HEADER HYDROLASE 18-AUG-15 5D9D TITLE LUCIFERIN-REGENERATING ENZYME SOLVED BY SAD USING SYNCHROTRON TITLE 2 RADIATION AT ROOM TEMPERATURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LUCIFERIN REGENERATING ENZYME; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHOTINUS PYRALIS; SOURCE 3 ORGANISM_COMMON: COMMON EASTERN FIREFLY; SOURCE 4 ORGANISM_TAXID: 7054; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS BETA-PROOELLER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.YAMASHITA,D.PAN,T.OKUDA,T.MURAI,A.KODAN,T.YAMAGUCHI,K.GOMI, AUTHOR 2 N.KAJIYAMA,H.KATO,H.AGO,M.YAMAMOTO,T.NAKATSU REVDAT 3 20-MAR-24 5D9D 1 LINK REVDAT 2 19-FEB-20 5D9D 1 REMARK REVDAT 1 23-SEP-15 5D9D 0 JRNL AUTH K.YAMASHITA,D.PAN,T.OKUDA,M.SUGAHARA,A.KODAN,T.YAMAGUCHI, JRNL AUTH 2 T.MURAI,K.GOMI,N.KAJIYAMA,E.MIZOHATA,M.SUZUKI,E.NANGO, JRNL AUTH 3 K.TONO,Y.JOTI,T.KAMESHIMA,J.PARK,C.SONG,T.HATSUI,M.YABASHI, JRNL AUTH 4 S.IWATA,H.KATO,H.AGO,M.YAMAMOTO,T.NAKATSU JRNL TITL AN ISOMORPHOUS REPLACEMENT METHOD FOR EFFICIENT DE NOVO JRNL TITL 2 PHASING FOR SERIAL FEMTOSECOND CRYSTALLOGRAPHY. JRNL REF SCI REP V. 5 14017 2015 JRNL REFN ESSN 2045-2322 JRNL PMID 26360462 JRNL DOI 10.1038/SREP14017 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1690 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 67029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.8694 - 4.5361 1.00 3389 140 0.1469 0.1735 REMARK 3 2 4.5361 - 3.6010 1.00 3400 143 0.1212 0.1458 REMARK 3 3 3.6010 - 3.1460 1.00 3385 135 0.1277 0.1715 REMARK 3 4 3.1460 - 2.8584 1.00 3379 148 0.1415 0.1747 REMARK 3 5 2.8584 - 2.6536 1.00 3390 131 0.1421 0.1649 REMARK 3 6 2.6536 - 2.4972 1.00 3391 143 0.1456 0.2036 REMARK 3 7 2.4972 - 2.3721 1.00 3384 146 0.1434 0.1927 REMARK 3 8 2.3721 - 2.2689 1.00 3386 135 0.1366 0.1597 REMARK 3 9 2.2689 - 2.1815 1.00 3392 147 0.1302 0.1607 REMARK 3 10 2.1815 - 2.1063 1.00 3422 133 0.1366 0.1738 REMARK 3 11 2.1063 - 2.0404 1.00 3409 138 0.1333 0.1644 REMARK 3 12 2.0404 - 1.9821 1.00 3350 142 0.1421 0.1622 REMARK 3 13 1.9821 - 1.9299 1.00 3379 150 0.1504 0.1787 REMARK 3 14 1.9299 - 1.8828 1.00 3390 132 0.1600 0.2304 REMARK 3 15 1.8828 - 1.8400 1.00 3380 148 0.1789 0.1962 REMARK 3 16 1.8400 - 1.8009 1.00 3423 139 0.1906 0.2490 REMARK 3 17 1.8009 - 1.7648 1.00 3393 138 0.1974 0.2492 REMARK 3 18 1.7648 - 1.7315 1.00 3396 130 0.2157 0.2205 REMARK 3 19 1.7315 - 1.7006 0.98 3327 146 0.2209 0.2325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 2528 REMARK 3 ANGLE : 1.778 3449 REMARK 3 CHIRALITY : 0.119 389 REMARK 3 PLANARITY : 0.011 443 REMARK 3 DIHEDRAL : 13.730 931 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 34.3234 14.3531 17.1553 REMARK 3 T TENSOR REMARK 3 T11: 0.0775 T22: 0.0954 REMARK 3 T33: 0.0926 T12: 0.0059 REMARK 3 T13: -0.0038 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.3147 L22: 0.7441 REMARK 3 L33: 0.7617 L12: -0.0758 REMARK 3 L13: 0.0496 L23: -0.1633 REMARK 3 S TENSOR REMARK 3 S11: -0.0406 S12: -0.0332 S13: -0.0331 REMARK 3 S21: 0.0474 S22: 0.0191 S23: -0.0064 REMARK 3 S31: -0.0236 S32: 0.0343 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212836. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9839 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67034 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.62500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30.6% PEG 3350, 10% MPD, 0.1M MOPS PH REMARK 280 7.0, 0.2M MGCL2, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.05350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.45800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.58850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.45800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.05350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.58850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 42 O HOH A 501 2.06 REMARK 500 ND2 ASN A 221 O HOH A 502 2.16 REMARK 500 OE2 GLU A 183 O HOH A 503 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 52 CB CYS A 52 SG -0.140 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 59 -10.27 -141.30 REMARK 500 GLU A 76 -101.14 60.21 REMARK 500 VAL A 87 -35.87 -145.28 REMARK 500 ASN A 110 -121.76 -126.35 REMARK 500 ALA A 145 -161.22 67.88 REMARK 500 LYS A 147 36.74 36.33 REMARK 500 ASN A 160 -139.59 -134.14 REMARK 500 ASP A 212 -100.86 -129.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE1 REMARK 620 2 ASN A 160 OD1 171.5 REMARK 620 3 ASP A 212 OD1 97.1 85.1 REMARK 620 4 HOH A 523 O 81.4 90.4 92.6 REMARK 620 5 HOH A 534 O 89.0 99.0 94.1 168.9 REMARK 620 6 HOH A 599 O 88.0 89.5 174.4 85.8 88.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 404 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 90 O REMARK 620 2 PRO A 91 N 53.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5D9B RELATED DB: PDB REMARK 900 RELATED ID: 5D9C RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE DEPOSITORS BELIEVE THAT RESIDUES ILE 133, TYR 268, PHE 281 ARE REMARK 999 CORRECT AND THAT UNIPROT IS INCORRECT AT THESE POSITIONS DBREF 5D9D A 1 308 UNP Q95YI4 Q95YI4_PHOPY 1 308 SEQADV 5D9D GLY A -2 UNP Q95YI4 EXPRESSION TAG SEQADV 5D9D SER A -1 UNP Q95YI4 EXPRESSION TAG SEQADV 5D9D HIS A 0 UNP Q95YI4 EXPRESSION TAG SEQADV 5D9D ILE A 133 UNP Q95YI4 VAL 133 SEE SEQUENCE DETAILS SEQADV 5D9D TYR A 268 UNP Q95YI4 HIS 268 SEE SEQUENCE DETAILS SEQADV 5D9D PHE A 281 UNP Q95YI4 LEU 281 SEE SEQUENCE DETAILS SEQRES 1 A 311 GLY SER HIS MET GLY PRO VAL VAL GLU LYS ILE ALA GLU SEQRES 2 A 311 LEU GLY LYS TYR THR VAL GLY GLU GLY PRO HIS TRP ASP SEQRES 3 A 311 HIS GLU THR GLN THR LEU TYR PHE VAL ASP THR VAL GLU SEQRES 4 A 311 LYS THR PHE HIS LYS TYR VAL PRO SER GLN LYS LYS TYR SEQRES 5 A 311 THR PHE CYS LYS VAL ASP LYS LEU VAL SER PHE ILE ILE SEQRES 6 A 311 PRO LEU ALA GLY SER PRO GLY ARG PHE VAL VAL SER LEU SEQRES 7 A 311 GLU ARG GLU ILE ALA ILE LEU THR TRP ASP GLY VAL SER SEQRES 8 A 311 ALA ALA PRO THR SER ILE GLU ALA ILE VAL ASN VAL GLU SEQRES 9 A 311 PRO HIS ILE LYS ASN ASN ARG LEU ASN ASP GLY LYS ALA SEQRES 10 A 311 ASP PRO LEU GLY ASN LEU TRP THR GLY THR MET ALA ILE SEQRES 11 A 311 ASP ALA GLY LEU PRO ILE GLY PRO VAL THR GLY SER LEU SEQRES 12 A 311 TYR HIS LEU GLY ALA ASP LYS LYS VAL LYS MET HIS GLU SEQRES 13 A 311 SER ASN ILE ALA ILE ALA ASN GLY LEU ALA TRP SER ASN SEQRES 14 A 311 ASP LEU LYS LYS MET TYR TYR ILE ASP SER GLY LYS ARG SEQRES 15 A 311 ARG VAL ASP GLU TYR ASP TYR ASP ALA SER THR LEU SER SEQRES 16 A 311 ILE SER ASN GLN ARG PRO LEU PHE THR PHE GLU LYS HIS SEQRES 17 A 311 GLU VAL PRO GLY TYR PRO ASP GLY GLN THR ILE ASP GLU SEQRES 18 A 311 GLU GLY ASN LEU TRP VAL ALA VAL PHE GLN GLY GLN ARG SEQRES 19 A 311 ILE ILE LYS ILE SER THR GLN GLN PRO GLU VAL LEU LEU SEQRES 20 A 311 ASP THR VAL LYS ILE PRO ASP PRO GLN VAL THR SER VAL SEQRES 21 A 311 ALA PHE GLY GLY PRO ASN LEU ASP GLU LEU TYR VAL THR SEQRES 22 A 311 SER ALA GLY LEU GLN LEU ASP ASP SER SER PHE ASP LYS SEQRES 23 A 311 SER LEU VAL ASN GLY HIS VAL TYR ARG VAL THR GLY LEU SEQRES 24 A 311 GLY VAL LYS GLY PHE ALA GLY VAL LYS VAL LYS LEU HET MG A 401 1 HET HG A 402 1 HET HG A 403 1 HET HG A 404 1 HET MPD A 405 8 HETNAM MG MAGNESIUM ION HETNAM HG MERCURY (II) ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 2 MG MG 2+ FORMUL 3 HG 3(HG 2+) FORMUL 6 MPD C6 H14 O2 FORMUL 7 HOH *158(H2 O) HELIX 1 AA1 ALA A 9 GLY A 12 5 4 HELIX 2 AA2 GLU A 203 GLU A 206 5 4 HELIX 3 AA3 ASP A 282 VAL A 286 5 5 SHEET 1 AA1 4 VAL A 4 LYS A 7 0 SHEET 2 AA1 4 TYR A 291 THR A 294 -1 O ARG A 292 N GLU A 6 SHEET 3 AA1 4 GLU A 266 SER A 271 -1 N LEU A 267 O VAL A 293 SHEET 4 AA1 4 VAL A 254 GLY A 260 -1 N GLY A 260 O GLU A 266 SHEET 1 AA2 4 GLY A 17 ASP A 23 0 SHEET 2 AA2 4 THR A 28 ASP A 33 -1 O TYR A 30 N HIS A 21 SHEET 3 AA2 4 THR A 38 VAL A 43 -1 O TYR A 42 N LEU A 29 SHEET 4 AA2 4 LYS A 48 LYS A 53 -1 O LYS A 48 N VAL A 43 SHEET 1 AA3 4 ILE A 61 PRO A 63 0 SHEET 2 AA3 4 ARG A 70 LEU A 75 -1 O VAL A 72 N ILE A 62 SHEET 3 AA3 4 GLU A 78 THR A 83 -1 O LEU A 82 N PHE A 71 SHEET 4 AA3 4 SER A 93 ASN A 99 -1 O ILE A 97 N ILE A 79 SHEET 1 AA4 4 ASN A 107 ALA A 114 0 SHEET 2 AA4 4 LEU A 120 ALA A 126 -1 O GLY A 123 N ASN A 110 SHEET 3 AA4 4 GLY A 138 LEU A 143 -1 O TYR A 141 N THR A 122 SHEET 4 AA4 4 VAL A 149 ILE A 156 -1 O HIS A 152 N LEU A 140 SHEET 1 AA5 4 ALA A 159 TRP A 164 0 SHEET 2 AA5 4 LYS A 170 ASP A 175 -1 O TYR A 172 N ALA A 163 SHEET 3 AA5 4 ARG A 180 ASP A 187 -1 O ASP A 182 N TYR A 173 SHEET 4 AA5 4 SER A 192 THR A 201 -1 O LEU A 199 N VAL A 181 SHEET 1 AA6 4 TYR A 210 ILE A 216 0 SHEET 2 AA6 4 LEU A 222 PHE A 227 -1 O TRP A 223 N THR A 215 SHEET 3 AA6 4 ARG A 231 ILE A 235 -1 O ILE A 233 N VAL A 224 SHEET 4 AA6 4 LEU A 243 LYS A 248 -1 O ASP A 245 N LYS A 234 LINK OE1 GLU A 18 MG MG A 401 1555 1555 1.99 LINK SG CYS A 52 HG HG A 403 1555 1555 3.24 LINK O ALA A 90 HG HG A 404 1555 1555 2.62 LINK N PRO A 91 HG HG A 404 1555 1555 2.35 LINK OD1 ASN A 160 MG MG A 401 1555 1555 2.07 LINK OD1 ASP A 212 MG MG A 401 1555 1555 2.02 LINK MG MG A 401 O HOH A 523 1555 1555 2.15 LINK MG MG A 401 O HOH A 534 1555 1555 1.97 LINK MG MG A 401 O HOH A 599 1555 1555 2.18 LINK HG A HG A 402 O AHOH A 657 1555 1555 2.33 CISPEP 1 LEU A 131 PRO A 132 0 -2.87 CISPEP 2 ALA A 145 ASP A 146 0 19.36 SITE 1 AC1 6 GLU A 18 ASN A 160 ASP A 212 HOH A 523 SITE 2 AC1 6 HOH A 534 HOH A 599 SITE 1 AC2 7 PHE A 39 CYS A 52 LEU A 82 TRP A 84 SITE 2 AC2 7 HG A 403 HG A 404 HOH A 657 SITE 1 AC3 4 PHE A 39 CYS A 52 TRP A 84 HG A 402 SITE 1 AC4 7 CYS A 52 TRP A 84 SER A 88 ALA A 89 SITE 2 AC4 7 ALA A 90 PRO A 91 HG A 402 SITE 1 AC5 6 LEU A 131 ASN A 160 ASP A 212 HOH A 523 SITE 2 AC5 6 HOH A 528 HOH A 562 CRYST1 48.107 77.177 84.916 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020787 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011776 0.00000