data_5DL9 # _entry.id 5DL9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5DL9 WWPDB D_1000213375 # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5DLA _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DL9 _pdbx_database_status.recvd_initial_deposition_date 2015-09-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bednarski, R.' 1 'Cirricione, N.' 2 'Greco, A.' 3 'Hodgson, R.' 4 'Kent, S.' 5 'McGowan, J.' 6 'Notherm, B.' 7 'Patt, M.' 8 'Vue, L.' 9 'Bianchetti, C.M.' 10 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bednarski, R.' 1 primary 'Cirricione, N.' 2 primary 'Greco, A.' 3 primary 'Hodgson, R.' 4 primary 'Kent, S.' 5 primary 'McGowan, J.' 6 primary 'Notherm, B.' 7 primary 'Patt, M.' 8 primary 'Vue, L.' 9 primary 'Bianchetti, C.M.' 10 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5DL9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 79.459 _cell.length_a_esd ? _cell.length_b 79.459 _cell.length_b_esd ? _cell.length_c 37.042 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lysozyme C' 14331.160 1 3.2.1.17 ? ? ? 2 non-polymer syn 'IODIDE ION' 126.904 4 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 9 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 5 water nat water 18.015 98 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C,Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 VAL n 1 3 PHE n 1 4 GLY n 1 5 ARG n 1 6 CYS n 1 7 GLU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 MET n 1 13 LYS n 1 14 ARG n 1 15 HIS n 1 16 GLY n 1 17 LEU n 1 18 ASP n 1 19 ASN n 1 20 TYR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 SER n 1 25 LEU n 1 26 GLY n 1 27 ASN n 1 28 TRP n 1 29 VAL n 1 30 CYS n 1 31 ALA n 1 32 ALA n 1 33 LYS n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 THR n 1 41 GLN n 1 42 ALA n 1 43 THR n 1 44 ASN n 1 45 ARG n 1 46 ASN n 1 47 THR n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 ASP n 1 53 TYR n 1 54 GLY n 1 55 ILE n 1 56 LEU n 1 57 GLN n 1 58 ILE n 1 59 ASN n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 TRP n 1 64 CYS n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 ARG n 1 69 THR n 1 70 PRO n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ILE n 1 79 PRO n 1 80 CYS n 1 81 SER n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 ASN n 1 94 CYS n 1 95 ALA n 1 96 LYS n 1 97 LYS n 1 98 ILE n 1 99 VAL n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 ASN n 1 104 GLY n 1 105 MET n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 ARG n 1 113 ASN n 1 114 ARG n 1 115 CYS n 1 116 LYS n 1 117 GLY n 1 118 THR n 1 119 ASP n 1 120 VAL n 1 121 GLN n 1 122 ALA n 1 123 TRP n 1 124 ILE n 1 125 ARG n 1 126 GLY n 1 127 CYS n 1 128 ARG n 1 129 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 129 _entity_src_gen.gene_src_common_name Chicken _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene LYZ _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Gallus gallus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9031 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5DL9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00698 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DL9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein Solution (60 mg/ml protein in 0.1M Na acetate pH 4.6) mixed in a 1:1 ratio with the Well Solution (10% NaCl buffered in 0.1 M Na acetate pH 4.5). Cryoprotected in 10% NaI, 0.1 M Na acetate pH 4.5 25% ethylene glycol ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-03-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97857 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 11.790 _reflns.entry_id 5DL9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.230 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31941 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.500 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 51.357 _reflns.pdbx_netI_over_sigmaI 12.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 2.388 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.076 _reflns.pdbx_Rpim_I_all 0.020 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 400124 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.230 1.250 ? ? ? ? ? 865 ? 51.600 ? ? ? ? 0.713 ? ? ? ? ? ? ? ? 4.200 ? 0.645 ? ? 0.799 0.348 0 1 1 0.787 ? 1.250 1.270 ? ? ? ? ? 1012 ? 58.800 ? ? ? ? 0.701 ? ? ? ? ? ? ? ? 5.700 ? 0.667 ? ? 0.768 0.302 0 2 1 0.802 ? 1.270 1.300 ? ? ? ? ? 1153 ? 68.200 ? ? ? ? 0.622 ? ? ? ? ? ? ? ? 7.200 ? 0.735 ? ? 0.668 0.235 0 3 1 0.889 ? 1.300 1.320 ? ? ? ? ? 1310 ? 76.200 ? ? ? ? 0.568 ? ? ? ? ? ? ? ? 8.400 ? 0.685 ? ? 0.606 0.200 0 4 1 0.910 ? 1.320 1.350 ? ? ? ? ? 1448 ? 85.300 ? ? ? ? 0.509 ? ? ? ? ? ? ? ? 9.100 ? 0.724 ? ? 0.540 0.172 0 5 1 0.928 ? 1.350 1.390 ? ? ? ? ? 1647 ? 96.500 ? ? ? ? 0.412 ? ? ? ? ? ? ? ? 10.400 ? 0.788 ? ? 0.433 0.130 0 6 1 0.957 ? 1.390 1.420 ? ? ? ? ? 1716 ? 100.000 ? ? ? ? 0.346 ? ? ? ? ? ? ? ? 11.500 ? 0.915 ? ? 0.363 0.105 0 7 1 0.972 ? 1.420 1.460 ? ? ? ? ? 1712 ? 100.000 ? ? ? ? 0.285 ? ? ? ? ? ? ? ? 13.100 ? 1.027 ? ? 0.297 0.081 0 8 1 0.979 ? 1.460 1.500 ? ? ? ? ? 1699 ? 100.000 ? ? ? ? 0.253 ? ? ? ? ? ? ? ? 14.200 ? 1.142 ? ? 0.263 0.069 0 9 1 0.986 ? 1.500 1.550 ? ? ? ? ? 1727 ? 100.000 ? ? ? ? 0.213 ? ? ? ? ? ? ? ? 14.200 ? 1.305 ? ? 0.221 0.058 0 10 1 0.990 ? 1.550 1.610 ? ? ? ? ? 1725 ? 100.000 ? ? ? ? 0.177 ? ? ? ? ? ? ? ? 14.300 ? 1.514 ? ? 0.183 0.048 0 11 1 0.994 ? 1.610 1.670 ? ? ? ? ? 1716 ? 99.900 ? ? ? ? 0.150 ? ? ? ? ? ? ? ? 14.300 ? 1.840 ? ? 0.156 0.041 0 12 1 0.994 ? 1.670 1.750 ? ? ? ? ? 1743 ? 100.000 ? ? ? ? 0.137 ? ? ? ? ? ? ? ? 14.300 ? 2.096 ? ? 0.142 0.037 0 13 1 0.995 ? 1.750 1.840 ? ? ? ? ? 1731 ? 99.900 ? ? ? ? 0.115 ? ? ? ? ? ? ? ? 14.300 ? 2.378 ? ? 0.120 0.031 0 14 1 0.996 ? 1.840 1.950 ? ? ? ? ? 1730 ? 100.000 ? ? ? ? 0.097 ? ? ? ? ? ? ? ? 14.300 ? 2.930 ? ? 0.100 0.026 0 15 1 0.997 ? 1.950 2.100 ? ? ? ? ? 1747 ? 100.000 ? ? ? ? 0.087 ? ? ? ? ? ? ? ? 14.300 ? 3.730 ? ? 0.091 0.024 0 16 1 0.998 ? 2.100 2.310 ? ? ? ? ? 1767 ? 100.000 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 14.300 ? 4.745 ? ? 0.089 0.023 0 17 1 0.997 ? 2.310 2.650 ? ? ? ? ? 1775 ? 100.000 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 14.300 ? 5.273 ? ? 0.085 0.022 0 18 1 0.996 ? 2.650 3.340 ? ? ? ? ? 1798 ? 100.000 ? ? ? ? 0.059 ? ? ? ? ? ? ? ? 14.100 ? 4.353 ? ? 0.061 0.016 0 19 1 0.999 ? 3.340 50.000 ? ? ? ? ? 1920 ? 99.600 ? ? ? ? 0.041 ? ? ? ? ? ? ? ? 13.200 ? 3.221 ? ? 0.043 0.012 0 20 1 0.999 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 57.760 _refine.B_iso_mean 15.2893 _refine.B_iso_min 5.920 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'The data was collected to 1.23A, but the model was refined against data to 1.38A' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DL9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.3800 _refine.ls_d_res_low 33.5730 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24883 _refine.ls_number_reflns_R_free 1561 _refine.ls_number_reflns_R_work 23322 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6600 _refine.ls_percent_reflns_R_free 6.2700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1564 _refine.ls_R_factor_R_free 0.1843 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1545 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 15.2300 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0900 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.3800 _refine_hist.d_res_low 33.5730 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 1143 _refine_hist.pdbx_number_residues_total 129 _refine_hist.pdbx_B_iso_mean_ligand 18.67 _refine_hist.pdbx_B_iso_mean_solvent 25.18 _refine_hist.pdbx_number_atoms_protein 1001 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 1081 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.322 ? 1441 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.065 ? 148 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 188 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.317 ? 391 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.3800 1.4246 2193 . 137 2056 98.0000 . . . 0.1655 . 0.1277 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.4246 1.4755 2199 . 139 2060 99.0000 . . . 0.1755 . 0.1203 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.4755 1.5346 2224 . 140 2084 99.0000 . . . 0.1532 . 0.1130 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.5346 1.6044 2227 . 140 2087 100.0000 . . . 0.1831 . 0.1133 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.6044 1.6890 2248 . 140 2108 100.0000 . . . 0.1611 . 0.1187 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.6890 1.7948 2228 . 139 2089 100.0000 . . . 0.1418 . 0.1252 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.7948 1.9334 2249 . 142 2107 100.0000 . . . 0.1734 . 0.1240 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 1.9334 2.1279 2267 . 142 2125 100.0000 . . . 0.1420 . 0.1334 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.1279 2.4357 2291 . 144 2147 100.0000 . . . 0.1573 . 0.1425 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.4357 3.0685 2310 . 145 2165 100.0000 . . . 0.1988 . 0.1675 . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.0685 33.5830 2447 . 153 2294 100.0000 . . . 0.2292 . 0.1999 . . . . . . 11 . . . # _struct.entry_id 5DL9 _struct.title 'Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students' _struct.pdbx_descriptor 'Lysozyme C (E.C.3.2.1.17)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DL9 _struct_keywords.text 'Hydrolase, Glycoside Hydrolase, Enzyme' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 4 ? P N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 AA2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 AA3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 AA4 PRO A 79 ? SER A 85 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P5 AA5 ILE A 88 ? SER A 100 ? ILE A 88 SER A 100 1 ? 13 HELX_P HELX_P6 AA6 ASN A 103 ? ALA A 107 ? ASN A 103 ALA A 107 5 ? 5 HELX_P HELX_P7 AA7 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P8 AA8 ASP A 119 ? ARG A 125 ? ASP A 119 ARG A 125 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 2.049 ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.105 ? disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.075 ? disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.034 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 43 ? ARG A 45 ? THR A 43 ARG A 45 AA1 2 THR A 51 ? TYR A 53 ? THR A 51 TYR A 53 AA1 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52 AA1 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IOD 201 ? 3 'binding site for residue IOD A 201' AC2 Software A IOD 202 ? 2 'binding site for residue IOD A 202' AC3 Software A IOD 203 ? 1 'binding site for residue IOD A 203' AC4 Software A EDO 205 ? 5 'binding site for residue EDO A 205' AC5 Software A EDO 206 ? 9 'binding site for residue EDO A 206' AC6 Software A EDO 207 ? 10 'binding site for residue EDO A 207' AC7 Software A EDO 208 ? 7 'binding site for residue EDO A 208' AC8 Software A EDO 209 ? 7 'binding site for residue EDO A 209' AC9 Software A EDO 210 ? 9 'binding site for residue EDO A 210' AD1 Software A EDO 211 ? 9 'binding site for residue EDO A 211' AD2 Software A EDO 212 ? 9 'binding site for residue EDO A 212' AD3 Software A EDO 213 ? 9 'binding site for residue EDO A 213' AD4 Software A ACT 214 ? 10 'binding site for residue ACT A 214' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASN A 44 ? ASN A 44 . ? 7_556 ? 2 AC1 3 ARG A 68 ? ARG A 68 . ? 1_555 ? 3 AC1 3 EDO N . ? EDO A 213 . ? 5_545 ? 4 AC2 2 TYR A 23 ? TYR A 23 . ? 4_455 ? 5 AC2 2 ASN A 113 ? ASN A 113 . ? 1_555 ? 6 AC3 1 LYS A 33 ? LYS A 33 . ? 1_555 ? 7 AC4 5 ASN A 27 ? ASN A 27 . ? 1_555 ? 8 AC4 5 ARG A 114 ? ARG A 114 . ? 3_554 ? 9 AC4 5 GLY A 117 ? GLY A 117 . ? 1_555 ? 10 AC4 5 THR A 118 ? THR A 118 . ? 1_555 ? 11 AC4 5 HOH P . ? HOH A 338 . ? 1_555 ? 12 AC5 9 ARG A 21 ? ARG A 21 . ? 4_455 ? 13 AC5 9 GLU A 35 ? GLU A 35 . ? 1_555 ? 14 AC5 9 VAL A 109 ? VAL A 109 . ? 1_555 ? 15 AC5 9 EDO H . ? EDO A 207 . ? 1_555 ? 16 AC5 9 EDO K . ? EDO A 210 . ? 1_555 ? 17 AC5 9 EDO L . ? EDO A 211 . ? 1_555 ? 18 AC5 9 EDO M . ? EDO A 212 . ? 4_455 ? 19 AC5 9 ACT O . ? ACT A 214 . ? 1_555 ? 20 AC5 9 HOH P . ? HOH A 304 . ? 1_555 ? 21 AC6 10 ARG A 21 ? ARG A 21 . ? 4_455 ? 22 AC6 10 GLY A 22 ? GLY A 22 . ? 4_455 ? 23 AC6 10 GLU A 35 ? GLU A 35 . ? 1_555 ? 24 AC6 10 ASN A 44 ? ASN A 44 . ? 1_555 ? 25 AC6 10 GLN A 57 ? GLN A 57 . ? 1_555 ? 26 AC6 10 EDO G . ? EDO A 206 . ? 1_555 ? 27 AC6 10 EDO L . ? EDO A 211 . ? 1_555 ? 28 AC6 10 EDO N . ? EDO A 213 . ? 4_455 ? 29 AC6 10 HOH P . ? HOH A 304 . ? 1_555 ? 30 AC6 10 HOH P . ? HOH A 312 . ? 1_555 ? 31 AC7 7 GLN A 57 ? GLN A 57 . ? 1_555 ? 32 AC7 7 ILE A 58 ? ILE A 58 . ? 1_555 ? 33 AC7 7 ASN A 59 ? ASN A 59 . ? 1_555 ? 34 AC7 7 ALA A 107 ? ALA A 107 . ? 1_555 ? 35 AC7 7 TRP A 108 ? TRP A 108 . ? 1_555 ? 36 AC7 7 HOH P . ? HOH A 319 . ? 1_555 ? 37 AC7 7 HOH P . ? HOH A 320 . ? 1_555 ? 38 AC8 7 ASN A 46 ? ASN A 46 . ? 1_555 ? 39 AC8 7 ASP A 48 ? ASP A 48 . ? 1_555 ? 40 AC8 7 SER A 50 ? SER A 50 . ? 1_555 ? 41 AC8 7 EDO K . ? EDO A 210 . ? 1_555 ? 42 AC8 7 HOH P . ? HOH A 323 . ? 1_555 ? 43 AC8 7 HOH P . ? HOH A 327 . ? 1_555 ? 44 AC8 7 HOH P . ? HOH A 361 . ? 1_555 ? 45 AC9 9 ARG A 21 ? ARG A 21 . ? 4_455 ? 46 AC9 9 ASN A 46 ? ASN A 46 . ? 1_555 ? 47 AC9 9 VAL A 109 ? VAL A 109 . ? 1_555 ? 48 AC9 9 EDO G . ? EDO A 206 . ? 1_555 ? 49 AC9 9 EDO J . ? EDO A 209 . ? 1_555 ? 50 AC9 9 EDO L . ? EDO A 211 . ? 1_555 ? 51 AC9 9 ACT O . ? ACT A 214 . ? 1_555 ? 52 AC9 9 HOH P . ? HOH A 302 . ? 1_555 ? 53 AC9 9 HOH P . ? HOH A 346 . ? 1_555 ? 54 AD1 9 ARG A 21 ? ARG A 21 . ? 4_455 ? 55 AD1 9 ASN A 44 ? ASN A 44 . ? 1_555 ? 56 AD1 9 ASN A 46 ? ASN A 46 . ? 1_555 ? 57 AD1 9 ASP A 52 ? ASP A 52 . ? 1_555 ? 58 AD1 9 EDO G . ? EDO A 206 . ? 1_555 ? 59 AD1 9 EDO H . ? EDO A 207 . ? 1_555 ? 60 AD1 9 EDO K . ? EDO A 210 . ? 1_555 ? 61 AD1 9 HOH P . ? HOH A 302 . ? 1_555 ? 62 AD1 9 HOH P . ? HOH A 312 . ? 1_555 ? 63 AD2 9 ARG A 21 ? ARG A 21 . ? 1_555 ? 64 AD2 9 VAL A 99 ? VAL A 99 . ? 1_555 ? 65 AD2 9 SER A 100 ? SER A 100 . ? 1_555 ? 66 AD2 9 ASP A 101 ? ASP A 101 . ? 1_555 ? 67 AD2 9 GLY A 102 ? GLY A 102 . ? 1_555 ? 68 AD2 9 ASN A 103 ? ASN A 103 . ? 1_555 ? 69 AD2 9 GLY A 104 ? GLY A 104 . ? 1_555 ? 70 AD2 9 VAL A 109 ? VAL A 109 . ? 3_554 ? 71 AD2 9 EDO G . ? EDO A 206 . ? 3_554 ? 72 AD3 9 ASN A 19 ? ASN A 19 . ? 1_555 ? 73 AD3 9 GLY A 22 ? GLY A 22 . ? 1_555 ? 74 AD3 9 PHE A 34 ? PHE A 34 . ? 3_554 ? 75 AD3 9 GLU A 35 ? GLU A 35 . ? 3_554 ? 76 AD3 9 SER A 36 ? SER A 36 . ? 3_554 ? 77 AD3 9 ASN A 37 ? ASN A 37 . ? 3_554 ? 78 AD3 9 IOD B . ? IOD A 201 . ? 5_555 ? 79 AD3 9 EDO H . ? EDO A 207 . ? 3_554 ? 80 AD3 9 HOH P . ? HOH A 303 . ? 1_555 ? 81 AD4 10 GLU A 35 ? GLU A 35 . ? 1_555 ? 82 AD4 10 ASP A 52 ? ASP A 52 . ? 1_555 ? 83 AD4 10 GLN A 57 ? GLN A 57 . ? 1_555 ? 84 AD4 10 ALA A 107 ? ALA A 107 . ? 1_555 ? 85 AD4 10 TRP A 108 ? TRP A 108 . ? 1_555 ? 86 AD4 10 VAL A 109 ? VAL A 109 . ? 1_555 ? 87 AD4 10 ALA A 110 ? ALA A 110 . ? 1_555 ? 88 AD4 10 EDO G . ? EDO A 206 . ? 1_555 ? 89 AD4 10 EDO K . ? EDO A 210 . ? 1_555 ? 90 AD4 10 HOH P . ? HOH A 319 . ? 1_555 ? # _atom_sites.entry_id 5DL9 _atom_sites.fract_transf_matrix[1][1] 0.012585 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012585 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026996 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 201 1 IOD IOD A . C 2 IOD 1 202 2 IOD IOD A . D 2 IOD 1 203 3 IOD IOD A . E 2 IOD 1 204 4 IOD IOD A . F 3 EDO 1 205 1 EDO EDO A . G 3 EDO 1 206 2 EDO EDO A . H 3 EDO 1 207 3 EDO EDO A . I 3 EDO 1 208 4 EDO EDO A . J 3 EDO 1 209 5 EDO EDO A . K 3 EDO 1 210 6 EDO EDO A . L 3 EDO 1 211 7 EDO EDO A . M 3 EDO 1 212 8 EDO EDO A . N 3 EDO 1 213 9 EDO EDO A . O 4 ACT 1 214 1 ACT ACT A . P 5 HOH 1 301 81 HOH HOH A . P 5 HOH 2 302 2 HOH HOH A . P 5 HOH 3 303 28 HOH HOH A . P 5 HOH 4 304 1 HOH HOH A . P 5 HOH 5 305 3 HOH HOH A . P 5 HOH 6 306 55 HOH HOH A . P 5 HOH 7 307 9 HOH HOH A . P 5 HOH 8 308 43 HOH HOH A . P 5 HOH 9 309 102 HOH HOH A . P 5 HOH 10 310 65 HOH HOH A . P 5 HOH 11 311 96 HOH HOH A . P 5 HOH 12 312 18 HOH HOH A . P 5 HOH 13 313 115 HOH HOH A . P 5 HOH 14 314 30 HOH HOH A . P 5 HOH 15 315 19 HOH HOH A . P 5 HOH 16 316 24 HOH HOH A . P 5 HOH 17 317 37 HOH HOH A . P 5 HOH 18 318 5 HOH HOH A . P 5 HOH 19 319 26 HOH HOH A . P 5 HOH 20 320 33 HOH HOH A . P 5 HOH 21 321 27 HOH HOH A . P 5 HOH 22 322 54 HOH HOH A . P 5 HOH 23 323 21 HOH HOH A . P 5 HOH 24 324 93 HOH HOH A . P 5 HOH 25 325 88 HOH HOH A . P 5 HOH 26 326 103 HOH HOH A . P 5 HOH 27 327 45 HOH HOH A . P 5 HOH 28 328 61 HOH HOH A . P 5 HOH 29 329 12 HOH HOH A . P 5 HOH 30 330 40 HOH HOH A . P 5 HOH 31 331 52 HOH HOH A . P 5 HOH 32 332 17 HOH HOH A . P 5 HOH 33 333 50 HOH HOH A . P 5 HOH 34 334 29 HOH HOH A . P 5 HOH 35 335 67 HOH HOH A . P 5 HOH 36 336 49 HOH HOH A . P 5 HOH 37 337 120 HOH HOH A . P 5 HOH 38 338 14 HOH HOH A . P 5 HOH 39 339 83 HOH HOH A . P 5 HOH 40 340 97 HOH HOH A . P 5 HOH 41 341 99 HOH HOH A . P 5 HOH 42 342 13 HOH HOH A . P 5 HOH 43 343 11 HOH HOH A . P 5 HOH 44 344 32 HOH HOH A . P 5 HOH 45 345 71 HOH HOH A . P 5 HOH 46 346 10 HOH HOH A . P 5 HOH 47 347 56 HOH HOH A . P 5 HOH 48 348 124 HOH HOH A . P 5 HOH 49 349 41 HOH HOH A . P 5 HOH 50 350 44 HOH HOH A . P 5 HOH 51 351 79 HOH HOH A . P 5 HOH 52 352 92 HOH HOH A . P 5 HOH 53 353 22 HOH HOH A . P 5 HOH 54 354 62 HOH HOH A . P 5 HOH 55 355 85 HOH HOH A . P 5 HOH 56 356 107 HOH HOH A . P 5 HOH 57 357 31 HOH HOH A . P 5 HOH 58 358 100 HOH HOH A . P 5 HOH 59 359 78 HOH HOH A . P 5 HOH 60 360 112 HOH HOH A . P 5 HOH 61 361 94 HOH HOH A . P 5 HOH 62 362 57 HOH HOH A . P 5 HOH 63 363 58 HOH HOH A . P 5 HOH 64 364 73 HOH HOH A . P 5 HOH 65 365 95 HOH HOH A . P 5 HOH 66 366 38 HOH HOH A . P 5 HOH 67 367 119 HOH HOH A . P 5 HOH 68 368 63 HOH HOH A . P 5 HOH 69 369 89 HOH HOH A . P 5 HOH 70 370 69 HOH HOH A . P 5 HOH 71 371 68 HOH HOH A . P 5 HOH 72 372 105 HOH HOH A . P 5 HOH 73 373 25 HOH HOH A . P 5 HOH 74 374 64 HOH HOH A . P 5 HOH 75 375 39 HOH HOH A . P 5 HOH 76 376 23 HOH HOH A . P 5 HOH 77 377 91 HOH HOH A . P 5 HOH 78 378 98 HOH HOH A . P 5 HOH 79 379 121 HOH HOH A . P 5 HOH 80 380 101 HOH HOH A . P 5 HOH 81 381 82 HOH HOH A . P 5 HOH 82 382 104 HOH HOH A . P 5 HOH 83 383 47 HOH HOH A . P 5 HOH 84 384 127 HOH HOH A . P 5 HOH 85 385 106 HOH HOH A . P 5 HOH 86 386 60 HOH HOH A . P 5 HOH 87 387 114 HOH HOH A . P 5 HOH 88 388 125 HOH HOH A . P 5 HOH 89 389 123 HOH HOH A . P 5 HOH 90 390 126 HOH HOH A . P 5 HOH 91 391 87 HOH HOH A . P 5 HOH 92 392 86 HOH HOH A . P 5 HOH 93 393 110 HOH HOH A . P 5 HOH 94 394 122 HOH HOH A . P 5 HOH 95 395 118 HOH HOH A . P 5 HOH 96 396 72 HOH HOH A . P 5 HOH 97 397 117 HOH HOH A . P 5 HOH 98 398 76 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 352 ? P HOH . 2 1 A HOH 398 ? P HOH . # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-09-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 303 ? ? O A HOH 383 ? ? 2.06 2 1 O A HOH 309 ? ? O A HOH 359 ? ? 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 379 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 387 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_545 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 36 ? ? -140.20 -3.22 2 1 ARG A 68 ? ? -144.74 34.82 3 1 ARG A 68 ? ? -140.41 26.80 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 1,2-ETHANEDIOL EDO 4 'ACETATE ION' ACT 5 water HOH #