HEADER TRANSPORT PROTEIN 10-AUG-15 5D59 TITLE IN MESO X-RAY CRYSTALLOGRAPHY STRUCTURE OF THE PEPTST-ALA-PHE COMPLEX TITLE 2 AT 100 K COMPND MOL_ID: 1; COMPND 2 MOLECULE: DI-OR TRIPEPTIDE:H+ SYMPORTER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEPTST; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS THERMOPHILUS (STRAIN ATCC BAA-250 SOURCE 3 / LMG 18311); SOURCE 4 ORGANISM_TAXID: 264199; SOURCE 5 GENE: DTPT, STU0970; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.-Y.HUANG,V.OLIERIC,M.WANG,M.CAFFREY REVDAT 3 10-JAN-24 5D59 1 HETSYN REVDAT 2 02-MAR-16 5D59 1 JRNL REVDAT 1 13-JAN-16 5D59 0 JRNL AUTH C.Y.HUANG,V.OLIERIC,P.MA,N.HOWE,L.VOGELEY,X.LIU, JRNL AUTH 2 R.WARSHAMANAGE,T.WEINERT,E.PANEPUCCI,B.KOBILKA,K.DIEDERICHS, JRNL AUTH 3 M.WANG,M.CAFFREY JRNL TITL IN MESO IN SITU SERIAL X-RAY CRYSTALLOGRAPHY OF SOLUBLE AND JRNL TITL 2 MEMBRANE PROTEINS AT CRYOGENIC TEMPERATURES. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 72 93 2016 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 26894538 JRNL DOI 10.1107/S2059798315021683 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1243 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1416 - 4.9902 1.00 2717 139 0.2059 0.2115 REMARK 3 2 4.9902 - 3.9615 1.00 2594 155 0.1910 0.2189 REMARK 3 3 3.9615 - 3.4610 1.00 2600 133 0.1912 0.2275 REMARK 3 4 3.4610 - 3.1446 1.00 2584 145 0.2173 0.2533 REMARK 3 5 3.1446 - 2.9193 1.00 2579 134 0.2150 0.2245 REMARK 3 6 2.9193 - 2.7472 1.00 2563 128 0.2169 0.2501 REMARK 3 7 2.7472 - 2.6096 1.00 2582 118 0.2335 0.2576 REMARK 3 8 2.6096 - 2.4960 1.00 2534 149 0.2254 0.2925 REMARK 3 9 2.4960 - 2.3999 1.00 2541 142 0.2458 0.2866 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4059 REMARK 3 ANGLE : 1.028 5386 REMARK 3 CHIRALITY : 0.036 586 REMARK 3 PLANARITY : 0.005 631 REMARK 3 DIHEDRAL : 18.306 1492 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D59 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212671. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03321 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24537 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.410 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.36 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4D2C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 250-325 MM NH4H2PO4, 100 MM HEPES, PH REMARK 280 7.0, 21-22 %(V/V) PEG 400 AND 10 MM ALA-PHE, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.17000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.17000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.78500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.12500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.78500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.12500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.17000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.78500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.12500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.17000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.78500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.12500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 LYS A 4 REMARK 465 SER A 270 REMARK 465 SER A 271 REMARK 465 VAL A 272 REMARK 465 LYS A 273 REMARK 465 VAL A 274 REMARK 465 PRO A 405 REMARK 465 VAL A 406 REMARK 465 GLY A 407 REMARK 465 LEU A 408 REMARK 465 SER A 409 REMARK 465 VAL A 410 REMARK 465 THR A 411 REMARK 465 THR A 412 REMARK 465 LYS A 413 REMARK 465 LEU A 414 REMARK 465 ALA A 415 REMARK 465 PRO A 416 REMARK 465 LYS A 417 REMARK 465 ALA A 418 REMARK 465 PHE A 419 REMARK 465 ASN A 420 REMARK 465 SER A 421 REMARK 465 GLN A 422 REMARK 465 GLN A 476 REMARK 465 GLY A 477 REMARK 465 LEU A 478 REMARK 465 MET A 479 REMARK 465 GLN A 480 REMARK 465 GLY A 481 REMARK 465 VAL A 482 REMARK 465 GLU A 483 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 264 -71.09 -60.99 REMARK 500 VAL A 304 -68.64 -123.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ALA A 501 REMARK 610 PE5 A 525 REMARK 610 PE5 A 526 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ALA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHE A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 517 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 518 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 519 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 520 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 521 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 522 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 523 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78M A 524 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE5 A 525 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE5 A 526 DBREF 5D59 A 1 483 UNP Q5M4H8 Q5M4H8_STRT2 1 483 SEQRES 1 A 483 MET GLU ASP LYS GLY LYS THR PHE PHE GLY GLN PRO LEU SEQRES 2 A 483 GLY LEU SER THR LEU PHE MET THR GLU MET TRP GLU ARG SEQRES 3 A 483 PHE SER TYR TYR GLY MET ARG ALA ILE LEU LEU TYR TYR SEQRES 4 A 483 MET TRP PHE LEU ILE SER THR GLY ASP LEU HIS ILE THR SEQRES 5 A 483 ARG ALA THR ALA ALA SER ILE MET ALA ILE TYR ALA SER SEQRES 6 A 483 MET VAL TYR LEU SER GLY THR ILE GLY GLY PHE VAL ALA SEQRES 7 A 483 ASP ARG ILE ILE GLY ALA ARG PRO ALA VAL PHE TRP GLY SEQRES 8 A 483 GLY VAL LEU ILE MET LEU GLY HIS ILE VAL LEU ALA LEU SEQRES 9 A 483 PRO PHE GLY ALA SER ALA LEU PHE GLY SER ILE ILE LEU SEQRES 10 A 483 ILE ILE ILE GLY THR GLY PHE LEU LYS PRO ASN VAL SER SEQRES 11 A 483 THR LEU VAL GLY THR LEU TYR ASP GLU HIS ASP ARG ARG SEQRES 12 A 483 ARG ASP ALA GLY PHE SER ILE PHE VAL PHE GLY ILE ASN SEQRES 13 A 483 LEU GLY ALA PHE ILE ALA PRO LEU ILE VAL GLY ALA ALA SEQRES 14 A 483 GLN GLU ALA ALA GLY TYR HIS VAL ALA PHE SER LEU ALA SEQRES 15 A 483 ALA ILE GLY MET PHE ILE GLY LEU LEU VAL TYR TYR PHE SEQRES 16 A 483 GLY GLY LYS LYS THR LEU ASP PRO HIS TYR LEU ARG PRO SEQRES 17 A 483 THR ASP PRO LEU ALA PRO GLU GLU VAL LYS PRO LEU LEU SEQRES 18 A 483 VAL LYS VAL SER LEU ALA VAL ALA GLY PHE ILE ALA ILE SEQRES 19 A 483 ILE VAL VAL MET ASN LEU VAL GLY TRP ASN SER LEU PRO SEQRES 20 A 483 ALA TYR ILE ASN LEU LEU THR ILE VAL ALA ILE ALA ILE SEQRES 21 A 483 PRO VAL PHE TYR PHE ALA TRP MET ILE SER SER VAL LYS SEQRES 22 A 483 VAL THR SER THR GLU HIS LEU ARG VAL VAL SER TYR ILE SEQRES 23 A 483 PRO LEU PHE ILE ALA ALA VAL LEU PHE TRP ALA ILE GLU SEQRES 24 A 483 GLU GLN GLY SER VAL VAL LEU ALA THR PHE ALA ALA GLU SEQRES 25 A 483 ARG VAL ASP SER SER TRP PHE PRO VAL SER TRP PHE GLN SEQRES 26 A 483 SER LEU ASN PRO LEU PHE ILE MET LEU TYR THR PRO PHE SEQRES 27 A 483 PHE ALA TRP LEU TRP THR ALA TRP LYS LYS ASN GLN PRO SEQRES 28 A 483 SER SER PRO THR LYS PHE ALA VAL GLY LEU MET PHE ALA SEQRES 29 A 483 GLY LEU SER PHE LEU LEU MET ALA ILE PRO GLY ALA LEU SEQRES 30 A 483 TYR GLY THR SER GLY LYS VAL SER PRO LEU TRP LEU VAL SEQRES 31 A 483 GLY SER TRP ALA LEU VAL ILE LEU GLY GLU MET LEU ILE SEQRES 32 A 483 SER PRO VAL GLY LEU SER VAL THR THR LYS LEU ALA PRO SEQRES 33 A 483 LYS ALA PHE ASN SER GLN MET MET SER MET TRP PHE LEU SEQRES 34 A 483 SER SER SER VAL GLY SER ALA LEU ASN ALA GLN LEU VAL SEQRES 35 A 483 THR LEU TYR ASN ALA LYS SER GLU VAL ALA TYR PHE SER SEQRES 36 A 483 TYR PHE GLY LEU GLY SER VAL VAL LEU GLY ILE VAL LEU SEQRES 37 A 483 VAL PHE LEU SER LYS ARG ILE GLN GLY LEU MET GLN GLY SEQRES 38 A 483 VAL GLU HET ALA A 501 5 HET PHE A 502 12 HET 78M A 503 22 HET 78M A 504 22 HET 78M A 505 22 HET 78M A 506 22 HET 78M A 507 22 HET 78M A 508 22 HET 78M A 509 22 HET 78M A 510 22 HET 78M A 511 22 HET 78M A 512 22 HET 78M A 513 22 HET 78M A 514 22 HET 78M A 515 22 HET PO4 A 516 5 HET 78M A 517 22 HET 78M A 518 22 HET 78M A 519 22 HET 78M A 520 22 HET 78M A 521 22 HET 78M A 522 22 HET 78M A 523 22 HET 78M A 524 22 HET PE5 A 525 8 HET PE5 A 526 11 HETNAM ALA ALANINE HETNAM PHE PHENYLALANINE HETNAM 78M (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE HETNAM PO4 PHOSPHATE ION HETNAM PE5 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL HETSYN 78M 7.8 MONOACYLGLYCEROL HETSYN PE5 2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETSYN 2 PE5 ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL; POLYETHYLENE HETSYN 3 PE5 GLYCOL PEG400 FORMUL 2 ALA C3 H7 N O2 FORMUL 3 PHE C9 H11 N O2 FORMUL 4 78M 21(C18 H34 O4) FORMUL 17 PO4 O4 P 3- FORMUL 26 PE5 2(C18 H38 O9) FORMUL 28 HOH *75(H2 O) HELIX 1 AA1 LEU A 13 THR A 46 1 34 HELIX 2 AA2 THR A 52 SER A 70 1 19 HELIX 3 AA3 SER A 70 ILE A 81 1 12 HELIX 4 AA4 GLY A 83 LEU A 104 1 22 HELIX 5 AA5 GLY A 107 SER A 109 5 3 HELIX 6 AA6 ALA A 110 THR A 135 1 26 HELIX 7 AA7 ARG A 143 GLY A 174 1 32 HELIX 8 AA8 GLY A 174 LEU A 201 1 28 HELIX 9 AA9 ASP A 202 ARG A 207 5 6 HELIX 10 AB1 ALA A 213 GLU A 215 5 3 HELIX 11 AB2 GLU A 216 VAL A 241 1 26 HELIX 12 AB3 SER A 245 ILE A 269 1 25 HELIX 13 AB4 SER A 276 SER A 284 1 9 HELIX 14 AB5 TYR A 285 GLN A 301 1 17 HELIX 15 AB6 VAL A 304 VAL A 314 1 11 HELIX 16 AB7 PRO A 320 GLN A 325 5 6 HELIX 17 AB8 SER A 326 TRP A 346 1 21 HELIX 18 AB9 SER A 352 GLY A 379 1 28 HELIX 19 AC1 PRO A 386 SER A 404 1 19 HELIX 20 AC2 MET A 424 VAL A 442 1 19 HELIX 21 AC3 THR A 443 TYR A 445 5 3 HELIX 22 AC4 SER A 449 LEU A 471 1 23 SITE 1 AC1 5 ASN A 156 GLU A 299 ASN A 328 GLU A 400 SITE 2 AC1 5 PHE A 502 SITE 1 AC2 7 ARG A 26 TYR A 30 TYR A 68 LYS A 126 SITE 2 AC2 7 ILE A 155 TRP A 427 ALA A 501 SITE 1 AC3 4 MET A 238 TRP A 243 ALA A 248 ASN A 251 SITE 1 AC4 6 LEU A 212 PRO A 214 LEU A 221 ALA A 376 SITE 2 AC4 6 78M A 505 78M A 506 SITE 1 AC5 6 LEU A 369 LEU A 370 ALA A 376 VAL A 451 SITE 2 AC5 6 78M A 504 78M A 519 SITE 1 AC6 5 LEU A 212 LEU A 220 VAL A 224 78M A 504 SITE 2 AC6 5 78M A 523 SITE 1 AC7 7 MET A 96 ALA A 173 VAL A 177 PHE A 195 SITE 2 AC7 7 78M A 522 PE5 A 525 HOH A 601 SITE 1 AC8 8 SER A 385 LEU A 387 TRP A 388 GLY A 391 SITE 2 AC8 8 LEU A 395 78M A 512 HOH A 649 HOH A 663 SITE 1 AC9 3 LEU A 444 TYR A 453 PHE A 457 SITE 1 AD1 7 VAL A 101 PHE A 106 ILE A 120 VAL A 469 SITE 2 AD1 7 PHE A 470 78M A 519 78M A 523 SITE 1 AD2 3 TRP A 318 PHE A 319 PRO A 386 SITE 1 AD3 8 LYS A 218 VAL A 222 SER A 225 ILE A 232 SITE 2 AD3 8 TYR A 378 TRP A 388 78M A 508 78M A 518 SITE 1 AD4 8 ARG A 85 PRO A 86 PHE A 89 TRP A 90 SITE 2 AD4 8 LEU A 97 TYR A 194 78M A 522 HOH A 611 SITE 1 AD5 5 ILE A 115 ILE A 116 LEU A 246 LEU A 253 SITE 2 AD5 5 78M A 515 SITE 1 AD6 5 THR A 72 ILE A 73 ILE A 119 ILE A 260 SITE 2 AD6 5 78M A 514 SITE 1 AD7 5 ASP A 48 PHE A 106 GLY A 107 ALA A 108 SITE 2 AD7 5 SER A 109 SITE 1 AD8 5 PHE A 289 LEU A 437 GLN A 440 THR A 443 SITE 2 AD8 5 78M A 520 SITE 1 AD9 3 VAL A 222 LEU A 226 78M A 512 SITE 1 AE1 6 SER A 455 TYR A 456 LEU A 459 ILE A 466 SITE 2 AE1 6 78M A 505 78M A 510 SITE 1 AE2 7 ILE A 255 ILE A 258 VAL A 262 PHE A 263 SITE 2 AE2 7 TRP A 267 GLN A 440 78M A 517 SITE 1 AE3 3 PHE A 231 ILE A 235 TYR A 249 SITE 1 AE4 5 MET A 96 PHE A 187 TYR A 194 78M A 507 SITE 2 AE4 5 78M A 513 SITE 1 AE5 5 THR A 72 ILE A 73 PHE A 76 78M A 506 SITE 2 AE5 5 78M A 510 SITE 1 AE6 6 PHE A 9 SER A 149 ILE A 150 PHE A 153 SITE 2 AE6 6 LEU A 157 TRP A 323 SITE 1 AE7 4 GLY A 174 TYR A 175 HIS A 176 78M A 507 SITE 1 AE8 8 TYR A 38 TRP A 41 PHE A 42 SER A 45 SITE 2 AE8 8 ARG A 53 GLN A 170 TYR A 175 HOH A 655 CRYST1 101.570 110.250 110.340 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009845 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009070 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009063 0.00000