HEADER TRANSCRIPTION REGULATOR 24-AUG-15 5DD8 TITLE THE CRYSTAL STRUCTURE OF HUCR MUTANT (HUCR-E48Q) FROM DEINOCOCCUS TITLE 2 RADIODURANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, MARR FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 GENE: DR_1159; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUCR, TRANSCRIPTION FACTOR, MARR, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR D.K.DEOCHAND,I.C.PERERA,R.B.CROCHET,N.C.GILBERT,M.E.NEWCOMER,A.GROVE REVDAT 6 27-SEP-23 5DD8 1 REMARK REVDAT 5 27-NOV-19 5DD8 1 REMARK REVDAT 4 27-SEP-17 5DD8 1 REMARK REVDAT 3 10-AUG-16 5DD8 1 AUTHOR JRNL REVDAT 2 23-SEP-15 5DD8 1 JRNL REVDAT 1 09-SEP-15 5DD8 0 JRNL AUTH D.K.DEOCHAND,I.C.PERERA,R.B.CROCHET,N.C.GILBERT, JRNL AUTH 2 M.E.NEWCOMER,A.GROVE JRNL TITL HISTIDINE SWITCH CONTROLLING PH-DEPENDENT PROTEIN FOLDING JRNL TITL 2 AND DNA BINDING IN A TRANSCRIPTION FACTOR AT THE CORE OF JRNL TITL 3 SYNTHETIC NETWORK DEVICES. JRNL REF MOL BIOSYST V. 12 2417 2016 JRNL REFN ESSN 1742-2051 JRNL PMID 27282811 JRNL DOI 10.1039/C6MB00304D REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 18943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1021 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1295 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2930 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.55000 REMARK 3 B22 (A**2) : 0.55000 REMARK 3 B33 (A**2) : -1.79000 REMARK 3 B12 (A**2) : 0.28000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.237 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.911 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2418 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2458 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3276 ; 1.734 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5612 ; 0.878 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 7.058 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;38.035 ;21.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 422 ;18.482 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;17.021 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 394 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2676 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 534 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1242 ; 3.340 ; 3.625 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1241 ; 3.340 ; 3.623 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1542 ; 4.970 ; 5.391 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1543 ; 4.968 ; 5.394 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1176 ; 3.344 ; 3.996 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1177 ; 3.343 ; 3.999 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1735 ; 5.006 ; 5.860 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2829 ; 8.199 ;28.820 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2798 ; 8.217 ;28.613 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 8 179 B 8 179 9349 0.04 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 47 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8484 26.2478 10.6106 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.1858 REMARK 3 T33: 0.1071 T12: -0.0377 REMARK 3 T13: -0.0674 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.4606 L22: 2.0522 REMARK 3 L33: 7.9951 L12: 0.9087 REMARK 3 L13: 3.2330 L23: 2.2258 REMARK 3 S TENSOR REMARK 3 S11: -0.2813 S12: -0.1047 S13: 0.2366 REMARK 3 S21: -0.0476 S22: -0.0124 S23: 0.0606 REMARK 3 S31: -0.5016 S32: -0.2076 S33: 0.2937 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 48 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6565 5.3551 -12.9008 REMARK 3 T TENSOR REMARK 3 T11: 0.4059 T22: 0.2731 REMARK 3 T33: 0.1151 T12: -0.0069 REMARK 3 T13: -0.1975 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 2.7518 L22: 1.7705 REMARK 3 L33: 6.2757 L12: 0.3154 REMARK 3 L13: 2.6453 L23: 1.6822 REMARK 3 S TENSOR REMARK 3 S11: 0.8488 S12: 0.0917 S13: -0.3508 REMARK 3 S21: 0.1535 S22: -0.1493 S23: -0.2356 REMARK 3 S31: 1.2314 S32: 0.5278 S33: -0.6994 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): -18.2471 11.7095 -13.4125 REMARK 3 T TENSOR REMARK 3 T11: 0.1230 T22: 0.1897 REMARK 3 T33: 0.0455 T12: -0.0589 REMARK 3 T13: -0.0544 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 2.2266 L22: 3.1514 REMARK 3 L33: 6.7579 L12: 1.3138 REMARK 3 L13: 2.9431 L23: 2.9138 REMARK 3 S TENSOR REMARK 3 S11: 0.2251 S12: -0.2401 S13: 0.0390 REMARK 3 S21: -0.0080 S22: -0.2076 S23: 0.1890 REMARK 3 S31: 0.4565 S32: -0.1687 S33: -0.0176 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 38 REMARK 3 ORIGIN FOR THE GROUP (A): -21.2258 16.8721 -20.5452 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.1879 REMARK 3 T33: 0.0945 T12: -0.0608 REMARK 3 T13: -0.0589 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 4.5381 L22: 1.4584 REMARK 3 L33: 6.6776 L12: -0.0781 REMARK 3 L13: 3.8794 L23: 2.0500 REMARK 3 S TENSOR REMARK 3 S11: -0.0221 S12: -0.2346 S13: 0.1510 REMARK 3 S21: -0.1835 S22: -0.1829 S23: 0.0002 REMARK 3 S31: -0.4294 S32: -0.3546 S33: 0.2050 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 39 B 113 REMARK 3 ORIGIN FOR THE GROUP (A): -0.8204 14.2367 3.8071 REMARK 3 T TENSOR REMARK 3 T11: 0.1830 T22: 0.2788 REMARK 3 T33: 0.0825 T12: -0.0083 REMARK 3 T13: -0.0462 T23: -0.1125 REMARK 3 L TENSOR REMARK 3 L11: 2.4171 L22: 1.5664 REMARK 3 L33: 5.8158 L12: 0.5684 REMARK 3 L13: 3.0756 L23: 2.1406 REMARK 3 S TENSOR REMARK 3 S11: 0.2087 S12: 0.3872 S13: -0.3026 REMARK 3 S21: 0.3161 S22: 0.3361 S23: -0.1380 REMARK 3 S31: 0.7269 S32: 0.6801 S33: -0.5448 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 114 B 179 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0362 21.6555 6.4336 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.1894 REMARK 3 T33: 0.0449 T12: -0.0547 REMARK 3 T13: 0.0037 T23: -0.0626 REMARK 3 L TENSOR REMARK 3 L11: 4.0276 L22: 1.2610 REMARK 3 L33: 6.7277 L12: 0.3562 REMARK 3 L13: 3.8862 L23: 1.0552 REMARK 3 S TENSOR REMARK 3 S11: -0.2109 S12: 0.2545 S13: 0.1836 REMARK 3 S21: 0.0280 S22: 0.2297 S23: -0.0482 REMARK 3 S31: 0.0655 S32: 0.5028 S33: -0.0187 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5DD8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000213046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19997 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 38.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10600 REMARK 200 FOR THE DATA SET : 2.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.68900 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2FBK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% (W/V) PEG 3350, 500 MM MGCL2, 100 REMARK 280 MM BIS-TRIS (PH 7.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.94167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 189.88333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 142.41250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 237.35417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.47083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 ARG A 4 REMARK 465 MET A 5 REMARK 465 ASP A 6 REMARK 465 ASN A 7 REMARK 465 GLN A 27 REMARK 465 GLY A 28 REMARK 465 PRO A 29 REMARK 465 ASP A 30 REMARK 465 SER A 31 REMARK 465 ASP A 32 REMARK 465 GLY A 33 REMARK 465 LEU A 34 REMARK 465 THR A 35 REMARK 465 ASP A 121 REMARK 465 GLU A 122 REMARK 465 ARG A 123 REMARK 465 ASP A 124 REMARK 465 ARG A 125 REMARK 465 ARG A 126 REMARK 465 SER A 127 REMARK 465 GLY A 180 REMARK 465 VAL A 181 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 ARG B 4 REMARK 465 MET B 5 REMARK 465 ASP B 6 REMARK 465 ASN B 7 REMARK 465 GLN B 27 REMARK 465 GLY B 28 REMARK 465 PRO B 29 REMARK 465 ASP B 30 REMARK 465 SER B 31 REMARK 465 ASP B 32 REMARK 465 GLY B 33 REMARK 465 LEU B 34 REMARK 465 THR B 35 REMARK 465 ASP B 121 REMARK 465 GLU B 122 REMARK 465 ARG B 123 REMARK 465 ASP B 124 REMARK 465 ARG B 125 REMARK 465 ARG B 126 REMARK 465 SER B 127 REMARK 465 GLY B 180 REMARK 465 VAL B 181 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 41 CG - SD - CE ANGL. DEV. = 13.4 DEGREES REMARK 500 MET B 41 CG - SD - CE ANGL. DEV. = 13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 9 175.72 60.62 REMARK 500 SER A 102 -32.00 -38.28 REMARK 500 SER A 129 122.21 139.46 REMARK 500 THR B 9 175.14 61.29 REMARK 500 SER B 102 -32.61 -37.87 REMARK 500 SER B 129 121.94 139.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 202 DBREF 5DD8 A 1 181 UNP Q9RV71 Q9RV71_DEIRA 1 181 DBREF 5DD8 B 1 181 UNP Q9RV71 Q9RV71_DEIRA 1 181 SEQADV 5DD8 GLN A 48 UNP Q9RV71 GLU 48 ENGINEERED MUTATION SEQADV 5DD8 GLN B 48 UNP Q9RV71 GLU 48 ENGINEERED MUTATION SEQRES 1 A 181 MET SER ALA ARG MET ASP ASN ASP THR ALA ALA LEU LEU SEQRES 2 A 181 GLU ARG ILE ARG SER ASP TRP ALA ARG LEU ASN HIS GLY SEQRES 3 A 181 GLN GLY PRO ASP SER ASP GLY LEU THR PRO SER ALA GLY SEQRES 4 A 181 PRO MET LEU THR LEU LEU LEU LEU GLN ARG LEU HIS ALA SEQRES 5 A 181 ALA LEU GLY ARG GLU ILE GLU ARG THR TYR ALA ALA SER SEQRES 6 A 181 GLY LEU ASN ALA ALA GLY TRP ASP LEU LEU LEU THR LEU SEQRES 7 A 181 TYR ARG SER ALA PRO PRO GLU GLY LEU ARG PRO THR GLU SEQRES 8 A 181 LEU SER ALA LEU ALA ALA ILE SER GLY PRO SER THR SER SEQRES 9 A 181 ASN ARG ILE VAL ARG LEU LEU GLU LYS GLY LEU ILE GLU SEQRES 10 A 181 ARG ARG GLU ASP GLU ARG ASP ARG ARG SER ALA SER ILE SEQRES 11 A 181 ARG LEU THR PRO GLN GLY ARG ALA LEU VAL THR HIS LEU SEQRES 12 A 181 LEU PRO ALA HIS LEU ALA THR THR GLN ARG VAL LEU ALA SEQRES 13 A 181 PRO LEU SER ALA GLN GLU GLN ARG THR LEU GLU GLU LEU SEQRES 14 A 181 ALA GLY ARG MET LEU ALA GLY LEU GLU GLN GLY VAL SEQRES 1 B 181 MET SER ALA ARG MET ASP ASN ASP THR ALA ALA LEU LEU SEQRES 2 B 181 GLU ARG ILE ARG SER ASP TRP ALA ARG LEU ASN HIS GLY SEQRES 3 B 181 GLN GLY PRO ASP SER ASP GLY LEU THR PRO SER ALA GLY SEQRES 4 B 181 PRO MET LEU THR LEU LEU LEU LEU GLN ARG LEU HIS ALA SEQRES 5 B 181 ALA LEU GLY ARG GLU ILE GLU ARG THR TYR ALA ALA SER SEQRES 6 B 181 GLY LEU ASN ALA ALA GLY TRP ASP LEU LEU LEU THR LEU SEQRES 7 B 181 TYR ARG SER ALA PRO PRO GLU GLY LEU ARG PRO THR GLU SEQRES 8 B 181 LEU SER ALA LEU ALA ALA ILE SER GLY PRO SER THR SER SEQRES 9 B 181 ASN ARG ILE VAL ARG LEU LEU GLU LYS GLY LEU ILE GLU SEQRES 10 B 181 ARG ARG GLU ASP GLU ARG ASP ARG ARG SER ALA SER ILE SEQRES 11 B 181 ARG LEU THR PRO GLN GLY ARG ALA LEU VAL THR HIS LEU SEQRES 12 B 181 LEU PRO ALA HIS LEU ALA THR THR GLN ARG VAL LEU ALA SEQRES 13 B 181 PRO LEU SER ALA GLN GLU GLN ARG THR LEU GLU GLU LEU SEQRES 14 B 181 ALA GLY ARG MET LEU ALA GLY LEU GLU GLN GLY VAL HET CL A 201 1 HET CL A 202 1 HET CL B 201 1 HET CL B 202 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 4(CL 1-) FORMUL 7 HOH *75(H2 O) HELIX 1 AA1 LEU A 12 ASN A 24 1 13 HELIX 2 AA2 ALA A 38 ALA A 64 1 27 HELIX 3 AA3 ASN A 68 ALA A 82 1 15 HELIX 4 AA4 ARG A 88 ALA A 96 1 9 HELIX 5 AA5 GLY A 100 SER A 104 5 5 HELIX 6 AA6 ASN A 105 LYS A 113 1 9 HELIX 7 AA7 THR A 133 ALA A 156 1 24 HELIX 8 AA8 SER A 159 GLU A 178 1 20 HELIX 9 AA9 LEU B 12 ASN B 24 1 13 HELIX 10 AB1 ALA B 38 ALA B 64 1 27 HELIX 11 AB2 ASN B 68 ALA B 82 1 15 HELIX 12 AB3 ARG B 88 ALA B 96 1 9 HELIX 13 AB4 GLY B 100 SER B 104 5 5 HELIX 14 AB5 ASN B 105 LYS B 113 1 9 HELIX 15 AB6 THR B 133 ALA B 156 1 24 HELIX 16 AB7 SER B 159 GLU B 178 1 20 SHEET 1 AA1 2 ILE A 116 ARG A 118 0 SHEET 2 AA1 2 ILE A 130 LEU A 132 -1 O ARG A 131 N GLU A 117 SHEET 1 AA2 2 ILE B 116 ARG B 118 0 SHEET 2 AA2 2 ILE B 130 LEU B 132 -1 O ARG B 131 N GLU B 117 SITE 1 AC1 2 ARG A 80 HOH B 328 SITE 1 AC2 4 HIS A 51 HOH A 328 LEU B 47 HOH B 324 SITE 1 AC3 2 HOH A 331 ARG B 80 SITE 1 AC4 4 LEU A 47 HOH A 322 HIS B 51 HOH B 327 CRYST1 44.931 44.931 284.825 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022256 0.012850 0.000000 0.00000 SCALE2 0.000000 0.025699 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003511 0.00000