data_5DMV # _entry.id 5DMV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5DMV WWPDB D_1000213451 # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5DMS _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DMV _pdbx_database_status.recvd_initial_deposition_date 2015-09-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Namgoong, S.' _audit_author.pdbx_ordinal 1 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first 14626 _citation.page_last 14626 _citation.title ;Structural basis for recognition of Emi2 by Polo-like kinase 1 and development of peptidomimetics blocking oocyte maturation and fertilization. ; _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep14626 _citation.pdbx_database_id_PubMed 26459104 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jia, J.L.' 1 primary 'Han, Y.H.' 2 primary 'Kim, H.C.' 3 primary 'Ahn, M.' 4 primary 'Kwon, J.W.' 5 primary 'Luo, Y.' 6 primary 'Gunasekaran, P.' 7 primary 'Lee, S.J.' 8 primary 'Lee, K.S.' 9 primary 'Bang, J.K.' 10 primary 'Kim, N.H.' 11 primary 'Namgoong, S.' 12 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 97.20 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5DMV _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.627 _cell.length_a_esd ? _cell.length_b 63.329 _cell.length_b_esd ? _cell.length_c 56.831 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Serine/threonine-protein kinase PLK1' 27242.980 1 2.7.11.21 ? 'UNP RESIDUES 367-603' ? 2 polymer syn 'F-box only protein 43' 3707.863 1 ? ? 'Emi2 peptide (UNP RESIDUES 146-177)' ? 3 non-polymer syn 'NICKEL (II) ION' 58.693 3 ? ? ? ? 4 water nat water 18.015 38 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Polo-like kinase 1,PLK-1,Serine/threonine-protein kinase 13,STPK13' 2 'Endogenous meiotic inhibitor 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NEAIECHLSDLLQQLTSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLNYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGTVQINFFQDHTKLILCPLMAAVTYINEKRDFQTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS ; ;NEAIECHLSDLLQQLTSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLNYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGTVQINFFQDHTKLILCPLMAAVTYINEKRDFQTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS ; C ? 2 'polypeptide(L)' no yes 'SPLVTS(TPO)IKTEDVVSNSQNSRLHFSQHKTS(TPO)I' SPLVTSTIKTEDVVSNSQNSRLHFSQHKTSTI D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 GLU n 1 3 ALA n 1 4 ILE n 1 5 GLU n 1 6 CYS n 1 7 HIS n 1 8 LEU n 1 9 SER n 1 10 ASP n 1 11 LEU n 1 12 LEU n 1 13 GLN n 1 14 GLN n 1 15 LEU n 1 16 THR n 1 17 SER n 1 18 VAL n 1 19 ASN n 1 20 ALA n 1 21 SER n 1 22 LYS n 1 23 PRO n 1 24 SER n 1 25 GLU n 1 26 ARG n 1 27 GLY n 1 28 LEU n 1 29 VAL n 1 30 ARG n 1 31 GLN n 1 32 GLU n 1 33 GLU n 1 34 ALA n 1 35 GLU n 1 36 ASP n 1 37 PRO n 1 38 ALA n 1 39 CYS n 1 40 ILE n 1 41 PRO n 1 42 ILE n 1 43 PHE n 1 44 TRP n 1 45 VAL n 1 46 SER n 1 47 LYS n 1 48 TRP n 1 49 VAL n 1 50 ASP n 1 51 TYR n 1 52 SER n 1 53 ASP n 1 54 LYS n 1 55 TYR n 1 56 GLY n 1 57 LEU n 1 58 GLY n 1 59 TYR n 1 60 GLN n 1 61 LEU n 1 62 CYS n 1 63 ASP n 1 64 ASN n 1 65 SER n 1 66 VAL n 1 67 GLY n 1 68 VAL n 1 69 LEU n 1 70 PHE n 1 71 ASN n 1 72 ASP n 1 73 SER n 1 74 THR n 1 75 ARG n 1 76 LEU n 1 77 ILE n 1 78 LEU n 1 79 TYR n 1 80 ASN n 1 81 ASP n 1 82 GLY n 1 83 ASP n 1 84 SER n 1 85 LEU n 1 86 GLN n 1 87 TYR n 1 88 ILE n 1 89 GLU n 1 90 ARG n 1 91 ASP n 1 92 GLY n 1 93 THR n 1 94 GLU n 1 95 SER n 1 96 TYR n 1 97 LEU n 1 98 THR n 1 99 VAL n 1 100 SER n 1 101 SER n 1 102 HIS n 1 103 PRO n 1 104 ASN n 1 105 SER n 1 106 LEU n 1 107 MET n 1 108 LYS n 1 109 LYS n 1 110 ILE n 1 111 THR n 1 112 LEU n 1 113 LEU n 1 114 ASN n 1 115 TYR n 1 116 PHE n 1 117 ARG n 1 118 ASN n 1 119 TYR n 1 120 MET n 1 121 SER n 1 122 GLU n 1 123 HIS n 1 124 LEU n 1 125 LEU n 1 126 LYS n 1 127 ALA n 1 128 GLY n 1 129 ALA n 1 130 ASN n 1 131 ILE n 1 132 THR n 1 133 PRO n 1 134 ARG n 1 135 GLU n 1 136 GLY n 1 137 ASP n 1 138 GLU n 1 139 LEU n 1 140 ALA n 1 141 ARG n 1 142 LEU n 1 143 PRO n 1 144 TYR n 1 145 LEU n 1 146 ARG n 1 147 THR n 1 148 TRP n 1 149 PHE n 1 150 ARG n 1 151 THR n 1 152 ARG n 1 153 SER n 1 154 ALA n 1 155 ILE n 1 156 ILE n 1 157 LEU n 1 158 HIS n 1 159 LEU n 1 160 SER n 1 161 ASN n 1 162 GLY n 1 163 THR n 1 164 VAL n 1 165 GLN n 1 166 ILE n 1 167 ASN n 1 168 PHE n 1 169 PHE n 1 170 GLN n 1 171 ASP n 1 172 HIS n 1 173 THR n 1 174 LYS n 1 175 LEU n 1 176 ILE n 1 177 LEU n 1 178 CYS n 1 179 PRO n 1 180 LEU n 1 181 MET n 1 182 ALA n 1 183 ALA n 1 184 VAL n 1 185 THR n 1 186 TYR n 1 187 ILE n 1 188 ASN n 1 189 GLU n 1 190 LYS n 1 191 ARG n 1 192 ASP n 1 193 PHE n 1 194 GLN n 1 195 THR n 1 196 TYR n 1 197 ARG n 1 198 LEU n 1 199 SER n 1 200 LEU n 1 201 LEU n 1 202 GLU n 1 203 GLU n 1 204 TYR n 1 205 GLY n 1 206 CYS n 1 207 CYS n 1 208 LYS n 1 209 GLU n 1 210 LEU n 1 211 ALA n 1 212 SER n 1 213 ARG n 1 214 LEU n 1 215 ARG n 1 216 TYR n 1 217 ALA n 1 218 ARG n 1 219 THR n 1 220 MET n 1 221 VAL n 1 222 ASP n 1 223 LYS n 1 224 LEU n 1 225 LEU n 1 226 SER n 1 227 SER n 1 228 ARG n 1 229 SER n 1 230 ALA n 1 231 SER n 1 232 ASN n 1 233 ARG n 1 234 LEU n 1 235 LYS n 1 236 ALA n 1 237 SER n 2 1 SER n 2 2 PRO n 2 3 LEU n 2 4 VAL n 2 5 THR n 2 6 SER n 2 7 TPO n 2 8 ILE n 2 9 LYS n 2 10 THR n 2 11 GLU n 2 12 ASP n 2 13 VAL n 2 14 VAL n 2 15 SER n 2 16 ASN n 2 17 SER n 2 18 GLN n 2 19 ASN n 2 20 SER n 2 21 ARG n 2 22 LEU n 2 23 HIS n 2 24 PHE n 2 25 SER n 2 26 GLN n 2 27 HIS n 2 28 LYS n 2 29 THR n 2 30 SER n 2 31 TPO n 2 32 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 237 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Plk1, Plk' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'Mus musculus' _pdbx_entity_src_syn.organism_common_name Mouse _pdbx_entity_src_syn.ncbi_taxonomy_id 10090 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PLK1_MOUSE Q07832 ? 1 ;NEAIECHLSDLLQQLTSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLNYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGTVQINFFQDHTKLILCPLMAAVTYINEKRDFQTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS ; 367 2 UNP FBX43_MOUSE Q8CDI2 ? 2 SPLVTSTIKTEDVVSNSQNSRLHFSQHKTSTI 146 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DMV C 1 ? 237 ? Q07832 367 ? 603 ? 367 603 2 2 5DMV D 1 ? 32 ? Q8CDI2 146 ? 177 ? 146 177 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DMV _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10mM MgCl2, 5mM NiCl2, 15% PEG 3350, 0.1 M HEPES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 7A (6B, 6C1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '7A (6B, 6C1)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DMV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.499 _reflns.d_resolution_low 28.414 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8266 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.499 _reflns_shell.d_res_low 2.6 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.47 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 89.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.438 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DMV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.499 _refine.ls_d_res_low 28.414 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8266 _refine.ls_number_reflns_R_free 414 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.10 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2156 _refine.ls_R_factor_R_free 0.2909 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2117 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.04 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 33.24 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.35 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1934 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 1975 _refine_hist.d_res_high 2.499 _refine_hist.d_res_low 28.414 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 ? 1973 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.975 ? 2673 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 14.061 ? 733 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.090 ? 307 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 ? 335 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.4993 2.8606 . . 130 2471 90.00 . . . 0.3304 . 0.2354 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8606 3.6030 . . 141 2678 97.00 . . . 0.2679 . 0.2241 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6030 28.4163 . . 143 2703 96.00 . . . 0.2908 . 0.1975 . . . . . . . . . . # _struct.entry_id 5DMV _struct.title 'Polo-box domain of Mouse Polo-like kinase 1 complexed with Emi2 (146-177)' _struct.pdbx_descriptor 'Serine/threonine-protein kinase PLK1 (E.C.2.7.11.21), F-box only protein 43' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DMV _struct_keywords.text 'Polo-box, PLK1, Emi2, meiosis, TRANSFERASE-METAL BINDING PROTEIN complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 7 ? SER A 21 ? HIS C 373 SER C 387 1 ? 15 HELX_P HELX_P2 AA2 ARG A 30 ? GLU A 35 ? ARG C 396 GLU C 401 5 ? 6 HELX_P HELX_P3 AA3 ASP A 36 ? ILE A 40 ? ASP C 402 ILE C 406 5 ? 5 HELX_P HELX_P4 AA4 PRO A 103 ? SER A 105 ? PRO C 469 SER C 471 5 ? 3 HELX_P HELX_P5 AA5 LEU A 106 ? HIS A 123 ? LEU C 472 HIS C 489 1 ? 18 HELX_P HELX_P6 AA6 LEU A 198 ? GLY A 205 ? LEU C 564 GLY C 571 1 ? 8 HELX_P HELX_P7 AA7 CYS A 207 ? SER A 227 ? CYS C 573 SER C 593 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 102 NE2 ? ? ? 1_555 E NI . NI ? ? C HIS 468 C NI 703 1_555 ? ? ? ? ? ? ? 2.334 ? metalc2 metalc ? ? A HIS 123 NE2 ? ? ? 1_555 C NI . NI ? ? C HIS 489 C NI 701 1_555 ? ? ? ? ? ? ? 2.379 ? metalc3 metalc ? ? A HIS 172 NE2 ? ? ? 1_555 D NI . NI ? ? C HIS 538 C NI 702 1_555 ? ? ? ? ? ? ? 2.129 ? covale1 covale both ? B SER 6 C ? ? ? 1_555 B TPO 7 N ? ? D SER 151 D TPO 152 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale both ? B TPO 7 C ? ? ? 1_555 B ILE 8 N ? ? D TPO 152 D ILE 153 1_555 ? ? ? ? ? ? ? 1.320 ? metalc4 metalc ? ? C NI . NI ? ? ? 1_555 F HOH . O ? ? C NI 701 C HOH 825 1_555 ? ? ? ? ? ? ? 1.914 ? metalc5 metalc ? ? C NI . NI ? ? ? 1_555 F HOH . O ? ? C NI 701 C HOH 834 1_555 ? ? ? ? ? ? ? 2.196 ? metalc6 metalc ? ? D NI . NI ? ? ? 1_555 F HOH . O ? ? C NI 702 C HOH 818 1_555 ? ? ? ? ? ? ? 1.900 ? metalc7 metalc ? ? E NI . NI ? ? ? 1_555 F HOH . O ? ? C NI 703 C HOH 802 1_555 ? ? ? ? ? ? ? 1.926 ? metalc8 metalc ? ? C NI . NI ? ? ? 1_555 F HOH . O ? ? C NI 701 C HOH 832 1_455 ? ? ? ? ? ? ? 1.957 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 136 A . ? GLY 502 C ASP 137 A ? ASP 503 C 1 23.33 2 LEU 139 A . ? LEU 505 C ALA 140 A ? ALA 506 C 1 -4.41 3 ASP 12 B . ? ASP 157 D VAL 13 B ? VAL 158 D 1 -20.17 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 45 ? TYR A 51 ? VAL C 411 TYR C 417 AA1 2 GLY A 56 ? LEU A 61 ? GLY C 422 LEU C 427 AA1 3 VAL A 66 ? PHE A 70 ? VAL C 432 PHE C 436 AA1 4 ARG A 75 ? LEU A 78 ? ARG C 441 LEU C 444 AA1 5 SER A 84 ? ILE A 88 ? SER C 450 ILE C 454 AA1 6 SER A 95 ? THR A 98 ? SER C 461 THR C 464 AA2 1 LEU A 145 ? ARG A 150 ? LEU C 511 ARG C 516 AA2 2 ALA A 154 ? LEU A 159 ? ALA C 520 LEU C 525 AA2 3 VAL A 164 ? PHE A 168 ? VAL C 530 PHE C 534 AA2 4 LYS A 174 ? CYS A 178 ? LYS C 540 CYS C 544 AA2 5 ALA A 183 ? ILE A 187 ? ALA C 549 ILE C 553 AA2 6 PHE A 193 ? ARG A 197 ? PHE C 559 ARG C 563 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 49 ? N VAL C 415 O GLY A 58 ? O GLY C 424 AA1 2 3 N TYR A 59 ? N TYR C 425 O GLY A 67 ? O GLY C 433 AA1 3 4 N VAL A 66 ? N VAL C 432 O LEU A 78 ? O LEU C 444 AA1 4 5 N ILE A 77 ? N ILE C 443 O GLN A 86 ? O GLN C 452 AA1 5 6 N TYR A 87 ? N TYR C 453 O SER A 95 ? O SER C 461 AA2 1 2 N PHE A 149 ? N PHE C 515 O ILE A 156 ? O ILE C 522 AA2 2 3 N LEU A 157 ? N LEU C 523 O GLN A 165 ? O GLN C 531 AA2 3 4 N ILE A 166 ? N ILE C 532 O LEU A 175 ? O LEU C 541 AA2 4 5 N ILE A 176 ? N ILE C 542 O THR A 185 ? O THR C 551 AA2 5 6 N VAL A 184 ? N VAL C 550 O TYR A 196 ? O TYR C 562 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C NI 701 ? 4 'binding site for residue NI C 701' AC2 Software C NI 702 ? 2 'binding site for residue NI C 702' AC3 Software C NI 703 ? 2 'binding site for residue NI C 703' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 123 ? HIS C 489 . ? 1_555 ? 2 AC1 4 HOH F . ? HOH C 825 . ? 1_555 ? 3 AC1 4 HOH F . ? HOH C 832 . ? 1_455 ? 4 AC1 4 HOH F . ? HOH C 834 . ? 1_555 ? 5 AC2 2 HIS A 172 ? HIS C 538 . ? 1_555 ? 6 AC2 2 HOH F . ? HOH C 818 . ? 1_555 ? 7 AC3 2 HIS A 102 ? HIS C 468 . ? 1_555 ? 8 AC3 2 HOH F . ? HOH C 802 . ? 1_555 ? # _atom_sites.entry_id 5DMV _atom_sites.fract_transf_matrix[1][1] 0.028069 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003545 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015791 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017736 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 367 ? ? ? C . n A 1 2 GLU 2 368 ? ? ? C . n A 1 3 ALA 3 369 ? ? ? C . n A 1 4 ILE 4 370 ? ? ? C . n A 1 5 GLU 5 371 ? ? ? C . n A 1 6 CYS 6 372 372 CYS CYS C . n A 1 7 HIS 7 373 373 HIS HIS C . n A 1 8 LEU 8 374 374 LEU LEU C . n A 1 9 SER 9 375 375 SER SER C . n A 1 10 ASP 10 376 376 ASP ASP C . n A 1 11 LEU 11 377 377 LEU LEU C . n A 1 12 LEU 12 378 378 LEU LEU C . n A 1 13 GLN 13 379 379 GLN GLN C . n A 1 14 GLN 14 380 380 GLN GLN C . n A 1 15 LEU 15 381 381 LEU LEU C . n A 1 16 THR 16 382 382 THR THR C . n A 1 17 SER 17 383 383 SER SER C . n A 1 18 VAL 18 384 384 VAL VAL C . n A 1 19 ASN 19 385 385 ASN ASN C . n A 1 20 ALA 20 386 386 ALA ALA C . n A 1 21 SER 21 387 387 SER SER C . n A 1 22 LYS 22 388 388 LYS LYS C . n A 1 23 PRO 23 389 389 PRO PRO C . n A 1 24 SER 24 390 390 SER SER C . n A 1 25 GLU 25 391 391 GLU GLU C . n A 1 26 ARG 26 392 392 ARG ARG C . n A 1 27 GLY 27 393 393 GLY GLY C . n A 1 28 LEU 28 394 394 LEU LEU C . n A 1 29 VAL 29 395 395 VAL VAL C . n A 1 30 ARG 30 396 396 ARG ARG C . n A 1 31 GLN 31 397 397 GLN GLN C . n A 1 32 GLU 32 398 398 GLU GLU C . n A 1 33 GLU 33 399 399 GLU GLU C . n A 1 34 ALA 34 400 400 ALA ALA C . n A 1 35 GLU 35 401 401 GLU GLU C . n A 1 36 ASP 36 402 402 ASP ASP C . n A 1 37 PRO 37 403 403 PRO PRO C . n A 1 38 ALA 38 404 404 ALA ALA C . n A 1 39 CYS 39 405 405 CYS CYS C . n A 1 40 ILE 40 406 406 ILE ILE C . n A 1 41 PRO 41 407 407 PRO PRO C . n A 1 42 ILE 42 408 408 ILE ILE C . n A 1 43 PHE 43 409 409 PHE PHE C . n A 1 44 TRP 44 410 410 TRP TRP C . n A 1 45 VAL 45 411 411 VAL VAL C . n A 1 46 SER 46 412 412 SER SER C . n A 1 47 LYS 47 413 413 LYS LYS C . n A 1 48 TRP 48 414 414 TRP TRP C . n A 1 49 VAL 49 415 415 VAL VAL C . n A 1 50 ASP 50 416 416 ASP ASP C . n A 1 51 TYR 51 417 417 TYR TYR C . n A 1 52 SER 52 418 418 SER SER C . n A 1 53 ASP 53 419 419 ASP ASP C . n A 1 54 LYS 54 420 420 LYS LYS C . n A 1 55 TYR 55 421 421 TYR TYR C . n A 1 56 GLY 56 422 422 GLY GLY C . n A 1 57 LEU 57 423 423 LEU LEU C . n A 1 58 GLY 58 424 424 GLY GLY C . n A 1 59 TYR 59 425 425 TYR TYR C . n A 1 60 GLN 60 426 426 GLN GLN C . n A 1 61 LEU 61 427 427 LEU LEU C . n A 1 62 CYS 62 428 428 CYS CYS C . n A 1 63 ASP 63 429 429 ASP ASP C . n A 1 64 ASN 64 430 430 ASN ASN C . n A 1 65 SER 65 431 431 SER SER C . n A 1 66 VAL 66 432 432 VAL VAL C . n A 1 67 GLY 67 433 433 GLY GLY C . n A 1 68 VAL 68 434 434 VAL VAL C . n A 1 69 LEU 69 435 435 LEU LEU C . n A 1 70 PHE 70 436 436 PHE PHE C . n A 1 71 ASN 71 437 437 ASN ASN C . n A 1 72 ASP 72 438 438 ASP ASP C . n A 1 73 SER 73 439 439 SER SER C . n A 1 74 THR 74 440 440 THR THR C . n A 1 75 ARG 75 441 441 ARG ARG C . n A 1 76 LEU 76 442 442 LEU LEU C . n A 1 77 ILE 77 443 443 ILE ILE C . n A 1 78 LEU 78 444 444 LEU LEU C . n A 1 79 TYR 79 445 445 TYR TYR C . n A 1 80 ASN 80 446 446 ASN ASN C . n A 1 81 ASP 81 447 447 ASP ASP C . n A 1 82 GLY 82 448 448 GLY GLY C . n A 1 83 ASP 83 449 449 ASP ASP C . n A 1 84 SER 84 450 450 SER SER C . n A 1 85 LEU 85 451 451 LEU LEU C . n A 1 86 GLN 86 452 452 GLN GLN C . n A 1 87 TYR 87 453 453 TYR TYR C . n A 1 88 ILE 88 454 454 ILE ILE C . n A 1 89 GLU 89 455 455 GLU GLU C . n A 1 90 ARG 90 456 456 ARG ARG C . n A 1 91 ASP 91 457 457 ASP ASP C . n A 1 92 GLY 92 458 458 GLY GLY C . n A 1 93 THR 93 459 459 THR THR C . n A 1 94 GLU 94 460 460 GLU GLU C . n A 1 95 SER 95 461 461 SER SER C . n A 1 96 TYR 96 462 462 TYR TYR C . n A 1 97 LEU 97 463 463 LEU LEU C . n A 1 98 THR 98 464 464 THR THR C . n A 1 99 VAL 99 465 465 VAL VAL C . n A 1 100 SER 100 466 466 SER SER C . n A 1 101 SER 101 467 467 SER SER C . n A 1 102 HIS 102 468 468 HIS HIS C . n A 1 103 PRO 103 469 469 PRO PRO C . n A 1 104 ASN 104 470 470 ASN ASN C . n A 1 105 SER 105 471 471 SER SER C . n A 1 106 LEU 106 472 472 LEU LEU C . n A 1 107 MET 107 473 473 MET MET C . n A 1 108 LYS 108 474 474 LYS LYS C . n A 1 109 LYS 109 475 475 LYS LYS C . n A 1 110 ILE 110 476 476 ILE ILE C . n A 1 111 THR 111 477 477 THR THR C . n A 1 112 LEU 112 478 478 LEU LEU C . n A 1 113 LEU 113 479 479 LEU LEU C . n A 1 114 ASN 114 480 480 ASN ASN C . n A 1 115 TYR 115 481 481 TYR TYR C . n A 1 116 PHE 116 482 482 PHE PHE C . n A 1 117 ARG 117 483 483 ARG ARG C . n A 1 118 ASN 118 484 484 ASN ASN C . n A 1 119 TYR 119 485 485 TYR TYR C . n A 1 120 MET 120 486 486 MET MET C . n A 1 121 SER 121 487 487 SER SER C . n A 1 122 GLU 122 488 488 GLU GLU C . n A 1 123 HIS 123 489 489 HIS HIS C . n A 1 124 LEU 124 490 490 LEU LEU C . n A 1 125 LEU 125 491 491 LEU LEU C . n A 1 126 LYS 126 492 492 LYS LYS C . n A 1 127 ALA 127 493 493 ALA ALA C . n A 1 128 GLY 128 494 494 GLY GLY C . n A 1 129 ALA 129 495 495 ALA ALA C . n A 1 130 ASN 130 496 496 ASN ASN C . n A 1 131 ILE 131 497 497 ILE ILE C . n A 1 132 THR 132 498 498 THR THR C . n A 1 133 PRO 133 499 499 PRO PRO C . n A 1 134 ARG 134 500 500 ARG ARG C . n A 1 135 GLU 135 501 501 GLU GLU C . n A 1 136 GLY 136 502 502 GLY GLY C . n A 1 137 ASP 137 503 503 ASP ASP C . n A 1 138 GLU 138 504 504 GLU GLU C . n A 1 139 LEU 139 505 505 LEU LEU C . n A 1 140 ALA 140 506 506 ALA ALA C . n A 1 141 ARG 141 507 507 ARG ARG C . n A 1 142 LEU 142 508 508 LEU LEU C . n A 1 143 PRO 143 509 509 PRO PRO C . n A 1 144 TYR 144 510 510 TYR TYR C . n A 1 145 LEU 145 511 511 LEU LEU C . n A 1 146 ARG 146 512 512 ARG ARG C . n A 1 147 THR 147 513 513 THR THR C . n A 1 148 TRP 148 514 514 TRP TRP C . n A 1 149 PHE 149 515 515 PHE PHE C . n A 1 150 ARG 150 516 516 ARG ARG C . n A 1 151 THR 151 517 517 THR THR C . n A 1 152 ARG 152 518 518 ARG ARG C . n A 1 153 SER 153 519 519 SER SER C . n A 1 154 ALA 154 520 520 ALA ALA C . n A 1 155 ILE 155 521 521 ILE ILE C . n A 1 156 ILE 156 522 522 ILE ILE C . n A 1 157 LEU 157 523 523 LEU LEU C . n A 1 158 HIS 158 524 524 HIS HIS C . n A 1 159 LEU 159 525 525 LEU LEU C . n A 1 160 SER 160 526 526 SER SER C . n A 1 161 ASN 161 527 527 ASN ASN C . n A 1 162 GLY 162 528 528 GLY GLY C . n A 1 163 THR 163 529 529 THR THR C . n A 1 164 VAL 164 530 530 VAL VAL C . n A 1 165 GLN 165 531 531 GLN GLN C . n A 1 166 ILE 166 532 532 ILE ILE C . n A 1 167 ASN 167 533 533 ASN ASN C . n A 1 168 PHE 168 534 534 PHE PHE C . n A 1 169 PHE 169 535 535 PHE PHE C . n A 1 170 GLN 170 536 536 GLN GLN C . n A 1 171 ASP 171 537 537 ASP ASP C . n A 1 172 HIS 172 538 538 HIS HIS C . n A 1 173 THR 173 539 539 THR THR C . n A 1 174 LYS 174 540 540 LYS LYS C . n A 1 175 LEU 175 541 541 LEU LEU C . n A 1 176 ILE 176 542 542 ILE ILE C . n A 1 177 LEU 177 543 543 LEU LEU C . n A 1 178 CYS 178 544 544 CYS CYS C . n A 1 179 PRO 179 545 545 PRO PRO C . n A 1 180 LEU 180 546 546 LEU LEU C . n A 1 181 MET 181 547 547 MET MET C . n A 1 182 ALA 182 548 548 ALA ALA C . n A 1 183 ALA 183 549 549 ALA ALA C . n A 1 184 VAL 184 550 550 VAL VAL C . n A 1 185 THR 185 551 551 THR THR C . n A 1 186 TYR 186 552 552 TYR TYR C . n A 1 187 ILE 187 553 553 ILE ILE C . n A 1 188 ASN 188 554 554 ASN ASN C . n A 1 189 GLU 189 555 555 GLU GLU C . n A 1 190 LYS 190 556 556 LYS LYS C . n A 1 191 ARG 191 557 557 ARG ARG C . n A 1 192 ASP 192 558 558 ASP ASP C . n A 1 193 PHE 193 559 559 PHE PHE C . n A 1 194 GLN 194 560 560 GLN GLN C . n A 1 195 THR 195 561 561 THR THR C . n A 1 196 TYR 196 562 562 TYR TYR C . n A 1 197 ARG 197 563 563 ARG ARG C . n A 1 198 LEU 198 564 564 LEU LEU C . n A 1 199 SER 199 565 565 SER SER C . n A 1 200 LEU 200 566 566 LEU LEU C . n A 1 201 LEU 201 567 567 LEU LEU C . n A 1 202 GLU 202 568 568 GLU GLU C . n A 1 203 GLU 203 569 569 GLU GLU C . n A 1 204 TYR 204 570 570 TYR TYR C . n A 1 205 GLY 205 571 571 GLY GLY C . n A 1 206 CYS 206 572 572 CYS CYS C . n A 1 207 CYS 207 573 573 CYS CYS C . n A 1 208 LYS 208 574 574 LYS LYS C . n A 1 209 GLU 209 575 575 GLU GLU C . n A 1 210 LEU 210 576 576 LEU LEU C . n A 1 211 ALA 211 577 577 ALA ALA C . n A 1 212 SER 212 578 578 SER SER C . n A 1 213 ARG 213 579 579 ARG ARG C . n A 1 214 LEU 214 580 580 LEU LEU C . n A 1 215 ARG 215 581 581 ARG ARG C . n A 1 216 TYR 216 582 582 TYR TYR C . n A 1 217 ALA 217 583 583 ALA ALA C . n A 1 218 ARG 218 584 584 ARG ARG C . n A 1 219 THR 219 585 585 THR THR C . n A 1 220 MET 220 586 586 MET MET C . n A 1 221 VAL 221 587 587 VAL VAL C . n A 1 222 ASP 222 588 588 ASP ASP C . n A 1 223 LYS 223 589 589 LYS LYS C . n A 1 224 LEU 224 590 590 LEU LEU C . n A 1 225 LEU 225 591 591 LEU LEU C . n A 1 226 SER 226 592 592 SER SER C . n A 1 227 SER 227 593 593 SER SER C . n A 1 228 ARG 228 594 594 ARG ARG C . n A 1 229 SER 229 595 595 SER SER C . n A 1 230 ALA 230 596 596 ALA ALA C . n A 1 231 SER 231 597 597 SER SER C . n A 1 232 ASN 232 598 598 ASN ASN C . n A 1 233 ARG 233 599 599 ARG ARG C . n A 1 234 LEU 234 600 600 LEU LEU C . n A 1 235 LYS 235 601 601 LYS LYS C . n A 1 236 ALA 236 602 ? ? ? C . n A 1 237 SER 237 603 ? ? ? C . n B 2 1 SER 1 146 ? ? ? D . n B 2 2 PRO 2 147 ? ? ? D . n B 2 3 LEU 3 148 148 LEU LEU D . n B 2 4 VAL 4 149 149 VAL VAL D . n B 2 5 THR 5 150 150 THR THR D . n B 2 6 SER 6 151 151 SER SER D . n B 2 7 TPO 7 152 152 TPO TPO D . n B 2 8 ILE 8 153 153 ILE ILE D . n B 2 9 LYS 9 154 154 LYS LYS D . n B 2 10 THR 10 155 155 THR THR D . n B 2 11 GLU 11 156 ? ? ? D . n B 2 12 ASP 12 157 157 ASP ASP D . n B 2 13 VAL 13 158 158 VAL VAL D . n B 2 14 VAL 14 159 159 VAL VAL D . n B 2 15 SER 15 160 ? ? ? D . n B 2 16 ASN 16 161 ? ? ? D . n B 2 17 SER 17 162 ? ? ? D . n B 2 18 GLN 18 163 ? ? ? D . n B 2 19 ASN 19 164 ? ? ? D . n B 2 20 SER 20 165 ? ? ? D . n B 2 21 ARG 21 166 ? ? ? D . n B 2 22 LEU 22 167 ? ? ? D . n B 2 23 HIS 23 168 ? ? ? D . n B 2 24 PHE 24 169 ? ? ? D . n B 2 25 SER 25 170 ? ? ? D . n B 2 26 GLN 26 171 ? ? ? D . n B 2 27 HIS 27 172 ? ? ? D . n B 2 28 LYS 28 173 ? ? ? D . n B 2 29 THR 29 174 ? ? ? D . n B 2 30 SER 30 175 ? ? ? D . n B 2 31 TPO 31 176 ? ? ? D . n B 2 32 ILE 32 177 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NI 1 701 1 NI NI C . D 3 NI 1 702 2 NI NI C . E 3 NI 1 703 3 NI NI C . F 4 HOH 1 801 35 HOH HOH C . F 4 HOH 2 802 15 HOH HOH C . F 4 HOH 3 803 30 HOH HOH C . F 4 HOH 4 804 25 HOH HOH C . F 4 HOH 5 805 4 HOH HOH C . F 4 HOH 6 806 24 HOH HOH C . F 4 HOH 7 807 20 HOH HOH C . F 4 HOH 8 808 22 HOH HOH C . F 4 HOH 9 809 3 HOH HOH C . F 4 HOH 10 810 6 HOH HOH C . F 4 HOH 11 811 2 HOH HOH C . F 4 HOH 12 812 29 HOH HOH C . F 4 HOH 13 813 19 HOH HOH C . F 4 HOH 14 814 10 HOH HOH C . F 4 HOH 15 815 17 HOH HOH C . F 4 HOH 16 816 26 HOH HOH C . F 4 HOH 17 817 36 HOH HOH C . F 4 HOH 18 818 9 HOH HOH C . F 4 HOH 19 819 13 HOH HOH C . F 4 HOH 20 820 38 HOH HOH C . F 4 HOH 21 821 23 HOH HOH C . F 4 HOH 22 822 8 HOH HOH C . F 4 HOH 23 823 18 HOH HOH C . F 4 HOH 24 824 28 HOH HOH C . F 4 HOH 25 825 11 HOH HOH C . F 4 HOH 26 826 34 HOH HOH C . F 4 HOH 27 827 37 HOH HOH C . F 4 HOH 28 828 14 HOH HOH C . F 4 HOH 29 829 27 HOH HOH C . F 4 HOH 30 830 33 HOH HOH C . F 4 HOH 31 831 12 HOH HOH C . F 4 HOH 32 832 31 HOH HOH C . F 4 HOH 33 833 16 HOH HOH C . F 4 HOH 34 834 32 HOH HOH C . F 4 HOH 35 835 7 HOH HOH C . F 4 HOH 36 836 21 HOH HOH C . G 4 HOH 1 201 5 HOH HOH D . G 4 HOH 2 202 1 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id TPO _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id D _pdbx_struct_mod_residue.auth_comp_id TPO _pdbx_struct_mod_residue.auth_seq_id 152 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1740 ? 1 MORE -22 ? 1 'SSA (A^2)' 12590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 102 ? C HIS 468 ? 1_555 NI ? E NI . ? C NI 703 ? 1_555 O ? F HOH . ? C HOH 802 ? 1_555 62.1 ? 2 NE2 ? A HIS 123 ? C HIS 489 ? 1_555 NI ? C NI . ? C NI 701 ? 1_555 O ? F HOH . ? C HOH 825 ? 1_555 87.1 ? 3 NE2 ? A HIS 123 ? C HIS 489 ? 1_555 NI ? C NI . ? C NI 701 ? 1_555 O ? F HOH . ? C HOH 834 ? 1_555 155.0 ? 4 O ? F HOH . ? C HOH 825 ? 1_555 NI ? C NI . ? C NI 701 ? 1_555 O ? F HOH . ? C HOH 834 ? 1_555 68.2 ? 5 NE2 ? A HIS 123 ? C HIS 489 ? 1_555 NI ? C NI . ? C NI 701 ? 1_555 O ? F HOH . ? C HOH 832 ? 1_455 124.4 ? 6 O ? F HOH . ? C HOH 825 ? 1_555 NI ? C NI . ? C NI 701 ? 1_555 O ? F HOH . ? C HOH 832 ? 1_455 139.4 ? 7 O ? F HOH . ? C HOH 834 ? 1_555 NI ? C NI . ? C NI 701 ? 1_555 O ? F HOH . ? C HOH 832 ? 1_455 76.5 ? 8 NE2 ? A HIS 172 ? C HIS 538 ? 1_555 NI ? D NI . ? C NI 702 ? 1_555 O ? F HOH . ? C HOH 818 ? 1_555 88.3 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-10-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1688 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C HOH 831 ? ? O C HOH 833 ? ? 1.90 2 1 O C HOH 822 ? ? O D HOH 201 ? ? 1.96 3 1 O C ALA 506 ? ? O C HOH 801 ? ? 2.13 4 1 O C HOH 818 ? ? O C HOH 835 ? ? 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C C LYS 388 ? ? N C PRO 389 ? ? CA C PRO 389 ? ? 129.81 119.30 10.51 1.50 Y 2 1 N C GLY 393 ? ? CA C GLY 393 ? ? C C GLY 393 ? ? 97.95 113.10 -15.15 2.50 N 3 1 N C GLU 504 ? ? CA C GLU 504 ? ? C C GLU 504 ? ? 93.49 111.00 -17.51 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU C 391 ? ? -118.00 65.80 2 1 ARG C 396 ? ? -119.71 50.77 3 1 TYR C 421 ? ? 78.65 -53.27 4 1 ASP C 449 ? ? -140.10 -38.15 5 1 GLU C 460 ? ? 60.56 121.38 6 1 ASP C 503 ? ? 10.32 69.64 7 1 LEU C 505 ? ? 78.84 148.76 8 1 ARG C 507 ? ? 45.31 3.43 9 1 LEU C 508 ? ? 68.37 143.14 10 1 SER C 595 ? ? -69.05 -174.50 11 1 LYS D 154 ? ? 113.36 116.60 12 1 VAL D 158 ? ? -147.88 51.02 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C GLN 379 ? CD ? A GLN 13 CD 2 1 Y 1 C GLN 379 ? OE1 ? A GLN 13 OE1 3 1 Y 1 C GLN 379 ? NE2 ? A GLN 13 NE2 4 1 Y 1 C GLU 398 ? CG ? A GLU 32 CG 5 1 Y 1 C GLU 398 ? CD ? A GLU 32 CD 6 1 Y 1 C GLU 398 ? OE1 ? A GLU 32 OE1 7 1 Y 1 C GLU 398 ? OE2 ? A GLU 32 OE2 8 1 Y 1 C ARG 456 ? CG ? A ARG 90 CG 9 1 Y 1 C ARG 456 ? CD ? A ARG 90 CD 10 1 Y 1 C ARG 456 ? NE ? A ARG 90 NE 11 1 Y 1 C ARG 456 ? CZ ? A ARG 90 CZ 12 1 Y 1 C ARG 456 ? NH1 ? A ARG 90 NH1 13 1 Y 1 C ARG 456 ? NH2 ? A ARG 90 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C ASN 367 ? A ASN 1 2 1 Y 1 C GLU 368 ? A GLU 2 3 1 Y 1 C ALA 369 ? A ALA 3 4 1 Y 1 C ILE 370 ? A ILE 4 5 1 Y 1 C GLU 371 ? A GLU 5 6 1 Y 1 C ALA 602 ? A ALA 236 7 1 Y 1 C SER 603 ? A SER 237 8 1 Y 1 D SER 146 ? B SER 1 9 1 Y 1 D PRO 147 ? B PRO 2 10 1 Y 1 D GLU 156 ? B GLU 11 11 1 Y 1 D SER 160 ? B SER 15 12 1 Y 1 D ASN 161 ? B ASN 16 13 1 Y 1 D SER 162 ? B SER 17 14 1 Y 1 D GLN 163 ? B GLN 18 15 1 Y 1 D ASN 164 ? B ASN 19 16 1 Y 1 D SER 165 ? B SER 20 17 1 Y 1 D ARG 166 ? B ARG 21 18 1 Y 1 D LEU 167 ? B LEU 22 19 1 Y 1 D HIS 168 ? B HIS 23 20 1 Y 1 D PHE 169 ? B PHE 24 21 1 Y 1 D SER 170 ? B SER 25 22 1 Y 1 D GLN 171 ? B GLN 26 23 1 Y 1 D HIS 172 ? B HIS 27 24 1 Y 1 D LYS 173 ? B LYS 28 25 1 Y 1 D THR 174 ? B THR 29 26 1 Y 1 D SER 175 ? B SER 30 27 1 Y 1 D TPO 176 ? B TPO 31 28 1 Y 1 D ILE 177 ? B ILE 32 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'NICKEL (II) ION' NI 4 water HOH #