HEADER ISOMERASE/ISOMERASE INHIBITOR 13-AUG-15 5D7D TITLE CRYSTAL STRUCTURE OF THE ATP BINDING DOMAIN OF S. AUREUS GYRB TITLE 2 COMPLEXED WITH A LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA GYRASE SUBUNIT B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ATP BINDING DOMAIN, UNP RESIDUES 2-234 (DELTA 105-127); COMPND 5 EC: 5.99.1.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: GYRB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24 KEYWDS DNA GYRASE, GYRB, LIGAND, STRUCTURE-BASED DESIGN, ISOMERASE-ISOMERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.ZHANG,Q.YANG,J.B.CROSS,J.A.C.ROMERO,M.D.RYAN,B.LIPPA,R.E.DOLLE, AUTHOR 2 O.A.ANDERSEN,J.BARKER,R.K.CHENG,J.KAHMANN,B.FELICETTI,M.WOOD, AUTHOR 3 C.SCHEICH REVDAT 3 27-SEP-23 5D7D 1 LINK REVDAT 2 22-NOV-17 5D7D 1 REMARK REVDAT 1 11-NOV-15 5D7D 0 JRNL AUTH J.ZHANG,Q.YANG,J.A.ROMERO,J.CROSS,B.WANG,K.M.POUTSIAKA, JRNL AUTH 2 F.EPIE,D.BEVAN,Y.WU,T.MOY,A.DANIEL,B.CHAMBERLAIN,N.CARTER, JRNL AUTH 3 J.SHOTWELL,A.ARYA,V.KUMAR,J.SILVERMAN,K.NGUYEN,C.A.METCALF, JRNL AUTH 4 D.RYAN,B.LIPPA,R.E.DOLLE JRNL TITL DISCOVERY OF INDAZOLE DERIVATIVES AS A NOVEL CLASS OF JRNL TITL 2 BACTERIAL GYRASE B INHIBITORS. JRNL REF ACS MED.CHEM.LETT. V. 6 1080 2015 JRNL REFN ISSN 1948-5875 JRNL PMID 26487916 JRNL DOI 10.1021/ACSMEDCHEMLETT.5B00266 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 48608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2607 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3153 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.3870 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.4650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3076 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.43000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.088 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.087 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.486 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3396 ; 0.026 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3246 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4639 ; 2.527 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7475 ; 1.189 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 433 ; 6.358 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;40.949 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 614 ;15.582 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;18.186 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 515 ; 0.147 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3906 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 786 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1584 ; 2.237 ; 2.310 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1583 ; 2.220 ; 2.308 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1984 ; 3.322 ; 3.448 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 230 REMARK 3 ORIGIN FOR THE GROUP (A): -9.1451 -28.2493 8.6411 REMARK 3 T TENSOR REMARK 3 T11: 0.0195 T22: 0.0388 REMARK 3 T33: 0.0162 T12: 0.0166 REMARK 3 T13: -0.0151 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.1863 L22: 0.0963 REMARK 3 L33: 0.1770 L12: 0.1332 REMARK 3 L13: 0.1314 L23: 0.0908 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: -0.0121 S13: 0.0281 REMARK 3 S21: -0.0027 S22: -0.0164 S23: 0.0211 REMARK 3 S31: -0.0002 S32: 0.0052 S33: 0.0188 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5D7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51220 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 2.680 REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.44 REMARK 200 R MERGE FOR SHELL (I) : 0.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 10.2.35 REMARK 200 STARTING MODEL: 1KZN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40-43% MPD_P1K_P3350, 100 MM MOPS/NA REMARK 280 -HEPES, 100 MM DIVALENTS, PH 7.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.65000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.72300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.65000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.72300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 LEU A 5 REMARK 465 SER A 6 REMARK 465 ASP A 7 REMARK 465 VAL A 8 REMARK 465 ASN A 9 REMARK 465 ASN A 10 REMARK 465 THR A 11 REMARK 465 ASP A 12 REMARK 465 ASN A 13 REMARK 465 TYR A 14 REMARK 465 GLY A 231 REMARK 465 GLY A 232 REMARK 465 ILE A 233 REMARK 465 LYS A 234 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 VAL B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 LEU B 5 REMARK 465 SER B 6 REMARK 465 ASP B 7 REMARK 465 VAL B 8 REMARK 465 ASN B 9 REMARK 465 ASN B 10 REMARK 465 THR B 11 REMARK 465 ASP B 12 REMARK 465 ASN B 13 REMARK 465 TYR B 14 REMARK 465 GLY B 15 REMARK 465 ALA B 16 REMARK 465 GLY B 17 REMARK 465 GLN B 18 REMARK 465 ILE B 19 REMARK 465 GLY B 232 REMARK 465 ILE B 233 REMARK 465 LYS B 234 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 63 CG TYR A 63 CD1 -0.094 REMARK 500 GLU A 139 CD GLU A 139 OE2 0.083 REMARK 500 GLU A 216 CD GLU A 216 OE2 -0.071 REMARK 500 TRP B 49 CE2 TRP B 49 CD2 -0.082 REMARK 500 ARG B 223 CZ ARG B 223 NH1 0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 57 CB - CG - OD1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 57 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 161 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 218 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 223 NE - CZ - NH1 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG A 223 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG B 31 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 TYR B 63 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP B 89 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 169 CB - CG - OD1 ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG B 198 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 214 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 223 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 65 10.30 -141.64 REMARK 500 ASN A 82 40.76 -101.66 REMARK 500 ASN A 206 72.03 -108.08 REMARK 500 GLU B 92 46.43 -90.15 REMARK 500 LYS B 93 -67.85 -172.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 92 LYS B 93 -136.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR A 63 -10.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 306 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 50 OE1 REMARK 620 2 HOH A 469 O 73.2 REMARK 620 3 HOH A 499 O 114.5 81.8 REMARK 620 4 HOH A 521 O 92.2 121.9 149.5 REMARK 620 5 HOH A 531 O 160.1 94.6 78.2 80.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 305 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 54 OD1 REMARK 620 2 HOH A 446 O 79.2 REMARK 620 3 HOH A 469 O 87.2 107.3 REMARK 620 4 HOH A 499 O 88.4 150.5 98.6 REMARK 620 5 HOH A 531 O 168.2 98.6 104.5 88.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 ASP A 57 OD1 0.0 REMARK 620 3 HOH A 446 O 67.0 67.0 REMARK 620 4 HOH A 446 O 104.0 104.0 96.8 REMARK 620 5 HOH A 516 O 83.5 83.5 68.6 159.8 REMARK 620 6 HOH A 516 O 111.4 111.4 171.5 91.6 103.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 300 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 450 O REMARK 620 2 HOH A 475 O 92.8 REMARK 620 3 ASP B 53 OD1 130.7 58.7 REMARK 620 4 ASP B 53 OD2 130.5 56.9 1.9 REMARK 620 5 ASP B 57 OD2 137.3 61.8 6.6 7.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 305 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 54 OD1 REMARK 620 2 HOH B 408 O 84.3 REMARK 620 3 HOH B 449 O 82.2 92.4 REMARK 620 4 HOH B 492 O 84.2 168.2 88.7 REMARK 620 5 HOH B 493 O 78.5 100.8 155.4 74.2 REMARK 620 6 HOH B 540 O 165.4 109.9 99.6 81.4 95.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 306 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 82 O REMARK 620 2 GLY B 83 O 76.6 REMARK 620 3 THR B 171 O 86.5 72.2 REMARK 620 4 THR B 171 OG1 158.9 83.4 80.8 REMARK 620 5 HOH B 467 O 84.9 78.9 151.0 98.1 REMARK 620 6 HOH B 479 O 131.9 135.9 131.2 68.3 72.8 REMARK 620 7 HOH B 508 O 80.2 155.0 115.8 120.5 89.9 58.3 REMARK 620 8 HOH B 510 O 107.3 141.9 70.3 84.2 138.7 69.9 55.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 307 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 208 O REMARK 620 2 HOH B 462 O 78.2 REMARK 620 3 HOH B 483 O 85.9 162.4 REMARK 620 4 HOH B 521 O 160.2 84.5 109.5 REMARK 620 5 HOH B 524 O 105.3 91.9 99.8 84.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 57X A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 57X B 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CPH RELATED DB: PDB REMARK 900 RELATED ID: 5CTU RELATED DB: PDB REMARK 900 RELATED ID: 5CTW RELATED DB: PDB REMARK 900 RELATED ID: 5CTX RELATED DB: PDB REMARK 900 RELATED ID: 5CTY RELATED DB: PDB REMARK 900 RELATED ID: 5D6P RELATED DB: PDB REMARK 900 RELATED ID: 5D6Q RELATED DB: PDB REMARK 900 RELATED ID: 5D7C RELATED DB: PDB REMARK 900 RELATED ID: 5D7R RELATED DB: PDB DBREF 5D7D A 2 234 UNP P0A0K8 GYRB_STAAU 2 234 DBREF 5D7D B 2 234 UNP P0A0K8 GYRB_STAAU 2 234 SEQADV 5D7D GLY A 0 UNP P0A0K8 EXPRESSION TAG SEQADV 5D7D SER A 1 UNP P0A0K8 EXPRESSION TAG SEQADV 5D7D A UNP P0A0K8 VAL 105 DELETION SEQADV 5D7D A UNP P0A0K8 LEU 106 DELETION SEQADV 5D7D A UNP P0A0K8 HIS 107 DELETION SEQADV 5D7D A UNP P0A0K8 ALA 108 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 109 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 110 DELETION SEQADV 5D7D A UNP P0A0K8 LYS 111 DELETION SEQADV 5D7D A UNP P0A0K8 PHE 112 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 113 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 114 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 115 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 116 DELETION SEQADV 5D7D A UNP P0A0K8 TYR 117 DELETION SEQADV 5D7D A UNP P0A0K8 LYS 118 DELETION SEQADV 5D7D A UNP P0A0K8 VAL 119 DELETION SEQADV 5D7D A UNP P0A0K8 SER 120 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 121 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 122 DELETION SEQADV 5D7D A UNP P0A0K8 LEU 123 DELETION SEQADV 5D7D A UNP P0A0K8 HIS 124 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 125 DELETION SEQADV 5D7D A UNP P0A0K8 VAL 126 DELETION SEQADV 5D7D A UNP P0A0K8 GLY 127 DELETION SEQADV 5D7D GLY B 0 UNP P0A0K8 EXPRESSION TAG SEQADV 5D7D SER B 1 UNP P0A0K8 EXPRESSION TAG SEQADV 5D7D B UNP P0A0K8 VAL 105 DELETION SEQADV 5D7D B UNP P0A0K8 LEU 106 DELETION SEQADV 5D7D B UNP P0A0K8 HIS 107 DELETION SEQADV 5D7D B UNP P0A0K8 ALA 108 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 109 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 110 DELETION SEQADV 5D7D B UNP P0A0K8 LYS 111 DELETION SEQADV 5D7D B UNP P0A0K8 PHE 112 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 113 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 114 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 115 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 116 DELETION SEQADV 5D7D B UNP P0A0K8 TYR 117 DELETION SEQADV 5D7D B UNP P0A0K8 LYS 118 DELETION SEQADV 5D7D B UNP P0A0K8 VAL 119 DELETION SEQADV 5D7D B UNP P0A0K8 SER 120 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 121 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 122 DELETION SEQADV 5D7D B UNP P0A0K8 LEU 123 DELETION SEQADV 5D7D B UNP P0A0K8 HIS 124 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 125 DELETION SEQADV 5D7D B UNP P0A0K8 VAL 126 DELETION SEQADV 5D7D B UNP P0A0K8 GLY 127 DELETION SEQRES 1 A 212 GLY SER VAL THR ALA LEU SER ASP VAL ASN ASN THR ASP SEQRES 2 A 212 ASN TYR GLY ALA GLY GLN ILE GLN VAL LEU GLU GLY LEU SEQRES 3 A 212 GLU ALA VAL ARG LYS ARG PRO GLY MET TYR ILE GLY SER SEQRES 4 A 212 THR SER GLU ARG GLY LEU HIS HIS LEU VAL TRP GLU ILE SEQRES 5 A 212 VAL ASP ASN SER ILE ASP GLU ALA LEU ALA GLY TYR ALA SEQRES 6 A 212 ASN GLN ILE GLU VAL VAL ILE GLU LYS ASP ASN TRP ILE SEQRES 7 A 212 LYS VAL THR ASP ASN GLY ARG GLY ILE PRO VAL ASP ILE SEQRES 8 A 212 GLN GLU LYS MET GLY ARG PRO ALA VAL GLU VAL ILE LEU SEQRES 9 A 212 THR SER SER VAL VAL ASN ALA LEU SER GLN ASP LEU GLU SEQRES 10 A 212 VAL TYR VAL HIS ARG ASN GLU THR ILE TYR HIS GLN ALA SEQRES 11 A 212 TYR LYS LYS GLY VAL PRO GLN PHE ASP LEU LYS GLU VAL SEQRES 12 A 212 GLY THR THR ASP LYS THR GLY THR VAL ILE ARG PHE LYS SEQRES 13 A 212 ALA ASP GLY GLU ILE PHE THR GLU THR THR VAL TYR ASN SEQRES 14 A 212 TYR GLU THR LEU GLN GLN ARG ILE ARG GLU LEU ALA PHE SEQRES 15 A 212 LEU ASN LYS GLY ILE GLN ILE THR LEU ARG ASP GLU ARG SEQRES 16 A 212 ASP GLU GLU ASN VAL ARG GLU ASP SER TYR HIS TYR GLU SEQRES 17 A 212 GLY GLY ILE LYS SEQRES 1 B 212 GLY SER VAL THR ALA LEU SER ASP VAL ASN ASN THR ASP SEQRES 2 B 212 ASN TYR GLY ALA GLY GLN ILE GLN VAL LEU GLU GLY LEU SEQRES 3 B 212 GLU ALA VAL ARG LYS ARG PRO GLY MET TYR ILE GLY SER SEQRES 4 B 212 THR SER GLU ARG GLY LEU HIS HIS LEU VAL TRP GLU ILE SEQRES 5 B 212 VAL ASP ASN SER ILE ASP GLU ALA LEU ALA GLY TYR ALA SEQRES 6 B 212 ASN GLN ILE GLU VAL VAL ILE GLU LYS ASP ASN TRP ILE SEQRES 7 B 212 LYS VAL THR ASP ASN GLY ARG GLY ILE PRO VAL ASP ILE SEQRES 8 B 212 GLN GLU LYS MET GLY ARG PRO ALA VAL GLU VAL ILE LEU SEQRES 9 B 212 THR SER SER VAL VAL ASN ALA LEU SER GLN ASP LEU GLU SEQRES 10 B 212 VAL TYR VAL HIS ARG ASN GLU THR ILE TYR HIS GLN ALA SEQRES 11 B 212 TYR LYS LYS GLY VAL PRO GLN PHE ASP LEU LYS GLU VAL SEQRES 12 B 212 GLY THR THR ASP LYS THR GLY THR VAL ILE ARG PHE LYS SEQRES 13 B 212 ALA ASP GLY GLU ILE PHE THR GLU THR THR VAL TYR ASN SEQRES 14 B 212 TYR GLU THR LEU GLN GLN ARG ILE ARG GLU LEU ALA PHE SEQRES 15 B 212 LEU ASN LYS GLY ILE GLN ILE THR LEU ARG ASP GLU ARG SEQRES 16 B 212 ASP GLU GLU ASN VAL ARG GLU ASP SER TYR HIS TYR GLU SEQRES 17 B 212 GLY GLY ILE LYS HET MPD A 301 8 HET MPD A 302 8 HET CL A 303 1 HET MG A 304 1 HET MG A 305 1 HET MG A 306 1 HET 57X A 307 24 HET MG A 300 1 HET MPD B 302 8 HET MPD B 303 8 HET CL B 304 1 HET MG B 305 1 HET MG B 306 1 HET MG B 307 1 HET 57X B 308 24 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM 57X 7-PROPYL-3-[2-(PYRIDIN-3-YL)-1,3-THIAZOL-5-YL]-1,7- HETNAM 2 57X DIHYDRO-6H-PYRAZOLO[3,4-B]PYRIDIN-6-ONE FORMUL 3 MPD 4(C6 H14 O2) FORMUL 5 CL 2(CL 1-) FORMUL 6 MG 7(MG 2+) FORMUL 9 57X 2(C17 H15 N5 O S) FORMUL 18 HOH *290(H2 O) HELIX 1 AA1 GLY A 15 ARG A 31 1 17 HELIX 2 AA2 ARG A 31 GLY A 37 1 7 HELIX 3 AA3 SER A 40 ALA A 61 1 22 HELIX 4 AA4 LYS A 73 ASN A 75 5 3 HELIX 5 AA5 ALA A 98 SER A 128 1 8 HELIX 6 AA6 SER A 129 LEU A 134 1 6 HELIX 7 AA7 ASN A 191 ASN A 206 1 16 HELIX 8 AA8 VAL B 21 ARG B 31 1 11 HELIX 9 AA9 PRO B 32 GLY B 37 1 6 HELIX 10 AB1 SER B 40 ALA B 61 1 22 HELIX 11 AB2 PRO B 97 SER B 128 1 9 HELIX 12 AB3 SER B 129 LEU B 134 1 6 HELIX 13 AB4 ASN B 191 ASN B 206 1 16 SHEET 1 AA1 3 VAL A 157 PRO A 158 0 SHEET 2 AA1 3 THR A 147 LYS A 154 -1 N LYS A 154 O VAL A 157 SHEET 3 AA1 3 LYS A 163 THR A 167 -1 O VAL A 165 N ILE A 148 SHEET 1 AA2 8 VAL A 157 PRO A 158 0 SHEET 2 AA2 8 THR A 147 LYS A 154 -1 N LYS A 154 O VAL A 157 SHEET 3 AA2 8 SER A 135 ARG A 144 -1 N VAL A 140 O GLN A 151 SHEET 4 AA2 8 GLY A 172 ALA A 179 -1 O ARG A 176 N GLU A 139 SHEET 5 AA2 8 TRP A 76 ASP A 81 -1 N VAL A 79 O ILE A 175 SHEET 6 AA2 8 GLN A 66 GLU A 72 -1 N VAL A 70 O LYS A 78 SHEET 7 AA2 8 GLN A 210 ASP A 215 1 O THR A 212 N VAL A 69 SHEET 8 AA2 8 ARG A 223 TYR A 227 -1 O ARG A 223 N ASP A 215 SHEET 1 AA3 2 ILE A 90 GLN A 91 0 SHEET 2 AA3 2 ARG A 96 PRO A 97 -1 O ARG A 96 N GLN A 91 SHEET 1 AA4 3 VAL B 157 PRO B 158 0 SHEET 2 AA4 3 THR B 147 LYS B 154 -1 N LYS B 154 O VAL B 157 SHEET 3 AA4 3 LYS B 163 THR B 167 -1 O VAL B 165 N ILE B 148 SHEET 1 AA5 8 VAL B 157 PRO B 158 0 SHEET 2 AA5 8 THR B 147 LYS B 154 -1 N LYS B 154 O VAL B 157 SHEET 3 AA5 8 SER B 135 ARG B 144 -1 N VAL B 140 O GLN B 151 SHEET 4 AA5 8 GLY B 172 ALA B 179 -1 O ARG B 176 N GLU B 139 SHEET 5 AA5 8 TRP B 76 ASP B 81 -1 N VAL B 79 O ILE B 175 SHEET 6 AA5 8 GLN B 66 ILE B 71 -1 N VAL B 70 O LYS B 78 SHEET 7 AA5 8 GLN B 210 ASP B 215 1 O THR B 212 N VAL B 69 SHEET 8 AA5 8 ARG B 223 TYR B 227 -1 O ASP B 225 N LEU B 213 LINK OE1 GLU A 50 MG MG A 306 1555 1555 2.45 LINK OD1 ASN A 54 MG MG A 305 1555 1555 2.22 LINK OD1 ASP A 57 MG MG A 304 1555 1555 2.18 LINK OD1 ASP A 57 MG MG A 304 1555 2556 2.31 LINK MG MG A 300 O HOH A 450 1555 1555 2.59 LINK MG MG A 300 O HOH A 475 1555 1555 2.20 LINK MG MG A 300 OD1BASP B 53 2555 1555 2.63 LINK MG MG A 300 OD2BASP B 53 2555 1555 2.51 LINK MG MG A 300 OD2 ASP B 57 2555 1555 2.64 LINK MG MG A 304 O HOH A 446 1555 1555 2.74 LINK MG MG A 304 O HOH A 446 1555 2556 2.18 LINK MG MG A 304 O HOH A 516 1555 1555 2.76 LINK MG MG A 304 O HOH A 516 1555 2556 2.14 LINK MG MG A 305 O HOH A 446 1555 1555 2.00 LINK MG MG A 305 O HOH A 469 1555 1555 2.12 LINK MG MG A 305 O HOH A 499 1555 1555 2.11 LINK MG MG A 305 O HOH A 531 1555 1555 2.18 LINK MG MG A 306 O HOH A 469 1555 1555 2.39 LINK MG MG A 306 O HOH A 499 1555 1555 2.49 LINK MG MG A 306 O HOH A 521 1555 1555 2.22 LINK MG MG A 306 O HOH A 531 1555 1555 2.23 LINK OD1 ASN B 54 MG MG B 305 1555 1555 2.32 LINK O ASN B 82 MG MG B 306 1555 1555 2.35 LINK O GLY B 83 MG MG B 306 1555 1555 2.59 LINK O THR B 171 MG MG B 306 1555 1555 2.53 LINK OG1 THR B 171 MG MG B 306 1555 1555 2.30 LINK O GLY B 208 MG MG B 307 1555 1555 2.51 LINK MG MG B 305 O HOH B 408 1555 1555 2.02 LINK MG MG B 305 O HOH B 449 1555 1555 2.22 LINK MG MG B 305 O HOH B 492 1555 1555 2.05 LINK MG MG B 305 O HOH B 493 1555 1555 2.32 LINK MG MG B 305 O HOH B 540 1555 1555 2.09 LINK MG MG B 306 O HOH B 467 1555 1555 2.44 LINK MG MG B 306 O HOH B 479 1555 1555 2.74 LINK MG MG B 306 O HOH B 508 1555 1555 2.40 LINK MG MG B 306 O HOH B 510 1555 1555 2.93 LINK MG MG B 307 O HOH B 462 1555 1555 2.24 LINK MG MG B 307 O HOH B 483 1555 1555 2.26 LINK MG MG B 307 O HOH B 521 1555 1555 2.02 LINK MG MG B 307 O HOH B 524 1555 1555 2.06 SITE 1 AC1 6 ASP A 81 HIS A 143 LYS A 170 THR A 171 SITE 2 AC1 6 MPD A 302 HOH A 413 SITE 1 AC2 3 TYR A 141 HIS A 143 MPD A 301 SITE 1 AC3 4 VAL A 88 ARG A 144 ASN A 145 HOH A 523 SITE 1 AC4 4 ASP A 57 MG A 305 HOH A 446 HOH A 516 SITE 1 AC5 9 ASP A 53 ASN A 54 ASP A 57 MG A 304 SITE 2 AC5 9 MG A 306 HOH A 446 HOH A 469 HOH A 499 SITE 3 AC5 9 HOH A 531 SITE 1 AC6 6 GLU A 50 MG A 305 HOH A 469 HOH A 499 SITE 2 AC6 6 HOH A 521 HOH A 531 SITE 1 AC7 13 ASN A 54 SER A 55 GLU A 58 VAL A 79 SITE 2 AC7 13 ASP A 81 ARG A 84 GLY A 85 ILE A 86 SITE 3 AC7 13 PRO A 87 ARG A 144 THR A 173 ILE A 175 SITE 4 AC7 13 HOH A 442 SITE 1 AC8 5 LYS A 163 HOH A 450 HOH A 475 ASP B 53 SITE 2 AC8 5 ASP B 57 SITE 1 AC9 5 THR B 80 ASP B 81 LYS B 170 MPD B 303 SITE 2 AC9 5 HOH B 416 SITE 1 AD1 5 HIS B 143 VAL B 174 GLU B 186 MPD B 302 SITE 2 AD1 5 HOH B 486 SITE 1 AD2 5 VAL B 88 ASP B 89 ARG B 144 ASN B 145 SITE 2 AD2 5 HOH B 455 SITE 1 AD3 6 ASN B 54 HOH B 408 HOH B 449 HOH B 492 SITE 2 AD3 6 HOH B 493 HOH B 540 SITE 1 AD4 7 ASN B 82 GLY B 83 THR B 171 HOH B 467 SITE 2 AD4 7 HOH B 479 HOH B 508 HOH B 510 SITE 1 AD5 6 GLY B 208 HIS B 228 HOH B 462 HOH B 483 SITE 2 AD5 6 HOH B 521 HOH B 524 SITE 1 AD6 15 THR A 185 ASN B 54 SER B 55 GLU B 58 SITE 2 AD6 15 VAL B 79 ASP B 81 ARG B 84 GLY B 85 SITE 3 AD6 15 ILE B 86 PRO B 87 ARG B 144 THR B 173 SITE 4 AD6 15 ILE B 175 HOH B 435 HOH B 502 CRYST1 143.300 55.446 51.029 90.00 100.95 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006978 0.000000 0.001350 0.00000 SCALE2 0.000000 0.018036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019960 0.00000