data_5DCN # _entry.id 5DCN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5DCN WWPDB D_1000213015 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DCN _pdbx_database_status.recvd_initial_deposition_date 2015-08-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stadel, D.' 1 'Huber, J.' 2 'Dotsch, V.' 3 'Rogov, V.V.' 4 'Behrends, C.' 5 'Akutsu, M.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Cell _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-2765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 89 _citation.page_last 104 _citation.title 'TECPR2 Cooperates with LC3C to Regulate COPII-Dependent ER Export.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2015.09.010 _citation.pdbx_database_id_PubMed 26431026 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Stadel, D.' 1 primary 'Millarte, V.' 2 primary 'Tillmann, K.D.' 3 primary 'Huber, J.' 4 primary 'Tamin-Yecheskel, B.C.' 5 primary 'Akutsu, M.' 6 primary 'Demishtein, A.' 7 primary 'Ben-Zeev, B.' 8 primary 'Anikster, Y.' 9 primary 'Perez, F.' 10 primary 'Dotsch, V.' 11 primary 'Elazar, Z.' 12 primary 'Rogov, V.V.' 13 primary 'Farhan, H.' 14 primary 'Behrends, C.' 15 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 5DCN _cell.details ? _cell.formula_units_Z ? _cell.length_a 60.705 _cell.length_a_esd ? _cell.length_b 60.705 _cell.length_b_esd ? _cell.length_c 99.946 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Microtubule-associated proteins 1A/1B light chain 3B' 14847.955 1 ? ? 'UNP residues 2-119' ? 2 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 3 water nat water 18.015 58 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Autophagy-related protein LC3 B,Autophagy-related ubiquitin-like modifier LC3 B,MAP1 light chain 3-like protein 2,MAP1A/MAP1B light chain 3 B,MAP1A/MAP1B LC3 B,Microtubule-associated protein 1 light chain 3 beta ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DEWEVIGGPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQL NANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF ; _entity_poly.pdbx_seq_one_letter_code_can ;DEWEVIGGPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQL NANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLU n 1 3 TRP n 1 4 GLU n 1 5 VAL n 1 6 ILE n 1 7 GLY n 1 8 GLY n 1 9 PRO n 1 10 SER n 1 11 GLU n 1 12 LYS n 1 13 THR n 1 14 PHE n 1 15 LYS n 1 16 GLN n 1 17 ARG n 1 18 ARG n 1 19 THR n 1 20 PHE n 1 21 GLU n 1 22 GLN n 1 23 ARG n 1 24 VAL n 1 25 GLU n 1 26 ASP n 1 27 VAL n 1 28 ARG n 1 29 LEU n 1 30 ILE n 1 31 ARG n 1 32 GLU n 1 33 GLN n 1 34 HIS n 1 35 PRO n 1 36 THR n 1 37 LYS n 1 38 ILE n 1 39 PRO n 1 40 VAL n 1 41 ILE n 1 42 ILE n 1 43 GLU n 1 44 ARG n 1 45 TYR n 1 46 LYS n 1 47 GLY n 1 48 GLU n 1 49 LYS n 1 50 GLN n 1 51 LEU n 1 52 PRO n 1 53 VAL n 1 54 LEU n 1 55 ASP n 1 56 LYS n 1 57 THR n 1 58 LYS n 1 59 PHE n 1 60 LEU n 1 61 VAL n 1 62 PRO n 1 63 ASP n 1 64 HIS n 1 65 VAL n 1 66 ASN n 1 67 MET n 1 68 SER n 1 69 GLU n 1 70 LEU n 1 71 ILE n 1 72 LYS n 1 73 ILE n 1 74 ILE n 1 75 ARG n 1 76 ARG n 1 77 ARG n 1 78 LEU n 1 79 GLN n 1 80 LEU n 1 81 ASN n 1 82 ALA n 1 83 ASN n 1 84 GLN n 1 85 ALA n 1 86 PHE n 1 87 PHE n 1 88 LEU n 1 89 LEU n 1 90 VAL n 1 91 ASN n 1 92 GLY n 1 93 HIS n 1 94 SER n 1 95 MET n 1 96 VAL n 1 97 SER n 1 98 VAL n 1 99 SER n 1 100 THR n 1 101 PRO n 1 102 ILE n 1 103 SER n 1 104 GLU n 1 105 VAL n 1 106 TYR n 1 107 GLU n 1 108 SER n 1 109 GLU n 1 110 LYS n 1 111 ASP n 1 112 GLU n 1 113 ASP n 1 114 GLY n 1 115 PHE n 1 116 LEU n 1 117 TYR n 1 118 MET n 1 119 VAL n 1 120 TYR n 1 121 ALA n 1 122 SER n 1 123 GLN n 1 124 GLU n 1 125 THR n 1 126 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 126 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MAP1LC3B, MAP1ALC3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MLP3B_HUMAN _struct_ref.pdbx_db_accession Q9GZQ8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFL LVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5DCN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 126 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9GZQ8 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 119 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 119 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DCN ASP A 1 ? UNP Q9GZQ8 ? ? 'expression tag' -6 1 1 5DCN GLU A 2 ? UNP Q9GZQ8 ? ? 'expression tag' -5 2 1 5DCN TRP A 3 ? UNP Q9GZQ8 ? ? 'expression tag' -4 3 1 5DCN GLU A 4 ? UNP Q9GZQ8 ? ? 'expression tag' -3 4 1 5DCN VAL A 5 ? UNP Q9GZQ8 ? ? 'expression tag' -2 5 1 5DCN ILE A 6 ? UNP Q9GZQ8 ? ? 'expression tag' -1 6 1 5DCN GLY A 7 ? UNP Q9GZQ8 ? ? 'expression tag' 0 7 1 5DCN GLY A 8 ? UNP Q9GZQ8 ? ? 'expression tag' 1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DCN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.58 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.8M Lithium sulphate, 0.01M Magnesium chloride, 0.05M MES monohydrate, pH5.6' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-05-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DCN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 19.87 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14950 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 138.370 _refine.B_iso_mean 47.5300 _refine.B_iso_min 22.290 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DCN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 19.4890 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14856 _refine.ls_number_reflns_R_free 1498 _refine.ls_number_reflns_R_work 13358 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.4800 _refine.ls_percent_reflns_R_free 10.0800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2131 _refine.ls_R_factor_R_free 0.2473 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2091 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.0000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1900 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.7508 _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 19.4890 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 58 _refine_hist.number_atoms_total 1120 _refine_hist.pdbx_number_residues_total 126 _refine_hist.pdbx_B_iso_mean_ligand 84.05 _refine_hist.pdbx_B_iso_mean_solvent 50.96 _refine_hist.pdbx_number_atoms_protein 1042 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 1103 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.648 ? 1491 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 160 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 191 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.897 ? 426 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0000 2.0645 1316 . 139 1177 99.0000 . . . 0.3394 . 0.2741 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.0645 2.1382 1315 . 125 1190 99.0000 . . . 0.3269 . 0.2576 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.1382 2.2237 1334 . 139 1195 99.0000 . . . 0.2919 . 0.2303 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.2237 2.3248 1319 . 133 1186 99.0000 . . . 0.3096 . 0.2390 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.3248 2.4471 1328 . 126 1202 100.0000 . . . 0.2614 . 0.2238 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.4471 2.6001 1339 . 133 1206 99.0000 . . . 0.2821 . 0.2262 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.6001 2.8003 1342 . 147 1195 100.0000 . . . 0.2731 . 0.2260 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.8003 3.0812 1354 . 145 1209 100.0000 . . . 0.2803 . 0.2174 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.0812 3.5247 1369 . 117 1252 100.0000 . . . 0.2881 . 0.2075 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.5247 4.4321 1378 . 149 1229 100.0000 . . . 0.1946 . 0.1812 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 4.4321 19.4897 1462 . 145 1317 100.0000 . . . 0.2199 . 0.2030 . . . . . . 11 . . . # _struct.entry_id 5DCN _struct.title 'Crystal structure of LC3 in complex with TECPR2 LIR' _struct.pdbx_descriptor 'Microtubule-associated proteins 1A/1B light chain 3B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DCN _struct_keywords.text 'LC3, Autophagy, cell cycle' _struct_keywords.pdbx_keywords 'CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 13 ? ARG A 18 ? THR A 6 ARG A 11 1 ? 6 HELX_P HELX_P2 AA2 THR A 19 ? HIS A 34 ? THR A 12 HIS A 27 1 ? 16 HELX_P HELX_P3 AA3 ASN A 66 ? LEU A 78 ? ASN A 59 LEU A 71 1 ? 13 HELX_P HELX_P4 AA4 PRO A 101 ? LYS A 110 ? PRO A 94 LYS A 103 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 58 ? PRO A 62 ? LYS A 51 PRO A 55 AA1 2 LYS A 37 ? ARG A 44 ? LYS A 30 ARG A 37 AA1 3 LEU A 116 ? ALA A 121 ? LEU A 109 ALA A 114 AA1 4 PHE A 87 ? VAL A 90 ? PHE A 80 VAL A 83 AA1 5 HIS A 93 ? SER A 94 ? HIS A 86 SER A 87 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 61 ? O VAL A 54 N ILE A 38 ? N ILE A 31 AA1 2 3 N ILE A 41 ? N ILE A 34 O MET A 118 ? O MET A 111 AA1 3 4 O VAL A 119 ? O VAL A 112 N LEU A 89 ? N LEU A 82 AA1 4 5 N VAL A 90 ? N VAL A 83 O HIS A 93 ? O HIS A 86 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 5 'binding site for residue SO4 A 201' AC2 Software A SO4 202 ? 4 'binding site for residue SO4 A 202' AC3 Software A SO4 203 ? 5 'binding site for residue SO4 A 203' AC4 Software A SO4 204 ? 3 'binding site for residue SO4 A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ILE A 6 ? ILE A -1 . ? 1_555 ? 2 AC1 5 GLY A 7 ? GLY A 0 . ? 1_555 ? 3 AC1 5 GLY A 8 ? GLY A 1 . ? 1_555 ? 4 AC1 5 ARG A 77 ? ARG A 70 . ? 5_565 ? 5 AC1 5 HOH F . ? HOH A 306 . ? 5_565 ? 6 AC2 4 GLN A 16 ? GLN A 9 . ? 1_555 ? 7 AC2 4 ARG A 75 ? ARG A 68 . ? 2_564 ? 8 AC2 4 ARG A 76 ? ARG A 69 . ? 2_564 ? 9 AC2 4 ALA A 82 ? ALA A 75 . ? 2_564 ? 10 AC3 5 HIS A 34 ? HIS A 27 . ? 1_555 ? 11 AC3 5 THR A 36 ? THR A 29 . ? 1_555 ? 12 AC3 5 LYS A 37 ? LYS A 30 . ? 1_555 ? 13 AC3 5 LYS A 49 ? LYS A 42 . ? 5_665 ? 14 AC3 5 HOH F . ? HOH A 304 . ? 1_555 ? 15 AC4 3 THR A 13 ? THR A 6 . ? 1_555 ? 16 AC4 3 ARG A 44 ? ARG A 37 . ? 1_555 ? 17 AC4 3 LYS A 46 ? LYS A 39 . ? 1_555 ? # _atom_sites.entry_id 5DCN _atom_sites.fract_transf_matrix[1][1] 0.016473 _atom_sites.fract_transf_matrix[1][2] 0.009511 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019022 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010005 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 -6 -6 ASP ASP A . n A 1 2 GLU 2 -5 -5 GLU GLU A . n A 1 3 TRP 3 -4 -4 TRP TRP A . n A 1 4 GLU 4 -3 -3 GLU GLU A . n A 1 5 VAL 5 -2 -2 VAL VAL A . n A 1 6 ILE 6 -1 -1 ILE ILE A . n A 1 7 GLY 7 0 0 GLY GLY A . n A 1 8 GLY 8 1 1 GLY GLY A . n A 1 9 PRO 9 2 2 PRO PRO A . n A 1 10 SER 10 3 3 SER SER A . n A 1 11 GLU 11 4 4 GLU GLU A . n A 1 12 LYS 12 5 5 LYS LYS A . n A 1 13 THR 13 6 6 THR THR A . n A 1 14 PHE 14 7 7 PHE PHE A . n A 1 15 LYS 15 8 8 LYS LYS A . n A 1 16 GLN 16 9 9 GLN GLN A . n A 1 17 ARG 17 10 10 ARG ARG A . n A 1 18 ARG 18 11 11 ARG ARG A . n A 1 19 THR 19 12 12 THR THR A . n A 1 20 PHE 20 13 13 PHE PHE A . n A 1 21 GLU 21 14 14 GLU GLU A . n A 1 22 GLN 22 15 15 GLN GLN A . n A 1 23 ARG 23 16 16 ARG ARG A . n A 1 24 VAL 24 17 17 VAL VAL A . n A 1 25 GLU 25 18 18 GLU GLU A . n A 1 26 ASP 26 19 19 ASP ASP A . n A 1 27 VAL 27 20 20 VAL VAL A . n A 1 28 ARG 28 21 21 ARG ARG A . n A 1 29 LEU 29 22 22 LEU LEU A . n A 1 30 ILE 30 23 23 ILE ILE A . n A 1 31 ARG 31 24 24 ARG ARG A . n A 1 32 GLU 32 25 25 GLU GLU A . n A 1 33 GLN 33 26 26 GLN GLN A . n A 1 34 HIS 34 27 27 HIS HIS A . n A 1 35 PRO 35 28 28 PRO PRO A . n A 1 36 THR 36 29 29 THR THR A . n A 1 37 LYS 37 30 30 LYS LYS A . n A 1 38 ILE 38 31 31 ILE ILE A . n A 1 39 PRO 39 32 32 PRO PRO A . n A 1 40 VAL 40 33 33 VAL VAL A . n A 1 41 ILE 41 34 34 ILE ILE A . n A 1 42 ILE 42 35 35 ILE ILE A . n A 1 43 GLU 43 36 36 GLU GLU A . n A 1 44 ARG 44 37 37 ARG ARG A . n A 1 45 TYR 45 38 38 TYR TYR A . n A 1 46 LYS 46 39 39 LYS LYS A . n A 1 47 GLY 47 40 40 GLY GLY A . n A 1 48 GLU 48 41 41 GLU GLU A . n A 1 49 LYS 49 42 42 LYS LYS A . n A 1 50 GLN 50 43 43 GLN GLN A . n A 1 51 LEU 51 44 44 LEU LEU A . n A 1 52 PRO 52 45 45 PRO PRO A . n A 1 53 VAL 53 46 46 VAL VAL A . n A 1 54 LEU 54 47 47 LEU LEU A . n A 1 55 ASP 55 48 48 ASP ASP A . n A 1 56 LYS 56 49 49 LYS LYS A . n A 1 57 THR 57 50 50 THR THR A . n A 1 58 LYS 58 51 51 LYS LYS A . n A 1 59 PHE 59 52 52 PHE PHE A . n A 1 60 LEU 60 53 53 LEU LEU A . n A 1 61 VAL 61 54 54 VAL VAL A . n A 1 62 PRO 62 55 55 PRO PRO A . n A 1 63 ASP 63 56 56 ASP ASP A . n A 1 64 HIS 64 57 57 HIS HIS A . n A 1 65 VAL 65 58 58 VAL VAL A . n A 1 66 ASN 66 59 59 ASN ASN A . n A 1 67 MET 67 60 60 MET MET A . n A 1 68 SER 68 61 61 SER SER A . n A 1 69 GLU 69 62 62 GLU GLU A . n A 1 70 LEU 70 63 63 LEU LEU A . n A 1 71 ILE 71 64 64 ILE ILE A . n A 1 72 LYS 72 65 65 LYS LYS A . n A 1 73 ILE 73 66 66 ILE ILE A . n A 1 74 ILE 74 67 67 ILE ILE A . n A 1 75 ARG 75 68 68 ARG ARG A . n A 1 76 ARG 76 69 69 ARG ARG A . n A 1 77 ARG 77 70 70 ARG ARG A . n A 1 78 LEU 78 71 71 LEU LEU A . n A 1 79 GLN 79 72 72 GLN GLN A . n A 1 80 LEU 80 73 73 LEU LEU A . n A 1 81 ASN 81 74 74 ASN ASN A . n A 1 82 ALA 82 75 75 ALA ALA A . n A 1 83 ASN 83 76 76 ASN ASN A . n A 1 84 GLN 84 77 77 GLN GLN A . n A 1 85 ALA 85 78 78 ALA ALA A . n A 1 86 PHE 86 79 79 PHE PHE A . n A 1 87 PHE 87 80 80 PHE PHE A . n A 1 88 LEU 88 81 81 LEU LEU A . n A 1 89 LEU 89 82 82 LEU LEU A . n A 1 90 VAL 90 83 83 VAL VAL A . n A 1 91 ASN 91 84 84 ASN ASN A . n A 1 92 GLY 92 85 85 GLY GLY A . n A 1 93 HIS 93 86 86 HIS HIS A . n A 1 94 SER 94 87 87 SER SER A . n A 1 95 MET 95 88 88 MET MET A . n A 1 96 VAL 96 89 89 VAL VAL A . n A 1 97 SER 97 90 90 SER SER A . n A 1 98 VAL 98 91 91 VAL VAL A . n A 1 99 SER 99 92 92 SER SER A . n A 1 100 THR 100 93 93 THR THR A . n A 1 101 PRO 101 94 94 PRO PRO A . n A 1 102 ILE 102 95 95 ILE ILE A . n A 1 103 SER 103 96 96 SER SER A . n A 1 104 GLU 104 97 97 GLU GLU A . n A 1 105 VAL 105 98 98 VAL VAL A . n A 1 106 TYR 106 99 99 TYR TYR A . n A 1 107 GLU 107 100 100 GLU GLU A . n A 1 108 SER 108 101 101 SER SER A . n A 1 109 GLU 109 102 102 GLU GLU A . n A 1 110 LYS 110 103 103 LYS LYS A . n A 1 111 ASP 111 104 104 ASP ASP A . n A 1 112 GLU 112 105 105 GLU GLU A . n A 1 113 ASP 113 106 106 ASP ASP A . n A 1 114 GLY 114 107 107 GLY GLY A . n A 1 115 PHE 115 108 108 PHE PHE A . n A 1 116 LEU 116 109 109 LEU LEU A . n A 1 117 TYR 117 110 110 TYR TYR A . n A 1 118 MET 118 111 111 MET MET A . n A 1 119 VAL 119 112 112 VAL VAL A . n A 1 120 TYR 120 113 113 TYR TYR A . n A 1 121 ALA 121 114 114 ALA ALA A . n A 1 122 SER 122 115 115 SER SER A . n A 1 123 GLN 123 116 116 GLN GLN A . n A 1 124 GLU 124 117 117 GLU GLU A . n A 1 125 THR 125 118 118 THR THR A . n A 1 126 PHE 126 119 119 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 201 1 SO4 SO4 A . C 2 SO4 1 202 2 SO4 SO4 A . D 2 SO4 1 203 3 SO4 SO4 A . E 2 SO4 1 204 4 SO4 SO4 A . F 3 HOH 1 301 10 HOH HOH A . F 3 HOH 2 302 1 HOH HOH A . F 3 HOH 3 303 22 HOH HOH A . F 3 HOH 4 304 54 HOH HOH A . F 3 HOH 5 305 33 HOH HOH A . F 3 HOH 6 306 58 HOH HOH A . F 3 HOH 7 307 41 HOH HOH A . F 3 HOH 8 308 43 HOH HOH A . F 3 HOH 9 309 30 HOH HOH A . F 3 HOH 10 310 52 HOH HOH A . F 3 HOH 11 311 25 HOH HOH A . F 3 HOH 12 312 51 HOH HOH A . F 3 HOH 13 313 29 HOH HOH A . F 3 HOH 14 314 27 HOH HOH A . F 3 HOH 15 315 6 HOH HOH A . F 3 HOH 16 316 15 HOH HOH A . F 3 HOH 17 317 44 HOH HOH A . F 3 HOH 18 318 39 HOH HOH A . F 3 HOH 19 319 12 HOH HOH A . F 3 HOH 20 320 20 HOH HOH A . F 3 HOH 21 321 2 HOH HOH A . F 3 HOH 22 322 34 HOH HOH A . F 3 HOH 23 323 5 HOH HOH A . F 3 HOH 24 324 24 HOH HOH A . F 3 HOH 25 325 3 HOH HOH A . F 3 HOH 26 326 7 HOH HOH A . F 3 HOH 27 327 18 HOH HOH A . F 3 HOH 28 328 4 HOH HOH A . F 3 HOH 29 329 13 HOH HOH A . F 3 HOH 30 330 8 HOH HOH A . F 3 HOH 31 331 23 HOH HOH A . F 3 HOH 32 332 48 HOH HOH A . F 3 HOH 33 333 11 HOH HOH A . F 3 HOH 34 334 42 HOH HOH A . F 3 HOH 35 335 16 HOH HOH A . F 3 HOH 36 336 14 HOH HOH A . F 3 HOH 37 337 31 HOH HOH A . F 3 HOH 38 338 38 HOH HOH A . F 3 HOH 39 339 49 HOH HOH A . F 3 HOH 40 340 37 HOH HOH A . F 3 HOH 41 341 32 HOH HOH A . F 3 HOH 42 342 45 HOH HOH A . F 3 HOH 43 343 26 HOH HOH A . F 3 HOH 44 344 55 HOH HOH A . F 3 HOH 45 345 19 HOH HOH A . F 3 HOH 46 346 17 HOH HOH A . F 3 HOH 47 347 50 HOH HOH A . F 3 HOH 48 348 21 HOH HOH A . F 3 HOH 49 349 36 HOH HOH A . F 3 HOH 50 350 47 HOH HOH A . F 3 HOH 51 351 46 HOH HOH A . F 3 HOH 52 352 28 HOH HOH A . F 3 HOH 53 353 53 HOH HOH A . F 3 HOH 54 354 56 HOH HOH A . F 3 HOH 55 355 57 HOH HOH A . F 3 HOH 56 356 40 HOH HOH A . F 3 HOH 57 357 35 HOH HOH A . F 3 HOH 58 358 9 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 600 ? 1 MORE -42 ? 1 'SSA (A^2)' 8650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2016-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -30.1801 _pdbx_refine_tls.origin_y 21.7686 _pdbx_refine_tls.origin_z 14.5400 _pdbx_refine_tls.T[1][1] 0.2892 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0680 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0053 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.2533 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0247 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.1519 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 4.6003 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 1.0935 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.5471 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.4424 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0551 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.5083 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0656 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0281 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0154 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0516 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0245 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0155 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0114 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0040 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0842 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A -6 ? ? A 119 ? all 2 'X-RAY DIFFRACTION' 1 ? ? B 1 ? ? B 4 ? all 3 'X-RAY DIFFRACTION' 1 ? ? S 1 ? ? S 58 ? all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SO4 _pdbx_validate_symm_contact.auth_seq_id_1 201 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 306 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_565 _pdbx_validate_symm_contact.dist 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 74 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -69.81 _pdbx_validate_torsion.psi -177.82 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP -6 ? CG ? A ASP 1 CG 2 1 Y 1 A ASP -6 ? OD1 ? A ASP 1 OD1 3 1 Y 1 A ASP -6 ? OD2 ? A ASP 1 OD2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #