data_5DLO # _entry.id 5DLO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DLO pdb_00005dlo 10.2210/pdb5dlo/pdb WWPDB D_1000213402 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-28 2 'Structure model' 1 1 2020-03-25 3 'Structure model' 1 2 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_struct_assembly 2 2 'Structure model' pdbx_struct_assembly_gen 3 2 'Structure model' pdbx_struct_assembly_prop 4 2 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' database_2 8 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 2 2 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 3 2 'Structure model' '_pdbx_struct_assembly_gen.oper_expression' 4 2 'Structure model' '_pdbx_struct_assembly_prop.value' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DLO _pdbx_database_status.recvd_initial_deposition_date 2015-09-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zorzini, V.' 1 'Loris, R.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Substrate recognition, regulation mechanism and activity regulation of MazF mRNA interferase.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zorzini, V.' 1 ? primary 'Loris, R.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endoribonuclease MazF' 14952.206 1 3.1.-.- ? ? ? 2 polymer syn 'DNA substrate analogue AUACAUA' 2077.385 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 195 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Toxin MazF,mRNA interferase MazF' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSQDPIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYK LDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN ; ;MGSSHHHHHHSQDPIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYK LDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN ; A ? 2 polydeoxyribonucleotide no no '(DA)(DU)(DA)(DC)(DA)(DU)(DA)' AUACAUA B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 GLN n 1 13 ASP n 1 14 PRO n 1 15 ILE n 1 16 ARG n 1 17 ARG n 1 18 GLY n 1 19 ASP n 1 20 VAL n 1 21 TYR n 1 22 LEU n 1 23 ALA n 1 24 ASP n 1 25 LEU n 1 26 SER n 1 27 PRO n 1 28 VAL n 1 29 GLN n 1 30 GLY n 1 31 SER n 1 32 GLU n 1 33 GLN n 1 34 GLY n 1 35 GLY n 1 36 VAL n 1 37 ARG n 1 38 PRO n 1 39 VAL n 1 40 VAL n 1 41 ILE n 1 42 ILE n 1 43 GLN n 1 44 ASN n 1 45 ASP n 1 46 THR n 1 47 GLY n 1 48 ASN n 1 49 LYS n 1 50 TYR n 1 51 SER n 1 52 PRO n 1 53 THR n 1 54 VAL n 1 55 ILE n 1 56 VAL n 1 57 ALA n 1 58 ALA n 1 59 ILE n 1 60 THR n 1 61 GLY n 1 62 ARG n 1 63 ILE n 1 64 ASN n 1 65 LYS n 1 66 ALA n 1 67 LYS n 1 68 ILE n 1 69 PRO n 1 70 THR n 1 71 HIS n 1 72 VAL n 1 73 GLU n 1 74 ILE n 1 75 GLU n 1 76 LYS n 1 77 LYS n 1 78 LYS n 1 79 TYR n 1 80 LYS n 1 81 LEU n 1 82 ASP n 1 83 LYS n 1 84 ASP n 1 85 SER n 1 86 VAL n 1 87 ILE n 1 88 LEU n 1 89 LEU n 1 90 GLU n 1 91 GLN n 1 92 ILE n 1 93 ARG n 1 94 THR n 1 95 LEU n 1 96 ASP n 1 97 LYS n 1 98 LYS n 1 99 ARG n 1 100 LEU n 1 101 LYS n 1 102 GLU n 1 103 LYS n 1 104 LEU n 1 105 THR n 1 106 TYR n 1 107 LEU n 1 108 SER n 1 109 ASP n 1 110 ASP n 1 111 LYS n 1 112 MET n 1 113 LYS n 1 114 GLU n 1 115 VAL n 1 116 ASP n 1 117 ASN n 1 118 ALA n 1 119 LEU n 1 120 MET n 1 121 ILE n 1 122 SER n 1 123 LEU n 1 124 GLY n 1 125 LEU n 1 126 ASN n 1 127 ALA n 1 128 VAL n 1 129 ALA n 1 130 HIS n 1 131 GLN n 1 132 LYS n 1 133 ASN n 2 1 DA n 2 2 DU n 2 3 DA n 2 4 DC n 2 5 DA n 2 6 DU n 2 7 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 133 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mazF, SAHV_2053' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'Enterobacterio phage MS2' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 12022 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DU 'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P' 308.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -12 ? ? ? A . n A 1 2 GLY 2 -11 ? ? ? A . n A 1 3 SER 3 -10 ? ? ? A . n A 1 4 SER 4 -9 ? ? ? A . n A 1 5 HIS 5 -8 ? ? ? A . n A 1 6 HIS 6 -7 ? ? ? A . n A 1 7 HIS 7 -6 ? ? ? A . n A 1 8 HIS 8 -5 ? ? ? A . n A 1 9 HIS 9 -4 ? ? ? A . n A 1 10 HIS 10 -3 ? ? ? A . n A 1 11 SER 11 -2 ? ? ? A . n A 1 12 GLN 12 -1 ? ? ? A . n A 1 13 ASP 13 0 0 ASP ASP A . n A 1 14 PRO 14 1 1 PRO PRO A . n A 1 15 ILE 15 2 2 ILE ILE A . n A 1 16 ARG 16 3 3 ARG ARG A . n A 1 17 ARG 17 4 4 ARG ARG A . n A 1 18 GLY 18 5 5 GLY GLY A . n A 1 19 ASP 19 6 6 ASP ASP A . n A 1 20 VAL 20 7 7 VAL VAL A . n A 1 21 TYR 21 8 8 TYR TYR A . n A 1 22 LEU 22 9 9 LEU LEU A . n A 1 23 ALA 23 10 10 ALA ALA A . n A 1 24 ASP 24 11 11 ASP ASP A . n A 1 25 LEU 25 12 12 LEU LEU A . n A 1 26 SER 26 13 13 SER SER A . n A 1 27 PRO 27 14 14 PRO PRO A . n A 1 28 VAL 28 15 15 VAL VAL A . n A 1 29 GLN 29 16 16 GLN GLN A . n A 1 30 GLY 30 17 17 GLY GLY A . n A 1 31 SER 31 18 18 SER SER A . n A 1 32 GLU 32 19 19 GLU GLU A . n A 1 33 GLN 33 20 20 GLN GLN A . n A 1 34 GLY 34 21 21 GLY GLY A . n A 1 35 GLY 35 22 22 GLY GLY A . n A 1 36 VAL 36 23 23 VAL VAL A . n A 1 37 ARG 37 24 24 ARG ARG A . n A 1 38 PRO 38 25 25 PRO PRO A . n A 1 39 VAL 39 26 26 VAL VAL A . n A 1 40 VAL 40 27 27 VAL VAL A . n A 1 41 ILE 41 28 28 ILE ILE A . n A 1 42 ILE 42 29 29 ILE ILE A . n A 1 43 GLN 43 30 30 GLN GLN A . n A 1 44 ASN 44 31 31 ASN ASN A . n A 1 45 ASP 45 32 32 ASP ASP A . n A 1 46 THR 46 33 33 THR THR A . n A 1 47 GLY 47 34 34 GLY GLY A . n A 1 48 ASN 48 35 35 ASN ASN A . n A 1 49 LYS 49 36 36 LYS LYS A . n A 1 50 TYR 50 37 37 TYR TYR A . n A 1 51 SER 51 38 38 SER SER A . n A 1 52 PRO 52 39 39 PRO PRO A . n A 1 53 THR 53 40 40 THR THR A . n A 1 54 VAL 54 41 41 VAL VAL A . n A 1 55 ILE 55 42 42 ILE ILE A . n A 1 56 VAL 56 43 43 VAL VAL A . n A 1 57 ALA 57 44 44 ALA ALA A . n A 1 58 ALA 58 45 45 ALA ALA A . n A 1 59 ILE 59 46 46 ILE ILE A . n A 1 60 THR 60 47 47 THR THR A . n A 1 61 GLY 61 48 48 GLY GLY A . n A 1 62 ARG 62 49 49 ARG ARG A . n A 1 63 ILE 63 50 50 ILE ILE A . n A 1 64 ASN 64 51 51 ASN ASN A . n A 1 65 LYS 65 52 52 LYS LYS A . n A 1 66 ALA 66 53 53 ALA ALA A . n A 1 67 LYS 67 54 54 LYS LYS A . n A 1 68 ILE 68 55 55 ILE ILE A . n A 1 69 PRO 69 56 56 PRO PRO A . n A 1 70 THR 70 57 57 THR THR A . n A 1 71 HIS 71 58 58 HIS HIS A . n A 1 72 VAL 72 59 59 VAL VAL A . n A 1 73 GLU 73 60 60 GLU GLU A . n A 1 74 ILE 74 61 61 ILE ILE A . n A 1 75 GLU 75 62 62 GLU GLU A . n A 1 76 LYS 76 63 63 LYS LYS A . n A 1 77 LYS 77 64 64 LYS LYS A . n A 1 78 LYS 78 65 65 LYS LYS A . n A 1 79 TYR 79 66 66 TYR TYR A . n A 1 80 LYS 80 67 67 LYS LYS A . n A 1 81 LEU 81 68 68 LEU LEU A . n A 1 82 ASP 82 69 69 ASP ASP A . n A 1 83 LYS 83 70 70 LYS LYS A . n A 1 84 ASP 84 71 71 ASP ASP A . n A 1 85 SER 85 72 72 SER SER A . n A 1 86 VAL 86 73 73 VAL VAL A . n A 1 87 ILE 87 74 74 ILE ILE A . n A 1 88 LEU 88 75 75 LEU LEU A . n A 1 89 LEU 89 76 76 LEU LEU A . n A 1 90 GLU 90 77 77 GLU GLU A . n A 1 91 GLN 91 78 78 GLN GLN A . n A 1 92 ILE 92 79 79 ILE ILE A . n A 1 93 ARG 93 80 80 ARG ARG A . n A 1 94 THR 94 81 81 THR THR A . n A 1 95 LEU 95 82 82 LEU LEU A . n A 1 96 ASP 96 83 83 ASP ASP A . n A 1 97 LYS 97 84 84 LYS LYS A . n A 1 98 LYS 98 85 85 LYS LYS A . n A 1 99 ARG 99 86 86 ARG ARG A . n A 1 100 LEU 100 87 87 LEU LEU A . n A 1 101 LYS 101 88 88 LYS LYS A . n A 1 102 GLU 102 89 89 GLU GLU A . n A 1 103 LYS 103 90 90 LYS LYS A . n A 1 104 LEU 104 91 91 LEU LEU A . n A 1 105 THR 105 92 92 THR THR A . n A 1 106 TYR 106 93 93 TYR TYR A . n A 1 107 LEU 107 94 94 LEU LEU A . n A 1 108 SER 108 95 95 SER SER A . n A 1 109 ASP 109 96 96 ASP ASP A . n A 1 110 ASP 110 97 97 ASP ASP A . n A 1 111 LYS 111 98 98 LYS LYS A . n A 1 112 MET 112 99 99 MET MET A . n A 1 113 LYS 113 100 100 LYS LYS A . n A 1 114 GLU 114 101 101 GLU GLU A . n A 1 115 VAL 115 102 102 VAL VAL A . n A 1 116 ASP 116 103 103 ASP ASP A . n A 1 117 ASN 117 104 104 ASN ASN A . n A 1 118 ALA 118 105 105 ALA ALA A . n A 1 119 LEU 119 106 106 LEU LEU A . n A 1 120 MET 120 107 107 MET MET A . n A 1 121 ILE 121 108 108 ILE ILE A . n A 1 122 SER 122 109 109 SER SER A . n A 1 123 LEU 123 110 110 LEU LEU A . n A 1 124 GLY 124 111 111 GLY GLY A . n A 1 125 LEU 125 112 112 LEU LEU A . n A 1 126 ASN 126 113 113 ASN ASN A . n A 1 127 ALA 127 114 114 ALA ALA A . n A 1 128 VAL 128 115 ? ? ? A . n A 1 129 ALA 129 116 ? ? ? A . n A 1 130 HIS 130 117 ? ? ? A . n A 1 131 GLN 131 118 ? ? ? A . n A 1 132 LYS 132 119 ? ? ? A . n A 1 133 ASN 133 120 ? ? ? A . n B 2 1 DA 1 2 2 DA Ad B . n B 2 2 DU 2 3 3 DU Ud B . n B 2 3 DA 3 4 4 DA Ad B . n B 2 4 DC 4 5 5 DC Cd B . n B 2 5 DA 5 6 6 DA Ad B . n B 2 6 DU 6 7 7 DU Ud B . n B 2 7 DA 7 8 8 DA Ad B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 201 1 CL CL A . D 4 HOH 1 301 69 HOH HOH A . D 4 HOH 2 302 63 HOH HOH A . D 4 HOH 3 303 183 HOH HOH A . D 4 HOH 4 304 233 HOH HOH A . D 4 HOH 5 305 113 HOH HOH A . D 4 HOH 6 306 214 HOH HOH A . D 4 HOH 7 307 122 HOH HOH A . D 4 HOH 8 308 198 HOH HOH A . D 4 HOH 9 309 217 HOH HOH A . D 4 HOH 10 310 8 HOH HOH A . D 4 HOH 11 311 65 HOH HOH A . D 4 HOH 12 312 15 HOH HOH A . D 4 HOH 13 313 258 HOH HOH A . D 4 HOH 14 314 114 HOH HOH A . D 4 HOH 15 315 68 HOH HOH A . D 4 HOH 16 316 61 HOH HOH A . D 4 HOH 17 317 145 HOH HOH A . D 4 HOH 18 318 168 HOH HOH A . D 4 HOH 19 319 119 HOH HOH A . D 4 HOH 20 320 34 HOH HOH A . D 4 HOH 21 321 100 HOH HOH A . D 4 HOH 22 322 191 HOH HOH A . D 4 HOH 23 323 4 HOH HOH A . D 4 HOH 24 324 32 HOH HOH A . D 4 HOH 25 325 52 HOH HOH A . D 4 HOH 26 326 70 HOH HOH A . D 4 HOH 27 327 5 HOH HOH A . D 4 HOH 28 328 224 HOH HOH A . D 4 HOH 29 329 64 HOH HOH A . D 4 HOH 30 330 98 HOH HOH A . D 4 HOH 31 331 18 HOH HOH A . D 4 HOH 32 332 28 HOH HOH A . D 4 HOH 33 333 25 HOH HOH A . D 4 HOH 34 334 31 HOH HOH A . D 4 HOH 35 335 59 HOH HOH A . D 4 HOH 36 336 21 HOH HOH A . D 4 HOH 37 337 24 HOH HOH A . D 4 HOH 38 338 6 HOH HOH A . D 4 HOH 39 339 47 HOH HOH A . D 4 HOH 40 340 111 HOH HOH A . D 4 HOH 41 341 87 HOH HOH A . D 4 HOH 42 342 125 HOH HOH A . D 4 HOH 43 343 53 HOH HOH A . D 4 HOH 44 344 1 HOH HOH A . D 4 HOH 45 345 247 HOH HOH A . D 4 HOH 46 346 14 HOH HOH A . D 4 HOH 47 347 44 HOH HOH A . D 4 HOH 48 348 88 HOH HOH A . D 4 HOH 49 349 9 HOH HOH A . D 4 HOH 50 350 189 HOH HOH A . D 4 HOH 51 351 135 HOH HOH A . D 4 HOH 52 352 257 HOH HOH A . D 4 HOH 53 353 29 HOH HOH A . D 4 HOH 54 354 67 HOH HOH A . D 4 HOH 55 355 167 HOH HOH A . D 4 HOH 56 356 33 HOH HOH A . D 4 HOH 57 357 40 HOH HOH A . D 4 HOH 58 358 260 HOH HOH A . D 4 HOH 59 359 2 HOH HOH A . D 4 HOH 60 360 150 HOH HOH A . D 4 HOH 61 361 66 HOH HOH A . D 4 HOH 62 362 97 HOH HOH A . D 4 HOH 63 363 19 HOH HOH A . D 4 HOH 64 364 27 HOH HOH A . D 4 HOH 65 365 10 HOH HOH A . D 4 HOH 66 366 137 HOH HOH A . D 4 HOH 67 367 57 HOH HOH A . D 4 HOH 68 368 71 HOH HOH A . D 4 HOH 69 369 80 HOH HOH A . D 4 HOH 70 370 11 HOH HOH A . D 4 HOH 71 371 161 HOH HOH A . D 4 HOH 72 372 20 HOH HOH A . D 4 HOH 73 373 244 HOH HOH A . D 4 HOH 74 374 210 HOH HOH A . D 4 HOH 75 375 132 HOH HOH A . D 4 HOH 76 376 56 HOH HOH A . D 4 HOH 77 377 238 HOH HOH A . D 4 HOH 78 378 38 HOH HOH A . D 4 HOH 79 379 72 HOH HOH A . D 4 HOH 80 380 124 HOH HOH A . D 4 HOH 81 381 81 HOH HOH A . D 4 HOH 82 382 235 HOH HOH A . D 4 HOH 83 383 48 HOH HOH A . D 4 HOH 84 384 239 HOH HOH A . D 4 HOH 85 385 43 HOH HOH A . D 4 HOH 86 386 155 HOH HOH A . D 4 HOH 87 387 128 HOH HOH A . D 4 HOH 88 388 36 HOH HOH A . D 4 HOH 89 389 149 HOH HOH A . D 4 HOH 90 390 107 HOH HOH A . D 4 HOH 91 391 218 HOH HOH A . D 4 HOH 92 392 92 HOH HOH A . D 4 HOH 93 393 99 HOH HOH A . D 4 HOH 94 394 144 HOH HOH A . D 4 HOH 95 395 195 HOH HOH A . D 4 HOH 96 396 232 HOH HOH A . D 4 HOH 97 397 62 HOH HOH A . D 4 HOH 98 398 186 HOH HOH A . D 4 HOH 99 399 187 HOH HOH A . D 4 HOH 100 400 185 HOH HOH A . D 4 HOH 101 401 215 HOH HOH A . D 4 HOH 102 402 85 HOH HOH A . D 4 HOH 103 403 105 HOH HOH A . D 4 HOH 104 404 196 HOH HOH A . D 4 HOH 105 405 121 HOH HOH A . D 4 HOH 106 406 202 HOH HOH A . D 4 HOH 107 407 188 HOH HOH A . D 4 HOH 108 408 190 HOH HOH A . D 4 HOH 109 409 169 HOH HOH A . D 4 HOH 110 410 182 HOH HOH A . D 4 HOH 111 411 30 HOH HOH A . D 4 HOH 112 412 242 HOH HOH A . D 4 HOH 113 413 216 HOH HOH A . D 4 HOH 114 414 109 HOH HOH A . D 4 HOH 115 415 192 HOH HOH A . D 4 HOH 116 416 199 HOH HOH A . D 4 HOH 117 417 220 HOH HOH A . D 4 HOH 118 418 104 HOH HOH A . D 4 HOH 119 419 82 HOH HOH A . D 4 HOH 120 420 250 HOH HOH A . D 4 HOH 121 421 89 HOH HOH A . D 4 HOH 122 422 241 HOH HOH A . D 4 HOH 123 423 243 HOH HOH A . D 4 HOH 124 424 213 HOH HOH A . D 4 HOH 125 425 251 HOH HOH A . D 4 HOH 126 426 55 HOH HOH A . D 4 HOH 127 427 84 HOH HOH A . D 4 HOH 128 428 184 HOH HOH A . D 4 HOH 129 429 131 HOH HOH A . D 4 HOH 130 430 254 HOH HOH A . D 4 HOH 131 431 253 HOH HOH A . D 4 HOH 132 432 207 HOH HOH A . D 4 HOH 133 433 181 HOH HOH A . D 4 HOH 134 434 245 HOH HOH A . D 4 HOH 135 435 106 HOH HOH A . D 4 HOH 136 436 223 HOH HOH A . D 4 HOH 137 437 252 HOH HOH A . D 4 HOH 138 438 160 HOH HOH A . D 4 HOH 139 439 143 HOH HOH A . D 4 HOH 140 440 180 HOH HOH A . D 4 HOH 141 441 201 HOH HOH A . D 4 HOH 142 442 200 HOH HOH A . D 4 HOH 143 443 146 HOH HOH A . D 4 HOH 144 444 93 HOH HOH A . D 4 HOH 145 445 151 HOH HOH A . D 4 HOH 146 446 175 HOH HOH A . D 4 HOH 147 447 221 HOH HOH A . D 4 HOH 148 448 240 HOH HOH A . D 4 HOH 149 449 255 HOH HOH A . D 4 HOH 150 450 246 HOH HOH A . D 4 HOH 151 451 154 HOH HOH A . D 4 HOH 152 452 256 HOH HOH A . E 4 HOH 1 101 194 HOH HOH B . E 4 HOH 2 102 17 HOH HOH B . E 4 HOH 3 103 12 HOH HOH B . E 4 HOH 4 104 16 HOH HOH B . E 4 HOH 5 105 58 HOH HOH B . E 4 HOH 6 106 13 HOH HOH B . E 4 HOH 7 107 22 HOH HOH B . E 4 HOH 8 108 79 HOH HOH B . E 4 HOH 9 109 101 HOH HOH B . E 4 HOH 10 110 49 HOH HOH B . E 4 HOH 11 111 23 HOH HOH B . E 4 HOH 12 112 259 HOH HOH B . E 4 HOH 13 113 230 HOH HOH B . E 4 HOH 14 114 129 HOH HOH B . E 4 HOH 15 115 73 HOH HOH B . E 4 HOH 16 116 171 HOH HOH B . E 4 HOH 17 117 7 HOH HOH B . E 4 HOH 18 118 219 HOH HOH B . E 4 HOH 19 119 76 HOH HOH B . E 4 HOH 20 120 46 HOH HOH B . E 4 HOH 21 121 205 HOH HOH B . E 4 HOH 22 122 127 HOH HOH B . E 4 HOH 23 123 123 HOH HOH B . E 4 HOH 24 124 236 HOH HOH B . E 4 HOH 25 125 126 HOH HOH B . E 4 HOH 26 126 229 HOH HOH B . E 4 HOH 27 127 237 HOH HOH B . E 4 HOH 28 128 228 HOH HOH B . E 4 HOH 29 129 227 HOH HOH B . E 4 HOH 30 130 102 HOH HOH B . E 4 HOH 31 131 225 HOH HOH B . E 4 HOH 32 132 141 HOH HOH B . E 4 HOH 33 133 226 HOH HOH B . E 4 HOH 34 134 130 HOH HOH B . E 4 HOH 35 135 193 HOH HOH B . E 4 HOH 36 136 206 HOH HOH B . E 4 HOH 37 137 231 HOH HOH B . E 4 HOH 38 138 222 HOH HOH B . E 4 HOH 39 139 77 HOH HOH B . E 4 HOH 40 140 234 HOH HOH B . E 4 HOH 41 141 248 HOH HOH B . E 4 HOH 42 142 249 HOH HOH B . E 4 HOH 43 143 118 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 0 ? N ? A ASP 13 N 2 1 Y 1 A ASP 0 ? CA ? A ASP 13 CA 3 1 Y 1 A ASP 0 ? CB ? A ASP 13 CB 4 1 Y 1 A ASP 0 ? CG ? A ASP 13 CG 5 1 Y 1 A ASP 0 ? OD1 ? A ASP 13 OD1 6 1 Y 1 A ASP 0 ? OD2 ? A ASP 13 OD2 7 1 Y 1 A ARG 3 ? NE ? A ARG 16 NE 8 1 Y 1 A ARG 3 ? CZ ? A ARG 16 CZ 9 1 Y 1 A ARG 3 ? NH1 ? A ARG 16 NH1 10 1 Y 1 A ARG 3 ? NH2 ? A ARG 16 NH2 11 1 Y 1 A ILE 50 ? CG1 ? A ILE 63 CG1 12 1 Y 1 A ILE 50 ? CG2 ? A ILE 63 CG2 13 1 Y 1 A ILE 50 ? CD1 ? A ILE 63 CD1 14 1 Y 1 A ASN 51 ? CG ? A ASN 64 CG 15 1 Y 1 A ASN 51 ? OD1 ? A ASN 64 OD1 16 1 Y 1 A ASN 51 ? ND2 ? A ASN 64 ND2 17 1 Y 1 A LYS 54 ? CG ? A LYS 67 CG 18 1 Y 1 A LYS 54 ? CD ? A LYS 67 CD 19 1 Y 1 A LYS 54 ? CE ? A LYS 67 CE 20 1 Y 1 A LYS 54 ? NZ ? A LYS 67 NZ 21 1 Y 1 A GLU 62 ? CD ? A GLU 75 CD 22 1 Y 1 A GLU 62 ? OE1 ? A GLU 75 OE1 23 1 Y 1 A GLU 62 ? OE2 ? A GLU 75 OE2 24 1 Y 1 A LYS 64 ? CG ? A LYS 77 CG 25 1 Y 1 A LYS 64 ? CD ? A LYS 77 CD 26 1 Y 1 A LYS 64 ? CE ? A LYS 77 CE 27 1 Y 1 A LYS 64 ? NZ ? A LYS 77 NZ 28 1 Y 1 A LYS 67 ? CG ? A LYS 80 CG 29 1 Y 1 A LYS 67 ? CD ? A LYS 80 CD 30 1 Y 1 A LYS 67 ? CE ? A LYS 80 CE 31 1 Y 1 A LYS 67 ? NZ ? A LYS 80 NZ 32 1 Y 1 A LYS 85 ? NZ ? A LYS 98 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.7.1_743 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5DLO _cell.details ? _cell.formula_units_Z ? _cell.length_a 63.600 _cell.length_a_esd ? _cell.length_b 63.600 _cell.length_b_esd ? _cell.length_c 69.760 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DLO _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '75 mM Tris pH 8.5, 18.75% v/v tert-Butanol, 25% Glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-11-15 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9801 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9801 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 2' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DLO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.40 _reflns.d_resolution_low 31.8 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31425 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.64 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.49 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.03 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.0848 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -1.0848 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 2.1695 _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DLO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.401 _refine.ls_d_res_low 31.800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31425 _refine.ls_number_reflns_R_free 1571 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.79 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1344 _refine.ls_R_factor_R_free 0.1634 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1329 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol 58.992 _refine.solvent_model_param_ksol 0.416 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4MZM _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.30 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.06 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 14.12 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.37 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 869 _refine_hist.pdbx_number_atoms_nucleic_acid 138 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 195 _refine_hist.number_atoms_total 1203 _refine_hist.d_res_high 1.401 _refine_hist.d_res_low 31.800 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 ? 1045 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.253 ? 1441 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.227 ? 417 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.098 ? 174 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 160 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4009 1.4461 . . 141 2665 98.00 . . . 0.3710 . 0.3120 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4461 1.4978 . . 142 2702 100.00 . . . 0.2441 . 0.2190 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4978 1.5578 . . 141 2704 100.00 . . . 0.2025 . 0.1672 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5578 1.6287 . . 144 2726 100.00 . . . 0.1830 . 0.1413 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6287 1.7146 . . 142 2706 100.00 . . . 0.1753 . 0.1208 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7146 1.8220 . . 142 2701 100.00 . . . 0.1513 . 0.1069 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8220 1.9626 . . 143 2713 100.00 . . . 0.1360 . 0.1016 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9626 2.1601 . . 143 2728 100.00 . . . 0.1438 . 0.1181 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1601 2.4726 . . 144 2721 100.00 . . . 0.1579 . 0.1187 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4726 3.1147 . . 143 2731 100.00 . . . 0.1669 . 0.1340 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1147 31.8082 . . 146 2757 99.00 . . . 0.1472 . 0.1311 . . . . . . . . . . # _struct.entry_id 5DLO _struct.title 'S. aureus MazF in complex with substrate analogue' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DLO _struct_keywords.text 'Toxin-Antitoxin, mRNA interferase, ribonuclease, persistence, bacterial stress response, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MAZF_STAA1 A7X4P5 ? 1 ;IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRT LDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN ; 2 2 PDB 5DLO 5DLO ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DLO A 15 ? 133 ? A7X4P5 2 ? 120 ? 2 120 2 2 5DLO B 1 ? 7 ? 5DLO 2 ? 8 ? 2 8 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DLO MET A 1 ? UNP A7X4P5 ? ? 'initiating methionine' -12 1 1 5DLO GLY A 2 ? UNP A7X4P5 ? ? 'expression tag' -11 2 1 5DLO SER A 3 ? UNP A7X4P5 ? ? 'expression tag' -10 3 1 5DLO SER A 4 ? UNP A7X4P5 ? ? 'expression tag' -9 4 1 5DLO HIS A 5 ? UNP A7X4P5 ? ? 'expression tag' -8 5 1 5DLO HIS A 6 ? UNP A7X4P5 ? ? 'expression tag' -7 6 1 5DLO HIS A 7 ? UNP A7X4P5 ? ? 'expression tag' -6 7 1 5DLO HIS A 8 ? UNP A7X4P5 ? ? 'expression tag' -5 8 1 5DLO HIS A 9 ? UNP A7X4P5 ? ? 'expression tag' -4 9 1 5DLO HIS A 10 ? UNP A7X4P5 ? ? 'expression tag' -3 10 1 5DLO SER A 11 ? UNP A7X4P5 ? ? 'expression tag' -2 11 1 5DLO GLN A 12 ? UNP A7X4P5 ? ? 'expression tag' -1 12 1 5DLO ASP A 13 ? UNP A7X4P5 ? ? 'expression tag' 0 13 1 5DLO PRO A 14 ? UNP A7X4P5 ? ? 'expression tag' 1 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7060 ? 1 MORE -24 ? 1 'SSA (A^2)' 10610 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_445 -x-1,-y-1,z -1.0000000000 0.0000000000 0.0000000000 -31.8000000000 0.0000000000 -1.0000000000 0.0000000000 -55.0792156807 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 44 ? SER A 51 ? ASN A 31 SER A 38 1 ? 8 HELX_P HELX_P2 AA2 SER A 108 ? LEU A 123 ? SER A 95 LEU A 110 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 26 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 13 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 27 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 14 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.03 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 71 ? ILE A 74 ? HIS A 58 ILE A 61 AA1 2 SER A 85 ? ASP A 96 ? SER A 72 ASP A 83 AA1 3 THR A 53 ? THR A 60 ? THR A 40 THR A 47 AA1 4 VAL A 36 ? ILE A 41 ? VAL A 23 ILE A 28 AA1 5 ASP A 19 ? ASP A 24 ? ASP A 6 ASP A 11 AA1 6 LEU A 100 ? TYR A 106 ? LEU A 87 TYR A 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 72 ? N VAL A 59 O ILE A 87 ? O ILE A 74 AA1 2 3 O LEU A 88 ? O LEU A 75 N ALA A 58 ? N ALA A 45 AA1 3 4 O ALA A 57 ? O ALA A 44 N VAL A 40 ? N VAL A 27 AA1 4 5 O ILE A 41 ? O ILE A 28 N ASP A 19 ? N ASP A 6 AA1 5 6 N LEU A 22 ? N LEU A 9 O LYS A 101 ? O LYS A 88 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CL _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'binding site for residue CL A 201' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id GLY _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 30 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id GLY _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 17 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 117 ? ? O B HOH 138 ? ? 1.93 2 1 O A HOH 441 ? ? O A HOH 447 ? ? 1.98 3 1 O A HOH 325 ? ? O A HOH 341 ? ? 2.02 4 1 O A HOH 309 ? ? O A HOH 413 ? ? 2.09 5 1 O B HOH 128 ? ? O B HOH 129 ? ? 2.13 6 1 O A HOH 441 ? ? O A HOH 442 ? ? 2.14 7 1 O A HOH 340 ? ? O A HOH 380 ? ? 2.14 8 1 O A HOH 388 ? ? O B HOH 134 ? ? 2.15 9 1 ND2 A ASN 104 ? A O A HOH 301 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 337 ? ? 1_555 O A HOH 355 ? ? 2_445 1.68 2 1 O B HOH 104 ? ? 1_555 O B HOH 138 ? ? 5_555 1.94 3 1 O A HOH 395 ? ? 1_555 O A HOH 432 ? ? 6_554 1.97 4 1 NE2 A GLN 16 ? ? 1_555 O A HOH 360 ? ? 4_445 1.98 5 1 O A HOH 396 ? ? 1_555 O A HOH 449 ? ? 3_544 2.00 6 1 O A HOH 303 ? ? 1_555 O B HOH 140 ? ? 4_445 2.01 7 1 O A HOH 432 ? ? 1_555 O B HOH 101 ? ? 5_555 2.01 8 1 O A HOH 301 ? ? 1_555 O B HOH 141 ? ? 5_555 2.03 9 1 O A HOH 403 ? ? 1_555 O A HOH 415 ? ? 5_555 2.10 10 1 O A HOH 384 ? ? 1_555 O A HOH 452 ? ? 6_554 2.11 11 1 O A HOH 437 ? ? 1_555 O A HOH 450 ? ? 4_445 2.17 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DU 3 ? ? "C1'" B DU 3 ? ? "C2'" B DU 3 ? ? 111.11 106.80 4.31 0.50 N 2 1 "O4'" B DU 3 ? ? "C1'" B DU 3 ? ? N1 B DU 3 ? ? 112.08 108.30 3.78 0.30 N 3 1 "O4'" B DU 7 ? ? "C1'" B DU 7 ? ? N1 B DU 7 ? ? 111.05 108.30 2.75 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 88 ? ? -102.84 -129.29 2 1 THR A 92 ? ? -170.62 -171.82 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 443 ? 5.83 . 2 1 O ? A HOH 444 ? 6.03 . 3 1 O ? A HOH 445 ? 6.34 . 4 1 O ? A HOH 446 ? 6.38 . 5 1 O ? A HOH 447 ? 6.64 . 6 1 O ? A HOH 448 ? 6.71 . 7 1 O ? A HOH 449 ? 6.72 . 8 1 O ? A HOH 450 ? 7.23 . 9 1 O ? A HOH 451 ? 7.48 . 10 1 O ? A HOH 452 ? 8.20 . 11 1 O ? B HOH 142 ? 6.31 . 12 1 O ? B HOH 143 ? 6.87 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -12 ? A MET 1 2 1 Y 1 A GLY -11 ? A GLY 2 3 1 Y 1 A SER -10 ? A SER 3 4 1 Y 1 A SER -9 ? A SER 4 5 1 Y 1 A HIS -8 ? A HIS 5 6 1 Y 1 A HIS -7 ? A HIS 6 7 1 Y 1 A HIS -6 ? A HIS 7 8 1 Y 1 A HIS -5 ? A HIS 8 9 1 Y 1 A HIS -4 ? A HIS 9 10 1 Y 1 A HIS -3 ? A HIS 10 11 1 Y 1 A SER -2 ? A SER 11 12 1 Y 1 A GLN -1 ? A GLN 12 13 1 Y 1 A VAL 115 ? A VAL 128 14 1 Y 1 A ALA 116 ? A ALA 129 15 1 Y 1 A HIS 117 ? A HIS 130 16 1 Y 1 A GLN 118 ? A GLN 131 17 1 Y 1 A LYS 119 ? A LYS 132 18 1 Y 1 A ASN 120 ? A ASN 133 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 DA OP3 O N N 75 DA P P N N 76 DA OP1 O N N 77 DA OP2 O N N 78 DA "O5'" O N N 79 DA "C5'" C N N 80 DA "C4'" C N R 81 DA "O4'" O N N 82 DA "C3'" C N S 83 DA "O3'" O N N 84 DA "C2'" C N N 85 DA "C1'" C N R 86 DA N9 N Y N 87 DA C8 C Y N 88 DA N7 N Y N 89 DA C5 C Y N 90 DA C6 C Y N 91 DA N6 N N N 92 DA N1 N Y N 93 DA C2 C Y N 94 DA N3 N Y N 95 DA C4 C Y N 96 DA HOP3 H N N 97 DA HOP2 H N N 98 DA "H5'" H N N 99 DA "H5''" H N N 100 DA "H4'" H N N 101 DA "H3'" H N N 102 DA "HO3'" H N N 103 DA "H2'" H N N 104 DA "H2''" H N N 105 DA "H1'" H N N 106 DA H8 H N N 107 DA H61 H N N 108 DA H62 H N N 109 DA H2 H N N 110 DC OP3 O N N 111 DC P P N N 112 DC OP1 O N N 113 DC OP2 O N N 114 DC "O5'" O N N 115 DC "C5'" C N N 116 DC "C4'" C N R 117 DC "O4'" O N N 118 DC "C3'" C N S 119 DC "O3'" O N N 120 DC "C2'" C N N 121 DC "C1'" C N R 122 DC N1 N N N 123 DC C2 C N N 124 DC O2 O N N 125 DC N3 N N N 126 DC C4 C N N 127 DC N4 N N N 128 DC C5 C N N 129 DC C6 C N N 130 DC HOP3 H N N 131 DC HOP2 H N N 132 DC "H5'" H N N 133 DC "H5''" H N N 134 DC "H4'" H N N 135 DC "H3'" H N N 136 DC "HO3'" H N N 137 DC "H2'" H N N 138 DC "H2''" H N N 139 DC "H1'" H N N 140 DC H41 H N N 141 DC H42 H N N 142 DC H5 H N N 143 DC H6 H N N 144 DU OP3 O N N 145 DU P P N N 146 DU OP1 O N N 147 DU OP2 O N N 148 DU "O5'" O N N 149 DU "C5'" C N N 150 DU "C4'" C N R 151 DU "O4'" O N N 152 DU "C3'" C N S 153 DU "O3'" O N N 154 DU "C2'" C N N 155 DU "C1'" C N R 156 DU N1 N N N 157 DU C2 C N N 158 DU O2 O N N 159 DU N3 N N N 160 DU C4 C N N 161 DU O4 O N N 162 DU C5 C N N 163 DU C6 C N N 164 DU HOP3 H N N 165 DU HOP2 H N N 166 DU "H5'" H N N 167 DU "H5''" H N N 168 DU "H4'" H N N 169 DU "H3'" H N N 170 DU "HO3'" H N N 171 DU "H2'" H N N 172 DU "H2''" H N N 173 DU "H1'" H N N 174 DU H3 H N N 175 DU H5 H N N 176 DU H6 H N N 177 GLN N N N N 178 GLN CA C N S 179 GLN C C N N 180 GLN O O N N 181 GLN CB C N N 182 GLN CG C N N 183 GLN CD C N N 184 GLN OE1 O N N 185 GLN NE2 N N N 186 GLN OXT O N N 187 GLN H H N N 188 GLN H2 H N N 189 GLN HA H N N 190 GLN HB2 H N N 191 GLN HB3 H N N 192 GLN HG2 H N N 193 GLN HG3 H N N 194 GLN HE21 H N N 195 GLN HE22 H N N 196 GLN HXT H N N 197 GLU N N N N 198 GLU CA C N S 199 GLU C C N N 200 GLU O O N N 201 GLU CB C N N 202 GLU CG C N N 203 GLU CD C N N 204 GLU OE1 O N N 205 GLU OE2 O N N 206 GLU OXT O N N 207 GLU H H N N 208 GLU H2 H N N 209 GLU HA H N N 210 GLU HB2 H N N 211 GLU HB3 H N N 212 GLU HG2 H N N 213 GLU HG3 H N N 214 GLU HE2 H N N 215 GLU HXT H N N 216 GLY N N N N 217 GLY CA C N N 218 GLY C C N N 219 GLY O O N N 220 GLY OXT O N N 221 GLY H H N N 222 GLY H2 H N N 223 GLY HA2 H N N 224 GLY HA3 H N N 225 GLY HXT H N N 226 HIS N N N N 227 HIS CA C N S 228 HIS C C N N 229 HIS O O N N 230 HIS CB C N N 231 HIS CG C Y N 232 HIS ND1 N Y N 233 HIS CD2 C Y N 234 HIS CE1 C Y N 235 HIS NE2 N Y N 236 HIS OXT O N N 237 HIS H H N N 238 HIS H2 H N N 239 HIS HA H N N 240 HIS HB2 H N N 241 HIS HB3 H N N 242 HIS HD1 H N N 243 HIS HD2 H N N 244 HIS HE1 H N N 245 HIS HE2 H N N 246 HIS HXT H N N 247 HOH O O N N 248 HOH H1 H N N 249 HOH H2 H N N 250 ILE N N N N 251 ILE CA C N S 252 ILE C C N N 253 ILE O O N N 254 ILE CB C N S 255 ILE CG1 C N N 256 ILE CG2 C N N 257 ILE CD1 C N N 258 ILE OXT O N N 259 ILE H H N N 260 ILE H2 H N N 261 ILE HA H N N 262 ILE HB H N N 263 ILE HG12 H N N 264 ILE HG13 H N N 265 ILE HG21 H N N 266 ILE HG22 H N N 267 ILE HG23 H N N 268 ILE HD11 H N N 269 ILE HD12 H N N 270 ILE HD13 H N N 271 ILE HXT H N N 272 LEU N N N N 273 LEU CA C N S 274 LEU C C N N 275 LEU O O N N 276 LEU CB C N N 277 LEU CG C N N 278 LEU CD1 C N N 279 LEU CD2 C N N 280 LEU OXT O N N 281 LEU H H N N 282 LEU H2 H N N 283 LEU HA H N N 284 LEU HB2 H N N 285 LEU HB3 H N N 286 LEU HG H N N 287 LEU HD11 H N N 288 LEU HD12 H N N 289 LEU HD13 H N N 290 LEU HD21 H N N 291 LEU HD22 H N N 292 LEU HD23 H N N 293 LEU HXT H N N 294 LYS N N N N 295 LYS CA C N S 296 LYS C C N N 297 LYS O O N N 298 LYS CB C N N 299 LYS CG C N N 300 LYS CD C N N 301 LYS CE C N N 302 LYS NZ N N N 303 LYS OXT O N N 304 LYS H H N N 305 LYS H2 H N N 306 LYS HA H N N 307 LYS HB2 H N N 308 LYS HB3 H N N 309 LYS HG2 H N N 310 LYS HG3 H N N 311 LYS HD2 H N N 312 LYS HD3 H N N 313 LYS HE2 H N N 314 LYS HE3 H N N 315 LYS HZ1 H N N 316 LYS HZ2 H N N 317 LYS HZ3 H N N 318 LYS HXT H N N 319 MET N N N N 320 MET CA C N S 321 MET C C N N 322 MET O O N N 323 MET CB C N N 324 MET CG C N N 325 MET SD S N N 326 MET CE C N N 327 MET OXT O N N 328 MET H H N N 329 MET H2 H N N 330 MET HA H N N 331 MET HB2 H N N 332 MET HB3 H N N 333 MET HG2 H N N 334 MET HG3 H N N 335 MET HE1 H N N 336 MET HE2 H N N 337 MET HE3 H N N 338 MET HXT H N N 339 PRO N N N N 340 PRO CA C N S 341 PRO C C N N 342 PRO O O N N 343 PRO CB C N N 344 PRO CG C N N 345 PRO CD C N N 346 PRO OXT O N N 347 PRO H H N N 348 PRO HA H N N 349 PRO HB2 H N N 350 PRO HB3 H N N 351 PRO HG2 H N N 352 PRO HG3 H N N 353 PRO HD2 H N N 354 PRO HD3 H N N 355 PRO HXT H N N 356 SER N N N N 357 SER CA C N S 358 SER C C N N 359 SER O O N N 360 SER CB C N N 361 SER OG O N N 362 SER OXT O N N 363 SER H H N N 364 SER H2 H N N 365 SER HA H N N 366 SER HB2 H N N 367 SER HB3 H N N 368 SER HG H N N 369 SER HXT H N N 370 THR N N N N 371 THR CA C N S 372 THR C C N N 373 THR O O N N 374 THR CB C N R 375 THR OG1 O N N 376 THR CG2 C N N 377 THR OXT O N N 378 THR H H N N 379 THR H2 H N N 380 THR HA H N N 381 THR HB H N N 382 THR HG1 H N N 383 THR HG21 H N N 384 THR HG22 H N N 385 THR HG23 H N N 386 THR HXT H N N 387 TYR N N N N 388 TYR CA C N S 389 TYR C C N N 390 TYR O O N N 391 TYR CB C N N 392 TYR CG C Y N 393 TYR CD1 C Y N 394 TYR CD2 C Y N 395 TYR CE1 C Y N 396 TYR CE2 C Y N 397 TYR CZ C Y N 398 TYR OH O N N 399 TYR OXT O N N 400 TYR H H N N 401 TYR H2 H N N 402 TYR HA H N N 403 TYR HB2 H N N 404 TYR HB3 H N N 405 TYR HD1 H N N 406 TYR HD2 H N N 407 TYR HE1 H N N 408 TYR HE2 H N N 409 TYR HH H N N 410 TYR HXT H N N 411 VAL N N N N 412 VAL CA C N S 413 VAL C C N N 414 VAL O O N N 415 VAL CB C N N 416 VAL CG1 C N N 417 VAL CG2 C N N 418 VAL OXT O N N 419 VAL H H N N 420 VAL H2 H N N 421 VAL HA H N N 422 VAL HB H N N 423 VAL HG11 H N N 424 VAL HG12 H N N 425 VAL HG13 H N N 426 VAL HG21 H N N 427 VAL HG22 H N N 428 VAL HG23 H N N 429 VAL HXT H N N 430 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DU OP3 P sing N N 143 DU OP3 HOP3 sing N N 144 DU P OP1 doub N N 145 DU P OP2 sing N N 146 DU P "O5'" sing N N 147 DU OP2 HOP2 sing N N 148 DU "O5'" "C5'" sing N N 149 DU "C5'" "C4'" sing N N 150 DU "C5'" "H5'" sing N N 151 DU "C5'" "H5''" sing N N 152 DU "C4'" "O4'" sing N N 153 DU "C4'" "C3'" sing N N 154 DU "C4'" "H4'" sing N N 155 DU "O4'" "C1'" sing N N 156 DU "C3'" "O3'" sing N N 157 DU "C3'" "C2'" sing N N 158 DU "C3'" "H3'" sing N N 159 DU "O3'" "HO3'" sing N N 160 DU "C2'" "C1'" sing N N 161 DU "C2'" "H2'" sing N N 162 DU "C2'" "H2''" sing N N 163 DU "C1'" N1 sing N N 164 DU "C1'" "H1'" sing N N 165 DU N1 C2 sing N N 166 DU N1 C6 sing N N 167 DU C2 O2 doub N N 168 DU C2 N3 sing N N 169 DU N3 C4 sing N N 170 DU N3 H3 sing N N 171 DU C4 O4 doub N N 172 DU C4 C5 sing N N 173 DU C5 C6 doub N N 174 DU C5 H5 sing N N 175 DU C6 H6 sing N N 176 GLN N CA sing N N 177 GLN N H sing N N 178 GLN N H2 sing N N 179 GLN CA C sing N N 180 GLN CA CB sing N N 181 GLN CA HA sing N N 182 GLN C O doub N N 183 GLN C OXT sing N N 184 GLN CB CG sing N N 185 GLN CB HB2 sing N N 186 GLN CB HB3 sing N N 187 GLN CG CD sing N N 188 GLN CG HG2 sing N N 189 GLN CG HG3 sing N N 190 GLN CD OE1 doub N N 191 GLN CD NE2 sing N N 192 GLN NE2 HE21 sing N N 193 GLN NE2 HE22 sing N N 194 GLN OXT HXT sing N N 195 GLU N CA sing N N 196 GLU N H sing N N 197 GLU N H2 sing N N 198 GLU CA C sing N N 199 GLU CA CB sing N N 200 GLU CA HA sing N N 201 GLU C O doub N N 202 GLU C OXT sing N N 203 GLU CB CG sing N N 204 GLU CB HB2 sing N N 205 GLU CB HB3 sing N N 206 GLU CG CD sing N N 207 GLU CG HG2 sing N N 208 GLU CG HG3 sing N N 209 GLU CD OE1 doub N N 210 GLU CD OE2 sing N N 211 GLU OE2 HE2 sing N N 212 GLU OXT HXT sing N N 213 GLY N CA sing N N 214 GLY N H sing N N 215 GLY N H2 sing N N 216 GLY CA C sing N N 217 GLY CA HA2 sing N N 218 GLY CA HA3 sing N N 219 GLY C O doub N N 220 GLY C OXT sing N N 221 GLY OXT HXT sing N N 222 HIS N CA sing N N 223 HIS N H sing N N 224 HIS N H2 sing N N 225 HIS CA C sing N N 226 HIS CA CB sing N N 227 HIS CA HA sing N N 228 HIS C O doub N N 229 HIS C OXT sing N N 230 HIS CB CG sing N N 231 HIS CB HB2 sing N N 232 HIS CB HB3 sing N N 233 HIS CG ND1 sing Y N 234 HIS CG CD2 doub Y N 235 HIS ND1 CE1 doub Y N 236 HIS ND1 HD1 sing N N 237 HIS CD2 NE2 sing Y N 238 HIS CD2 HD2 sing N N 239 HIS CE1 NE2 sing Y N 240 HIS CE1 HE1 sing N N 241 HIS NE2 HE2 sing N N 242 HIS OXT HXT sing N N 243 HOH O H1 sing N N 244 HOH O H2 sing N N 245 ILE N CA sing N N 246 ILE N H sing N N 247 ILE N H2 sing N N 248 ILE CA C sing N N 249 ILE CA CB sing N N 250 ILE CA HA sing N N 251 ILE C O doub N N 252 ILE C OXT sing N N 253 ILE CB CG1 sing N N 254 ILE CB CG2 sing N N 255 ILE CB HB sing N N 256 ILE CG1 CD1 sing N N 257 ILE CG1 HG12 sing N N 258 ILE CG1 HG13 sing N N 259 ILE CG2 HG21 sing N N 260 ILE CG2 HG22 sing N N 261 ILE CG2 HG23 sing N N 262 ILE CD1 HD11 sing N N 263 ILE CD1 HD12 sing N N 264 ILE CD1 HD13 sing N N 265 ILE OXT HXT sing N N 266 LEU N CA sing N N 267 LEU N H sing N N 268 LEU N H2 sing N N 269 LEU CA C sing N N 270 LEU CA CB sing N N 271 LEU CA HA sing N N 272 LEU C O doub N N 273 LEU C OXT sing N N 274 LEU CB CG sing N N 275 LEU CB HB2 sing N N 276 LEU CB HB3 sing N N 277 LEU CG CD1 sing N N 278 LEU CG CD2 sing N N 279 LEU CG HG sing N N 280 LEU CD1 HD11 sing N N 281 LEU CD1 HD12 sing N N 282 LEU CD1 HD13 sing N N 283 LEU CD2 HD21 sing N N 284 LEU CD2 HD22 sing N N 285 LEU CD2 HD23 sing N N 286 LEU OXT HXT sing N N 287 LYS N CA sing N N 288 LYS N H sing N N 289 LYS N H2 sing N N 290 LYS CA C sing N N 291 LYS CA CB sing N N 292 LYS CA HA sing N N 293 LYS C O doub N N 294 LYS C OXT sing N N 295 LYS CB CG sing N N 296 LYS CB HB2 sing N N 297 LYS CB HB3 sing N N 298 LYS CG CD sing N N 299 LYS CG HG2 sing N N 300 LYS CG HG3 sing N N 301 LYS CD CE sing N N 302 LYS CD HD2 sing N N 303 LYS CD HD3 sing N N 304 LYS CE NZ sing N N 305 LYS CE HE2 sing N N 306 LYS CE HE3 sing N N 307 LYS NZ HZ1 sing N N 308 LYS NZ HZ2 sing N N 309 LYS NZ HZ3 sing N N 310 LYS OXT HXT sing N N 311 MET N CA sing N N 312 MET N H sing N N 313 MET N H2 sing N N 314 MET CA C sing N N 315 MET CA CB sing N N 316 MET CA HA sing N N 317 MET C O doub N N 318 MET C OXT sing N N 319 MET CB CG sing N N 320 MET CB HB2 sing N N 321 MET CB HB3 sing N N 322 MET CG SD sing N N 323 MET CG HG2 sing N N 324 MET CG HG3 sing N N 325 MET SD CE sing N N 326 MET CE HE1 sing N N 327 MET CE HE2 sing N N 328 MET CE HE3 sing N N 329 MET OXT HXT sing N N 330 PRO N CA sing N N 331 PRO N CD sing N N 332 PRO N H sing N N 333 PRO CA C sing N N 334 PRO CA CB sing N N 335 PRO CA HA sing N N 336 PRO C O doub N N 337 PRO C OXT sing N N 338 PRO CB CG sing N N 339 PRO CB HB2 sing N N 340 PRO CB HB3 sing N N 341 PRO CG CD sing N N 342 PRO CG HG2 sing N N 343 PRO CG HG3 sing N N 344 PRO CD HD2 sing N N 345 PRO CD HD3 sing N N 346 PRO OXT HXT sing N N 347 SER N CA sing N N 348 SER N H sing N N 349 SER N H2 sing N N 350 SER CA C sing N N 351 SER CA CB sing N N 352 SER CA HA sing N N 353 SER C O doub N N 354 SER C OXT sing N N 355 SER CB OG sing N N 356 SER CB HB2 sing N N 357 SER CB HB3 sing N N 358 SER OG HG sing N N 359 SER OXT HXT sing N N 360 THR N CA sing N N 361 THR N H sing N N 362 THR N H2 sing N N 363 THR CA C sing N N 364 THR CA CB sing N N 365 THR CA HA sing N N 366 THR C O doub N N 367 THR C OXT sing N N 368 THR CB OG1 sing N N 369 THR CB CG2 sing N N 370 THR CB HB sing N N 371 THR OG1 HG1 sing N N 372 THR CG2 HG21 sing N N 373 THR CG2 HG22 sing N N 374 THR CG2 HG23 sing N N 375 THR OXT HXT sing N N 376 TYR N CA sing N N 377 TYR N H sing N N 378 TYR N H2 sing N N 379 TYR CA C sing N N 380 TYR CA CB sing N N 381 TYR CA HA sing N N 382 TYR C O doub N N 383 TYR C OXT sing N N 384 TYR CB CG sing N N 385 TYR CB HB2 sing N N 386 TYR CB HB3 sing N N 387 TYR CG CD1 doub Y N 388 TYR CG CD2 sing Y N 389 TYR CD1 CE1 sing Y N 390 TYR CD1 HD1 sing N N 391 TYR CD2 CE2 doub Y N 392 TYR CD2 HD2 sing N N 393 TYR CE1 CZ doub Y N 394 TYR CE1 HE1 sing N N 395 TYR CE2 CZ sing Y N 396 TYR CE2 HE2 sing N N 397 TYR CZ OH sing N N 398 TYR OH HH sing N N 399 TYR OXT HXT sing N N 400 VAL N CA sing N N 401 VAL N H sing N N 402 VAL N H2 sing N N 403 VAL CA C sing N N 404 VAL CA CB sing N N 405 VAL CA HA sing N N 406 VAL C O doub N N 407 VAL C OXT sing N N 408 VAL CB CG1 sing N N 409 VAL CB CG2 sing N N 410 VAL CB HB sing N N 411 VAL CG1 HG11 sing N N 412 VAL CG1 HG12 sing N N 413 VAL CG1 HG13 sing N N 414 VAL CG2 HG21 sing N N 415 VAL CG2 HG22 sing N N 416 VAL CG2 HG23 sing N N 417 VAL OXT HXT sing N N 418 # _pdbx_audit_support.funding_organization 'Fonds Wetenschappelijk Onderzoek' _pdbx_audit_support.country Belgium _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4MZM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5DLO _atom_sites.fract_transf_matrix[1][1] 0.015723 _atom_sites.fract_transf_matrix[1][2] 0.009078 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018156 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014335 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S # loop_