HEADER IMMUNE SYSTEM 14-AUG-15 5D7K TITLE STRUCTURE OF MR1-REACTIVE MAV36 TCR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAV36 TCR ALPHA CHAIN; COMPND 3 CHAIN: D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MAV36 TCR BETA CHAIN; COMPND 7 CHAIN: E; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 GENE: TRBV/TRBC; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RECEPTOR, ANTIGEN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.N.KELLER,J.ROSSJOHN REVDAT 3 27-SEP-23 5D7K 1 JRNL REMARK REVDAT 2 03-FEB-16 5D7K 1 JRNL REVDAT 1 27-JAN-16 5D7K 0 JRNL AUTH N.A.GHERARDIN,A.N.KELLER,R.E.WOOLLEY,J.LE NOURS,D.S.RITCHIE, JRNL AUTH 2 P.J.NEESON,R.W.BIRKINSHAW,S.B.ECKLE,J.N.WADDINGTON,L.LIU, JRNL AUTH 3 D.P.FAIRLIE,A.P.ULDRICH,D.G.PELLICCI,J.MCCLUSKEY, JRNL AUTH 4 D.I.GODFREY,J.ROSSJOHN JRNL TITL DIVERSITY OF T CELLS RESTRICTED BY THE MHC CLASS I-RELATED JRNL TITL 2 MOLECULE MR1 FACILITATES DIFFERENTIAL ANTIGEN RECOGNITION. JRNL REF IMMUNITY V. 44 32 2016 JRNL REFN ISSN 1074-7613 JRNL PMID 26795251 JRNL DOI 10.1016/J.IMMUNI.2015.12.005 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 53671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3603 - 5.0674 1.00 2788 178 0.1712 0.2276 REMARK 3 2 5.0674 - 4.0231 1.00 2754 126 0.1312 0.1547 REMARK 3 3 4.0231 - 3.5148 1.00 2731 123 0.1388 0.1636 REMARK 3 4 3.5148 - 3.1935 1.00 2669 149 0.1488 0.1734 REMARK 3 5 3.1935 - 2.9647 1.00 2714 138 0.1618 0.1906 REMARK 3 6 2.9647 - 2.7899 1.00 2653 160 0.1683 0.2080 REMARK 3 7 2.7899 - 2.6502 1.00 2709 127 0.1780 0.2244 REMARK 3 8 2.6502 - 2.5349 1.00 2663 145 0.1845 0.2280 REMARK 3 9 2.5349 - 2.4373 1.00 2700 113 0.1782 0.2415 REMARK 3 10 2.4373 - 2.3532 1.00 2689 142 0.1707 0.2115 REMARK 3 11 2.3532 - 2.2796 1.00 2671 135 0.1692 0.1845 REMARK 3 12 2.2796 - 2.2145 1.00 2675 117 0.1677 0.2247 REMARK 3 13 2.2145 - 2.1562 1.00 2644 156 0.1700 0.2041 REMARK 3 14 2.1562 - 2.1036 1.00 2659 154 0.1756 0.1805 REMARK 3 15 2.1036 - 2.0558 1.00 2631 153 0.1824 0.2149 REMARK 3 16 2.0558 - 2.0120 1.00 2648 147 0.1951 0.2346 REMARK 3 17 2.0120 - 1.9718 1.00 2641 174 0.2095 0.2480 REMARK 3 18 1.9718 - 1.9346 1.00 2685 109 0.2226 0.2380 REMARK 3 19 1.9346 - 1.9000 1.00 2663 138 0.2604 0.3122 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3533 REMARK 3 ANGLE : 1.127 4808 REMARK 3 CHIRALITY : 0.052 538 REMARK 3 PLANARITY : 0.005 624 REMARK 3 DIHEDRAL : 13.281 1256 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4559 -69.3718 0.7725 REMARK 3 T TENSOR REMARK 3 T11: 0.1113 T22: 0.1780 REMARK 3 T33: 0.1385 T12: -0.0482 REMARK 3 T13: 0.0032 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.5135 L22: 1.8613 REMARK 3 L33: 3.7894 L12: -0.0065 REMARK 3 L13: 0.0072 L23: -0.6267 REMARK 3 S TENSOR REMARK 3 S11: 0.0429 S12: -0.1773 S13: -0.0925 REMARK 3 S21: 0.1947 S22: 0.0160 S23: -0.0862 REMARK 3 S31: 0.0017 S32: 0.3402 S33: -0.0530 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 103 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9874 -60.1422 -20.0398 REMARK 3 T TENSOR REMARK 3 T11: 0.1095 T22: 0.2131 REMARK 3 T33: 0.1505 T12: -0.0203 REMARK 3 T13: 0.0463 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 3.9617 L22: 2.7644 REMARK 3 L33: 5.9451 L12: -2.3092 REMARK 3 L13: 4.2139 L23: -3.4131 REMARK 3 S TENSOR REMARK 3 S11: 0.3274 S12: 0.3537 S13: -0.0629 REMARK 3 S21: -0.3871 S22: -0.2399 S23: 0.0234 REMARK 3 S31: 0.3474 S32: 0.3115 S33: -0.1009 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 117 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9683 -48.3916 -23.5012 REMARK 3 T TENSOR REMARK 3 T11: 0.1033 T22: 0.2444 REMARK 3 T33: 0.1710 T12: -0.0476 REMARK 3 T13: -0.0033 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 3.0949 L22: 3.8826 REMARK 3 L33: 2.8159 L12: 0.6501 REMARK 3 L13: -0.7057 L23: 0.0837 REMARK 3 S TENSOR REMARK 3 S11: 0.0675 S12: 0.1691 S13: 0.3633 REMARK 3 S21: -0.0360 S22: 0.0515 S23: -0.0581 REMARK 3 S31: -0.2949 S32: 0.1698 S33: -0.0896 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 2 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4014 -57.5631 7.6186 REMARK 3 T TENSOR REMARK 3 T11: 0.3366 T22: 0.2886 REMARK 3 T33: 0.2716 T12: 0.0395 REMARK 3 T13: -0.0475 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 5.5014 L22: 9.9480 REMARK 3 L33: 4.2933 L12: -0.1276 REMARK 3 L13: 0.1451 L23: -0.7953 REMARK 3 S TENSOR REMARK 3 S11: -0.0011 S12: -0.1180 S13: -0.8091 REMARK 3 S21: -0.1427 S22: -0.0662 S23: 0.2324 REMARK 3 S31: 0.6961 S32: -0.1092 S33: 0.0597 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 15 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5544 -62.3566 16.1318 REMARK 3 T TENSOR REMARK 3 T11: 0.1392 T22: 0.1656 REMARK 3 T33: 0.1600 T12: -0.0104 REMARK 3 T13: 0.0586 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 1.8086 L22: 3.4969 REMARK 3 L33: 3.0054 L12: -0.7373 REMARK 3 L13: 0.1596 L23: 0.6307 REMARK 3 S TENSOR REMARK 3 S11: -0.1584 S12: -0.2153 S13: -0.2847 REMARK 3 S21: 0.0902 S22: -0.0629 S23: 0.1719 REMARK 3 S31: 0.0635 S32: -0.1459 S33: 0.1715 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 108 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1954 -43.5303 5.4384 REMARK 3 T TENSOR REMARK 3 T11: 0.2898 T22: 0.1756 REMARK 3 T33: 0.1607 T12: 0.0510 REMARK 3 T13: -0.0222 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 2.4480 L22: 2.2177 REMARK 3 L33: 3.2888 L12: 0.2577 REMARK 3 L13: 1.6860 L23: 1.0909 REMARK 3 S TENSOR REMARK 3 S11: -0.4410 S12: -0.2129 S13: 0.4629 REMARK 3 S21: 0.4355 S22: 0.1483 S23: -0.1406 REMARK 3 S31: -0.7793 S32: -0.2789 S33: 0.2402 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 123 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1465 -53.5493 -15.7050 REMARK 3 T TENSOR REMARK 3 T11: 0.0673 T22: 0.1634 REMARK 3 T33: 0.1211 T12: -0.0322 REMARK 3 T13: -0.0111 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.8422 L22: 1.6691 REMARK 3 L33: 3.2724 L12: -0.2446 REMARK 3 L13: -0.2604 L23: 1.1288 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: 0.0907 S13: 0.0511 REMARK 3 S21: 0.0977 S22: 0.0774 S23: -0.0081 REMARK 3 S31: 0.0018 S32: 0.1125 S33: -0.0385 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 214 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9851 -47.5280 -2.1332 REMARK 3 T TENSOR REMARK 3 T11: 0.1391 T22: 0.2481 REMARK 3 T33: 0.2078 T12: 0.0224 REMARK 3 T13: 0.0391 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.5090 L22: 2.9453 REMARK 3 L33: 5.0530 L12: 0.3498 REMARK 3 L13: 1.1183 L23: 1.5666 REMARK 3 S TENSOR REMARK 3 S11: -0.1404 S12: -0.3829 S13: 0.3278 REMARK 3 S21: 0.4500 S22: -0.1927 S23: 0.3405 REMARK 3 S31: -0.1042 S32: -0.5931 S33: 0.3081 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D7K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212771. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53709 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 67.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.14700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 1.28600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4DZB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BTP, PEG 3350, NAAC, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.90667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.45333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.45333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.90667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 465 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET D 0 REMARK 465 SER D 127 REMARK 465 ASP D 128 REMARK 465 PRO D 200 REMARK 465 GLU D 201 REMARK 465 SER D 202 REMARK 465 SER D 203 REMARK 465 MET E 0 REMARK 465 ASP E 1 REMARK 465 ASP E 243 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU D 1 CG CD OE1 OE2 REMARK 470 ASP D 2 CG OD1 OD2 REMARK 470 LYS D 3 CG CD CE NZ REMARK 470 GLU D 26 CG CD OE1 OE2 REMARK 470 ARG D 31 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 40 CG CD CE NZ REMARK 470 LYS D 41 CG CD CE NZ REMARK 470 LYS D 68 CG CD CE NZ REMARK 470 GLN D 112 CG CD OE1 NE2 REMARK 470 ARG D 122 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 125 CG CD CE NZ REMARK 470 GLN D 145 CG CD OE1 NE2 REMARK 470 LYS D 147 CG CD CE NZ REMARK 470 LYS D 177 CD CE NZ REMARK 470 LYS E 3 CG CD CE NZ REMARK 470 ASP E 26 CG OD1 OD2 REMARK 470 GLU E 69 CG CD OE1 OE2 REMARK 470 LYS E 70 CG CD CE NZ REMARK 470 GLU E 218 CG CD OE1 OE2 REMARK 470 GLU E 221 CG CD OE1 OE2 REMARK 470 ASP E 225 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 355 O HOH D 500 1.84 REMARK 500 O HOH E 608 O HOH E 637 1.84 REMARK 500 O HOH E 402 O HOH E 575 1.91 REMARK 500 O HOH D 390 O HOH D 467 1.92 REMARK 500 O HOH E 513 O HOH E 616 1.96 REMARK 500 OD1 ASP E 152 O HOH E 401 1.98 REMARK 500 O HOH D 371 O HOH D 452 1.98 REMARK 500 O HOH D 332 O HOH D 429 2.02 REMARK 500 O HOH E 601 O HOH E 652 2.02 REMARK 500 O HOH D 472 O HOH D 474 2.06 REMARK 500 NH1 ARG E 109 O HOH E 402 2.07 REMARK 500 O HOH E 408 O HOH E 615 2.07 REMARK 500 NE2 GLN E 201 O HOH E 403 2.09 REMARK 500 O SER D 199 O HOH D 301 2.11 REMARK 500 O HOH E 422 O HOH E 603 2.12 REMARK 500 O HOH E 465 O HOH E 471 2.14 REMARK 500 OE1 GLU E 123 O HOH E 404 2.14 REMARK 500 O HOH E 584 O HOH E 657 2.15 REMARK 500 O HOH E 599 O HOH E 676 2.17 REMARK 500 O HOH D 382 O HOH D 462 2.17 REMARK 500 NE2 GLN D 38 O HOH D 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 485 O HOH E 566 3545 1.88 REMARK 500 O HOH E 421 O HOH E 599 3545 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS D 41 -73.09 69.86 REMARK 500 LEU D 46 -65.01 -108.87 REMARK 500 THR D 94 -8.27 75.44 REMARK 500 LYS D 125 -82.75 -87.08 REMARK 500 LYS E 3 -74.15 -103.71 REMARK 500 SER E 7 -165.11 -57.78 REMARK 500 ASP E 26 44.46 -109.84 REMARK 500 LYS E 53 12.40 58.33 REMARK 500 HIS E 153 78.55 -115.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 695 DISTANCE = 6.43 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5D5M RELATED DB: PDB REMARK 900 RELATED ID: 5D7I RELATED DB: PDB REMARK 900 RELATED ID: 5D7J RELATED DB: PDB REMARK 900 RELATED ID: 5D7L RELATED DB: PDB DBREF 5D7K D 0 203 PDB 5D7K 5D7K 0 203 DBREF 5D7K E 0 243 PDB 5D7K 5D7K 0 243 SEQRES 1 D 204 MET GLU ASP LYS VAL VAL GLN SER PRO LEU SER LEU VAL SEQRES 2 D 204 VAL HIS GLU GLY ASP THR VAL THR LEU ASN CYS SER TYR SEQRES 3 D 204 GLU VAL THR ASN PHE ARG SER LEU LEU TRP TYR LYS GLN SEQRES 4 D 204 GLU LYS LYS ALA PRO THR PHE LEU PHE MET LEU THR SER SEQRES 5 D 204 SER GLY ILE GLU LYS LYS SER GLY ARG LEU SER SER ILE SEQRES 6 D 204 LEU ASP LYS LYS GLU LEU SER SER ILE LEU ASN ILE THR SEQRES 7 D 204 ALA THR GLN THR GLY ASP SER ALA ILE TYR LEU CYS ALA SEQRES 8 D 204 ALA TYR ASN THR ASP LYS LEU ILE PHE GLY THR GLY THR SEQRES 9 D 204 ARG LEU GLN VAL PHE PRO ASN ILE GLN ASN PRO ASP PRO SEQRES 10 D 204 ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SEQRES 11 D 204 SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN SEQRES 12 D 204 VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP SEQRES 13 D 204 LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER SEQRES 14 D 204 ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA SEQRES 15 D 204 CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP SEQRES 16 D 204 THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 E 244 MET ASP VAL LYS VAL THR GLN SER SER ARG TYR LEU VAL SEQRES 2 E 244 LYS ARG THR GLY GLU LYS VAL PHE LEU GLU CYS VAL GLN SEQRES 3 E 244 ASP MET ASP HIS GLU ASN MET PHE TRP TYR ARG GLN ASP SEQRES 4 E 244 PRO GLY LEU GLY LEU ARG LEU ILE TYR PHE SER TYR ASP SEQRES 5 E 244 VAL LYS MET LYS GLU LYS GLY ASP ILE PRO GLU GLY TYR SEQRES 6 E 244 SER VAL SER ARG GLU LYS LYS GLU ARG PHE SER LEU ILE SEQRES 7 E 244 LEU GLU SER ALA SER THR ASN GLN THR SER MET TYR LEU SEQRES 8 E 244 CYS ALA SER SER PRO SER GLY TYR GLN GLU THR GLN TYR SEQRES 9 E 244 PHE GLY PRO GLY THR ARG LEU LEU VAL LEU GLU ASP LEU SEQRES 10 E 244 LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SEQRES 11 E 244 SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU SEQRES 12 E 244 VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU SEQRES 13 E 244 LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY SEQRES 14 E 244 VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA SEQRES 15 E 244 LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG SEQRES 16 E 244 VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE SEQRES 17 E 244 ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP SEQRES 18 E 244 GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE SEQRES 19 E 244 VAL SER ALA GLU ALA TRP GLY ARG ALA ASP HET SO4 E 301 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *514(H2 O) HELIX 1 AA1 GLN D 80 SER D 84 5 5 HELIX 2 AA2 ARG D 162 ASP D 165 5 4 HELIX 3 AA3 ALA D 181 PHE D 186 1 6 HELIX 4 AA4 SER E 82 THR E 86 5 5 HELIX 5 AA5 SER E 130 GLN E 138 1 9 HELIX 6 AA6 ALA E 197 GLN E 201 1 5 SHEET 1 AA1 5 LYS D 3 SER D 7 0 SHEET 2 AA1 5 VAL D 19 GLU D 26 -1 O ASN D 22 N SER D 7 SHEET 3 AA1 5 SER D 71 ILE D 76 -1 O LEU D 74 N LEU D 21 SHEET 4 AA1 5 LEU D 61 ASP D 66 -1 N SER D 62 O ASN D 75 SHEET 5 AA1 5 LYS D 56 SER D 58 -1 N SER D 58 O LEU D 61 SHEET 1 AA2 5 SER D 10 HIS D 14 0 SHEET 2 AA2 5 THR D 103 PHE D 108 1 O PHE D 108 N VAL D 13 SHEET 3 AA2 5 ALA D 85 TYR D 92 -1 N ALA D 85 O LEU D 105 SHEET 4 AA2 5 SER D 32 GLN D 38 -1 N LEU D 34 O ALA D 90 SHEET 5 AA2 5 THR D 44 LEU D 49 -1 O LEU D 49 N LEU D 33 SHEET 1 AA3 4 SER D 10 HIS D 14 0 SHEET 2 AA3 4 THR D 103 PHE D 108 1 O PHE D 108 N VAL D 13 SHEET 3 AA3 4 ALA D 85 TYR D 92 -1 N ALA D 85 O LEU D 105 SHEET 4 AA3 4 LEU D 97 PHE D 99 -1 O ILE D 98 N ALA D 91 SHEET 1 AA4 8 TYR D 152 ILE D 153 0 SHEET 2 AA4 8 PHE D 166 TRP D 174 -1 O TRP D 174 N TYR D 152 SHEET 3 AA4 8 SER D 130 THR D 135 -1 N CYS D 132 O ALA D 173 SHEET 4 AA4 8 ALA D 117 ASP D 123 -1 N TYR D 119 O LEU D 133 SHEET 5 AA4 8 GLU E 123 GLU E 128 -1 O GLU E 128 N ARG D 122 SHEET 6 AA4 8 LYS E 139 PHE E 149 -1 O VAL E 143 N PHE E 127 SHEET 7 AA4 8 TYR E 187 SER E 196 -1 O LEU E 193 N LEU E 142 SHEET 8 AA4 8 VAL E 169 THR E 171 -1 N CYS E 170 O ARG E 192 SHEET 1 AA5 8 CYS D 157 MET D 161 0 SHEET 2 AA5 8 PHE D 166 TRP D 174 -1 O PHE D 166 N MET D 161 SHEET 3 AA5 8 SER D 130 THR D 135 -1 N CYS D 132 O ALA D 173 SHEET 4 AA5 8 ALA D 117 ASP D 123 -1 N TYR D 119 O LEU D 133 SHEET 5 AA5 8 GLU E 123 GLU E 128 -1 O GLU E 128 N ARG D 122 SHEET 6 AA5 8 LYS E 139 PHE E 149 -1 O VAL E 143 N PHE E 127 SHEET 7 AA5 8 TYR E 187 SER E 196 -1 O LEU E 193 N LEU E 142 SHEET 8 AA5 8 LEU E 176 LYS E 177 -1 N LEU E 176 O ALA E 188 SHEET 1 AA6 4 VAL E 4 GLN E 6 0 SHEET 2 AA6 4 VAL E 19 GLN E 25 -1 O VAL E 24 N THR E 5 SHEET 3 AA6 4 ARG E 73 LEU E 78 -1 O LEU E 76 N LEU E 21 SHEET 4 AA6 4 TYR E 64 LYS E 70 -1 N SER E 65 O ILE E 77 SHEET 1 AA7 6 TYR E 10 ARG E 14 0 SHEET 2 AA7 6 THR E 108 LEU E 113 1 O LEU E 113 N LYS E 13 SHEET 3 AA7 6 SER E 87 SER E 94 -1 N TYR E 89 O THR E 108 SHEET 4 AA7 6 ASN E 31 ASP E 38 -1 N TYR E 35 O LEU E 90 SHEET 5 AA7 6 GLY E 42 SER E 49 -1 O ILE E 46 N TRP E 34 SHEET 6 AA7 6 GLU E 56 LYS E 57 -1 O GLU E 56 N PHE E 48 SHEET 1 AA8 4 TYR E 10 ARG E 14 0 SHEET 2 AA8 4 THR E 108 LEU E 113 1 O LEU E 113 N LYS E 13 SHEET 3 AA8 4 SER E 87 SER E 94 -1 N TYR E 89 O THR E 108 SHEET 4 AA8 4 TYR E 103 PHE E 104 -1 O TYR E 103 N SER E 93 SHEET 1 AA9 4 LYS E 163 VAL E 165 0 SHEET 2 AA9 4 VAL E 154 VAL E 160 -1 N VAL E 160 O LYS E 163 SHEET 3 AA9 4 HIS E 206 PHE E 213 -1 O ARG E 208 N TRP E 159 SHEET 4 AA9 4 GLN E 232 TRP E 239 -1 O GLN E 232 N PHE E 213 SSBOND 1 CYS D 23 CYS D 89 1555 1555 2.05 SSBOND 2 CYS D 132 CYS D 182 1555 1555 2.06 SSBOND 3 CYS D 157 CYS E 170 1555 1555 2.03 SSBOND 4 CYS E 23 CYS E 91 1555 1555 2.05 SSBOND 5 CYS E 144 CYS E 209 1555 1555 2.02 CISPEP 1 SER D 7 PRO D 8 0 -6.08 CISPEP 2 SER D 7 PRO D 8 0 -2.12 CISPEP 3 TYR E 150 PRO E 151 0 -4.42 SITE 1 AC1 5 ARG E 9 TYR E 10 MET E 88 ARG E 109 SITE 2 AC1 5 HOH E 520 CRYST1 135.439 135.439 64.360 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007383 0.004263 0.000000 0.00000 SCALE2 0.000000 0.008526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015538 0.00000