5 3 GLY B 107 MET B 121 -1 O TYR B 109 N HIS A 140 SHEET 3 AA5 3 GLU B 126 PRO B 129 -1 O GLU B 126 N MET B 121 SHEET 1 AA6 6 ASP B 2 ASN B 7 0 SHEET 2 AA6 6 LYS B 20 ILE B 27 -1 O THR B 23 N MET B 6 SHEET 3 AA6 6 ALA B 91 VAL B 98 -1 O PHE B 94 N GLY B 24 SHEET 4 AA6 6 ASN B 62 GLY B 68 -1 N ARG B 66 O GLU B 97 SHEET 5 AA6 6 TYR B 51 GLN B 54 -1 N VAL B 53 O LEU B 63 SHEET 6 AA6 6 ARG B 42 GLN B 43 -1 N ARG B 42 O ILE B 52 SHEET 1 AA7 2 LEU B 14 LEU B 15 0 SHEET 2 AA7 2 GLN B 102 GLN B 103 -1 O GLN B 102 N LEU B 15 SSBOND 1 CYS A 28 CYS A 117 1555 1555 2.74 SSBOND 2 CYS A 131 CYS B 131 1555 1555 2.01 SSBOND 3 CYS B 28 CYS B 117 1555 1555 2.02 CISPEP 1 GLY B 46 GLY B 47 0 -0.02 CISPEP 2 GLY B 47 ALA B 48 0 -0.01 CISPEP 3 LYS B 124 GLN B 125 0 0.01 SITE 1 AC1 4 TRP A 38 GLN A 81 HOH A 310 HOH A 322 SITE 1 AC2 4 ARG B 36 TRP B 38 GLN B 81 HOH B 370 SITE 1 AC3 4 ASN B 101 GLN B 102 GLN B 103 HOH B 303 SITE 1 AC4 4 TYR B 51 ILE B 67 HOH B 355 HOH B 413 CRYST1 112.294 112.294 61.652 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008905 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016220 0.00000