HEADER TRANSFERASE/METAL BINDING PROTEIN 09-SEP-15 5DMV TITLE POLO-BOX DOMAIN OF MOUSE POLO-LIKE KINASE 1 COMPLEXED WITH EMI2 (146- TITLE 2 177) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PLK1; COMPND 3 CHAIN: C; COMPND 4 FRAGMENT: UNP RESIDUES 367-603; COMPND 5 SYNONYM: POLO-LIKE KINASE 1,PLK-1,SERINE/THREONINE-PROTEIN KINASE 13, COMPND 6 STPK13; COMPND 7 EC: 2.7.11.21; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: F-BOX ONLY PROTEIN 43; COMPND 11 CHAIN: D; COMPND 12 FRAGMENT: EMI2 PEPTIDE (UNP RESIDUES 146-177); COMPND 13 SYNONYM: ENDOGENOUS MEIOTIC INHIBITOR 2; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PLK1, PLK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS POLO-BOX, PLK1, EMI2, MEIOSIS, TRANSFERASE-METAL BINDING PROTEIN KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.NAMGOONG REVDAT 1 28-OCT-15 5DMV 0 JRNL AUTH J.L.JIA,Y.H.HAN,H.C.KIM,M.AHN,J.W.KWON,Y.LUO,P.GUNASEKARAN, JRNL AUTH 2 S.J.LEE,K.S.LEE,J.K.BANG,N.H.KIM,S.NAMGOONG JRNL TITL STRUCTURAL BASIS FOR RECOGNITION OF EMI2 BY POLO-LIKE KINASE JRNL TITL 2 1 AND DEVELOPMENT OF PEPTIDOMIMETICS BLOCKING OOCYTE JRNL TITL 3 MATURATION AND FERTILIZATION. JRNL REF SCI REP V. 5 14626 2015 JRNL REFN ESSN 2045-2322 JRNL PMID 26459104 JRNL DOI 10.1038/SREP14626 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1688 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 8266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4163 - 3.6030 0.96 2703 143 0.1975 0.2908 REMARK 3 2 3.6030 - 2.8606 0.97 2678 141 0.2241 0.2679 REMARK 3 3 2.8606 - 2.4993 0.90 2471 130 0.2354 0.3304 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1973 REMARK 3 ANGLE : 1.975 2673 REMARK 3 CHIRALITY : 0.090 307 REMARK 3 PLANARITY : 0.011 335 REMARK 3 DIHEDRAL : 14.061 733 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DMV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8266 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.499 REMARK 200 RESOLUTION RANGE LOW (A) : 28.414 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.43800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM MGCL2, 5MM NICL2, 15% PEG 3350, REMARK 280 0.1 M HEPES, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.66450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN C 367 REMARK 465 GLU C 368 REMARK 465 ALA C 369 REMARK 465 ILE C 370 REMARK 465 GLU C 371 REMARK 465 ALA C 602 REMARK 465 SER C 603 REMARK 465 SER D 146 REMARK 465 PRO D 147 REMARK 465 GLU D 156 REMARK 465 SER D 160 REMARK 465 ASN D 161 REMARK 465 SER D 162 REMARK 465 GLN D 163 REMARK 465 ASN D 164 REMARK 465 SER D 165 REMARK 465 ARG D 166 REMARK 465 LEU D 167 REMARK 465 HIS D 168 REMARK 465 PHE D 169 REMARK 465 SER D 170 REMARK 465 GLN D 171 REMARK 465 HIS D 172 REMARK 465 LYS D 173 REMARK 465 THR D 174 REMARK 465 SER D 175 REMARK 465 TPO D 176 REMARK 465 ILE D 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN C 379 CD OE1 NE2 REMARK 470 GLU C 398 CG CD OE1 OE2 REMARK 470 ARG C 456 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 831 O HOH C 833 1.90 REMARK 500 O HOH C 822 O HOH D 201 1.96 REMARK 500 O ALA C 506 O HOH C 801 2.13 REMARK 500 O HOH C 818 O HOH C 835 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 389 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 GLY C 393 N - CA - C ANGL. DEV. = -15.2 DEGREES REMARK 500 GLU C 504 N - CA - C ANGL. DEV. = -17.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU C 391 65.80 -118.00 REMARK 500 ARG C 396 50.77 -119.71 REMARK 500 TYR C 421 -53.27 78.65 REMARK 500 ASP C 449 -38.15 -140.10 REMARK 500 GLU C 460 121.38 60.56 REMARK 500 ASP C 503 69.64 10.32 REMARK 500 LEU C 505 148.76 78.84 REMARK 500 ARG C 507 3.43 45.31 REMARK 500 LEU C 508 143.14 68.37 REMARK 500 SER C 595 -174.50 -69.05 REMARK 500 LYS D 154 116.60 113.36 REMARK 500 VAL D 158 51.02 -147.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C 703 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 468 NE2 REMARK 620 2 HOH C 802 O 62.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C 701 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 489 NE2 REMARK 620 2 HOH C 825 O 87.1 REMARK 620 3 HOH C 834 O 155.0 68.2 REMARK 620 4 HOH C 832 O 124.4 139.4 76.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C 702 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 538 NE2 REMARK 620 2 HOH C 818 O 88.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI C 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI C 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DMS RELATED DB: PDB DBREF 5DMV C 367 603 UNP Q07832 PLK1_MOUSE 367 603 DBREF 5DMV D 146 177 UNP Q8CDI2 FBX43_MOUSE 146 177 SEQRES 1 C 237 ASN GLU ALA ILE GLU CYS HIS LEU SER ASP LEU LEU GLN SEQRES 2 C 237 GLN LEU THR SER VAL ASN ALA SER LYS PRO SER GLU ARG SEQRES 3 C 237 GLY LEU VAL ARG GLN GLU GLU ALA GLU ASP PRO ALA CYS SEQRES 4 C 237 ILE PRO ILE PHE TRP VAL SER LYS TRP VAL ASP TYR SER SEQRES 5 C 237 ASP LYS TYR GLY LEU GLY TYR GLN LEU CYS ASP ASN SER SEQRES 6 C 237 VAL GLY VAL LEU PHE ASN ASP SER THR ARG LEU ILE LEU SEQRES 7 C 237 TYR ASN ASP GLY ASP SER LEU GLN TYR ILE GLU ARG ASP SEQRES 8 C 237 GLY THR GLU SER TYR LEU THR VAL SER SER HIS PRO ASN SEQRES 9 C 237 SER LEU MET LYS LYS ILE THR LEU LEU ASN TYR PHE ARG SEQRES 10 C 237 ASN TYR MET SER GLU HIS LEU LEU LYS ALA GLY ALA ASN SEQRES 11 C 237 ILE THR PRO ARG GLU GLY ASP GLU LEU ALA ARG LEU PRO SEQRES 12 C 237 TYR LEU ARG THR TRP PHE ARG THR ARG SER ALA ILE ILE SEQRES 13 C 237 LEU HIS LEU SER ASN GLY THR VAL GLN ILE ASN PHE PHE SEQRES 14 C 237 GLN ASP HIS THR LYS LEU ILE LEU CYS PRO LEU MET ALA SEQRES 15 C 237 ALA VAL THR TYR ILE ASN GLU LYS ARG ASP PHE GLN THR SEQRES 16 C 237 TYR ARG LEU SER LEU LEU GLU GLU TYR GLY CYS CYS LYS SEQRES 17 C 237 GLU LEU ALA SER ARG LEU ARG TYR ALA ARG THR MET VAL SEQRES 18 C 237 ASP LYS LEU LEU SER SER ARG SER ALA SER ASN ARG LEU SEQRES 19 C 237 LYS ALA SER SEQRES 1 D 32 SER PRO LEU VAL THR SER TPO ILE LYS THR GLU ASP VAL SEQRES 2 D 32 VAL SER ASN SER GLN ASN SER ARG LEU HIS PHE SER GLN SEQRES 3 D 32 HIS LYS THR SER TPO ILE MODRES 5DMV TPO D 152 THR MODIFIED RESIDUE HET TPO D 152 11 HET NI C 701 1 HET NI C 702 1 HET NI C 703 1 HETNAM TPO PHOSPHOTHREONINE HETNAM NI NICKEL (II) ION HETSYN TPO PHOSPHONOTHREONINE FORMUL 2 TPO C4 H10 N O6 P FORMUL 3 NI 3(NI 2+) FORMUL 6 HOH *38(H2 O) HELIX 1 AA1 HIS C 373 SER C 387 1 15 HELIX 2 AA2 ARG C 396 GLU C 401 5 6 HELIX 3 AA3 ASP C 402 ILE C 406 5 5 HELIX 4 AA4 PRO C 469 SER C 471 5 3 HELIX 5 AA5 LEU C 472 HIS C 489 1 18 HELIX 6 AA6 LEU C 564 GLY C 571 1 8 HELIX 7 AA7 CYS C 573 SER C 593 1 21 SHEET 1 AA1 6 VAL C 411 TYR C 417 0 SHEET 2 AA1 6 GLY C 422 LEU C 427 -1 O GLY C 424 N VAL C 415 SHEET 3 AA1 6 VAL C 432 PHE C 436 -1 O GLY C 433 N TYR C 425 SHEET 4 AA1 6 ARG C 441 LEU C 444 -1 O LEU C 444 N VAL C 432 SHEET 5 AA1 6 SER C 450 ILE C 454 -1 O GLN C 452 N ILE C 443 SHEET 6 AA1 6 SER C 461 THR C 464 -1 O SER C 461 N TYR C 453 SHEET 1 AA2 6 LEU C 511 ARG C 516 0 SHEET 2 AA2 6 ALA C 520 LEU C 525 -1 O ILE C 522 N PHE C 515 SHEET 3 AA2 6 VAL C 530 PHE C 534 -1 O GLN C 531 N LEU C 523 SHEET 4 AA2 6 LYS C 540 CYS C 544 -1 O LEU C 541 N ILE C 532 SHEET 5 AA2 6 ALA C 549 ILE C 553 -1 O THR C 551 N ILE C 542 SHEET 6 AA2 6 PHE C 559 ARG C 563 -1 O TYR C 562 N VAL C 550 LINK NE2 HIS C 468 NI NI C 703 1555 1555 2.33 LINK NE2 HIS C 489 NI NI C 701 1555 1555 2.38 LINK NE2 HIS C 538 NI NI C 702 1555 1555 2.13 LINK C SER D 151 N TPO D 152 1555 1555 1.32 LINK C TPO D 152 N ILE D 153 1555 1555 1.32 LINK NI NI C 701 O HOH C 825 1555 1555 1.91 LINK NI NI C 701 O HOH C 834 1555 1555 2.20 LINK NI NI C 702 O HOH C 818 1555 1555 1.90 LINK NI NI C 703 O HOH C 802 1555 1555 1.93 LINK NI NI C 701 O HOH C 832 1555 1455 1.96 CISPEP 1 GLY C 502 ASP C 503 0 23.33 CISPEP 2 LEU C 505 ALA C 506 0 -4.41 CISPEP 3 ASP D 157 VAL D 158 0 -20.17 SITE 1 AC1 4 HIS C 489 HOH C 825 HOH C 832 HOH C 834 SITE 1 AC2 2 HIS C 538 HOH C 818 SITE 1 AC3 2 HIS C 468 HOH C 802 CRYST1 35.627 63.329 56.831 90.00 97.20 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028069 0.000000 0.003545 0.00000 SCALE2 0.000000 0.015791 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017736 0.00000