HEADER TRANSFERASE 23-AUG-15 5DCC TITLE X-RAY CRYSTAL STRUCTURE OF A TEBIPENEM ADDUCT OF L,D TRANSPEPTIDASE 2 TITLE 2 FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: L,D-TRANSPEPTIDASE 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 56-408; COMPND 5 SYNONYM: LDT 2,LDT(MT2); COMPND 6 EC: 2.3.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83331; SOURCE 4 STRAIN: CDC 1551 / OSHKOSH; SOURCE 5 GENE: LDTB, MT2594, V735_02606; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS L, D -TRANSPEPTIDASE, CARBAPENEMS TEBIPENEM-ADDUCT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.PAN,L.BASTA,G.LAMICHHANE,M.A.BIANCHET REVDAT 4 27-SEP-23 5DCC 1 REMARK REVDAT 3 11-DEC-19 5DCC 1 REMARK REVDAT 2 23-AUG-17 5DCC 1 JRNL REMARK REVDAT 1 28-SEP-16 5DCC 0 JRNL AUTH M.A.BIANCHET,Y.H.PAN,L.A.B.BASTA,H.SAAVEDRA,E.P.LLOYD, JRNL AUTH 2 P.KUMAR,R.MATTOO,C.A.TOWNSEND,G.LAMICHHANE JRNL TITL STRUCTURAL INSIGHT INTO THE INACTIVATION OF MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS NON-CLASSICAL TRANSPEPTIDASE LDTMT2 BY BIAPENEM JRNL TITL 3 AND TEBIPENEM. JRNL REF BMC BIOCHEM. V. 18 8 2017 JRNL REFN ESSN 1471-2091 JRNL PMID 28545389 JRNL DOI 10.1186/S12858-017-0082-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.B.ERDEMLI,R.GUPTA,W.R.BISHAI,G.LAMICHHANE,L.M.AMZEL, REMARK 1 AUTH 2 M.A.BIANCHET REMARK 1 TITL TARGETING THE CELL WALL OF MYCOBACTERIUM TUBERCULOSIS: REMARK 1 TITL 2 STRUCTURE AND MECHANISM OF L,D-TRANSPEPTIDASE 2. REMARK 1 REF STRUCTURE V. 20 2103 2012 REMARK 1 REFN ISSN 1878-4186 REMARK 1 PMID 23103390 REMARK 1 DOI 10.1016/J.STR.2012.09.016 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 61039 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 6107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1720 - 7.6027 0.99 1828 206 0.1533 0.1746 REMARK 3 2 7.6027 - 6.0397 1.00 1838 231 0.1552 0.1856 REMARK 3 3 6.0397 - 5.2778 1.00 1841 202 0.1396 0.1675 REMARK 3 4 5.2778 - 4.7959 1.00 1851 220 0.1334 0.1633 REMARK 3 5 4.7959 - 4.4526 1.00 1810 214 0.1181 0.1852 REMARK 3 6 4.4526 - 4.1903 1.00 1867 205 0.1296 0.1631 REMARK 3 7 4.1903 - 3.9806 1.00 1826 214 0.1457 0.1936 REMARK 3 8 3.9806 - 3.8074 1.00 1821 225 0.1565 0.2186 REMARK 3 9 3.8074 - 3.6609 1.00 1849 201 0.1572 0.2119 REMARK 3 10 3.6609 - 3.5346 1.00 1888 180 0.1672 0.1818 REMARK 3 11 3.5346 - 3.4242 1.00 1801 215 0.1622 0.1854 REMARK 3 12 3.4242 - 3.3263 1.00 1831 251 0.1708 0.2293 REMARK 3 13 3.3263 - 3.2388 1.00 1853 179 0.1755 0.2152 REMARK 3 14 3.2388 - 3.1598 1.00 1882 210 0.1781 0.2057 REMARK 3 15 3.1598 - 3.0880 0.99 1825 211 0.1865 0.2573 REMARK 3 16 3.0880 - 3.0223 1.00 1823 186 0.1868 0.2244 REMARK 3 17 3.0223 - 2.9618 1.00 1868 184 0.1975 0.2359 REMARK 3 18 2.9618 - 2.9060 0.99 1849 175 0.1950 0.2425 REMARK 3 19 2.9060 - 2.8541 1.00 1832 214 0.1985 0.2701 REMARK 3 20 2.8541 - 2.8057 1.00 1853 191 0.2230 0.2841 REMARK 3 21 2.8057 - 2.7605 0.99 1880 181 0.2039 0.2411 REMARK 3 22 2.7605 - 2.7180 0.99 1834 210 0.1976 0.2730 REMARK 3 23 2.7180 - 2.6780 0.99 1785 208 0.2104 0.2712 REMARK 3 24 2.6780 - 2.6403 0.99 1884 164 0.2026 0.2747 REMARK 3 25 2.6403 - 2.6046 0.99 1820 205 0.2058 0.2648 REMARK 3 26 2.6046 - 2.5708 0.99 1830 216 0.1918 0.2575 REMARK 3 27 2.5708 - 2.5387 0.99 1804 214 0.2049 0.2824 REMARK 3 28 2.5387 - 2.5081 0.98 1801 209 0.2029 0.2672 REMARK 3 29 2.5081 - 2.4789 0.97 1807 201 0.2136 0.3307 REMARK 3 30 2.4789 - 2.4511 0.89 1651 185 0.2082 0.2743 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5735 REMARK 3 ANGLE : 0.725 7801 REMARK 3 CHIRALITY : 0.028 853 REMARK 3 PLANARITY : 0.003 1012 REMARK 3 DIHEDRAL : 13.197 2021 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7871 1.2743 108.2742 REMARK 3 T TENSOR REMARK 3 T11: 0.1376 T22: 0.1327 REMARK 3 T33: 0.1910 T12: -0.0185 REMARK 3 T13: 0.0288 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 0.6333 L22: 2.2855 REMARK 3 L33: 2.2391 L12: 0.1043 REMARK 3 L13: 0.6445 L23: 1.1250 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: -0.0505 S13: -0.0480 REMARK 3 S21: 0.1368 S22: 0.0417 S23: 0.0623 REMARK 3 S31: 0.0346 S32: 0.0444 S33: -0.0344 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 407 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9007 -13.2445 65.7103 REMARK 3 T TENSOR REMARK 3 T11: 0.2129 T22: 0.2215 REMARK 3 T33: 0.2511 T12: -0.0630 REMARK 3 T13: -0.0102 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.3979 L22: 0.5456 REMARK 3 L33: 1.5111 L12: -0.4531 REMARK 3 L13: 0.0224 L23: -0.1754 REMARK 3 S TENSOR REMARK 3 S11: 0.0903 S12: -0.0232 S13: -0.0669 REMARK 3 S21: -0.0355 S22: -0.0534 S23: 0.0725 REMARK 3 S31: 0.0155 S32: -0.0207 S33: -0.0371 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 56 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1534 -22.3673 58.6599 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.1665 REMARK 3 T33: 0.1742 T12: -0.0334 REMARK 3 T13: -0.0206 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 0.3038 L22: 0.5887 REMARK 3 L33: 2.5586 L12: 0.0873 REMARK 3 L13: -0.6707 L23: -0.6287 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: -0.0891 S13: 0.0345 REMARK 3 S21: 0.0296 S22: 0.0582 S23: 0.0332 REMARK 3 S31: 0.0459 S32: -0.0227 S33: -0.0702 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 249 THROUGH 408 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3501 -11.0228 21.0169 REMARK 3 T TENSOR REMARK 3 T11: 0.1969 T22: 0.1806 REMARK 3 T33: 0.1868 T12: 0.0339 REMARK 3 T13: 0.0152 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 2.2024 L22: 1.2859 REMARK 3 L33: 1.2991 L12: -0.2699 REMARK 3 L13: 0.3861 L23: 0.2735 REMARK 3 S TENSOR REMARK 3 S11: 0.1143 S12: 0.3739 S13: 0.0887 REMARK 3 S21: -0.1278 S22: -0.1948 S23: 0.0630 REMARK 3 S31: -0.1164 S32: -0.0487 S33: 0.0929 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212999. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5146 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 43.165 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 18.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5DC2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MONOMETHYLESTER 5500 18 % W/V 0.2 REMARK 280 M AMSULPHATE 25 MM TRIS HCL, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.20000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 408 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 316 O HOH B 601 1.82 REMARK 500 O HOH B 728 O HOH B 768 1.85 REMARK 500 O HOH A 754 O HOH A 764 1.94 REMARK 500 O HOH A 654 O HOH A 734 1.95 REMARK 500 ND1 HIS A 300 O HOH A 601 1.97 REMARK 500 O HOH B 645 O HOH B 745 1.98 REMARK 500 O GLN A 400 O HOH A 602 2.04 REMARK 500 O HOH A 733 O HOH A 795 2.05 REMARK 500 O HOH A 697 O HOH A 706 2.06 REMARK 500 O LEU A 105 O HOH A 603 2.08 REMARK 500 O HOH B 678 O HOH B 763 2.11 REMARK 500 O13 58U A 501 O HOH A 604 2.16 REMARK 500 O HOH A 689 O HOH A 772 2.16 REMARK 500 O4 SO4 A 505 O HOH A 605 2.17 REMARK 500 O GLY B 281 O HOH B 602 2.17 REMARK 500 O4 PGE A 513 O HOH A 606 2.17 REMARK 500 OE2 GLU B 213 O HOH B 603 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 744 O HOH A 748 1556 2.08 REMARK 500 ND1 HIS A 150 OD2 ASP B 321 1656 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 280 -157.76 -94.05 REMARK 500 HIS A 347 -51.28 -129.65 REMARK 500 THR A 350 -3.32 -140.77 REMARK 500 ASN A 405 41.60 -151.24 REMARK 500 MET B 280 -169.93 -100.57 REMARK 500 HIS B 347 -58.27 -134.61 REMARK 500 ASN B 405 47.23 -150.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 800 DISTANCE = 5.89 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 507 REMARK 610 PEG A 508 REMARK 610 EDO A 516 REMARK 610 PEG B 506 REMARK 610 PEG B 507 REMARK 610 PEG B 508 REMARK 610 PEG B 509 REMARK 610 EDO B 517 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 58U A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 517 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 58U B 501 and CYS B REMARK 800 354 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DH7 RELATED DB: PDB REMARK 900 BIAPENEM-ADDUCT OF (3,3) L,D-TRANSPEPTIDASE 2 REMARK 900 RELATED ID: 3TUR RELATED DB: PDB REMARK 900 APO(3,3)-L,D-TRANSPEPTIDASE 2 OF MYCOBACTERIIUM TUBERCULOSIS IN REMARK 900 COMPLEX ITH PETIDOGLYCAN FRAGMENT REMARK 900 RELATED ID: 5DC2 RELATED DB: PDB DBREF 5DCC A 56 408 UNP O53223 LDT2_MYCTO 56 408 DBREF 5DCC B 56 408 UNP O53223 LDT2_MYCTO 56 408 SEQRES 1 A 353 ASP LEU LEU VAL PRO LYS LEU THR ALA SER VAL THR ASP SEQRES 2 A 353 GLY ALA VAL GLY VAL THR VAL ASP ALA PRO VAL SER VAL SEQRES 3 A 353 THR ALA ALA ASP GLY VAL LEU ALA ALA VAL THR MET VAL SEQRES 4 A 353 ASN ASP ASN GLY ARG PRO VAL ALA GLY ARG LEU SER PRO SEQRES 5 A 353 ASP GLY LEU ARG TRP SER THR THR GLU GLN LEU GLY TYR SEQRES 6 A 353 ASN ARG ARG TYR THR LEU ASN ALA THR ALA LEU GLY LEU SEQRES 7 A 353 GLY GLY ALA ALA THR ARG GLN LEU THR PHE GLN THR SER SEQRES 8 A 353 SER PRO ALA HIS LEU THR MET PRO TYR VAL MET PRO GLY SEQRES 9 A 353 ASP GLY GLU VAL VAL GLY VAL GLY GLU PRO VAL ALA ILE SEQRES 10 A 353 ARG PHE ASP GLU ASN ILE ALA ASP ARG GLY ALA ALA GLU SEQRES 11 A 353 LYS ALA ILE LYS ILE THR THR ASN PRO PRO VAL GLU GLY SEQRES 12 A 353 ALA PHE TYR TRP LEU ASN ASN ARG GLU VAL ARG TRP ARG SEQRES 13 A 353 PRO GLU HIS PHE TRP LYS PRO GLY THR ALA VAL ASP VAL SEQRES 14 A 353 ALA VAL ASN THR TYR GLY VAL ASP LEU GLY GLU GLY MET SEQRES 15 A 353 PHE GLY GLU ASP ASN VAL GLN THR HIS PHE THR ILE GLY SEQRES 16 A 353 ASP GLU VAL ILE ALA THR ALA ASP ASP ASN THR LYS ILE SEQRES 17 A 353 LEU THR VAL ARG VAL ASN GLY GLU VAL VAL LYS SER MET SEQRES 18 A 353 PRO THR SER MET GLY LYS ASP SER THR PRO THR ALA ASN SEQRES 19 A 353 GLY ILE TYR ILE VAL GLY SER ARG TYR LYS HIS ILE ILE SEQRES 20 A 353 MET ASP SER SER THR TYR GLY VAL PRO VAL ASN SER PRO SEQRES 21 A 353 ASN GLY TYR ARG THR ASP VAL ASP TRP ALA THR GLN ILE SEQRES 22 A 353 SER TYR SER GLY VAL PHE VAL HIS SER ALA PRO TRP SER SEQRES 23 A 353 VAL GLY ALA GLN GLY HIS THR ASN THR SER HIS GLY CYS SEQRES 24 A 353 LEU ASN VAL SER PRO SER ASN ALA GLN TRP PHE TYR ASP SEQRES 25 A 353 HIS VAL LYS ARG GLY ASP ILE VAL GLU VAL VAL ASN THR SEQRES 26 A 353 VAL GLY GLY THR LEU PRO GLY ILE ASP GLY LEU GLY ASP SEQRES 27 A 353 TRP ASN ILE PRO TRP ASP GLN TRP ARG ALA GLY ASN ALA SEQRES 28 A 353 LYS ALA SEQRES 1 B 353 ASP LEU LEU VAL PRO LYS LEU THR ALA SER VAL THR ASP SEQRES 2 B 353 GLY ALA VAL GLY VAL THR VAL ASP ALA PRO VAL SER VAL SEQRES 3 B 353 THR ALA ALA ASP GLY VAL LEU ALA ALA VAL THR MET VAL SEQRES 4 B 353 ASN ASP ASN GLY ARG PRO VAL ALA GLY ARG LEU SER PRO SEQRES 5 B 353 ASP GLY LEU ARG TRP SER THR THR GLU GLN LEU GLY TYR SEQRES 6 B 353 ASN ARG ARG TYR THR LEU ASN ALA THR ALA LEU GLY LEU SEQRES 7 B 353 GLY GLY ALA ALA THR ARG GLN LEU THR PHE GLN THR SER SEQRES 8 B 353 SER PRO ALA HIS LEU THR MET PRO TYR VAL MET PRO GLY SEQRES 9 B 353 ASP GLY GLU VAL VAL GLY VAL GLY GLU PRO VAL ALA ILE SEQRES 10 B 353 ARG PHE ASP GLU ASN ILE ALA ASP ARG GLY ALA ALA GLU SEQRES 11 B 353 LYS ALA ILE LYS ILE THR THR ASN PRO PRO VAL GLU GLY SEQRES 12 B 353 ALA PHE TYR TRP LEU ASN ASN ARG GLU VAL ARG TRP ARG SEQRES 13 B 353 PRO GLU HIS PHE TRP LYS PRO GLY THR ALA VAL ASP VAL SEQRES 14 B 353 ALA VAL ASN THR TYR GLY VAL ASP LEU GLY GLU GLY MET SEQRES 15 B 353 PHE GLY GLU ASP ASN VAL GLN THR HIS PHE THR ILE GLY SEQRES 16 B 353 ASP GLU VAL ILE ALA THR ALA ASP ASP ASN THR LYS ILE SEQRES 17 B 353 LEU THR VAL ARG VAL ASN GLY GLU VAL VAL LYS SER MET SEQRES 18 B 353 PRO THR SER MET GLY LYS ASP SER THR PRO THR ALA ASN SEQRES 19 B 353 GLY ILE TYR ILE VAL GLY SER ARG TYR LYS HIS ILE ILE SEQRES 20 B 353 MET ASP SER SER THR TYR GLY VAL PRO VAL ASN SER PRO SEQRES 21 B 353 ASN GLY TYR ARG THR ASP VAL ASP TRP ALA THR GLN ILE SEQRES 22 B 353 SER TYR SER GLY VAL PHE VAL HIS SER ALA PRO TRP SER SEQRES 23 B 353 VAL GLY ALA GLN GLY HIS THR ASN THR SER HIS GLY CYS SEQRES 24 B 353 LEU ASN VAL SER PRO SER ASN ALA GLN TRP PHE TYR ASP SEQRES 25 B 353 HIS VAL LYS ARG GLY ASP ILE VAL GLU VAL VAL ASN THR SEQRES 26 B 353 VAL GLY GLY THR LEU PRO GLY ILE ASP GLY LEU GLY ASP SEQRES 27 B 353 TRP ASN ILE PRO TRP ASP GLN TRP ARG ALA GLY ASN ALA SEQRES 28 B 353 LYS ALA HET 58U A 501 13 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET PEG A 507 4 HET PEG A 508 4 HET PEG A 509 7 HET PGE A 510 10 HET PGE A 511 10 HET PGE A 512 24 HET PGE A 513 24 HET GOL A 514 6 HET GOL A 515 6 HET EDO A 516 3 HET 58U B 501 13 HET SO4 B 502 5 HET SO4 B 503 5 HET SO4 B 504 5 HET SO4 B 505 5 HET PEG B 506 4 HET PEG B 507 4 HET PEG B 508 4 HET PEG B 509 4 HET PEG B 510 17 HET PEG B 511 17 HET PGE B 512 10 HET PGE B 513 10 HET PGE B 514 10 HET GOL B 515 6 HET GOL B 516 6 HET EDO B 517 3 HETNAM 58U (4S)-4-METHYL-2,5,7-TRIOXOHEPTANOIC ACID HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 58U 2(C8 H10 O5) FORMUL 4 SO4 9(O4 S 2-) FORMUL 9 PEG 9(C4 H10 O3) FORMUL 12 PGE 7(C6 H14 O4) FORMUL 16 GOL 4(C3 H8 O3) FORMUL 18 EDO 2(C2 H6 O2) FORMUL 36 HOH *409(H2 O) HELIX 1 AA1 ASP A 180 ALA A 187 1 8 HELIX 2 AA2 SER A 306 GLY A 309 5 4 HELIX 3 AA3 PRO A 339 VAL A 342 5 4 HELIX 4 AA4 SER A 358 VAL A 369 1 12 HELIX 5 AA5 GLY A 392 ILE A 396 5 5 HELIX 6 AA6 PRO A 397 GLY A 404 1 8 HELIX 7 AA7 ASP B 180 ALA B 187 1 8 HELIX 8 AA8 SER B 306 GLY B 309 5 4 HELIX 9 AA9 PRO B 339 VAL B 342 5 4 HELIX 10 AB1 SER B 358 VAL B 369 1 12 HELIX 11 AB2 GLY B 392 ILE B 396 5 5 HELIX 12 AB3 PRO B 397 GLY B 404 1 8 SHEET 1 AA1 4 LYS A 61 ALA A 64 0 SHEET 2 AA1 4 SER A 80 ALA A 84 -1 O THR A 82 N THR A 63 SHEET 3 AA1 4 ARG A 111 THR A 114 -1 O TRP A 112 N VAL A 81 SHEET 4 AA1 4 GLY A 103 LEU A 105 -1 N ARG A 104 O SER A 113 SHEET 1 AA2 3 VAL A 87 VAL A 94 0 SHEET 2 AA2 3 ARG A 123 GLY A 132 -1 O THR A 129 N ALA A 89 SHEET 3 AA2 3 GLY A 135 GLN A 144 -1 O LEU A 141 N LEU A 126 SHEET 1 AA3 2 HIS A 150 THR A 152 0 SHEET 2 AA3 2 MET A 237 GLY A 239 1 O PHE A 238 N HIS A 150 SHEET 1 AA4 4 PRO A 154 MET A 157 0 SHEET 2 AA4 4 VAL A 170 PHE A 174 -1 O ARG A 173 N TYR A 155 SHEET 3 AA4 4 GLU A 207 PRO A 212 -1 O TRP A 210 N VAL A 170 SHEET 4 AA4 4 GLY A 198 TRP A 202 -1 N TYR A 201 O ARG A 209 SHEET 1 AA5 4 VAL A 163 VAL A 164 0 SHEET 2 AA5 4 VAL A 243 ILE A 249 1 O THR A 248 N VAL A 164 SHEET 3 AA5 4 ALA A 221 VAL A 226 -1 N VAL A 224 O THR A 245 SHEET 4 AA5 4 ILE A 188 ASN A 193 -1 N ASN A 193 O ALA A 221 SHEET 1 AA6 5 GLU A 271 PRO A 277 0 SHEET 2 AA6 5 ILE A 263 VAL A 268 -1 N LEU A 264 O MET A 276 SHEET 3 AA6 5 VAL A 253 ASP A 258 -1 N THR A 256 O THR A 265 SHEET 4 AA6 5 ILE A 374 VAL A 378 1 O GLU A 376 N ALA A 257 SHEET 5 AA6 5 GLY A 290 ILE A 293 -1 N TYR A 292 O VAL A 375 SHEET 1 AA7 4 ARG A 297 ASP A 304 0 SHEET 2 AA7 4 ARG A 319 GLN A 327 -1 O THR A 320 N MET A 303 SHEET 3 AA7 4 PHE A 334 SER A 337 -1 O VAL A 335 N THR A 326 SHEET 4 AA7 4 LEU A 355 VAL A 357 1 O LEU A 355 N PHE A 334 SHEET 1 AA8 4 LYS B 61 ALA B 64 0 SHEET 2 AA8 4 SER B 80 ALA B 84 -1 O ALA B 84 N LYS B 61 SHEET 3 AA8 4 ARG B 111 THR B 114 -1 O TRP B 112 N VAL B 81 SHEET 4 AA8 4 GLY B 103 LEU B 105 -1 N ARG B 104 O SER B 113 SHEET 1 AA9 3 VAL B 87 VAL B 94 0 SHEET 2 AA9 3 ARG B 123 GLY B 132 -1 O ASN B 127 N THR B 92 SHEET 3 AA9 3 GLY B 135 GLN B 144 -1 O LEU B 141 N LEU B 126 SHEET 1 AB1 2 HIS B 150 THR B 152 0 SHEET 2 AB1 2 MET B 237 GLY B 239 1 O PHE B 238 N HIS B 150 SHEET 1 AB2 4 PRO B 154 MET B 157 0 SHEET 2 AB2 4 VAL B 170 PHE B 174 -1 O ARG B 173 N TYR B 155 SHEET 3 AB2 4 GLU B 207 PRO B 212 -1 O TRP B 210 N VAL B 170 SHEET 4 AB2 4 GLY B 198 TRP B 202 -1 N TYR B 201 O ARG B 209 SHEET 1 AB3 4 VAL B 163 VAL B 164 0 SHEET 2 AB3 4 VAL B 243 ILE B 249 1 O THR B 248 N VAL B 164 SHEET 3 AB3 4 ALA B 221 VAL B 226 -1 N VAL B 224 O THR B 245 SHEET 4 AB3 4 ILE B 188 ASN B 193 -1 N ASN B 193 O ALA B 221 SHEET 1 AB4 5 GLU B 271 PRO B 277 0 SHEET 2 AB4 5 ILE B 263 VAL B 268 -1 N LEU B 264 O MET B 276 SHEET 3 AB4 5 VAL B 253 ASP B 258 -1 N THR B 256 O THR B 265 SHEET 4 AB4 5 ILE B 374 VAL B 378 1 O ILE B 374 N ALA B 255 SHEET 5 AB4 5 GLY B 290 ILE B 293 -1 N TYR B 292 O VAL B 375 SHEET 1 AB5 4 ARG B 297 ASP B 304 0 SHEET 2 AB5 4 ARG B 319 GLN B 327 -1 O THR B 320 N MET B 303 SHEET 3 AB5 4 PHE B 334 SER B 337 -1 O VAL B 335 N THR B 326 SHEET 4 AB5 4 LEU B 355 VAL B 357 1 O LEU B 355 N PHE B 334 LINK SG CYS A 354 C7 58U A 501 1555 1555 1.80 LINK SG CYS B 354 C7 58U B 501 1555 1555 1.80 CISPEP 1 MET A 157 PRO A 158 0 -0.82 CISPEP 2 ASN A 193 PRO A 194 0 -0.47 CISPEP 3 MET B 157 PRO B 158 0 3.31 CISPEP 4 ASN B 193 PRO B 194 0 -0.35 SITE 1 AC1 13 MET A 303 TYR A 318 GLY A 332 HIS A 336 SITE 2 AC1 13 TRP A 340 SER A 351 HIS A 352 GLY A 353 SITE 3 AC1 13 CYS A 354 ASN A 356 EDO A 516 HOH A 604 SITE 4 AC1 13 HOH A 715 SITE 1 AC2 8 ARG A 99 ARG A 122 SO4 A 506 HOH A 641 SITE 2 AC2 8 PRO B 311 VAL B 312 ASN B 313 HOH B 649 SITE 1 AC3 4 GLU A 162 ARG A 371 HOH A 611 HOH A 621 SITE 1 AC4 5 MET A 157 ARG A 209 TYR A 330 ARG A 371 SITE 2 AC4 5 HOH A 728 SITE 1 AC5 6 ARG A 104 SER A 106 PRO A 107 ARG A 111 SITE 2 AC5 6 HOH A 605 HOH A 713 SITE 1 AC6 6 ASN A 95 ARG A 99 ARG A 122 SO4 A 502 SITE 2 AC6 6 SER B 306 PRO B 311 SITE 1 AC7 3 ASN A 204 ASN A 205 HOH A 607 SITE 1 AC8 9 GLU A 185 ALA A 199 PHE A 200 TRP A 401 SITE 2 AC8 9 ARG A 402 GLY A 404 PEG A 509 HOH A 654 SITE 3 AC8 9 HOH A 690 SITE 1 AC9 7 ILE A 188 ILE A 190 GLY A 198 TRP A 210 SITE 2 AC9 7 PEG A 508 PGE A 511 HOH A 734 SITE 1 AD1 3 HIS A 214 PHE A 215 LYS B 186 SITE 1 AD2 7 LYS A 189 ILE A 190 THR A 192 VAL A 196 SITE 2 AD2 7 TRP A 210 PEG A 509 HOH A 657 SITE 1 AD3 6 VAL A 91 THR A 92 MET A 93 VAL A 101 SITE 2 AD3 6 GLY A 103 TRP A 112 SITE 1 AD4 12 THR A 256 ASP A 258 THR A 261 ILE A 263 SITE 2 AD4 12 THR A 265 HOH A 606 HOH A 618 VAL B 196 SITE 3 AD4 12 GLU B 197 GLY B 198 TRP B 210 PEG B 506 SITE 1 AD5 6 ARG A 181 TRP A 202 LEU A 203 ASN A 205 SITE 2 AD5 6 ASN A 405 HOH A 607 SITE 1 AD6 6 VAL A 75 ASP A 76 ALA A 77 PRO A 78 SITE 2 AD6 6 GLN A 117 LEU A 118 SITE 1 AD7 4 TYR A 318 SER A 331 58U A 501 HOH A 691 SITE 1 AD8 5 ARG B 297 ARG B 371 PEG B 510 HOH B 604 SITE 2 AD8 5 HOH B 643 SITE 1 AD9 5 PRO A 311 VAL A 312 ASN A 313 ARG B 122 SITE 2 AD9 5 SO4 B 504 SITE 1 AE1 7 SER A 306 PRO A 311 ASN B 95 ASN B 97 SITE 2 AE1 7 ARG B 99 ARG B 122 SO4 B 503 SITE 1 AE2 4 ARG B 104 PRO B 107 ARG B 111 HOH B 714 SITE 1 AE3 4 PGE A 513 ILE B 188 LYS B 189 ILE B 190 SITE 1 AE4 3 VAL A 71 HIS B 214 HOH B 605 SITE 1 AE5 5 LEU B 385 GLY B 387 ILE B 396 PGE B 514 SITE 2 AE5 5 HOH B 733 SITE 1 AE6 2 ASP B 251 HIS B 368 SITE 1 AE7 7 MET B 157 PRO B 158 GLY B 159 GLU B 162 SITE 2 AE7 7 VAL B 164 ARG B 371 SO4 B 502 SITE 1 AE8 5 ALA B 183 LYS B 186 ALA B 187 VAL B 231 SITE 2 AE8 5 ASP B 232 SITE 1 AE9 4 GLU B 376 TRP B 394 ASN B 395 HOH B 621 SITE 1 AF1 7 GLU B 168 PRO B 169 GLY B 295 SER B 296 SITE 2 AF1 7 GLN B 327 TYR B 330 ARG B 371 SITE 1 AF2 10 ARG B 181 TYR B 201 TRP B 202 LEU B 203 SITE 2 AF2 10 ILE B 388 ASN B 405 PEG B 508 HOH B 642 SITE 3 AF2 10 HOH B 688 HOH B 699 SITE 1 AF3 5 GLU B 213 HIS B 214 PHE B 215 ILE B 291 SITE 2 AF3 5 TRP B 394 SITE 1 AF4 3 ALA B 90 VAL B 91 LEU B 105 SITE 1 AF5 4 TYR B 318 SER B 331 GLY B 353 58U B 501 SITE 1 AF6 14 SER B 279 MET B 280 TYR B 318 GLY B 332 SITE 2 AF6 14 PHE B 334 HIS B 336 TRP B 340 SER B 351 SITE 3 AF6 14 HIS B 352 GLY B 353 LEU B 355 ASN B 356 SITE 4 AF6 14 EDO B 517 HOH B 697 CRYST1 60.934 94.400 75.385 90.00 92.88 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016411 0.000000 0.000826 0.00000 SCALE2 0.000000 0.010593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013282 0.00000