data_5D8H # _entry.id 5D8H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.307 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5D8H WWPDB D_1000212833 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'CRYSTAL STRUCTURE OF FRAGMENT OF RIBOSOMAL PROTEIN P0 IN COMPLEX WITH 74NT 23S RNA FROM METHANOCOCCUS JANNASCHII' 5D6G unspecified PDB 'RIBOSOMAL PROTEIN L11 FROM METHANOCOCCUS JANNASCHII' 5COL unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5D8H _pdbx_database_status.recvd_initial_deposition_date 2015-08-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gabdulkhakov, A.G.' 1 ? 'Mitroshin, I.V.' 2 ? 'Garber, M.B.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII WITH ANTIBIOTIC THIOSTREPTON' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gabdulkhakov, A.G.' 1 ? primary 'Mitroshin, I.V.' 2 ? primary 'Garber, M.B.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5D8H _cell.details ? _cell.formula_units_Z ? _cell.length_a 125.070 _cell.length_a_esd ? _cell.length_b 127.160 _cell.length_b_esd ? _cell.length_c 132.930 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '23S ribosomal RNA' 23928.295 1 ? ? ? ? 2 polymer man '50S ribosomal protein L10' 23635.162 1 ? 'Met changed to SeMet' 'UNP residues 9-221' ? 3 polymer man '50S ribosomal protein L11' 17794.695 1 ? ? ? ? 4 polymer nat THIOSTREPTON 1805.985 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 11 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 7 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 3 ? ? ? ? 8 water nat water 18.015 65 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Acidic ribosomal protein P0 homolog,MjaL10' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GCCUAAGACAGCGGGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAACAGCUCACCCGUCGAGGC GCCUAAGACAGCGGGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAACAGCUCACCCGUCGAGGC A ? 2 'polypeptide(L)' no yes ;(MSE)APWKIEEVKTLKGLIKSKPVVAIVD(MSE)(MSE)DVPAPQLQEIRDKIRDKVKLR(MSE)SRNTLIIRALKEAA EELNNPKLAELANYVERGAAILVTD(MSE)NPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTG(MSE)PPGPFLGEL KSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADI ; ;MAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVE RGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVK KGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADI ; B ? 3 'polypeptide(L)' no yes ;(MSE)AKEVVEVLVTGGRATAGPPLGPAIGPLGVNV(MSE)QVVKEINEKTKDYEG(MSE)QVPVKVIVDTETRKFEIEV GIPPTTALIKKELGIETAAHEPRHEVVGNLTLEQVIKIAK(MSE)KKDA(MSE)LSYTLKNAVKEVLGTCGS(MSE)GVT VEGKDPKEVQKEIDAGVYDEYFKEE ; ;MAKEVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRKFEIEVGIPPTTALIKKE LGIETAAHEPRHEVVGNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAGVYDEYFKE E ; C ? 4 'polypeptide(L)' no yes '(QUA)IA(DHA)AS(BB9)T(DBU)(DCY)(TS9)(BB9)T(BB9)(MH6)(BB9)(DHA)(DHA)(NH2)' XIASASCTTCICTCSCSSX D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 C n 1 4 U n 1 5 A n 1 6 A n 1 7 G n 1 8 A n 1 9 C n 1 10 A n 1 11 G n 1 12 C n 1 13 G n 1 14 G n 1 15 G n 1 16 G n 1 17 A n 1 18 G n 1 19 G n 1 20 U n 1 21 U n 1 22 G n 1 23 G n 1 24 C n 1 25 U n 1 26 U n 1 27 A n 1 28 G n 1 29 A n 1 30 A n 1 31 G n 1 32 C n 1 33 A n 1 34 G n 1 35 C n 1 36 C n 1 37 A n 1 38 U n 1 39 C n 1 40 C n 1 41 U n 1 42 U n 1 43 U n 1 44 A n 1 45 A n 1 46 A n 1 47 G n 1 48 A n 1 49 G n 1 50 U n 1 51 G n 1 52 C n 1 53 G n 1 54 U n 1 55 A n 1 56 A n 1 57 C n 1 58 A n 1 59 G n 1 60 C n 1 61 U n 1 62 C n 1 63 A n 1 64 C n 1 65 C n 1 66 C n 1 67 G n 1 68 U n 1 69 C n 1 70 G n 1 71 A n 1 72 G n 1 73 G n 1 74 C n 2 1 MSE n 2 2 ALA n 2 3 PRO n 2 4 TRP n 2 5 LYS n 2 6 ILE n 2 7 GLU n 2 8 GLU n 2 9 VAL n 2 10 LYS n 2 11 THR n 2 12 LEU n 2 13 LYS n 2 14 GLY n 2 15 LEU n 2 16 ILE n 2 17 LYS n 2 18 SER n 2 19 LYS n 2 20 PRO n 2 21 VAL n 2 22 VAL n 2 23 ALA n 2 24 ILE n 2 25 VAL n 2 26 ASP n 2 27 MSE n 2 28 MSE n 2 29 ASP n 2 30 VAL n 2 31 PRO n 2 32 ALA n 2 33 PRO n 2 34 GLN n 2 35 LEU n 2 36 GLN n 2 37 GLU n 2 38 ILE n 2 39 ARG n 2 40 ASP n 2 41 LYS n 2 42 ILE n 2 43 ARG n 2 44 ASP n 2 45 LYS n 2 46 VAL n 2 47 LYS n 2 48 LEU n 2 49 ARG n 2 50 MSE n 2 51 SER n 2 52 ARG n 2 53 ASN n 2 54 THR n 2 55 LEU n 2 56 ILE n 2 57 ILE n 2 58 ARG n 2 59 ALA n 2 60 LEU n 2 61 LYS n 2 62 GLU n 2 63 ALA n 2 64 ALA n 2 65 GLU n 2 66 GLU n 2 67 LEU n 2 68 ASN n 2 69 ASN n 2 70 PRO n 2 71 LYS n 2 72 LEU n 2 73 ALA n 2 74 GLU n 2 75 LEU n 2 76 ALA n 2 77 ASN n 2 78 TYR n 2 79 VAL n 2 80 GLU n 2 81 ARG n 2 82 GLY n 2 83 ALA n 2 84 ALA n 2 85 ILE n 2 86 LEU n 2 87 VAL n 2 88 THR n 2 89 ASP n 2 90 MSE n 2 91 ASN n 2 92 PRO n 2 93 PHE n 2 94 LYS n 2 95 LEU n 2 96 TYR n 2 97 LYS n 2 98 LEU n 2 99 LEU n 2 100 GLU n 2 101 GLU n 2 102 ASN n 2 103 LYS n 2 104 SER n 2 105 PRO n 2 106 ALA n 2 107 PRO n 2 108 VAL n 2 109 ARG n 2 110 GLY n 2 111 GLY n 2 112 GLN n 2 113 ILE n 2 114 ALA n 2 115 PRO n 2 116 CYS n 2 117 ASP n 2 118 ILE n 2 119 LYS n 2 120 VAL n 2 121 GLU n 2 122 LYS n 2 123 GLY n 2 124 SER n 2 125 THR n 2 126 GLY n 2 127 MSE n 2 128 PRO n 2 129 PRO n 2 130 GLY n 2 131 PRO n 2 132 PHE n 2 133 LEU n 2 134 GLY n 2 135 GLU n 2 136 LEU n 2 137 LYS n 2 138 SER n 2 139 VAL n 2 140 GLY n 2 141 ILE n 2 142 PRO n 2 143 ALA n 2 144 ALA n 2 145 ILE n 2 146 GLU n 2 147 LYS n 2 148 GLY n 2 149 LYS n 2 150 ILE n 2 151 ALA n 2 152 ILE n 2 153 LYS n 2 154 GLU n 2 155 ASP n 2 156 LYS n 2 157 VAL n 2 158 VAL n 2 159 VAL n 2 160 LYS n 2 161 LYS n 2 162 GLY n 2 163 GLU n 2 164 VAL n 2 165 VAL n 2 166 SER n 2 167 PRO n 2 168 LYS n 2 169 LEU n 2 170 ALA n 2 171 ALA n 2 172 VAL n 2 173 LEU n 2 174 ASP n 2 175 ARG n 2 176 LEU n 2 177 GLY n 2 178 ILE n 2 179 LYS n 2 180 PRO n 2 181 ILE n 2 182 LYS n 2 183 VAL n 2 184 GLY n 2 185 LEU n 2 186 ASN n 2 187 ILE n 2 188 LEU n 2 189 ALA n 2 190 VAL n 2 191 TYR n 2 192 GLU n 2 193 ASP n 2 194 GLY n 2 195 ILE n 2 196 ILE n 2 197 TYR n 2 198 THR n 2 199 PRO n 2 200 ASP n 2 201 VAL n 2 202 LEU n 2 203 LYS n 2 204 VAL n 2 205 ASP n 2 206 GLU n 2 207 GLU n 2 208 LYS n 2 209 LEU n 2 210 LEU n 2 211 ALA n 2 212 ASP n 2 213 ILE n 3 1 MSE n 3 2 ALA n 3 3 LYS n 3 4 GLU n 3 5 VAL n 3 6 VAL n 3 7 GLU n 3 8 VAL n 3 9 LEU n 3 10 VAL n 3 11 THR n 3 12 GLY n 3 13 GLY n 3 14 ARG n 3 15 ALA n 3 16 THR n 3 17 ALA n 3 18 GLY n 3 19 PRO n 3 20 PRO n 3 21 LEU n 3 22 GLY n 3 23 PRO n 3 24 ALA n 3 25 ILE n 3 26 GLY n 3 27 PRO n 3 28 LEU n 3 29 GLY n 3 30 VAL n 3 31 ASN n 3 32 VAL n 3 33 MSE n 3 34 GLN n 3 35 VAL n 3 36 VAL n 3 37 LYS n 3 38 GLU n 3 39 ILE n 3 40 ASN n 3 41 GLU n 3 42 LYS n 3 43 THR n 3 44 LYS n 3 45 ASP n 3 46 TYR n 3 47 GLU n 3 48 GLY n 3 49 MSE n 3 50 GLN n 3 51 VAL n 3 52 PRO n 3 53 VAL n 3 54 LYS n 3 55 VAL n 3 56 ILE n 3 57 VAL n 3 58 ASP n 3 59 THR n 3 60 GLU n 3 61 THR n 3 62 ARG n 3 63 LYS n 3 64 PHE n 3 65 GLU n 3 66 ILE n 3 67 GLU n 3 68 VAL n 3 69 GLY n 3 70 ILE n 3 71 PRO n 3 72 PRO n 3 73 THR n 3 74 THR n 3 75 ALA n 3 76 LEU n 3 77 ILE n 3 78 LYS n 3 79 LYS n 3 80 GLU n 3 81 LEU n 3 82 GLY n 3 83 ILE n 3 84 GLU n 3 85 THR n 3 86 ALA n 3 87 ALA n 3 88 HIS n 3 89 GLU n 3 90 PRO n 3 91 ARG n 3 92 HIS n 3 93 GLU n 3 94 VAL n 3 95 VAL n 3 96 GLY n 3 97 ASN n 3 98 LEU n 3 99 THR n 3 100 LEU n 3 101 GLU n 3 102 GLN n 3 103 VAL n 3 104 ILE n 3 105 LYS n 3 106 ILE n 3 107 ALA n 3 108 LYS n 3 109 MSE n 3 110 LYS n 3 111 LYS n 3 112 ASP n 3 113 ALA n 3 114 MSE n 3 115 LEU n 3 116 SER n 3 117 TYR n 3 118 THR n 3 119 LEU n 3 120 LYS n 3 121 ASN n 3 122 ALA n 3 123 VAL n 3 124 LYS n 3 125 GLU n 3 126 VAL n 3 127 LEU n 3 128 GLY n 3 129 THR n 3 130 CYS n 3 131 GLY n 3 132 SER n 3 133 MSE n 3 134 GLY n 3 135 VAL n 3 136 THR n 3 137 VAL n 3 138 GLU n 3 139 GLY n 3 140 LYS n 3 141 ASP n 3 142 PRO n 3 143 LYS n 3 144 GLU n 3 145 VAL n 3 146 GLN n 3 147 LYS n 3 148 GLU n 3 149 ILE n 3 150 ASP n 3 151 ALA n 3 152 GLY n 3 153 VAL n 3 154 TYR n 3 155 ASP n 3 156 GLU n 3 157 TYR n 3 158 PHE n 3 159 LYS n 3 160 GLU n 3 161 GLU n 4 1 QUA n 4 2 ILE n 4 3 ALA n 4 4 DHA n 4 5 ALA n 4 6 SER n 4 7 BB9 n 4 8 THR n 4 9 DBU n 4 10 DCY n 4 11 TS9 n 4 12 BB9 n 4 13 THR n 4 14 BB9 n 4 15 MH6 n 4 16 BB9 n 4 17 DHA n 4 18 DHA n 4 19 NH2 n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 74 ? ? ? ? ? ? ? ? ? 'Methanocaldococcus jannaschii' 2190 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'XL1(Blue)' ? ? ? ? ? ? ? pUC18 ? ? ? pMja23S-74.UC18 ? ? 2 1 sample 'Biological sequence' 1 213 ? ? 'rpl10, rplP0, MJ0509' ? ? ? ? ? ? 'Methanocaldococcus jannaschii' 2190 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? pUBS520 ? ? ? ? ? ? plasmid pET-11c ? ? pET-11c/MjaP0NTF ? ? 3 1 sample 'Biological sequence' 1 161 ? ? 'rpl11, MJ0373' ? ? ? ? ? ? 'Methanocaldococcus jannaschii' 2190 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? pUBS520 ? ? ? ? ? ? pET-11c ? ? ? pET-11c/MjaL11 ? ? # _entity_src_nat.entity_id 4 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Streptomyces azureus' _entity_src_nat.pdbx_ncbi_taxonomy_id 146537 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 REF NR_077055.1 470491724 ? 1 GCCUAAGACAGCGGGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAACAGCUCACCCGUCGAGG 1151 2 UNP RL10_METJA P54049 ? 2 ;VAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVE RGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVK KGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADI ; 9 3 UNP RL11_METJA P54030 ? 3 ;MAKEVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRKFEIEVGIPPTTALIKKE LGIETAAHEPRHEVVGNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAGVYDEYFKE E ; 1 4 UNP THCL_STRAJ P0C8P8 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5D8H A 1 ? 73 ? 470491724 1151 ? 1223 ? 1151 1223 2 2 5D8H B 1 ? 213 ? P54049 9 ? 221 ? 9 221 3 3 5D8H C 1 ? 161 ? P54030 1 ? 161 ? 0 160 4 4 5D8H D 1 ? 19 ? 5D8H 0 ? 18 ? 0 18 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5D8H C A 74 ? REF 470491724 ? ? 'expression tag' 1224 1 2 5D8H MSE B 1 ? UNP P54049 VAL 9 'engineered mutation' 9 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BB9 'peptide linking' n '(2Z)-2-amino-3-sulfanylprop-2-enoic acid' ? 'C3 H5 N O2 S' 119.142 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DBU 'peptide linking' n '(2Z)-2-AMINOBUT-2-ENOIC ACID' Z-DEHYDROBUTYRINE 'C4 H7 N O2' 101.104 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 DHA 'peptide linking' n '2-AMINO-ACRYLIC ACID' 2,3-DIDEHYDROALANINE 'C3 H5 N O2' 87.077 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MH6 'peptide linking' n '3-hydroxy-2-iminopropanoic acid' ? 'C3 H5 N O3' 103.077 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 QUA non-polymer . '8-HYDROXY-4-(1-HYDROXYETHYL)QUINOLINE-2-CARBOXYLIC ACID' ? 'C12 H13 N O4' 235.236 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TS9 'L-peptide linking' n '(2S,3S,4R)-2-amino-3,4-dihydroxy-3-methylpentanoic acid' ? 'C6 H13 N O4' 163.172 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5D8H _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 mM Tris-HCl, pH 7.5, 10% PEG 8000, 20% glycerol, 1 mM TCEP (tris(2-carboxyethyl)phosphine), 0.125 mM CTAB' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-02-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97953 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97953 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5D8H _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 50260 _reflns.number_obs 50260 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.47 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.96 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.97 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.32 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 98.1 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.79 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.49 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5D8H _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.800 _refine.ls_d_res_low 45.545 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 50053 _refine.ls_number_reflns_R_free 2495 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.22 _refine.ls_percent_reflns_R_free 4.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2099 _refine.ls_R_factor_R_free 0.2450 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2081 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.26 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.54 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.39 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2900 _refine_hist.pdbx_number_atoms_nucleic_acid 1588 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 65 _refine_hist.number_atoms_total 4592 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 45.545 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 ? 4737 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.929 ? 6754 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.004 ? 2035 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.066 ? 840 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 ? 577 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.8001 2.8539 . . 132 2647 98.00 . . . 0.4692 . 0.4038 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8539 2.9122 . . 136 2623 100.00 . . . 0.3601 . 0.3591 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9122 2.9755 . . 135 2648 99.00 . . . 0.3141 . 0.3212 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9755 3.0447 . . 138 2644 99.00 . . . 0.3115 . 0.2947 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0447 3.1208 . . 137 2640 99.00 . . . 0.2537 . 0.2720 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1208 3.2052 . . 139 2625 99.00 . . . 0.3535 . 0.2383 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2052 3.2995 . . 143 2636 99.00 . . . 0.2579 . 0.2204 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2995 3.4059 . . 141 2633 99.00 . . . 0.3737 . 0.2261 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4059 3.5276 . . 136 2643 100.00 . . . 0.2443 . 0.2286 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5276 3.6688 . . 142 2642 100.00 . . . 0.2466 . 0.2121 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6688 3.8357 . . 144 2677 99.00 . . . 0.2548 . 0.2046 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8357 4.0378 . . 139 2626 100.00 . . . 0.2276 . 0.1887 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0378 4.2906 . . 141 2666 100.00 . . . 0.2253 . 0.1874 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2906 4.6216 . . 139 2635 99.00 . . . 0.2314 . 0.1917 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6216 5.0862 . . 141 2672 100.00 . . . 0.2164 . 0.1720 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0862 5.8208 . . 135 2649 100.00 . . . 0.2186 . 0.1708 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.8208 7.3287 . . 140 2654 100.00 . . . 0.1919 . 0.1990 . . . . . . . . . . 'X-RAY DIFFRACTION' 7.3287 45.5509 . . 137 2598 98.00 . . . 0.2402 . 0.2002 . . . . . . . . . . # _struct.entry_id 5D8H _struct.title 'CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII WITH ANTIBIOTIC THIOSTREPTON' _struct.pdbx_descriptor '50S ribosomal protein L10, 50S ribosomal protein L11, THIOSTREPTON/RNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5D8H _struct_keywords.text 'ribosome, P-stalk, archaea, ANTIBIOTIC, THIOSTREPTON, ribosomal protein' _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 6 ? P N N 6 ? Q N N 6 ? R N N 7 ? S N N 7 ? T N N 6 ? U N N 7 ? V N N 5 ? W N N 8 ? X N N 8 ? Y N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA B 2 ? LYS B 19 ? ALA B 10 LYS B 27 1 ? 18 HELX_P HELX_P2 AA2 PRO B 31 ? ILE B 42 ? PRO B 39 ILE B 50 1 ? 12 HELX_P HELX_P3 AA3 ARG B 52 ? LEU B 67 ? ARG B 60 LEU B 75 1 ? 16 HELX_P HELX_P4 AA4 ASN B 69 ? LEU B 75 ? ASN B 77 LEU B 83 1 ? 7 HELX_P HELX_P5 AA5 ALA B 76 ? VAL B 79 ? ALA B 84 VAL B 87 5 ? 4 HELX_P HELX_P6 AA6 ASN B 91 ? ASN B 102 ? ASN B 99 ASN B 110 1 ? 12 HELX_P HELX_P7 AA7 PHE B 132 ? LEU B 136 ? PHE B 140 LEU B 144 5 ? 5 HELX_P HELX_P8 AA8 SER B 166 ? LEU B 176 ? SER B 174 LEU B 184 1 ? 11 HELX_P HELX_P9 AA9 THR B 198 ? VAL B 204 ? THR B 206 VAL B 212 1 ? 7 HELX_P HELX_P10 AB1 PRO C 20 ? GLY C 26 ? PRO C 19 GLY C 25 1 ? 7 HELX_P HELX_P11 AB2 PRO C 27 ? GLY C 29 ? PRO C 26 GLY C 28 5 ? 3 HELX_P HELX_P12 AB3 MSE C 33 ? THR C 43 ? MSE C 32 THR C 42 1 ? 11 HELX_P HELX_P13 AB4 LYS C 44 ? GLU C 47 ? LYS C 43 GLU C 46 5 ? 4 HELX_P HELX_P14 AB5 PRO C 72 ? LYS C 79 ? PRO C 71 LYS C 78 1 ? 8 HELX_P HELX_P15 AB6 THR C 99 ? LYS C 111 ? THR C 98 LYS C 110 1 ? 13 HELX_P HELX_P16 AB7 ASP C 112 ? MSE C 114 ? ASP C 111 MSE C 113 5 ? 3 HELX_P HELX_P17 AB8 THR C 118 ? SER C 132 ? THR C 117 SER C 131 1 ? 15 HELX_P HELX_P18 AB9 ASP C 141 ? ALA C 151 ? ASP C 140 ALA C 150 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A G 7 O6 ? ? ? 1_555 M MG . MG ? ? A G 1157 A MG 1309 1_555 ? ? ? ? ? ? ? 2.998 ? metalc2 metalc ? ? A G 16 O6 ? ? ? 1_555 E MG . MG ? ? A G 1166 A MG 1301 1_555 ? ? ? ? ? ? ? 2.184 ? metalc3 metalc ? ? A G 19 OP2 ? ? ? 1_555 P NA . NA ? ? A G 1169 A NA 1312 1_555 ? ? ? ? ? ? ? 2.962 ? metalc4 metalc ? ? A U 21 OP2 ? ? ? 1_555 P NA . NA ? ? A U 1171 A NA 1312 1_555 ? ? ? ? ? ? ? 2.796 ? metalc5 metalc ? ? A A 29 "O3'" ? ? ? 1_555 Q NA . NA ? ? A A 1179 A NA 1313 1_555 ? ? ? ? ? ? ? 2.582 ? metalc6 metalc ? ? A A 30 OP2 ? ? ? 1_555 G MG . MG ? ? A A 1180 A MG 1303 1_555 ? ? ? ? ? ? ? 2.447 ? metalc7 metalc ? ? A A 30 OP2 ? ? ? 1_555 Q NA . NA ? ? A A 1180 A NA 1313 1_555 ? ? ? ? ? ? ? 3.070 ? metalc8 metalc ? ? A A 30 "O5'" ? ? ? 1_555 Q NA . NA ? ? A A 1180 A NA 1313 1_555 ? ? ? ? ? ? ? 2.954 ? metalc9 metalc ? ? A C 32 OP1 ? ? ? 1_555 G MG . MG ? ? A C 1182 A MG 1303 1_555 ? ? ? ? ? ? ? 2.343 ? metalc10 metalc ? ? A C 32 OP1 ? ? ? 1_555 Q NA . NA ? ? A C 1182 A NA 1313 1_555 ? ? ? ? ? ? ? 3.189 ? metalc11 metalc ? ? A A 33 OP2 ? ? ? 1_555 F MG . MG ? ? A A 1183 A MG 1302 1_555 ? ? ? ? ? ? ? 2.230 ? metalc12 metalc ? ? A U 54 O4 ? ? ? 1_555 F MG . MG ? ? A U 1204 A MG 1302 1_555 ? ? ? ? ? ? ? 1.967 ? covale1 covale both ? B MSE 1 C ? ? ? 1_555 B ALA 2 N ? ? B MSE 9 B ALA 10 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale both ? B ASP 26 C ? ? ? 1_555 B MSE 27 N ? ? B ASP 34 B MSE 35 1_555 ? ? ? ? ? ? ? 1.317 ? covale3 covale both ? B MSE 27 C ? ? ? 1_555 B MSE 28 N ? ? B MSE 35 B MSE 36 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale both ? B MSE 28 C ? ? ? 1_555 B ASP 29 N ? ? B MSE 36 B ASP 37 1_555 ? ? ? ? ? ? ? 1.336 ? covale5 covale both ? B ARG 49 C ? ? ? 1_555 B MSE 50 N ? ? B ARG 57 B MSE 58 1_555 ? ? ? ? ? ? ? 1.326 ? covale6 covale both ? B MSE 50 C ? ? ? 1_555 B SER 51 N ? ? B MSE 58 B SER 59 1_555 ? ? ? ? ? ? ? 1.325 ? covale7 covale both ? B ASP 89 C ? ? ? 1_555 B MSE 90 N ? ? B ASP 97 B MSE 98 1_555 ? ? ? ? ? ? ? 1.337 ? covale8 covale both ? B MSE 90 C ? ? ? 1_555 B ASN 91 N ? ? B MSE 98 B ASN 99 1_555 ? ? ? ? ? ? ? 1.327 ? covale9 covale both ? B GLY 126 C ? ? ? 1_555 B MSE 127 N ? ? B GLY 134 B MSE 135 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale both ? B MSE 127 C ? ? ? 1_555 B PRO 128 N ? ? B MSE 135 B PRO 136 1_555 ? ? ? ? ? ? ? 1.346 ? covale11 covale both ? C VAL 32 C ? ? ? 1_555 C MSE 33 N ? ? C VAL 31 C MSE 32 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale both ? C MSE 33 C ? ? ? 1_555 C GLN 34 N ? ? C MSE 32 C GLN 33 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale both ? C GLY 48 C ? ? ? 1_555 C MSE 49 N ? ? C GLY 47 C MSE 48 1_555 ? ? ? ? ? ? ? 1.330 ? covale14 covale both ? C MSE 49 C ? ? ? 1_555 C GLN 50 N ? ? C MSE 48 C GLN 49 1_555 ? ? ? ? ? ? ? 1.330 ? covale15 covale both ? C LYS 108 C ? ? ? 1_555 C MSE 109 N ? ? C LYS 107 C MSE 108 1_555 ? ? ? ? ? ? ? 1.325 ? covale16 covale both ? C MSE 109 C ? ? ? 1_555 C LYS 110 N ? ? C MSE 108 C LYS 109 1_555 ? ? ? ? ? ? ? 1.322 ? metalc13 metalc ? ? C LYS 111 O ? ? ? 1_555 V MG . MG ? ? C LYS 110 C MG 201 1_555 ? ? ? ? ? ? ? 2.966 ? covale17 covale both ? C ALA 113 C ? ? ? 1_555 C MSE 114 N ? ? C ALA 112 C MSE 113 1_555 ? ? ? ? ? ? ? 1.323 ? covale18 covale both ? C MSE 114 C ? ? ? 1_555 C LEU 115 N ? ? C MSE 113 C LEU 114 1_555 ? ? ? ? ? ? ? 1.328 ? metalc14 metalc ? ? C MSE 114 O ? ? ? 1_555 V MG . MG ? ? C MSE 113 C MG 201 1_555 ? ? ? ? ? ? ? 2.818 ? metalc15 metalc ? ? C SER 116 O ? ? ? 1_555 V MG . MG ? ? C SER 115 C MG 201 1_555 ? ? ? ? ? ? ? 2.759 ? covale19 covale both ? C SER 132 C ? ? ? 1_555 C MSE 133 N ? ? C SER 131 C MSE 132 1_555 ? ? ? ? ? ? ? 1.334 ? covale20 covale both ? C MSE 133 C ? ? ? 1_555 C GLY 134 N ? ? C MSE 132 C GLY 133 1_555 ? ? ? ? ? ? ? 1.330 ? covale21 covale one ? D QUA 1 C11 ? ? ? 1_555 D THR 13 OG1 ? ? D QUA 0 D THR 12 1_555 ? ? ? ? ? ? ? 1.484 ? covale22 covale both ? D ALA 3 C ? ? ? 1_555 D DHA 4 N ? ? D ALA 2 D DHA 3 1_555 ? ? ? ? ? ? ? 1.505 ? covale23 covale both ? D DHA 4 C ? ? ? 1_555 D ALA 5 N ? ? D DHA 3 D ALA 4 1_555 ? ? ? ? ? ? ? 1.264 ? covale24 covale one ? D SER 6 CA ? ? ? 1_555 D BB9 14 C ? ? D SER 5 D BB9 13 1_555 ? ? ? ? ? ? ? 1.631 ? covale25 covale both ? D SER 6 C ? ? ? 1_555 D BB9 7 N ? ? D SER 5 D BB9 6 1_555 ? ? ? ? ? ? ? 1.445 ? covale26 covale one ? D SER 6 C ? ? ? 1_555 D BB9 7 SG ? ? D SER 5 D BB9 6 1_555 ? ? ? ? ? ? ? 1.934 ? covale27 covale one ? D SER 6 CB ? ? ? 1_555 D MH6 15 CB ? ? D SER 5 D MH6 14 1_555 ? ? ? ? ? ? ? 1.570 ? covale28 covale both ? D BB9 7 C ? ? ? 1_555 D THR 8 N ? ? D BB9 6 D THR 7 1_555 ? ? ? ? ? ? ? 1.252 ? covale29 covale both ? D THR 8 C ? ? ? 1_555 D DBU 9 N ? ? D THR 7 D DBU 8 1_555 ? ? ? ? ? ? ? 1.469 ? covale30 covale both ? D DBU 9 C ? ? ? 1_555 D DCY 10 N ? ? D DBU 8 D DCY 9 1_555 ? ? ? ? ? ? ? 1.396 ? covale31 covale one ? D DBU 9 C ? ? ? 1_555 D DCY 10 SG ? ? D DBU 8 D DCY 9 1_555 ? ? ? ? ? ? ? 1.808 ? covale32 covale both ? D DCY 10 C ? ? ? 1_555 D TS9 11 N ? ? D DCY 9 D TS9 10 1_555 ? ? ? ? ? ? ? 1.330 ? covale33 covale both ? D TS9 11 C ? ? ? 1_555 D BB9 12 N ? ? D TS9 10 D BB9 11 1_555 ? ? ? ? ? ? ? 1.404 ? covale34 covale one ? D TS9 11 C ? ? ? 1_555 D BB9 12 SG ? ? D TS9 10 D BB9 11 1_555 ? ? ? ? ? ? ? 1.735 ? covale35 covale both ? D THR 13 C ? ? ? 1_555 D BB9 14 N ? ? D THR 12 D BB9 13 1_555 ? ? ? ? ? ? ? 1.382 ? covale36 covale one ? D THR 13 C ? ? ? 1_555 D BB9 14 SG ? ? D THR 12 D BB9 13 1_555 ? ? ? ? ? ? ? 1.836 ? covale37 covale both ? D BB9 14 C ? ? ? 1_555 D MH6 15 N ? ? D BB9 13 D MH6 14 1_555 ? ? ? ? ? ? ? 1.581 ? covale38 covale both ? D MH6 15 C ? ? ? 1_555 D BB9 16 N ? ? D MH6 14 D BB9 15 1_555 ? ? ? ? ? ? ? 1.399 ? covale39 covale one ? D MH6 15 C ? ? ? 1_555 D BB9 16 SG ? ? D MH6 14 D BB9 15 1_555 ? ? ? ? ? ? ? 1.802 ? covale40 covale both ? D BB9 16 C ? ? ? 1_555 D DHA 17 N ? ? D BB9 15 D DHA 16 1_555 ? ? ? ? ? ? ? 1.551 ? covale41 covale both ? D DHA 17 C ? ? ? 1_555 D DHA 18 N ? ? D DHA 16 D DHA 17 1_555 ? ? ? ? ? ? ? 1.405 ? covale42 covale both ? D DHA 18 C ? ? ? 1_555 D NH2 19 N ? ? D DHA 17 D NH2 18 1_555 ? ? ? ? ? ? ? 1.379 ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1301 A HOH 1417 1_555 ? ? ? ? ? ? ? 2.253 ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1301 A HOH 1405 1_555 ? ? ? ? ? ? ? 1.880 ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1301 A HOH 1414 1_555 ? ? ? ? ? ? ? 2.059 ? metalc19 metalc ? ? E MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1301 A HOH 1434 1_555 ? ? ? ? ? ? ? 2.265 ? metalc20 metalc ? ? E MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1301 A HOH 1429 1_555 ? ? ? ? ? ? ? 1.915 ? metalc21 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1302 A HOH 1409 1_555 ? ? ? ? ? ? ? 2.835 ? metalc22 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1302 A HOH 1416 1_555 ? ? ? ? ? ? ? 2.828 ? metalc23 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1302 A HOH 1422 1_555 ? ? ? ? ? ? ? 2.060 ? metalc24 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1302 A HOH 1428 1_555 ? ? ? ? ? ? ? 2.137 ? metalc25 metalc ? ? G MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1303 A HOH 1432 1_555 ? ? ? ? ? ? ? 2.227 ? metalc26 metalc ? ? G MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1303 A HOH 1437 1_555 ? ? ? ? ? ? ? 2.580 ? metalc27 metalc ? ? H MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1304 A HOH 1420 1_555 ? ? ? ? ? ? ? 1.950 ? metalc28 metalc ? ? H MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1304 A HOH 1431 1_555 ? ? ? ? ? ? ? 2.238 ? metalc29 metalc ? ? H MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1304 A HOH 1440 1_555 ? ? ? ? ? ? ? 2.243 ? metalc30 metalc ? ? H MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1304 A HOH 1442 1_555 ? ? ? ? ? ? ? 2.070 ? metalc31 metalc ? ? H MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1304 A HOH 1454 1_555 ? ? ? ? ? ? ? 2.039 ? metalc32 metalc ? ? H MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1304 A HOH 1403 1_555 ? ? ? ? ? ? ? 2.285 ? metalc33 metalc ? ? I MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1305 A HOH 1413 1_555 ? ? ? ? ? ? ? 2.502 ? metalc34 metalc ? ? I MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1305 A HOH 1424 1_555 ? ? ? ? ? ? ? 2.199 ? metalc35 metalc ? ? I MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1305 A HOH 1425 1_555 ? ? ? ? ? ? ? 2.354 ? metalc36 metalc ? ? I MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1305 A HOH 1439 1_555 ? ? ? ? ? ? ? 2.642 ? metalc37 metalc ? ? I MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1305 A HOH 1448 1_555 ? ? ? ? ? ? ? 2.345 ? metalc38 metalc ? ? I MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1305 A HOH 1451 1_555 ? ? ? ? ? ? ? 2.526 ? metalc39 metalc ? ? J MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1306 A HOH 1412 1_555 ? ? ? ? ? ? ? 1.797 ? metalc40 metalc ? ? J MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1306 A HOH 1436 1_555 ? ? ? ? ? ? ? 2.148 ? metalc41 metalc ? ? J MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1306 A HOH 1445 1_555 ? ? ? ? ? ? ? 2.067 ? metalc42 metalc ? ? J MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1306 A HOH 1446 1_555 ? ? ? ? ? ? ? 1.741 ? metalc43 metalc ? ? J MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1306 A HOH 1449 1_555 ? ? ? ? ? ? ? 1.734 ? metalc44 metalc ? ? J MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1306 A HOH 1453 1_555 ? ? ? ? ? ? ? 1.777 ? metalc45 metalc ? ? K MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1307 A HOH 1408 1_555 ? ? ? ? ? ? ? 2.529 ? metalc46 metalc ? ? K MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1307 A HOH 1427 1_555 ? ? ? ? ? ? ? 2.454 ? metalc47 metalc ? ? K MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1307 A HOH 1435 1_555 ? ? ? ? ? ? ? 2.446 ? metalc48 metalc ? ? L MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1308 A HOH 1421 1_555 ? ? ? ? ? ? ? 2.248 ? metalc49 metalc ? ? L MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1308 A HOH 1438 1_555 ? ? ? ? ? ? ? 1.975 ? metalc50 metalc ? ? L MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1308 A HOH 1441 1_555 ? ? ? ? ? ? ? 1.800 ? metalc51 metalc ? ? M MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1309 A HOH 1426 1_555 ? ? ? ? ? ? ? 2.356 ? metalc52 metalc ? ? M MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1309 A HOH 1452 1_555 ? ? ? ? ? ? ? 2.493 ? metalc53 metalc ? ? M MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 1309 A HOH 1456 1_555 ? ? ? ? ? ? ? 2.406 ? metalc54 metalc ? ? O NA . NA ? ? ? 1_555 W HOH . O ? ? A NA 1311 A HOH 1447 1_555 ? ? ? ? ? ? ? 2.942 ? metalc55 metalc ? ? Q NA . NA ? ? ? 1_555 W HOH . O ? ? A NA 1313 A HOH 1401 1_555 ? ? ? ? ? ? ? 2.082 ? metalc56 metalc ? ? V MG . MG ? ? ? 1_555 Y HOH . O ? ? C MG 201 C HOH 303 1_555 ? ? ? ? ? ? ? 2.366 ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 74 N3 ? ? A G 1151 A C 1224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 74 O2 ? ? A G 1151 A C 1224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 74 N4 ? ? A G 1151 A C 1224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 73 N1 ? ? A C 1152 A G 1223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 73 O6 ? ? A C 1152 A G 1223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 73 N2 ? ? A C 1152 A G 1223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 72 N1 ? ? A C 1153 A G 1222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 72 O6 ? ? A C 1153 A G 1222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 72 N2 ? ? A C 1153 A G 1222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 71 N7 ? ? A G 1157 A A 1221 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog11 hydrog ? ? A G 7 N3 ? ? ? 1_555 A A 71 N6 ? ? A G 1157 A A 1221 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog12 hydrog ? ? A A 8 N6 ? ? ? 1_555 A G 70 N3 ? ? A A 1158 A G 1220 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog13 hydrog ? ? A A 8 N7 ? ? ? 1_555 A G 70 N2 ? ? A A 1158 A G 1220 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog14 hydrog ? ? A A 10 N6 ? ? ? 1_555 A C 69 O2 ? ? A A 1160 A C 1219 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? hydrog15 hydrog ? ? A G 11 N1 ? ? ? 1_555 A U 68 O2 ? ? A G 1161 A U 1218 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog16 hydrog ? ? A G 11 O6 ? ? ? 1_555 A U 68 N3 ? ? A G 1161 A U 1218 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog17 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 67 N1 ? ? A C 1162 A G 1217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 67 O6 ? ? A C 1162 A G 1217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 67 N2 ? ? A C 1162 A G 1217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 66 N3 ? ? A G 1163 A C 1216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 66 O2 ? ? A G 1163 A C 1216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 66 N4 ? ? A G 1163 A C 1216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 65 N3 ? ? A G 1164 A C 1215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 65 O2 ? ? A G 1164 A C 1215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 65 N4 ? ? A G 1164 A C 1215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A G 15 N2 ? ? ? 1_555 A A 45 N3 ? ? A G 1165 A A 1195 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? hydrog27 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 64 N3 ? ? A G 1165 A C 1214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 64 O2 ? ? A G 1165 A C 1214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 64 N4 ? ? A G 1165 A C 1214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A G 16 N2 ? ? ? 1_555 A A 63 N7 ? ? A G 1166 A A 1213 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog31 hydrog ? ? A G 16 N3 ? ? ? 1_555 A A 63 N6 ? ? A G 1166 A A 1213 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog32 hydrog ? ? A A 17 N1 ? ? ? 1_555 A U 41 N3 ? ? A A 1167 A U 1191 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? A A 17 N6 ? ? ? 1_555 A U 41 O4 ? ? A A 1167 A U 1191 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 40 N3 ? ? A G 1168 A C 1190 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 40 O2 ? ? A G 1168 A C 1190 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 40 N4 ? ? A G 1168 A C 1190 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 39 N3 ? ? A G 1169 A C 1189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 39 O2 ? ? A G 1169 A C 1189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 39 N4 ? ? A G 1169 A C 1189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 48 N7 ? ? A U 1170 A A 1198 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? hydrog41 hydrog ? ? A U 20 O4 ? ? ? 1_555 A A 48 N6 ? ? A U 1170 A A 1198 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? hydrog42 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 1172 A C 1186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 1172 A C 1186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 1172 A C 1186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog45 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 35 N3 ? ? A G 1173 A C 1185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog46 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 35 O2 ? ? A G 1173 A C 1185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog47 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 35 N4 ? ? A G 1173 A C 1185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog48 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 34 N1 ? ? A C 1174 A G 1184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog49 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 34 O6 ? ? A C 1174 A G 1184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog50 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 34 N2 ? ? A C 1174 A G 1184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog51 hydrog ? ? A U 25 O2 ? ? ? 1_555 A A 33 N6 ? ? A U 1175 A A 1183 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? hydrog52 hydrog ? ? A G 31 N1 ? ? ? 1_555 A G 51 O6 ? ? A G 1181 A G 1201 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog53 hydrog ? ? A G 31 N2 ? ? ? 1_555 A G 51 N7 ? ? A G 1181 A G 1201 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog54 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 60 N4 ? ? A G 1181 A C 1210 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog55 hydrog ? ? A C 32 O2 ? ? ? 1_555 A C 52 N4 ? ? A C 1182 A C 1202 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? hydrog56 hydrog ? ? A U 42 N3 ? ? ? 1_555 A A 46 N1 ? ? A U 1192 A A 1196 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog57 hydrog ? ? A U 42 O2 ? ? ? 1_555 A A 46 N6 ? ? A U 1192 A A 1196 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog58 hydrog ? ? A G 47 N1 ? ? ? 1_555 A C 62 N3 ? ? A G 1197 A C 1212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog59 hydrog ? ? A G 47 N2 ? ? ? 1_555 A C 62 O2 ? ? A G 1197 A C 1212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog60 hydrog ? ? A G 47 O6 ? ? ? 1_555 A C 62 N4 ? ? A G 1197 A C 1212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog61 hydrog ? ? A G 49 N2 ? ? ? 1_555 A U 61 O4 ? ? A G 1199 A U 1211 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? hydrog62 hydrog ? ? A U 50 N3 ? ? ? 1_555 A U 61 O2 ? ? A U 1200 A U 1211 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? hydrog63 hydrog ? ? A U 50 O4 ? ? ? 1_555 A U 61 N3 ? ? A U 1200 A U 1211 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? hydrog64 hydrog ? ? A G 51 N1 ? ? ? 1_555 A C 60 N3 ? ? A G 1201 A C 1210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog65 hydrog ? ? A G 51 N2 ? ? ? 1_555 A C 60 O2 ? ? A G 1201 A C 1210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog66 hydrog ? ? A G 51 O6 ? ? ? 1_555 A C 60 N4 ? ? A G 1201 A C 1210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog67 hydrog ? ? A C 52 N3 ? ? ? 1_555 A G 59 N1 ? ? A C 1202 A G 1209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog68 hydrog ? ? A C 52 N4 ? ? ? 1_555 A G 59 O6 ? ? A C 1202 A G 1209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog69 hydrog ? ? A C 52 O2 ? ? ? 1_555 A G 59 N2 ? ? A C 1202 A G 1209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog70 hydrog ? ? A G 53 N2 ? ? ? 1_555 A A 58 N7 ? ? A G 1203 A A 1208 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog71 hydrog ? ? A G 53 N3 ? ? ? 1_555 A A 58 N6 ? ? A G 1203 A A 1208 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 18 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 17 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 19 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 18 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -20.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL B 46 ? MSE B 50 ? VAL B 54 MSE B 58 AA1 2 ALA B 83 ? THR B 88 ? ALA B 91 THR B 96 AA1 3 VAL B 21 ? ASP B 26 ? VAL B 29 ASP B 34 AA1 4 ASN B 186 ? GLU B 192 ? ASN B 194 GLU B 200 AA1 5 ILE B 195 ? TYR B 197 ? ILE B 203 TYR B 205 AA2 1 SER B 104 ? ALA B 106 ? SER B 112 ALA B 114 AA2 2 ILE B 181 ? VAL B 183 ? ILE B 189 VAL B 191 AA3 1 GLY B 123 ? SER B 124 ? GLY B 131 SER B 132 AA3 2 LYS B 149 ? ILE B 152 ? LYS B 157 ILE B 160 AA3 3 ALA B 143 ? GLU B 146 ? ALA B 151 GLU B 154 AA4 1 LYS C 3 ? THR C 11 ? LYS C 2 THR C 10 AA4 2 GLN C 50 ? ASP C 58 ? GLN C 49 ASP C 57 AA4 3 ILE C 66 ? VAL C 68 ? ILE C 65 VAL C 67 AA5 1 ASN C 97 ? LEU C 98 ? ASN C 96 LEU C 97 AA5 2 THR C 136 ? VAL C 137 ? THR C 135 VAL C 136 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG B 49 ? N ARG B 57 O ILE B 85 ? O ILE B 93 AA1 2 3 O ALA B 84 ? O ALA B 92 N VAL B 25 ? N VAL B 33 AA1 3 4 N ASP B 26 ? N ASP B 34 O ASN B 186 ? O ASN B 194 AA1 4 5 N VAL B 190 ? N VAL B 198 O TYR B 197 ? O TYR B 205 AA2 1 2 N SER B 104 ? N SER B 112 O VAL B 183 ? O VAL B 191 AA3 1 2 N GLY B 123 ? N GLY B 131 O ILE B 152 ? O ILE B 160 AA3 2 3 O ALA B 151 ? O ALA B 159 N ALA B 144 ? N ALA B 152 AA4 1 2 N VAL C 6 ? N VAL C 5 O VAL C 55 ? O VAL C 54 AA4 2 3 N LYS C 54 ? N LYS C 53 O GLU C 67 ? O GLU C 66 AA5 1 2 N LEU C 98 ? N LEU C 97 O THR C 136 ? O THR C 135 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1301 ? 6 'binding site for residue MG A 1301' AC2 Software A MG 1302 ? 7 'binding site for residue MG A 1302' AC3 Software A MG 1303 ? 7 'binding site for residue MG A 1303' AC4 Software A MG 1304 ? 6 'binding site for residue MG A 1304' AC5 Software A MG 1305 ? 6 'binding site for residue MG A 1305' AC6 Software A MG 1306 ? 6 'binding site for residue MG A 1306' AC7 Software A MG 1307 ? 6 'binding site for residue MG A 1307' AC8 Software A MG 1308 ? 5 'binding site for residue MG A 1308' AC9 Software A MG 1309 ? 6 'binding site for residue MG A 1309' AD1 Software A MG 1310 ? 7 'binding site for residue MG A 1310' AD2 Software A NA 1311 ? 3 'binding site for residue NA A 1311' AD3 Software A NA 1312 ? 2 'binding site for residue NA A 1312' AD4 Software A NA 1313 ? 6 'binding site for residue NA A 1313' AD5 Software A TRS 1314 ? 3 'binding site for residue TRS A 1314' AD6 Software A TRS 1315 ? 4 'binding site for residue TRS A 1315' AD7 Software B NA 301 ? 2 'binding site for residue NA B 301' AD8 Software B TRS 302 ? 4 'binding site for residue TRS B 302' AD9 Software C MG 201 ? 5 'binding site for residue MG C 201' AE1 Software D BB9 13 ? 6 'binding site for Ligand residues BB9 D 13 through NH2 D 18 bound to SER D 5' AE2 Software D BB9 6 ? 10 'binding site for Ligand residues BB9 D 6 through THR D 7 bound to SER D 5' AE3 Software D BB9 6 ? 7 'binding site for Ligand BB9 D 6 bound to SER D 5' AE4 Software D MH6 14 ? 4 'binding site for Ligand MH6 D 14 bound to SER D 5' AE5 Software D DBU 8 ? 8 'binding site for Ligand residues DBU D 8 through BB9 D 11 bound to THR D 7' AE6 Software D BB9 13 ? 7 'binding site for Ligand BB9 D 13 bound to THR D 12' AE7 Software D BB9 13 ? 7 'binding site for Ligand BB9 D 13 bound to THR D 12' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 16 ? G A 1166 . ? 1_555 ? 2 AC1 6 HOH W . ? HOH A 1405 . ? 1_555 ? 3 AC1 6 HOH W . ? HOH A 1414 . ? 1_555 ? 4 AC1 6 HOH W . ? HOH A 1417 . ? 1_555 ? 5 AC1 6 HOH W . ? HOH A 1429 . ? 1_555 ? 6 AC1 6 HOH W . ? HOH A 1434 . ? 1_555 ? 7 AC2 7 A A 33 ? A A 1183 . ? 1_555 ? 8 AC2 7 G A 53 ? G A 1203 . ? 1_555 ? 9 AC2 7 U A 54 ? U A 1204 . ? 1_555 ? 10 AC2 7 HOH W . ? HOH A 1409 . ? 1_555 ? 11 AC2 7 HOH W . ? HOH A 1416 . ? 1_555 ? 12 AC2 7 HOH W . ? HOH A 1422 . ? 1_555 ? 13 AC2 7 HOH W . ? HOH A 1428 . ? 1_555 ? 14 AC3 7 G A 23 ? G A 1173 . ? 1_555 ? 15 AC3 7 A A 30 ? A A 1180 . ? 1_555 ? 16 AC3 7 C A 32 ? C A 1182 . ? 1_555 ? 17 AC3 7 G A 34 ? G A 1184 . ? 1_555 ? 18 AC3 7 NA Q . ? NA A 1313 . ? 1_555 ? 19 AC3 7 HOH W . ? HOH A 1432 . ? 1_555 ? 20 AC3 7 HOH W . ? HOH A 1437 . ? 1_555 ? 21 AC4 6 HOH W . ? HOH A 1403 . ? 1_555 ? 22 AC4 6 HOH W . ? HOH A 1420 . ? 1_555 ? 23 AC4 6 HOH W . ? HOH A 1431 . ? 1_555 ? 24 AC4 6 HOH W . ? HOH A 1440 . ? 1_555 ? 25 AC4 6 HOH W . ? HOH A 1442 . ? 1_555 ? 26 AC4 6 HOH W . ? HOH A 1454 . ? 1_555 ? 27 AC5 6 HOH W . ? HOH A 1413 . ? 1_555 ? 28 AC5 6 HOH W . ? HOH A 1424 . ? 1_555 ? 29 AC5 6 HOH W . ? HOH A 1425 . ? 1_555 ? 30 AC5 6 HOH W . ? HOH A 1439 . ? 1_555 ? 31 AC5 6 HOH W . ? HOH A 1448 . ? 1_555 ? 32 AC5 6 HOH W . ? HOH A 1451 . ? 1_555 ? 33 AC6 6 HOH W . ? HOH A 1412 . ? 1_555 ? 34 AC6 6 HOH W . ? HOH A 1436 . ? 1_555 ? 35 AC6 6 HOH W . ? HOH A 1445 . ? 1_555 ? 36 AC6 6 HOH W . ? HOH A 1446 . ? 1_555 ? 37 AC6 6 HOH W . ? HOH A 1449 . ? 1_555 ? 38 AC6 6 HOH W . ? HOH A 1453 . ? 1_555 ? 39 AC7 6 G A 31 ? G A 1181 . ? 1_555 ? 40 AC7 6 A A 58 ? A A 1208 . ? 1_555 ? 41 AC7 6 HOH W . ? HOH A 1408 . ? 1_555 ? 42 AC7 6 HOH W . ? HOH A 1427 . ? 1_555 ? 43 AC7 6 HOH W . ? HOH A 1435 . ? 1_555 ? 44 AC7 6 HOH W . ? HOH A 1457 . ? 1_555 ? 45 AC8 5 U A 25 ? U A 1175 . ? 1_555 ? 46 AC8 5 HOH W . ? HOH A 1421 . ? 1_555 ? 47 AC8 5 HOH W . ? HOH A 1438 . ? 1_555 ? 48 AC8 5 HOH W . ? HOH A 1441 . ? 1_555 ? 49 AC8 5 HOH W . ? HOH A 1444 . ? 1_555 ? 50 AC9 6 G A 7 ? G A 1157 . ? 1_555 ? 51 AC9 6 G A 70 ? G A 1220 . ? 1_555 ? 52 AC9 6 HOH W . ? HOH A 1415 . ? 1_555 ? 53 AC9 6 HOH W . ? HOH A 1426 . ? 1_555 ? 54 AC9 6 HOH W . ? HOH A 1452 . ? 1_555 ? 55 AC9 6 HOH W . ? HOH A 1456 . ? 1_555 ? 56 AD1 7 G A 73 ? G A 1223 . ? 1_555 ? 57 AD1 7 HOH W . ? HOH A 1402 . ? 1_555 ? 58 AD1 7 HOH W . ? HOH A 1430 . ? 1_555 ? 59 AD1 7 HOH W . ? HOH A 1443 . ? 1_555 ? 60 AD1 7 HOH W . ? HOH A 1450 . ? 1_555 ? 61 AD1 7 HOH W . ? HOH A 1455 . ? 1_555 ? 62 AD1 7 HOH W . ? HOH A 1458 . ? 1_555 ? 63 AD2 3 U A 26 ? U A 1176 . ? 1_555 ? 64 AD2 3 A A 27 ? A A 1177 . ? 1_555 ? 65 AD2 3 HOH W . ? HOH A 1447 . ? 1_555 ? 66 AD3 2 G A 19 ? G A 1169 . ? 1_555 ? 67 AD3 2 U A 21 ? U A 1171 . ? 1_555 ? 68 AD4 6 A A 29 ? A A 1179 . ? 1_555 ? 69 AD4 6 A A 30 ? A A 1180 . ? 1_555 ? 70 AD4 6 C A 32 ? C A 1182 . ? 1_555 ? 71 AD4 6 A A 33 ? A A 1183 . ? 1_555 ? 72 AD4 6 MG G . ? MG A 1303 . ? 1_555 ? 73 AD4 6 HOH W . ? HOH A 1401 . ? 1_555 ? 74 AD5 3 G A 16 ? G A 1166 . ? 1_555 ? 75 AD5 3 A A 17 ? A A 1167 . ? 1_555 ? 76 AD5 3 C A 60 ? C A 1210 . ? 1_555 ? 77 AD6 4 A A 17 ? A A 1167 . ? 1_555 ? 78 AD6 4 G A 18 ? G A 1168 . ? 1_555 ? 79 AD6 4 G A 47 ? G A 1197 . ? 1_555 ? 80 AD6 4 G A 49 ? G A 1199 . ? 1_555 ? 81 AD7 2 ASP B 26 ? ASP B 34 . ? 1_555 ? 82 AD7 2 MSE B 28 ? MSE B 36 . ? 1_555 ? 83 AD8 4 GLU B 74 ? GLU B 82 . ? 1_555 ? 84 AD8 4 ASN B 77 ? ASN B 85 . ? 1_555 ? 85 AD8 4 ASN B 77 ? ASN B 85 . ? 2_545 ? 86 AD8 4 TYR B 78 ? TYR B 86 . ? 2_545 ? 87 AD9 5 LYS C 111 ? LYS C 110 . ? 1_555 ? 88 AD9 5 MSE C 114 ? MSE C 113 . ? 1_555 ? 89 AD9 5 SER C 116 ? SER C 115 . ? 1_555 ? 90 AD9 5 HOH Y . ? HOH C 301 . ? 1_555 ? 91 AD9 5 HOH Y . ? HOH C 303 . ? 1_555 ? 92 AE1 6 QUA D 1 ? QUA D 0 . ? 1_555 ? 93 AE1 6 ALA D 5 ? ALA D 4 . ? 1_555 ? 94 AE1 6 SER D 6 ? SER D 5 . ? 1_555 ? 95 AE1 6 BB9 D 7 ? BB9 D 6 . ? 1_555 ? 96 AE1 6 THR D 8 ? THR D 7 . ? 1_555 ? 97 AE1 6 THR D 13 ? THR D 12 . ? 1_555 ? 98 AE2 10 A A 27 ? A A 1177 . ? 1_555 ? 99 AE2 10 G A 28 ? G A 1178 . ? 1_555 ? 100 AE2 10 A A 55 ? A A 1205 . ? 1_555 ? 101 AE2 10 QUA D 1 ? QUA D 0 . ? 1_555 ? 102 AE2 10 ALA D 5 ? ALA D 4 . ? 1_555 ? 103 AE2 10 SER D 6 ? SER D 5 . ? 1_555 ? 104 AE2 10 DBU D 9 ? DBU D 8 . ? 1_555 ? 105 AE2 10 DCY D 10 ? DCY D 9 . ? 1_555 ? 106 AE2 10 THR D 13 ? THR D 12 . ? 1_555 ? 107 AE2 10 BB9 D 14 ? BB9 D 13 . ? 1_555 ? 108 AE3 7 A A 27 ? A A 1177 . ? 1_555 ? 109 AE3 7 A A 55 ? A A 1205 . ? 1_555 ? 110 AE3 7 QUA D 1 ? QUA D 0 . ? 1_555 ? 111 AE3 7 ALA D 5 ? ALA D 4 . ? 1_555 ? 112 AE3 7 SER D 6 ? SER D 5 . ? 1_555 ? 113 AE3 7 THR D 8 ? THR D 7 . ? 1_555 ? 114 AE3 7 BB9 D 14 ? BB9 D 13 . ? 1_555 ? 115 AE4 4 ALA D 5 ? ALA D 4 . ? 1_555 ? 116 AE4 4 SER D 6 ? SER D 5 . ? 1_555 ? 117 AE4 4 BB9 D 14 ? BB9 D 13 . ? 1_555 ? 118 AE4 4 BB9 D 16 ? BB9 D 15 . ? 1_555 ? 119 AE5 8 A A 27 ? A A 1177 . ? 1_555 ? 120 AE5 8 G A 28 ? G A 1178 . ? 1_555 ? 121 AE5 8 LYS B 17 ? LYS B 25 . ? 8_444 ? 122 AE5 8 GLU B 66 ? GLU B 74 . ? 8_444 ? 123 AE5 8 PRO C 19 ? PRO C 18 . ? 1_555 ? 124 AE5 8 QUA D 1 ? QUA D 0 . ? 1_555 ? 125 AE5 8 THR D 8 ? THR D 7 . ? 1_555 ? 126 AE5 8 THR D 13 ? THR D 12 . ? 1_555 ? 127 AE6 7 QUA D 1 ? QUA D 0 . ? 1_555 ? 128 AE6 7 ALA D 5 ? ALA D 4 . ? 1_555 ? 129 AE6 7 SER D 6 ? SER D 5 . ? 1_555 ? 130 AE6 7 BB9 D 7 ? BB9 D 6 . ? 1_555 ? 131 AE6 7 THR D 8 ? THR D 7 . ? 1_555 ? 132 AE6 7 THR D 13 ? THR D 12 . ? 1_555 ? 133 AE6 7 MH6 D 15 ? MH6 D 14 . ? 1_555 ? 134 AE7 7 QUA D 1 ? QUA D 0 . ? 1_555 ? 135 AE7 7 ALA D 5 ? ALA D 4 . ? 1_555 ? 136 AE7 7 SER D 6 ? SER D 5 . ? 1_555 ? 137 AE7 7 BB9 D 7 ? BB9 D 6 . ? 1_555 ? 138 AE7 7 THR D 8 ? THR D 7 . ? 1_555 ? 139 AE7 7 THR D 13 ? THR D 12 . ? 1_555 ? 140 AE7 7 MH6 D 15 ? MH6 D 14 . ? 1_555 ? # _atom_sites.entry_id 5D8H _atom_sites.fract_transf_matrix[1][1] 0.007996 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007864 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007523 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1151 1151 G G A . n A 1 2 C 2 1152 1152 C C A . n A 1 3 C 3 1153 1153 C C A . n A 1 4 U 4 1154 1154 U U A . n A 1 5 A 5 1155 1155 A A A . n A 1 6 A 6 1156 1156 A A A . n A 1 7 G 7 1157 1157 G G A . n A 1 8 A 8 1158 1158 A A A . n A 1 9 C 9 1159 1159 C C A . n A 1 10 A 10 1160 1160 A A A . n A 1 11 G 11 1161 1161 G G A . n A 1 12 C 12 1162 1162 C C A . n A 1 13 G 13 1163 1163 G G A . n A 1 14 G 14 1164 1164 G G A . n A 1 15 G 15 1165 1165 G G A . n A 1 16 G 16 1166 1166 G G A . n A 1 17 A 17 1167 1167 A A A . n A 1 18 G 18 1168 1168 G G A . n A 1 19 G 19 1169 1169 G G A . n A 1 20 U 20 1170 1170 U U A . n A 1 21 U 21 1171 1171 U U A . n A 1 22 G 22 1172 1172 G G A . n A 1 23 G 23 1173 1173 G G A . n A 1 24 C 24 1174 1174 C C A . n A 1 25 U 25 1175 1175 U U A . n A 1 26 U 26 1176 1176 U U A . n A 1 27 A 27 1177 1177 A A A . n A 1 28 G 28 1178 1178 G G A . n A 1 29 A 29 1179 1179 A A A . n A 1 30 A 30 1180 1180 A A A . n A 1 31 G 31 1181 1181 G G A . n A 1 32 C 32 1182 1182 C C A . n A 1 33 A 33 1183 1183 A A A . n A 1 34 G 34 1184 1184 G G A . n A 1 35 C 35 1185 1185 C C A . n A 1 36 C 36 1186 1186 C C A . n A 1 37 A 37 1187 1187 A A A . n A 1 38 U 38 1188 1188 U U A . n A 1 39 C 39 1189 1189 C C A . n A 1 40 C 40 1190 1190 C C A . n A 1 41 U 41 1191 1191 U U A . n A 1 42 U 42 1192 1192 U U A . n A 1 43 U 43 1193 1193 U U A . n A 1 44 A 44 1194 1194 A A A . n A 1 45 A 45 1195 1195 A A A . n A 1 46 A 46 1196 1196 A A A . n A 1 47 G 47 1197 1197 G G A . n A 1 48 A 48 1198 1198 A A A . n A 1 49 G 49 1199 1199 G G A . n A 1 50 U 50 1200 1200 U U A . n A 1 51 G 51 1201 1201 G G A . n A 1 52 C 52 1202 1202 C C A . n A 1 53 G 53 1203 1203 G G A . n A 1 54 U 54 1204 1204 U U A . n A 1 55 A 55 1205 1205 A A A . n A 1 56 A 56 1206 1206 A A A . n A 1 57 C 57 1207 1207 C C A . n A 1 58 A 58 1208 1208 A A A . n A 1 59 G 59 1209 1209 G G A . n A 1 60 C 60 1210 1210 C C A . n A 1 61 U 61 1211 1211 U U A . n A 1 62 C 62 1212 1212 C C A . n A 1 63 A 63 1213 1213 A A A . n A 1 64 C 64 1214 1214 C C A . n A 1 65 C 65 1215 1215 C C A . n A 1 66 C 66 1216 1216 C C A . n A 1 67 G 67 1217 1217 G G A . n A 1 68 U 68 1218 1218 U U A . n A 1 69 C 69 1219 1219 C C A . n A 1 70 G 70 1220 1220 G G A . n A 1 71 A 71 1221 1221 A A A . n A 1 72 G 72 1222 1222 G G A . n A 1 73 G 73 1223 1223 G G A . n A 1 74 C 74 1224 1224 C C A . n B 2 1 MSE 1 9 9 MSE MSE B . n B 2 2 ALA 2 10 10 ALA ALA B . n B 2 3 PRO 3 11 11 PRO PRO B . n B 2 4 TRP 4 12 12 TRP TRP B . n B 2 5 LYS 5 13 13 LYS LYS B . n B 2 6 ILE 6 14 14 ILE ILE B . n B 2 7 GLU 7 15 15 GLU GLU B . n B 2 8 GLU 8 16 16 GLU GLU B . n B 2 9 VAL 9 17 17 VAL VAL B . n B 2 10 LYS 10 18 18 LYS LYS B . n B 2 11 THR 11 19 19 THR THR B . n B 2 12 LEU 12 20 20 LEU LEU B . n B 2 13 LYS 13 21 21 LYS LYS B . n B 2 14 GLY 14 22 22 GLY GLY B . n B 2 15 LEU 15 23 23 LEU LEU B . n B 2 16 ILE 16 24 24 ILE ILE B . n B 2 17 LYS 17 25 25 LYS LYS B . n B 2 18 SER 18 26 26 SER SER B . n B 2 19 LYS 19 27 27 LYS LYS B . n B 2 20 PRO 20 28 28 PRO PRO B . n B 2 21 VAL 21 29 29 VAL VAL B . n B 2 22 VAL 22 30 30 VAL VAL B . n B 2 23 ALA 23 31 31 ALA ALA B . n B 2 24 ILE 24 32 32 ILE ILE B . n B 2 25 VAL 25 33 33 VAL VAL B . n B 2 26 ASP 26 34 34 ASP ASP B . n B 2 27 MSE 27 35 35 MSE MSE B . n B 2 28 MSE 28 36 36 MSE MSE B . n B 2 29 ASP 29 37 37 ASP ASP B . n B 2 30 VAL 30 38 38 VAL VAL B . n B 2 31 PRO 31 39 39 PRO PRO B . n B 2 32 ALA 32 40 40 ALA ALA B . n B 2 33 PRO 33 41 41 PRO PRO B . n B 2 34 GLN 34 42 42 GLN GLN B . n B 2 35 LEU 35 43 43 LEU LEU B . n B 2 36 GLN 36 44 44 GLN GLN B . n B 2 37 GLU 37 45 45 GLU GLU B . n B 2 38 ILE 38 46 46 ILE ILE B . n B 2 39 ARG 39 47 47 ARG ARG B . n B 2 40 ASP 40 48 48 ASP ASP B . n B 2 41 LYS 41 49 49 LYS LYS B . n B 2 42 ILE 42 50 50 ILE ILE B . n B 2 43 ARG 43 51 51 ARG ARG B . n B 2 44 ASP 44 52 52 ASP ASP B . n B 2 45 LYS 45 53 53 LYS LYS B . n B 2 46 VAL 46 54 54 VAL VAL B . n B 2 47 LYS 47 55 55 LYS LYS B . n B 2 48 LEU 48 56 56 LEU LEU B . n B 2 49 ARG 49 57 57 ARG ARG B . n B 2 50 MSE 50 58 58 MSE MSE B . n B 2 51 SER 51 59 59 SER SER B . n B 2 52 ARG 52 60 60 ARG ARG B . n B 2 53 ASN 53 61 61 ASN ASN B . n B 2 54 THR 54 62 62 THR THR B . n B 2 55 LEU 55 63 63 LEU LEU B . n B 2 56 ILE 56 64 64 ILE ILE B . n B 2 57 ILE 57 65 65 ILE ILE B . n B 2 58 ARG 58 66 66 ARG ARG B . n B 2 59 ALA 59 67 67 ALA ALA B . n B 2 60 LEU 60 68 68 LEU LEU B . n B 2 61 LYS 61 69 69 LYS LYS B . n B 2 62 GLU 62 70 70 GLU GLU B . n B 2 63 ALA 63 71 71 ALA ALA B . n B 2 64 ALA 64 72 72 ALA ALA B . n B 2 65 GLU 65 73 73 GLU GLU B . n B 2 66 GLU 66 74 74 GLU GLU B . n B 2 67 LEU 67 75 75 LEU LEU B . n B 2 68 ASN 68 76 76 ASN ASN B . n B 2 69 ASN 69 77 77 ASN ASN B . n B 2 70 PRO 70 78 78 PRO PRO B . n B 2 71 LYS 71 79 79 LYS LYS B . n B 2 72 LEU 72 80 80 LEU LEU B . n B 2 73 ALA 73 81 81 ALA ALA B . n B 2 74 GLU 74 82 82 GLU GLU B . n B 2 75 LEU 75 83 83 LEU LEU B . n B 2 76 ALA 76 84 84 ALA ALA B . n B 2 77 ASN 77 85 85 ASN ASN B . n B 2 78 TYR 78 86 86 TYR TYR B . n B 2 79 VAL 79 87 87 VAL VAL B . n B 2 80 GLU 80 88 88 GLU GLU B . n B 2 81 ARG 81 89 89 ARG ARG B . n B 2 82 GLY 82 90 90 GLY GLY B . n B 2 83 ALA 83 91 91 ALA ALA B . n B 2 84 ALA 84 92 92 ALA ALA B . n B 2 85 ILE 85 93 93 ILE ILE B . n B 2 86 LEU 86 94 94 LEU LEU B . n B 2 87 VAL 87 95 95 VAL VAL B . n B 2 88 THR 88 96 96 THR THR B . n B 2 89 ASP 89 97 97 ASP ASP B . n B 2 90 MSE 90 98 98 MSE MSE B . n B 2 91 ASN 91 99 99 ASN ASN B . n B 2 92 PRO 92 100 100 PRO PRO B . n B 2 93 PHE 93 101 101 PHE PHE B . n B 2 94 LYS 94 102 102 LYS LYS B . n B 2 95 LEU 95 103 103 LEU LEU B . n B 2 96 TYR 96 104 104 TYR TYR B . n B 2 97 LYS 97 105 105 LYS LYS B . n B 2 98 LEU 98 106 106 LEU LEU B . n B 2 99 LEU 99 107 107 LEU LEU B . n B 2 100 GLU 100 108 108 GLU GLU B . n B 2 101 GLU 101 109 109 GLU GLU B . n B 2 102 ASN 102 110 110 ASN ASN B . n B 2 103 LYS 103 111 111 LYS LYS B . n B 2 104 SER 104 112 112 SER SER B . n B 2 105 PRO 105 113 113 PRO PRO B . n B 2 106 ALA 106 114 114 ALA ALA B . n B 2 107 PRO 107 115 115 PRO PRO B . n B 2 108 VAL 108 116 116 VAL VAL B . n B 2 109 ARG 109 117 117 ARG ARG B . n B 2 110 GLY 110 118 118 GLY GLY B . n B 2 111 GLY 111 119 119 GLY GLY B . n B 2 112 GLN 112 120 120 GLN GLN B . n B 2 113 ILE 113 121 121 ILE ILE B . n B 2 114 ALA 114 122 122 ALA ALA B . n B 2 115 PRO 115 123 123 PRO PRO B . n B 2 116 CYS 116 124 124 CYS CYS B . n B 2 117 ASP 117 125 125 ASP ASP B . n B 2 118 ILE 118 126 126 ILE ILE B . n B 2 119 LYS 119 127 127 LYS LYS B . n B 2 120 VAL 120 128 128 VAL VAL B . n B 2 121 GLU 121 129 129 GLU GLU B . n B 2 122 LYS 122 130 130 LYS LYS B . n B 2 123 GLY 123 131 131 GLY GLY B . n B 2 124 SER 124 132 132 SER SER B . n B 2 125 THR 125 133 133 THR THR B . n B 2 126 GLY 126 134 134 GLY GLY B . n B 2 127 MSE 127 135 135 MSE MSE B . n B 2 128 PRO 128 136 136 PRO PRO B . n B 2 129 PRO 129 137 137 PRO PRO B . n B 2 130 GLY 130 138 138 GLY GLY B . n B 2 131 PRO 131 139 139 PRO PRO B . n B 2 132 PHE 132 140 140 PHE PHE B . n B 2 133 LEU 133 141 141 LEU LEU B . n B 2 134 GLY 134 142 142 GLY GLY B . n B 2 135 GLU 135 143 143 GLU GLU B . n B 2 136 LEU 136 144 144 LEU LEU B . n B 2 137 LYS 137 145 145 LYS LYS B . n B 2 138 SER 138 146 146 SER SER B . n B 2 139 VAL 139 147 147 VAL VAL B . n B 2 140 GLY 140 148 148 GLY GLY B . n B 2 141 ILE 141 149 149 ILE ILE B . n B 2 142 PRO 142 150 150 PRO PRO B . n B 2 143 ALA 143 151 151 ALA ALA B . n B 2 144 ALA 144 152 152 ALA ALA B . n B 2 145 ILE 145 153 153 ILE ILE B . n B 2 146 GLU 146 154 154 GLU GLU B . n B 2 147 LYS 147 155 155 LYS LYS B . n B 2 148 GLY 148 156 156 GLY GLY B . n B 2 149 LYS 149 157 157 LYS LYS B . n B 2 150 ILE 150 158 158 ILE ILE B . n B 2 151 ALA 151 159 159 ALA ALA B . n B 2 152 ILE 152 160 160 ILE ILE B . n B 2 153 LYS 153 161 161 LYS LYS B . n B 2 154 GLU 154 162 162 GLU GLU B . n B 2 155 ASP 155 163 163 ASP ASP B . n B 2 156 LYS 156 164 164 LYS LYS B . n B 2 157 VAL 157 165 165 VAL VAL B . n B 2 158 VAL 158 166 166 VAL VAL B . n B 2 159 VAL 159 167 167 VAL VAL B . n B 2 160 LYS 160 168 168 LYS LYS B . n B 2 161 LYS 161 169 169 LYS LYS B . n B 2 162 GLY 162 170 170 GLY GLY B . n B 2 163 GLU 163 171 171 GLU GLU B . n B 2 164 VAL 164 172 172 VAL VAL B . n B 2 165 VAL 165 173 173 VAL VAL B . n B 2 166 SER 166 174 174 SER SER B . n B 2 167 PRO 167 175 175 PRO PRO B . n B 2 168 LYS 168 176 176 LYS LYS B . n B 2 169 LEU 169 177 177 LEU LEU B . n B 2 170 ALA 170 178 178 ALA ALA B . n B 2 171 ALA 171 179 179 ALA ALA B . n B 2 172 VAL 172 180 180 VAL VAL B . n B 2 173 LEU 173 181 181 LEU LEU B . n B 2 174 ASP 174 182 182 ASP ASP B . n B 2 175 ARG 175 183 183 ARG ARG B . n B 2 176 LEU 176 184 184 LEU LEU B . n B 2 177 GLY 177 185 185 GLY GLY B . n B 2 178 ILE 178 186 186 ILE ILE B . n B 2 179 LYS 179 187 187 LYS LYS B . n B 2 180 PRO 180 188 188 PRO PRO B . n B 2 181 ILE 181 189 189 ILE ILE B . n B 2 182 LYS 182 190 190 LYS LYS B . n B 2 183 VAL 183 191 191 VAL VAL B . n B 2 184 GLY 184 192 192 GLY GLY B . n B 2 185 LEU 185 193 193 LEU LEU B . n B 2 186 ASN 186 194 194 ASN ASN B . n B 2 187 ILE 187 195 195 ILE ILE B . n B 2 188 LEU 188 196 196 LEU LEU B . n B 2 189 ALA 189 197 197 ALA ALA B . n B 2 190 VAL 190 198 198 VAL VAL B . n B 2 191 TYR 191 199 199 TYR TYR B . n B 2 192 GLU 192 200 200 GLU GLU B . n B 2 193 ASP 193 201 201 ASP ASP B . n B 2 194 GLY 194 202 202 GLY GLY B . n B 2 195 ILE 195 203 203 ILE ILE B . n B 2 196 ILE 196 204 204 ILE ILE B . n B 2 197 TYR 197 205 205 TYR TYR B . n B 2 198 THR 198 206 206 THR THR B . n B 2 199 PRO 199 207 207 PRO PRO B . n B 2 200 ASP 200 208 208 ASP ASP B . n B 2 201 VAL 201 209 209 VAL VAL B . n B 2 202 LEU 202 210 210 LEU LEU B . n B 2 203 LYS 203 211 211 LYS LYS B . n B 2 204 VAL 204 212 212 VAL VAL B . n B 2 205 ASP 205 213 213 ASP ASP B . n B 2 206 GLU 206 214 214 GLU GLU B . n B 2 207 GLU 207 215 215 GLU GLU B . n B 2 208 LYS 208 216 ? ? ? B . n B 2 209 LEU 209 217 ? ? ? B . n B 2 210 LEU 210 218 ? ? ? B . n B 2 211 ALA 211 219 ? ? ? B . n B 2 212 ASP 212 220 ? ? ? B . n B 2 213 ILE 213 221 ? ? ? B . n C 3 1 MSE 1 0 ? ? ? C . n C 3 2 ALA 2 1 1 ALA ALA C . n C 3 3 LYS 3 2 2 LYS LYS C . n C 3 4 GLU 4 3 3 GLU GLU C . n C 3 5 VAL 5 4 4 VAL VAL C . n C 3 6 VAL 6 5 5 VAL VAL C . n C 3 7 GLU 7 6 6 GLU GLU C . n C 3 8 VAL 8 7 7 VAL VAL C . n C 3 9 LEU 9 8 8 LEU LEU C . n C 3 10 VAL 10 9 9 VAL VAL C . n C 3 11 THR 11 10 10 THR THR C . n C 3 12 GLY 12 11 11 GLY GLY C . n C 3 13 GLY 13 12 12 GLY GLY C . n C 3 14 ARG 14 13 13 ARG ARG C . n C 3 15 ALA 15 14 14 ALA ALA C . n C 3 16 THR 16 15 15 THR THR C . n C 3 17 ALA 17 16 16 ALA ALA C . n C 3 18 GLY 18 17 17 GLY GLY C . n C 3 19 PRO 19 18 18 PRO PRO C . n C 3 20 PRO 20 19 19 PRO PRO C . n C 3 21 LEU 21 20 20 LEU LEU C . n C 3 22 GLY 22 21 21 GLY GLY C . n C 3 23 PRO 23 22 22 PRO PRO C . n C 3 24 ALA 24 23 23 ALA ALA C . n C 3 25 ILE 25 24 24 ILE ILE C . n C 3 26 GLY 26 25 25 GLY GLY C . n C 3 27 PRO 27 26 26 PRO PRO C . n C 3 28 LEU 28 27 27 LEU LEU C . n C 3 29 GLY 29 28 28 GLY GLY C . n C 3 30 VAL 30 29 29 VAL VAL C . n C 3 31 ASN 31 30 30 ASN ASN C . n C 3 32 VAL 32 31 31 VAL VAL C . n C 3 33 MSE 33 32 32 MSE MSE C . n C 3 34 GLN 34 33 33 GLN GLN C . n C 3 35 VAL 35 34 34 VAL VAL C . n C 3 36 VAL 36 35 35 VAL VAL C . n C 3 37 LYS 37 36 36 LYS LYS C . n C 3 38 GLU 38 37 37 GLU GLU C . n C 3 39 ILE 39 38 38 ILE ILE C . n C 3 40 ASN 40 39 39 ASN ASN C . n C 3 41 GLU 41 40 40 GLU GLU C . n C 3 42 LYS 42 41 41 LYS LYS C . n C 3 43 THR 43 42 42 THR THR C . n C 3 44 LYS 44 43 43 LYS LYS C . n C 3 45 ASP 45 44 44 ASP ASP C . n C 3 46 TYR 46 45 45 TYR TYR C . n C 3 47 GLU 47 46 46 GLU GLU C . n C 3 48 GLY 48 47 47 GLY GLY C . n C 3 49 MSE 49 48 48 MSE MSE C . n C 3 50 GLN 50 49 49 GLN GLN C . n C 3 51 VAL 51 50 50 VAL VAL C . n C 3 52 PRO 52 51 51 PRO PRO C . n C 3 53 VAL 53 52 52 VAL VAL C . n C 3 54 LYS 54 53 53 LYS LYS C . n C 3 55 VAL 55 54 54 VAL VAL C . n C 3 56 ILE 56 55 55 ILE ILE C . n C 3 57 VAL 57 56 56 VAL VAL C . n C 3 58 ASP 58 57 57 ASP ASP C . n C 3 59 THR 59 58 58 THR THR C . n C 3 60 GLU 60 59 59 GLU GLU C . n C 3 61 THR 61 60 60 THR THR C . n C 3 62 ARG 62 61 61 ARG ARG C . n C 3 63 LYS 63 62 62 LYS LYS C . n C 3 64 PHE 64 63 63 PHE PHE C . n C 3 65 GLU 65 64 64 GLU GLU C . n C 3 66 ILE 66 65 65 ILE ILE C . n C 3 67 GLU 67 66 66 GLU GLU C . n C 3 68 VAL 68 67 67 VAL VAL C . n C 3 69 GLY 69 68 68 GLY GLY C . n C 3 70 ILE 70 69 69 ILE ILE C . n C 3 71 PRO 71 70 70 PRO PRO C . n C 3 72 PRO 72 71 71 PRO PRO C . n C 3 73 THR 73 72 72 THR THR C . n C 3 74 THR 74 73 73 THR THR C . n C 3 75 ALA 75 74 74 ALA ALA C . n C 3 76 LEU 76 75 75 LEU LEU C . n C 3 77 ILE 77 76 76 ILE ILE C . n C 3 78 LYS 78 77 77 LYS LYS C . n C 3 79 LYS 79 78 78 LYS LYS C . n C 3 80 GLU 80 79 79 GLU GLU C . n C 3 81 LEU 81 80 80 LEU LEU C . n C 3 82 GLY 82 81 81 GLY GLY C . n C 3 83 ILE 83 82 82 ILE ILE C . n C 3 84 GLU 84 83 83 GLU GLU C . n C 3 85 THR 85 84 84 THR THR C . n C 3 86 ALA 86 85 85 ALA ALA C . n C 3 87 ALA 87 86 86 ALA ALA C . n C 3 88 HIS 88 87 87 HIS HIS C . n C 3 89 GLU 89 88 88 GLU GLU C . n C 3 90 PRO 90 89 89 PRO PRO C . n C 3 91 ARG 91 90 90 ARG ARG C . n C 3 92 HIS 92 91 91 HIS HIS C . n C 3 93 GLU 93 92 92 GLU GLU C . n C 3 94 VAL 94 93 93 VAL VAL C . n C 3 95 VAL 95 94 94 VAL VAL C . n C 3 96 GLY 96 95 95 GLY GLY C . n C 3 97 ASN 97 96 96 ASN ASN C . n C 3 98 LEU 98 97 97 LEU LEU C . n C 3 99 THR 99 98 98 THR THR C . n C 3 100 LEU 100 99 99 LEU LEU C . n C 3 101 GLU 101 100 100 GLU GLU C . n C 3 102 GLN 102 101 101 GLN GLN C . n C 3 103 VAL 103 102 102 VAL VAL C . n C 3 104 ILE 104 103 103 ILE ILE C . n C 3 105 LYS 105 104 104 LYS LYS C . n C 3 106 ILE 106 105 105 ILE ILE C . n C 3 107 ALA 107 106 106 ALA ALA C . n C 3 108 LYS 108 107 107 LYS LYS C . n C 3 109 MSE 109 108 108 MSE MSE C . n C 3 110 LYS 110 109 109 LYS LYS C . n C 3 111 LYS 111 110 110 LYS LYS C . n C 3 112 ASP 112 111 111 ASP ASP C . n C 3 113 ALA 113 112 112 ALA ALA C . n C 3 114 MSE 114 113 113 MSE MSE C . n C 3 115 LEU 115 114 114 LEU LEU C . n C 3 116 SER 116 115 115 SER SER C . n C 3 117 TYR 117 116 116 TYR TYR C . n C 3 118 THR 118 117 117 THR THR C . n C 3 119 LEU 119 118 118 LEU LEU C . n C 3 120 LYS 120 119 119 LYS LYS C . n C 3 121 ASN 121 120 120 ASN ASN C . n C 3 122 ALA 122 121 121 ALA ALA C . n C 3 123 VAL 123 122 122 VAL VAL C . n C 3 124 LYS 124 123 123 LYS LYS C . n C 3 125 GLU 125 124 124 GLU GLU C . n C 3 126 VAL 126 125 125 VAL VAL C . n C 3 127 LEU 127 126 126 LEU LEU C . n C 3 128 GLY 128 127 127 GLY GLY C . n C 3 129 THR 129 128 128 THR THR C . n C 3 130 CYS 130 129 129 CYS CYS C . n C 3 131 GLY 131 130 130 GLY GLY C . n C 3 132 SER 132 131 131 SER SER C . n C 3 133 MSE 133 132 132 MSE MSE C . n C 3 134 GLY 134 133 133 GLY GLY C . n C 3 135 VAL 135 134 134 VAL VAL C . n C 3 136 THR 136 135 135 THR THR C . n C 3 137 VAL 137 136 136 VAL VAL C . n C 3 138 GLU 138 137 137 GLU GLU C . n C 3 139 GLY 139 138 138 GLY GLY C . n C 3 140 LYS 140 139 139 LYS LYS C . n C 3 141 ASP 141 140 140 ASP ASP C . n C 3 142 PRO 142 141 141 PRO PRO C . n C 3 143 LYS 143 142 142 LYS LYS C . n C 3 144 GLU 144 143 143 GLU GLU C . n C 3 145 VAL 145 144 144 VAL VAL C . n C 3 146 GLN 146 145 145 GLN GLN C . n C 3 147 LYS 147 146 146 LYS LYS C . n C 3 148 GLU 148 147 147 GLU GLU C . n C 3 149 ILE 149 148 148 ILE ILE C . n C 3 150 ASP 150 149 149 ASP ASP C . n C 3 151 ALA 151 150 150 ALA ALA C . n C 3 152 GLY 152 151 151 GLY GLY C . n C 3 153 VAL 153 152 152 VAL VAL C . n C 3 154 TYR 154 153 153 TYR TYR C . n C 3 155 ASP 155 154 154 ASP ASP C . n C 3 156 GLU 156 155 155 GLU GLU C . n C 3 157 TYR 157 156 156 TYR TYR C . n C 3 158 PHE 158 157 157 PHE PHE C . n C 3 159 LYS 159 158 158 LYS LYS C . n C 3 160 GLU 160 159 ? ? ? C . n C 3 161 GLU 161 160 ? ? ? C . n D 4 1 QUA 1 0 0 QUA QUA D . n D 4 2 ILE 2 1 1 ILE ILE D . n D 4 3 ALA 3 2 2 ALA ALA D . n D 4 4 DHA 4 3 3 DHA DHA D . n D 4 5 ALA 5 4 4 ALA ALA D . n D 4 6 SER 6 5 5 SER SER D . n D 4 7 BB9 7 6 6 BB9 BB9 D . n D 4 8 THR 8 7 7 THR THR D . n D 4 9 DBU 9 8 8 DBU DBU D . n D 4 10 DCY 10 9 9 DCY DCY D . n D 4 11 TS9 11 10 10 TS9 TS9 D . n D 4 12 BB9 12 11 11 BB9 BB9 D . n D 4 13 THR 13 12 12 THR THR D . n D 4 14 BB9 14 13 13 BB9 BB9 D . n D 4 15 MH6 15 14 14 MH6 MH6 D . n D 4 16 BB9 16 15 15 BB9 BB9 D . n D 4 17 DHA 17 16 16 DHA DHA D . n D 4 18 DHA 18 17 17 DHA DHA D . n D 4 19 NH2 19 18 18 NH2 NH2 D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 1301 1 MG MG A . F 5 MG 1 1302 2 MG MG A . G 5 MG 1 1303 3 MG MG A . H 5 MG 1 1304 5 MG MG A . I 5 MG 1 1305 6 MG MG A . J 5 MG 1 1306 7 MG MG A . K 5 MG 1 1307 8 MG MG A . L 5 MG 1 1308 11 MG MG A . M 5 MG 1 1309 12 MG MG A . N 5 MG 1 1310 13 MG MG A . O 6 NA 1 1311 4 NA NA A . P 6 NA 1 1312 5 NA NA A . Q 6 NA 1 1313 6 NA NA A . R 7 TRS 1 1314 2 TRS TRS A . S 7 TRS 1 1315 3 TRS TRS A . T 6 NA 1 301 2 NA NA B . U 7 TRS 1 302 1 TRS TRS B . V 5 MG 1 201 9 MG MG C . W 8 HOH 1 1401 14 HOH HOH A . W 8 HOH 2 1402 79 HOH HOH A . W 8 HOH 3 1403 3 HOH HOH A . W 8 HOH 4 1404 36 HOH HOH A . W 8 HOH 5 1405 16 HOH HOH A . W 8 HOH 6 1406 64 HOH HOH A . W 8 HOH 7 1407 53 HOH HOH A . W 8 HOH 8 1408 42 HOH HOH A . W 8 HOH 9 1409 1 HOH HOH A . W 8 HOH 10 1410 54 HOH HOH A . W 8 HOH 11 1411 71 HOH HOH A . W 8 HOH 12 1412 27 HOH HOH A . W 8 HOH 13 1413 20 HOH HOH A . W 8 HOH 14 1414 80 HOH HOH A . W 8 HOH 15 1415 47 HOH HOH A . W 8 HOH 16 1416 12 HOH HOH A . W 8 HOH 17 1417 8 HOH HOH A . W 8 HOH 18 1418 45 HOH HOH A . W 8 HOH 19 1419 73 HOH HOH A . W 8 HOH 20 1420 5 HOH HOH A . W 8 HOH 21 1421 65 HOH HOH A . W 8 HOH 22 1422 17 HOH HOH A . W 8 HOH 23 1423 55 HOH HOH A . W 8 HOH 24 1424 18 HOH HOH A . W 8 HOH 25 1425 23 HOH HOH A . W 8 HOH 26 1426 70 HOH HOH A . W 8 HOH 27 1427 39 HOH HOH A . W 8 HOH 28 1428 11 HOH HOH A . W 8 HOH 29 1429 9 HOH HOH A . W 8 HOH 30 1430 77 HOH HOH A . W 8 HOH 31 1431 15 HOH HOH A . W 8 HOH 32 1432 13 HOH HOH A . W 8 HOH 33 1433 46 HOH HOH A . W 8 HOH 34 1434 10 HOH HOH A . W 8 HOH 35 1435 41 HOH HOH A . W 8 HOH 36 1436 26 HOH HOH A . W 8 HOH 37 1437 63 HOH HOH A . W 8 HOH 38 1438 68 HOH HOH A . W 8 HOH 39 1439 21 HOH HOH A . W 8 HOH 40 1440 4 HOH HOH A . W 8 HOH 41 1441 67 HOH HOH A . W 8 HOH 42 1442 2 HOH HOH A . W 8 HOH 43 1443 75 HOH HOH A . W 8 HOH 44 1444 66 HOH HOH A . W 8 HOH 45 1445 24 HOH HOH A . W 8 HOH 46 1446 29 HOH HOH A . W 8 HOH 47 1447 58 HOH HOH A . W 8 HOH 48 1448 19 HOH HOH A . W 8 HOH 49 1449 72 HOH HOH A . W 8 HOH 50 1450 78 HOH HOH A . W 8 HOH 51 1451 22 HOH HOH A . W 8 HOH 52 1452 81 HOH HOH A . W 8 HOH 53 1453 28 HOH HOH A . W 8 HOH 54 1454 6 HOH HOH A . W 8 HOH 55 1455 76 HOH HOH A . W 8 HOH 56 1456 61 HOH HOH A . W 8 HOH 57 1457 38 HOH HOH A . W 8 HOH 58 1458 74 HOH HOH A . X 8 HOH 1 401 44 HOH HOH B . X 8 HOH 2 402 69 HOH HOH B . X 8 HOH 3 403 59 HOH HOH B . X 8 HOH 4 404 51 HOH HOH B . Y 8 HOH 1 301 49 HOH HOH C . Y 8 HOH 2 302 62 HOH HOH C . Y 8 HOH 3 303 48 HOH HOH C . # _pdbx_molecule_features.prd_id PRD_000223 _pdbx_molecule_features.name THIOSTREPTON _pdbx_molecule_features.type Thiopeptide _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;Thiostrepton is a hetrocyclic thiopeptide belonging to the thiocillin family, consisting of four thiazole, one thiozoline and one piperideine rings. A modified quinoline linked to main-chain residue 1 and side-chain of residue 12. Post translational maturation of thiazole and oxazole containing antibiotics involves the enzymic condensation of a Cys or Ser with the alpha-carbonyl of the preceding amino acid to form a thioether or ether bond, then dehydration to form a double bond with the alpha-amino nitrogen. Thiazoline or oxazoline ring are dehydrogenated to form thiazole or oxazole rings. the pyridinyl involves the cross-linking of a Ser and a Cys-Ser pair usually separated by 7 or 8 residues along the peptide chain. The Ser residues are dehydrated to didehydroalanines, then bonded between their beta carbons. The alpha carbonyl of the Cys condenses with alpha carbon of the first Ser to form a pyridinyl ring. The ring may be mutiply dehydrogenated to form a pyridine ring with loss of the amino nitrogen of the first Ser. The amidation of Ser-17 probably does not occur by the same mechanism, oxidative cleavage of glycine, as in eukaryotes. ; # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000223 _pdbx_molecule.asym_id D # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B MSE 27 B MSE 35 ? MET 'modified residue' 2 B MSE 28 B MSE 36 ? MET 'modified residue' 3 B MSE 50 B MSE 58 ? MET 'modified residue' 4 B MSE 90 B MSE 98 ? MET 'modified residue' 5 B MSE 127 B MSE 135 ? MET 'modified residue' 6 C MSE 33 C MSE 32 ? MET 'modified residue' 7 C MSE 49 C MSE 48 ? MET 'modified residue' 8 C MSE 109 C MSE 108 ? MET 'modified residue' 9 C MSE 114 C MSE 113 ? MET 'modified residue' 10 C MSE 133 C MSE 132 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8810 ? 1 MORE -170 ? 1 'SSA (A^2)' 27490 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 7 ? A G 1157 ? 1_555 MG ? M MG . ? A MG 1309 ? 1_555 O ? W HOH . ? A HOH 1426 ? 1_555 122.8 ? 2 O6 ? A G 7 ? A G 1157 ? 1_555 MG ? M MG . ? A MG 1309 ? 1_555 O ? W HOH . ? A HOH 1452 ? 1_555 90.6 ? 3 O ? W HOH . ? A HOH 1426 ? 1_555 MG ? M MG . ? A MG 1309 ? 1_555 O ? W HOH . ? A HOH 1452 ? 1_555 139.8 ? 4 O6 ? A G 7 ? A G 1157 ? 1_555 MG ? M MG . ? A MG 1309 ? 1_555 O ? W HOH . ? A HOH 1456 ? 1_555 127.4 ? 5 O ? W HOH . ? A HOH 1426 ? 1_555 MG ? M MG . ? A MG 1309 ? 1_555 O ? W HOH . ? A HOH 1456 ? 1_555 72.8 ? 6 O ? W HOH . ? A HOH 1452 ? 1_555 MG ? M MG . ? A MG 1309 ? 1_555 O ? W HOH . ? A HOH 1456 ? 1_555 106.1 ? 7 O6 ? A G 16 ? A G 1166 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1417 ? 1_555 68.7 ? 8 O6 ? A G 16 ? A G 1166 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1405 ? 1_555 67.6 ? 9 O ? W HOH . ? A HOH 1417 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1405 ? 1_555 78.8 ? 10 O6 ? A G 16 ? A G 1166 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1414 ? 1_555 70.4 ? 11 O ? W HOH . ? A HOH 1417 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1414 ? 1_555 139.1 ? 12 O ? W HOH . ? A HOH 1405 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1414 ? 1_555 86.1 ? 13 O6 ? A G 16 ? A G 1166 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1434 ? 1_555 152.4 ? 14 O ? W HOH . ? A HOH 1417 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1434 ? 1_555 138.4 ? 15 O ? W HOH . ? A HOH 1405 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1434 ? 1_555 107.6 ? 16 O ? W HOH . ? A HOH 1414 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1434 ? 1_555 82.3 ? 17 O6 ? A G 16 ? A G 1166 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1429 ? 1_555 82.2 ? 18 O ? W HOH . ? A HOH 1417 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1429 ? 1_555 102.3 ? 19 O ? W HOH . ? A HOH 1405 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1429 ? 1_555 147.3 ? 20 O ? W HOH . ? A HOH 1414 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1429 ? 1_555 71.7 ? 21 O ? W HOH . ? A HOH 1434 ? 1_555 MG ? E MG . ? A MG 1301 ? 1_555 O ? W HOH . ? A HOH 1429 ? 1_555 93.3 ? 22 OP2 ? A G 19 ? A G 1169 ? 1_555 NA ? P NA . ? A NA 1312 ? 1_555 OP2 ? A U 21 ? A U 1171 ? 1_555 102.8 ? 23 "O3'" ? A A 29 ? A A 1179 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 OP2 ? A A 30 ? A A 1180 ? 1_555 51.4 ? 24 "O3'" ? A A 29 ? A A 1179 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 "O5'" ? A A 30 ? A A 1180 ? 1_555 53.5 ? 25 OP2 ? A A 30 ? A A 1180 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 "O5'" ? A A 30 ? A A 1180 ? 1_555 46.9 ? 26 "O3'" ? A A 29 ? A A 1179 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 OP1 ? A C 32 ? A C 1182 ? 1_555 126.3 ? 27 OP2 ? A A 30 ? A A 1180 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 OP1 ? A C 32 ? A C 1182 ? 1_555 79.2 ? 28 "O5'" ? A A 30 ? A A 1180 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 OP1 ? A C 32 ? A C 1182 ? 1_555 78.8 ? 29 "O3'" ? A A 29 ? A A 1179 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 O ? W HOH . ? A HOH 1401 ? 1_555 149.8 ? 30 OP2 ? A A 30 ? A A 1180 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 O ? W HOH . ? A HOH 1401 ? 1_555 118.6 ? 31 "O5'" ? A A 30 ? A A 1180 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 O ? W HOH . ? A HOH 1401 ? 1_555 146.2 ? 32 OP1 ? A C 32 ? A C 1182 ? 1_555 NA ? Q NA . ? A NA 1313 ? 1_555 O ? W HOH . ? A HOH 1401 ? 1_555 67.7 ? 33 OP2 ? A A 30 ? A A 1180 ? 1_555 MG ? G MG . ? A MG 1303 ? 1_555 OP1 ? A C 32 ? A C 1182 ? 1_555 112.8 ? 34 OP2 ? A A 30 ? A A 1180 ? 1_555 MG ? G MG . ? A MG 1303 ? 1_555 O ? W HOH . ? A HOH 1432 ? 1_555 84.8 ? 35 OP1 ? A C 32 ? A C 1182 ? 1_555 MG ? G MG . ? A MG 1303 ? 1_555 O ? W HOH . ? A HOH 1432 ? 1_555 73.7 ? 36 OP2 ? A A 30 ? A A 1180 ? 1_555 MG ? G MG . ? A MG 1303 ? 1_555 O ? W HOH . ? A HOH 1437 ? 1_555 162.7 ? 37 OP1 ? A C 32 ? A C 1182 ? 1_555 MG ? G MG . ? A MG 1303 ? 1_555 O ? W HOH . ? A HOH 1437 ? 1_555 80.4 ? 38 O ? W HOH . ? A HOH 1432 ? 1_555 MG ? G MG . ? A MG 1303 ? 1_555 O ? W HOH . ? A HOH 1437 ? 1_555 88.8 ? 39 OP2 ? A A 33 ? A A 1183 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O4 ? A U 54 ? A U 1204 ? 1_555 152.7 ? 40 OP2 ? A A 33 ? A A 1183 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1409 ? 1_555 129.9 ? 41 O4 ? A U 54 ? A U 1204 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1409 ? 1_555 68.3 ? 42 OP2 ? A A 33 ? A A 1183 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1416 ? 1_555 72.2 ? 43 O4 ? A U 54 ? A U 1204 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1416 ? 1_555 88.5 ? 44 O ? W HOH . ? A HOH 1409 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1416 ? 1_555 92.3 ? 45 OP2 ? A A 33 ? A A 1183 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1422 ? 1_555 73.0 ? 46 O4 ? A U 54 ? A U 1204 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1422 ? 1_555 86.7 ? 47 O ? W HOH . ? A HOH 1409 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1422 ? 1_555 154.9 ? 48 O ? W HOH . ? A HOH 1416 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1422 ? 1_555 85.2 ? 49 OP2 ? A A 33 ? A A 1183 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1428 ? 1_555 114.0 ? 50 O4 ? A U 54 ? A U 1204 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1428 ? 1_555 86.1 ? 51 O ? W HOH . ? A HOH 1409 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1428 ? 1_555 82.5 ? 52 O ? W HOH . ? A HOH 1416 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1428 ? 1_555 173.6 ? 53 O ? W HOH . ? A HOH 1422 ? 1_555 MG ? F MG . ? A MG 1302 ? 1_555 O ? W HOH . ? A HOH 1428 ? 1_555 97.9 ? 54 O ? C LYS 111 ? C LYS 110 ? 1_555 MG ? V MG . ? C MG 201 ? 1_555 O ? C MSE 114 ? C MSE 113 ? 1_555 77.9 ? 55 O ? C LYS 111 ? C LYS 110 ? 1_555 MG ? V MG . ? C MG 201 ? 1_555 O ? C SER 116 ? C SER 115 ? 1_555 90.9 ? 56 O ? C MSE 114 ? C MSE 113 ? 1_555 MG ? V MG . ? C MG 201 ? 1_555 O ? C SER 116 ? C SER 115 ? 1_555 105.2 ? 57 O ? C LYS 111 ? C LYS 110 ? 1_555 MG ? V MG . ? C MG 201 ? 1_555 O ? Y HOH . ? C HOH 303 ? 1_555 87.7 ? 58 O ? C MSE 114 ? C MSE 113 ? 1_555 MG ? V MG . ? C MG 201 ? 1_555 O ? Y HOH . ? C HOH 303 ? 1_555 81.6 ? 59 O ? C SER 116 ? C SER 115 ? 1_555 MG ? V MG . ? C MG 201 ? 1_555 O ? Y HOH . ? C HOH 303 ? 1_555 172.6 ? 60 O ? W HOH . ? A HOH 1420 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1431 ? 1_555 88.0 ? 61 O ? W HOH . ? A HOH 1420 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1440 ? 1_555 96.4 ? 62 O ? W HOH . ? A HOH 1431 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1440 ? 1_555 79.8 ? 63 O ? W HOH . ? A HOH 1420 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1442 ? 1_555 172.9 ? 64 O ? W HOH . ? A HOH 1431 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1442 ? 1_555 85.3 ? 65 O ? W HOH . ? A HOH 1440 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1442 ? 1_555 84.8 ? 66 O ? W HOH . ? A HOH 1420 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1454 ? 1_555 93.1 ? 67 O ? W HOH . ? A HOH 1431 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1454 ? 1_555 178.8 ? 68 O ? W HOH . ? A HOH 1440 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1454 ? 1_555 99.8 ? 69 O ? W HOH . ? A HOH 1442 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1454 ? 1_555 93.6 ? 70 O ? W HOH . ? A HOH 1420 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1403 ? 1_555 96.2 ? 71 O ? W HOH . ? A HOH 1431 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1403 ? 1_555 93.8 ? 72 O ? W HOH . ? A HOH 1440 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1403 ? 1_555 165.6 ? 73 O ? W HOH . ? A HOH 1442 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1403 ? 1_555 81.9 ? 74 O ? W HOH . ? A HOH 1454 ? 1_555 MG ? H MG . ? A MG 1304 ? 1_555 O ? W HOH . ? A HOH 1403 ? 1_555 86.4 ? 75 O ? W HOH . ? A HOH 1413 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1424 ? 1_555 87.0 ? 76 O ? W HOH . ? A HOH 1413 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1425 ? 1_555 72.1 ? 77 O ? W HOH . ? A HOH 1424 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1425 ? 1_555 80.9 ? 78 O ? W HOH . ? A HOH 1413 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1439 ? 1_555 141.7 ? 79 O ? W HOH . ? A HOH 1424 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1439 ? 1_555 92.8 ? 80 O ? W HOH . ? A HOH 1425 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1439 ? 1_555 70.1 ? 81 O ? W HOH . ? A HOH 1413 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1448 ? 1_555 72.2 ? 82 O ? W HOH . ? A HOH 1424 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1448 ? 1_555 146.0 ? 83 O ? W HOH . ? A HOH 1425 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1448 ? 1_555 67.5 ? 84 O ? W HOH . ? A HOH 1439 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1448 ? 1_555 87.9 ? 85 O ? W HOH . ? A HOH 1413 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1451 ? 1_555 83.3 ? 86 O ? W HOH . ? A HOH 1424 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1451 ? 1_555 102.3 ? 87 O ? W HOH . ? A HOH 1425 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1451 ? 1_555 155.1 ? 88 O ? W HOH . ? A HOH 1439 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1451 ? 1_555 133.6 ? 89 O ? W HOH . ? A HOH 1448 ? 1_555 MG ? I MG . ? A MG 1305 ? 1_555 O ? W HOH . ? A HOH 1451 ? 1_555 101.6 ? 90 O ? W HOH . ? A HOH 1412 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1436 ? 1_555 81.5 ? 91 O ? W HOH . ? A HOH 1412 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1445 ? 1_555 85.8 ? 92 O ? W HOH . ? A HOH 1436 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1445 ? 1_555 164.3 ? 93 O ? W HOH . ? A HOH 1412 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1446 ? 1_555 83.6 ? 94 O ? W HOH . ? A HOH 1436 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1446 ? 1_555 73.9 ? 95 O ? W HOH . ? A HOH 1445 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1446 ? 1_555 113.8 ? 96 O ? W HOH . ? A HOH 1412 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1449 ? 1_555 76.6 ? 97 O ? W HOH . ? A HOH 1436 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1449 ? 1_555 85.1 ? 98 O ? W HOH . ? A HOH 1445 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1449 ? 1_555 83.1 ? 99 O ? W HOH . ? A HOH 1446 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1449 ? 1_555 153.0 ? 100 O ? W HOH . ? A HOH 1412 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1453 ? 1_555 170.0 ? 101 O ? W HOH . ? A HOH 1436 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1453 ? 1_555 91.1 ? 102 O ? W HOH . ? A HOH 1445 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1453 ? 1_555 102.5 ? 103 O ? W HOH . ? A HOH 1446 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1453 ? 1_555 87.9 ? 104 O ? W HOH . ? A HOH 1449 ? 1_555 MG ? J MG . ? A MG 1306 ? 1_555 O ? W HOH . ? A HOH 1453 ? 1_555 109.7 ? 105 O ? W HOH . ? A HOH 1408 ? 1_555 MG ? K MG . ? A MG 1307 ? 1_555 O ? W HOH . ? A HOH 1427 ? 1_555 85.5 ? 106 O ? W HOH . ? A HOH 1408 ? 1_555 MG ? K MG . ? A MG 1307 ? 1_555 O ? W HOH . ? A HOH 1435 ? 1_555 163.6 ? 107 O ? W HOH . ? A HOH 1427 ? 1_555 MG ? K MG . ? A MG 1307 ? 1_555 O ? W HOH . ? A HOH 1435 ? 1_555 103.2 ? 108 O ? W HOH . ? A HOH 1421 ? 1_555 MG ? L MG . ? A MG 1308 ? 1_555 O ? W HOH . ? A HOH 1438 ? 1_555 89.0 ? 109 O ? W HOH . ? A HOH 1421 ? 1_555 MG ? L MG . ? A MG 1308 ? 1_555 O ? W HOH . ? A HOH 1441 ? 1_555 91.5 ? 110 O ? W HOH . ? A HOH 1438 ? 1_555 MG ? L MG . ? A MG 1308 ? 1_555 O ? W HOH . ? A HOH 1441 ? 1_555 163.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-24 2 'Structure model' 1 1 2016-12-14 3 'Structure model' 1 2 2016-12-21 4 'Structure model' 1 3 2019-04-10 5 'Structure model' 2 0 2019-04-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Non-polymer description' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Polymer sequence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 4 'Structure model' pdbx_validate_polymer_linkage 3 4 'Structure model' struct_ref 4 5 'Structure model' database_PDB_rev 5 5 'Structure model' database_PDB_rev_record 6 5 'Structure model' entity_poly 7 5 'Structure model' pdbx_seq_map_depositor_info # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_struct_ref.db_code' 2 5 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 3 5 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_entry_details.entry_id 5D8H _pdbx_entry_details.compound_details ;THIOSTREPTON IS A MEMBER OF A SULPHUR-RICH HETEROCYCLIC PEPTIDES CLASS. ALL SHARE A MACROCYLIC CORE, CONSISTING OF A NITROGEN CONTAINING, SIX-MEMBERED RING CENTRAL TO DEHYDROAMINO ACIDS AND A SUBSET OF FIVE MEMBER RING STRUCTURES INCLUDING THIAZOLES, THIAZOLINES AND OXAZOLES. HERE, THIOSTREPTON IS REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 MG A MG 1310 ? ? O A HOH 1430 ? ? 1.48 2 1 MG A MG 1310 ? ? O A HOH 1450 ? ? 1.49 3 1 MG A MG 1310 ? ? O A HOH 1402 ? ? 1.59 4 1 MG A MG 1310 ? ? O A HOH 1458 ? ? 1.63 5 1 MG A MG 1308 ? ? O A HOH 1444 ? ? 1.67 6 1 MG A MG 1310 ? ? O A HOH 1443 ? ? 1.68 7 1 C7 D QUA 0 ? ? N D ILE 1 ? ? 1.68 8 1 MG A MG 1310 ? ? O A HOH 1455 ? ? 1.69 9 1 O C ASP 44 ? ? N C TYR 45 ? ? 1.76 10 1 O A HOH 1402 ? ? O A HOH 1450 ? ? 1.86 11 1 OP1 A A 1183 ? ? O A HOH 1401 ? ? 1.89 12 1 C11 D QUA 0 ? ? CB D THR 12 ? ? 1.99 13 1 O A HOH 1407 ? ? O A HOH 1410 ? ? 2.09 14 1 N D SER 5 ? ? C D BB9 13 ? ? 2.09 15 1 O A HOH 1443 ? ? O A HOH 1450 ? ? 2.11 16 1 O6 A G 1223 ? ? O A HOH 1402 ? ? 2.12 17 1 O A HOH 1402 ? ? O A HOH 1430 ? ? 2.13 18 1 O C PRO 18 ? ? N C GLY 21 ? ? 2.13 19 1 C2 D QUA 0 ? ? OG1 D THR 12 ? ? 2.13 20 1 O A HOH 1450 ? ? O A HOH 1455 ? ? 2.14 21 1 O A HOH 1412 ? ? O A HOH 1449 ? ? 2.19 22 1 O6 A G 1164 ? ? O A HOH 1403 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P A G 1151 ? ? OP3 A G 1151 ? ? 1.491 1.607 -0.116 0.012 N 2 1 C C LYS 41 ? ? N C THR 42 ? ? 1.516 1.336 0.180 0.023 Y 3 1 C C ASP 44 ? ? N C TYR 45 ? ? 0.915 1.336 -0.421 0.023 Y 4 1 C D ALA 2 ? ? N D DHA 3 ? ? 1.505 1.336 0.169 0.023 Y 5 1 C D BB9 11 ? ? N D THR 12 ? ? 1.170 1.336 -0.166 0.023 Y 6 1 C D BB9 13 ? ? N D MH6 14 ? ? 1.581 1.336 0.245 0.023 Y 7 1 C D BB9 15 ? ? N D DHA 16 ? ? 1.551 1.336 0.215 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 A G 1163 ? ? C6 A G 1163 ? ? O6 A G 1163 ? ? 115.58 119.90 -4.32 0.60 N 2 1 C5 A G 1163 ? ? C6 A G 1163 ? ? O6 A G 1163 ? ? 132.60 128.60 4.00 0.60 N 3 1 "O4'" A A 1179 ? ? "C1'" A A 1179 ? ? N9 A A 1179 ? ? 114.87 108.50 6.37 0.70 N 4 1 C8 A A 1205 ? ? N9 A A 1205 ? ? C4 A A 1205 ? ? 108.33 105.80 2.53 0.40 N 5 1 C5 A C 1216 ? ? C4 A C 1216 ? ? N4 A C 1216 ? ? 115.96 120.20 -4.24 0.70 N 6 1 C5 A C 1224 ? ? C4 A C 1224 ? ? N4 A C 1224 ? ? 115.93 120.20 -4.27 0.70 N 7 1 C B ALA 122 ? ? N B PRO 123 ? ? CA B PRO 123 ? ? 129.77 119.30 10.47 1.50 Y 8 1 C C GLY 17 ? ? N C PRO 18 ? ? CD C PRO 18 ? ? 133.82 120.60 13.22 2.20 Y 9 1 CB C ASN 30 ? ? CA C ASN 30 ? ? C C ASN 30 ? ? 123.48 110.40 13.08 2.00 N 10 1 O C ASP 44 ? ? C C ASP 44 ? ? N C TYR 45 ? ? 109.37 122.70 -13.33 1.60 Y 11 1 C C ASP 44 ? ? N C TYR 45 ? ? CA C TYR 45 ? ? 155.57 121.70 33.87 2.50 Y 12 1 N C GLU 59 ? ? CA C GLU 59 ? ? CB C GLU 59 ? ? 97.47 110.60 -13.13 1.80 N 13 1 OE1 C GLU 59 ? ? CD C GLU 59 ? ? OE2 C GLU 59 ? ? 115.39 123.30 -7.91 1.20 N 14 1 C C GLU 59 ? ? N C THR 60 ? ? CA C THR 60 ? ? 140.66 121.70 18.96 2.50 Y 15 1 CB C ARG 61 ? ? CA C ARG 61 ? ? C C ARG 61 ? ? 98.04 110.40 -12.36 2.00 N 16 1 O D DHA 17 ? ? C D DHA 17 ? ? N D NH2 18 ? ? 109.53 122.70 -13.17 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 37 ? ? 81.54 -4.50 2 1 ASN B 76 ? ? 39.80 62.53 3 1 ARG B 89 ? ? 61.93 -133.26 4 1 LYS B 127 ? ? 172.89 159.32 5 1 LYS B 164 ? ? -102.68 -166.36 6 1 ILE C 24 ? ? -121.48 -50.72 7 1 GLU C 59 ? ? -49.14 -73.23 8 1 ARG C 61 ? ? 90.94 -20.29 9 1 ARG C 90 ? ? 68.21 -7.94 10 1 VAL C 94 ? ? -131.41 -61.03 11 1 TYR C 153 ? ? -82.95 -74.15 12 1 ASP C 154 ? ? 62.34 -25.34 13 1 SER D 5 ? ? 65.12 76.28 14 1 DCY D 9 ? ? -118.87 -33.65 15 1 TS9 D 10 ? ? -89.59 -77.81 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ILE B 121 ? ? ALA B 122 ? ? -146.88 2 1 ILE B 126 ? ? LYS B 127 ? ? 129.74 3 1 LYS B 164 ? ? VAL B 165 ? ? 143.08 4 1 PRO C 18 ? ? PRO C 19 ? ? -135.49 5 1 VAL C 94 ? ? GLY C 95 ? ? 30.79 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C C ASP 44 ? ? N C TYR 45 ? ? 0.91 2 1 C11 D QUA 0 ? ? N D ILE 1 ? ? 6.29 3 1 C D BB9 11 ? ? N D THR 12 ? ? 1.17 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B LYS 216 ? B LYS 208 2 1 Y 1 B LEU 217 ? B LEU 209 3 1 Y 1 B LEU 218 ? B LEU 210 4 1 Y 1 B ALA 219 ? B ALA 211 5 1 Y 1 B ASP 220 ? B ASP 212 6 1 Y 1 B ILE 221 ? B ILE 213 7 1 Y 1 C MSE 0 ? C MSE 1 8 1 Y 1 C GLU 159 ? C GLU 160 9 1 Y 1 C GLU 160 ? C GLU 161 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5D8H 'double helix' 5D8H 'a-form double helix' 5D8H 'bulge loop' 5D8H 'mismatched base pair' 5D8H 'internal loop' 5D8H 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 74 1_555 -0.271 -0.006 0.032 -2.727 -4.329 -0.751 1 A_G1151:C1224_A A 1151 ? A 1224 ? 19 1 1 A C 2 1_555 A G 73 1_555 0.332 -0.283 -0.268 8.575 -9.320 -0.257 2 A_C1152:G1223_A A 1152 ? A 1223 ? 19 1 1 A C 3 1_555 A G 72 1_555 0.112 -0.095 -0.102 6.745 -0.799 0.505 3 A_C1153:G1222_A A 1153 ? A 1222 ? 19 1 1 A G 7 1_555 A A 71 1_555 6.408 -4.332 0.453 18.046 17.714 2.472 4 A_G1157:A1221_A A 1157 ? A 1221 ? 11 9 1 A A 8 1_555 A G 70 1_555 -6.805 -4.690 0.150 -25.189 -4.738 -8.220 5 A_A1158:G1220_A A 1158 ? A 1220 ? 11 10 1 A A 10 1_555 A C 69 1_555 -4.933 -1.313 1.815 8.510 6.210 14.650 6 A_A1160:C1219_A A 1160 ? A 1219 ? ? ? 1 A G 11 1_555 A U 68 1_555 -2.486 -0.768 0.509 3.120 -5.439 -0.897 7 A_G1161:U1218_A A 1161 ? A 1218 ? 28 1 1 A C 12 1_555 A G 67 1_555 0.191 -0.006 0.266 11.390 -15.153 1.668 8 A_C1162:G1217_A A 1162 ? A 1217 ? 19 1 1 A G 13 1_555 A C 66 1_555 0.055 0.192 0.190 3.385 -4.077 3.917 9 A_G1163:C1216_A A 1163 ? A 1216 ? 19 1 1 A G 14 1_555 A C 65 1_555 -0.488 -0.311 0.210 -2.128 -0.171 -0.301 10 A_G1164:C1215_A A 1164 ? A 1215 ? 19 1 1 A G 15 1_555 A C 64 1_555 0.077 -0.197 0.032 -6.789 -11.301 3.123 11 A_G1165:C1214_A A 1165 ? A 1214 ? 19 1 1 A G 16 1_555 A A 63 1_555 6.895 -4.435 0.129 -17.070 -11.421 -8.072 12 A_G1166:A1213_A A 1166 ? A 1213 ? 11 10 1 A G 47 1_555 A C 62 1_555 -0.668 -0.051 -0.400 -10.674 -1.553 3.928 13 A_G1197:C1212_A A 1197 ? A 1212 ? 19 1 1 A U 50 1_555 A U 61 1_555 -2.378 -2.011 -0.233 -7.465 -8.314 4.626 14 A_U1200:U1211_A A 1200 ? A 1211 ? 16 1 1 A G 51 1_555 A C 60 1_555 -0.537 -0.527 -0.441 -7.263 0.305 2.536 15 A_G1201:C1210_A A 1201 ? A 1210 ? 19 1 1 A C 52 1_555 A G 59 1_555 0.385 -0.341 -0.342 2.359 0.722 0.988 16 A_C1202:G1209_A A 1202 ? A 1209 ? 19 1 1 A G 53 1_555 A A 58 1_555 6.590 -4.163 -0.475 -3.112 2.927 -10.454 17 A_G1203:A1208_A A 1203 ? A 1208 ? 11 10 1 A A 46 1_555 A U 42 1_555 0.149 1.506 -0.775 10.189 -4.882 178.499 18 A_A1196:U1192_A A 1196 ? A 1192 ? 21 2 1 A A 17 1_555 A U 41 1_555 -0.085 -0.020 -0.086 0.002 -13.624 8.380 19 A_A1167:U1191_A A 1167 ? A 1191 ? 20 1 1 A G 18 1_555 A C 40 1_555 -0.273 -0.067 -0.230 -17.826 -4.717 2.421 20 A_G1168:C1190_A A 1168 ? A 1190 ? 19 1 1 A G 19 1_555 A C 39 1_555 -0.538 -0.125 0.241 -6.288 1.061 -3.456 21 A_G1169:C1189_A A 1169 ? A 1189 ? 19 1 1 A U 20 1_555 A A 48 1_555 -0.443 3.365 0.083 -4.463 -3.561 -70.159 22 A_U1170:A1198_A A 1170 ? A 1198 ? 23 3 1 A G 22 1_555 A C 36 1_555 -0.510 -0.395 0.010 3.055 -4.132 -4.552 23 A_G1172:C1186_A A 1172 ? A 1186 ? 19 1 1 A G 23 1_555 A C 35 1_555 0.023 -0.589 -0.166 -3.660 -12.111 1.302 24 A_G1173:C1185_A A 1173 ? A 1185 ? 19 1 1 A C 24 1_555 A G 34 1_555 0.476 -0.393 0.091 -5.912 -14.634 3.345 25 A_C1174:G1184_A A 1174 ? A 1184 ? 19 1 1 A U 25 1_555 A A 33 1_555 5.621 -1.265 0.210 -14.723 -9.965 6.787 26 A_U1175:A1183_A A 1175 ? A 1183 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 74 1_555 A C 2 1_555 A G 73 1_555 -0.032 -1.392 2.977 1.676 4.120 39.432 -2.478 0.221 2.820 6.082 -2.474 39.672 1 AA_G1151C1152:G1223C1224_AA A 1151 ? A 1224 ? A 1152 ? A 1223 ? 1 A C 2 1_555 A G 73 1_555 A C 3 1_555 A G 72 1_555 0.280 -2.075 3.286 -0.921 6.148 30.847 -4.912 -0.679 2.821 11.413 1.709 31.452 2 AA_C1152C1153:G1222G1223_AA A 1152 ? A 1223 ? A 1153 ? A 1222 ? 1 A G 7 1_555 A A 71 1_555 A A 8 1_555 A G 70 1_555 -1.319 -1.267 4.387 -8.838 -3.080 -5.741 11.691 -21.441 0.880 19.265 -55.284 -10.976 3 AA_G1157A1158:G1220A1221_AA A 1157 ? A 1221 ? A 1158 ? A 1220 ? 1 A A 8 1_555 A G 70 1_555 A A 10 1_555 A C 69 1_555 -1.035 -0.244 4.384 -9.079 15.349 58.472 -1.244 0.428 4.310 15.328 9.067 60.900 4 AA_A1158A1160:C1219G1220_AA A 1158 ? A 1220 ? A 1160 ? A 1219 ? 1 A A 10 1_555 A C 69 1_555 A G 11 1_555 A U 68 1_555 -0.970 -1.380 3.292 -0.106 11.969 37.055 -3.449 1.445 2.736 18.258 0.161 38.876 5 AA_A1160G1161:U1218C1219_AA A 1160 ? A 1219 ? A 1161 ? A 1218 ? 1 A G 11 1_555 A U 68 1_555 A C 12 1_555 A G 67 1_555 0.003 -1.177 2.942 -1.036 3.280 44.505 -1.817 -0.088 2.852 4.323 1.365 44.631 6 AA_G1161C1162:G1217U1218_AA A 1161 ? A 1218 ? A 1162 ? A 1217 ? 1 A C 12 1_555 A G 67 1_555 A G 13 1_555 A C 66 1_555 -0.340 -1.889 3.366 -0.540 6.012 31.006 -4.561 0.528 2.962 11.115 0.998 31.574 7 AA_C1162G1163:C1216G1217_AA A 1162 ? A 1217 ? A 1163 ? A 1216 ? 1 A G 13 1_555 A C 66 1_555 A G 14 1_555 A C 65 1_555 -0.075 -1.988 3.183 -1.236 8.884 27.998 -5.607 -0.086 2.451 17.793 2.476 29.372 8 AA_G1163G1164:C1215C1216_AA A 1163 ? A 1216 ? A 1164 ? A 1215 ? 1 A G 14 1_555 A C 65 1_555 A G 15 1_555 A C 64 1_555 0.439 -1.844 3.232 0.014 7.371 35.887 -3.881 -0.698 2.811 11.810 -0.022 36.612 9 AA_G1164G1165:C1214C1215_AA A 1164 ? A 1215 ? A 1165 ? A 1214 ? 1 A G 15 1_555 A C 64 1_555 A G 16 1_555 A A 63 1_555 -0.461 -0.886 3.757 7.405 12.901 68.457 -1.292 0.700 3.504 11.332 -6.505 69.861 10 AA_G1165G1166:A1213C1214_AA A 1165 ? A 1214 ? A 1166 ? A 1213 ? 1 A G 16 1_555 A A 63 1_555 A G 47 1_555 A C 62 1_555 -3.194 0.805 3.131 7.303 2.369 35.171 1.010 6.075 2.487 3.864 -11.910 35.974 11 AA_G1166G1197:C1212A1213_AA A 1166 ? A 1213 ? A 1197 ? A 1212 ? 1 A G 47 1_555 A C 62 1_555 A U 50 1_555 A U 61 1_555 -1.467 -3.394 3.403 2.228 -0.856 38.132 -5.073 2.534 3.388 -1.309 -3.406 38.203 12 AA_G1197U1200:U1211C1212_AA A 1197 ? A 1212 ? A 1200 ? A 1211 ? 1 A U 50 1_555 A U 61 1_555 A G 51 1_555 A C 60 1_555 -0.442 -1.859 3.304 1.418 5.093 34.221 -3.883 0.954 2.984 8.591 -2.392 34.615 13 AA_U1200G1201:C1210U1211_AA A 1200 ? A 1211 ? A 1201 ? A 1210 ? 1 A G 51 1_555 A C 60 1_555 A C 52 1_555 A G 59 1_555 0.003 -2.202 3.080 -0.305 -0.028 32.704 -3.907 -0.056 3.082 -0.051 0.542 32.706 14 AA_G1201C1202:G1209C1210_AA A 1201 ? A 1210 ? A 1202 ? A 1209 ? 1 A C 52 1_555 A G 59 1_555 A G 53 1_555 A A 58 1_555 -0.105 -1.482 3.507 3.891 3.521 56.234 -1.776 0.342 3.403 3.726 -4.118 56.459 15 AA_C1202G1203:A1208G1209_AA A 1202 ? A 1209 ? A 1203 ? A 1208 ? 1 A A 46 1_555 A U 42 1_555 A A 17 1_555 A U 41 1_555 -2.960 -2.095 2.365 75.570 -147.394 171.250 -0.967 1.521 2.397 -73.716 -37.794 178.907 16 AA_A1196A1167:U1191U1192_AA A 1196 ? A 1192 ? A 1167 ? A 1191 ? 1 A A 17 1_555 A U 41 1_555 A G 18 1_555 A C 40 1_555 -0.581 -1.920 3.533 -0.791 9.854 35.358 -4.409 0.815 2.923 15.845 1.272 36.671 17 AA_A1167G1168:C1190U1191_AA A 1167 ? A 1191 ? A 1168 ? A 1190 ? 1 A G 18 1_555 A C 40 1_555 A G 19 1_555 A C 39 1_555 -0.589 -1.807 3.022 -0.982 3.514 29.027 -4.259 0.977 2.806 6.975 1.949 29.250 18 AA_G1168G1169:C1189C1190_AA A 1168 ? A 1190 ? A 1169 ? A 1189 ? 1 A G 19 1_555 A C 39 1_555 A U 20 1_555 A A 48 1_555 -3.250 0.112 -1.779 27.159 170.540 156.659 0.237 1.596 -1.823 85.344 -13.591 178.522 19 AA_G1169U1170:A1198C1189_AA A 1169 ? A 1189 ? A 1170 ? A 1198 ? 1 A G 22 1_555 A C 36 1_555 A G 23 1_555 A C 35 1_555 -0.339 -1.752 3.403 -2.513 6.663 38.930 -3.371 0.206 3.088 9.897 3.732 39.551 20 AA_G1172G1173:C1185C1186_AA A 1172 ? A 1186 ? A 1173 ? A 1185 ? 1 A G 23 1_555 A C 35 1_555 A C 24 1_555 A G 34 1_555 0.772 -1.734 3.273 2.017 0.819 32.911 -3.193 -1.017 3.270 1.443 -3.555 32.981 21 AA_G1173C1174:G1184C1185_AA A 1173 ? A 1185 ? A 1174 ? A 1184 ? 1 A C 24 1_555 A G 34 1_555 A U 25 1_555 A A 33 1_555 0.352 -1.039 3.533 6.596 7.175 51.469 -1.684 0.065 3.388 8.178 -7.519 52.321 22 AA_C1174U1175:A1183G1184_AA A 1174 ? A 1184 ? A 1175 ? A 1183 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 8 water HOH #