HEADER TRANSFERASE 09-SEP-15 5DMU TITLE STRUCTURE OF THE NHEJ POLYMERASE FROM METHANOCELLA PALUDICOLA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NHEJ POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCELLA PALUDICOLA (STRAIN DSM 17711 / JCM SOURCE 3 13418 / NBRC 101707 / SANAE); SOURCE 4 ORGANISM_TAXID: 304371; SOURCE 5 STRAIN: DSM 17711 / JCM 13418 / NBRC 101707 / SANAE; SOURCE 6 GENE: MCP_2125; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS ARCHAEAL PROTEINS, BIOCATALYSIS, DNA REPAIR ENZYMES, DNA-DIRECTED DNA KEYWDS 2 POLYMERASE, PROTEIN STRUCTURE, RIBONUCLEOTIDES, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.C.BRISSETT,E.J.BARTLETT,A.J.DOHERTY REVDAT 3 10-JAN-24 5DMU 1 REMARK REVDAT 2 30-MAR-16 5DMU 1 JRNL REVDAT 1 07-OCT-15 5DMU 0 JRNL AUTH E.J.BARTLETT,N.C.BRISSETT,P.PLOCINSKI,T.CARLBERG,A.J.DOHERTY JRNL TITL MOLECULAR BASIS FOR DNA STRAND DISPLACEMENT BY NHEJ REPAIR JRNL TITL 2 POLYMERASES. JRNL REF NUCLEIC ACIDS RES. V. 44 2173 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 26405198 JRNL DOI 10.1093/NAR/GKV965 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 20996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1131 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1175 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.1680 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.2170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 288 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.13000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.175 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2507 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3391 ; 1.820 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 6.806 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;31.897 ;22.479 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 426 ;14.442 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;17.897 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 362 ; 0.135 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1932 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1218 ; 1.094 ; 1.187 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1526 ; 1.701 ; 1.768 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1289 ; 2.359 ; 1.479 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5DMU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX-HF MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22140 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.949 REMARK 200 RESOLUTION RANGE LOW (A) : 58.315 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : 0.20000 REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: 2IRU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM SULFATE, 20% (W/V) PEG REMARK 280 335, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.27500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 699 O HOH A 730 1.69 REMARK 500 O HOH A 565 O HOH A 734 1.79 REMARK 500 O HOH A 720 O HOH A 762 1.86 REMARK 500 O HOH A 664 O HOH A 769 1.90 REMARK 500 O HOH A 582 O HOH A 714 1.90 REMARK 500 CE MET A 290 O HOH A 755 2.01 REMARK 500 O HOH A 721 O HOH A 730 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 165 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 208 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP A 298 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 143 68.88 -154.64 REMARK 500 SER A 189 -93.58 -130.30 REMARK 500 SER A 189 -92.02 -138.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 406 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 149 O REMARK 620 2 ASN A 246 OD1 89.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 406 DBREF 5DMU A 21 313 UNP D1Z0H5 D1Z0H5_METPS 1 293 SEQADV 5DMU GLY A 13 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU LEU A 14 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU VAL A 15 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU PRO A 16 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU ARG A 17 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU GLY A 18 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU SER A 19 UNP D1Z0H5 EXPRESSION TAG SEQADV 5DMU HIS A 20 UNP D1Z0H5 EXPRESSION TAG SEQRES 1 A 301 GLY LEU VAL PRO ARG GLY SER HIS MET THR GLU VAL LEU SEQRES 2 A 301 HIS ILE GLU GLY HIS ASP ILE LYS VAL THR ASN PRO ASP SEQRES 3 A 301 LYS VAL LEU PHE PRO GLU ASP GLY ILE THR LYS GLY GLU SEQRES 4 A 301 LEU VAL ASP TYR TYR ARG ARG ILE SER GLY VAL MET VAL SEQRES 5 A 301 PRO LEU VAL ARG GLY ARG PRO MET THR MET GLN ARG PHE SEQRES 6 A 301 PRO ASP GLY ILE GLY LYS GLU GLY PHE PHE GLN LYS GLU SEQRES 7 A 301 ALA SER ASP TYR PHE PRO ASP TRP VAL HIS ARG ALA THR SEQRES 8 A 301 LEU GLU LEU GLY LYS GLY GLY ILE GLN HIS GLN VAL VAL SEQRES 9 A 301 CYS ASP ASP ALA ALA THR LEU VAL TYR LEU ALA SER GLN SEQRES 10 A 301 ALA MET ILE THR PRO HIS VAL PHE LEU SER ARG ILE ASP SEQRES 11 A 301 LYS VAL HIS TYR PRO ASP ARG LEU ILE PHE ASP LEU ASP SEQRES 12 A 301 PRO PRO ASP ASN ASN PHE GLU THR VAL ARG SER ALA ALA SEQRES 13 A 301 LYS THR ILE ARG GLU ALA LEU ASP ALA GLU GLY TYR PRO SEQRES 14 A 301 VAL TYR LEU MET THR THR GLY SER ARG GLY LEU HIS VAL SEQRES 15 A 301 VAL VAL PRO LEU ASP ARG SER ALA ASP PHE ASP THR VAL SEQRES 16 A 301 ARG ALA PHE ALA ARG GLY PHE GLY GLU LYS LEU THR LYS SEQRES 17 A 301 LYS TYR PRO ASP ARG PHE THR ILE GLU LEU SER LYS GLU SEQRES 18 A 301 LYS ARG ARG GLY ARG LEU PHE LEU ASP TYR LEU ARG ASN SEQRES 19 A 301 SER TYR GLY GLN THR GLY VAL ALA PRO TYR GLY VAL ARG SEQRES 20 A 301 ALA ARG SER GLY ALA PRO VAL ALA THR PRO ILE THR TRP SEQRES 21 A 301 ASP GLU LEU ASP ASP ILE SER GLY SER GLN GLU TYR ASN SEQRES 22 A 301 ILE ARG ASN ILE MET GLY ARG MET ASP LYS ARG GLY ASP SEQRES 23 A 301 ALA TRP LYS TYR ILE ASP LYS ASP ARG THR SER ILE LYS SEQRES 24 A 301 ASN LEU HET EDO A 401 4 HET EDO A 402 4 HET GOL A 403 6 HET SO4 A 404 5 HET SO4 A 405 5 HET NA A 406 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 GOL C3 H8 O3 FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 NA NA 1+ FORMUL 8 HOH *288(H2 O) HELIX 1 AA1 LYS A 49 ARG A 68 1 20 HELIX 2 AA2 ASP A 119 GLN A 129 1 11 HELIX 3 AA3 ARG A 140 VAL A 144 5 5 HELIX 4 AA4 ASN A 160 GLU A 178 1 19 HELIX 5 AA5 ASP A 203 TYR A 222 1 20 HELIX 6 AA6 ASP A 273 ILE A 278 1 6 HELIX 7 AA7 ASN A 288 GLY A 297 1 10 HELIX 8 AA8 TYR A 302 ARG A 307 5 6 SHEET 1 AA1 2 THR A 22 ILE A 27 0 SHEET 2 AA1 2 HIS A 30 THR A 35 -1 O VAL A 34 N GLU A 23 SHEET 1 AA2 2 VAL A 40 PHE A 42 0 SHEET 2 AA2 2 ILE A 47 THR A 48 -1 O ILE A 47 N LEU A 41 SHEET 1 AA3 4 PHE A 86 GLN A 88 0 SHEET 2 AA3 4 PRO A 71 ARG A 76 -1 N MET A 74 O GLN A 88 SHEET 3 AA3 4 ILE A 111 VAL A 116 -1 O VAL A 115 N MET A 72 SHEET 4 AA3 4 ARG A 101 GLU A 105 -1 N LEU A 104 O GLN A 112 SHEET 1 AA4 4 PHE A 86 GLN A 88 0 SHEET 2 AA4 4 PRO A 71 ARG A 76 -1 N MET A 74 O GLN A 88 SHEET 3 AA4 4 MET A 131 PHE A 137 -1 O HIS A 135 N THR A 73 SHEET 4 AA4 4 THR A 251 VAL A 253 -1 O GLY A 252 N VAL A 136 SHEET 1 AA5 3 ARG A 149 LEU A 154 0 SHEET 2 AA5 3 LEU A 192 PRO A 197 -1 O LEU A 192 N LEU A 154 SHEET 3 AA5 3 TYR A 183 THR A 186 -1 N TYR A 183 O VAL A 195 SHEET 1 AA6 2 PHE A 226 THR A 227 0 SHEET 2 AA6 2 LEU A 239 PHE A 240 1 O LEU A 239 N THR A 227 LINK O ARG A 149 NA NA A 406 1555 1555 2.93 LINK OD1 ASN A 246 NA NA A 406 1555 1555 2.79 SITE 1 AC1 4 GLN A 75 HIS A 135 ARG A 259 HOH A 655 SITE 1 AC2 7 ARG A 17 SER A 19 PRO A 37 ASP A 38 SITE 2 AC2 7 THR A 48 GLU A 51 HOH A 517 SITE 1 AC3 10 VAL A 136 PHE A 137 LEU A 138 ARG A 149 SITE 2 AC3 10 ILE A 151 GLY A 252 PRO A 255 HOH A 527 SITE 3 AC3 10 HOH A 536 HOH A 629 SITE 1 AC4 6 ASP A 199 ARG A 200 ARG A 307 HOH A 623 SITE 2 AC4 6 HOH A 659 HOH A 677 SITE 1 AC5 8 THR A 35 LYS A 49 GLN A 129 HOH A 518 SITE 2 AC5 8 HOH A 528 HOH A 540 HOH A 649 HOH A 704 SITE 1 AC6 5 PRO A 147 ARG A 149 PHE A 204 VAL A 207 SITE 2 AC6 5 ASN A 246 CRYST1 44.420 60.550 59.410 90.00 101.02 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022512 0.000000 0.004384 0.00000 SCALE2 0.000000 0.016515 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017148 0.00000