data_5DP8 # _entry.id 5DP8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DP8 pdb_00005dp8 10.2210/pdb5dp8/pdb WWPDB D_1000213597 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-30 2 'Structure model' 1 1 2016-04-06 3 'Structure model' 1 2 2017-09-27 4 'Structure model' 1 3 2023-11-08 5 'Structure model' 1 4 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' diffrn_detector 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_diffrn_detector.detector' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DP8 _pdbx_database_status.recvd_initial_deposition_date 2015-09-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5DP3 unspecified PDB . 5DP4 unspecified PDB . 5DP5 unspecified PDB . 5DP6 unspecified PDB . 5DP7 unspecified PDB . 5DP9 unspecified PDB . 5DPA unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, C.' 1 'Zhang, L.' 2 'Li, P.' 3 'Cai, Q.' 4 'Peng, X.' 5 'Li, N.' 6 'Cai, Y.' 7 'Li, J.' 8 'Lin, T.' 9 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_id_ASTM BBACAQ _citation.journal_id_CSD 0113 _citation.journal_id_ISSN 0006-3002 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 1860 _citation.language ? _citation.page_first 1299 _citation.page_last 1307 _citation.title 'Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbagen.2016.03.017 _citation.pdbx_database_id_PubMed 26987809 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, C.' 1 ? primary 'Zhang, L.' 2 ? primary 'Li, P.' 3 ? primary 'Cai, Q.' 4 ? primary 'Peng, X.' 5 ? primary 'Yin, K.' 6 ? primary 'Chen, X.' 7 ? primary 'Ren, H.' 8 ? primary 'Zhong, S.' 9 ? primary 'Weng, Y.' 10 ? primary 'Guan, Y.' 11 ? primary 'Chen, S.' 12 ? primary 'Wu, J.' 13 ? primary 'Li, J.' 14 ? primary 'Lin, T.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '3C proteinase' 21391.482 1 ? ? ? ? 2 non-polymer syn 'ethyl (2Z,4S)-4-[(N-{[(2-cyclopropylethyl)amino](oxo)acetyl}-L-phenylalanyl)amino]-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate' 512.598 1 ? ? ? ? 3 water nat water 18.015 44 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGPSLDFALSLLRRNVRQVQTDQGHFTMLGVRDRLAVLPRHSQPGKTIWIEHKLVNILDAVELVDEQGVNLELTLITLDT NEKFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGGVVTSVGKVIG IHIGGNGRQGFCAGLKRSYFASEQLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGPSLDFALSLLRRNVRQVQTDQGHFTMLGVRDRLAVLPRHSQPGKTIWIEHKLVNILDAVELVDEQGVNLELTLITLDT NEKFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGGVVTSVGKVIG IHIGGNGRQGFCAGLKRSYFASEQLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ethyl (2Z,4S)-4-[(N-{[(2-cyclopropylethyl)amino](oxo)acetyl}-L-phenylalanyl)amino]-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate' 5ED 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 PRO n 1 4 SER n 1 5 LEU n 1 6 ASP n 1 7 PHE n 1 8 ALA n 1 9 LEU n 1 10 SER n 1 11 LEU n 1 12 LEU n 1 13 ARG n 1 14 ARG n 1 15 ASN n 1 16 VAL n 1 17 ARG n 1 18 GLN n 1 19 VAL n 1 20 GLN n 1 21 THR n 1 22 ASP n 1 23 GLN n 1 24 GLY n 1 25 HIS n 1 26 PHE n 1 27 THR n 1 28 MET n 1 29 LEU n 1 30 GLY n 1 31 VAL n 1 32 ARG n 1 33 ASP n 1 34 ARG n 1 35 LEU n 1 36 ALA n 1 37 VAL n 1 38 LEU n 1 39 PRO n 1 40 ARG n 1 41 HIS n 1 42 SER n 1 43 GLN n 1 44 PRO n 1 45 GLY n 1 46 LYS n 1 47 THR n 1 48 ILE n 1 49 TRP n 1 50 ILE n 1 51 GLU n 1 52 HIS n 1 53 LYS n 1 54 LEU n 1 55 VAL n 1 56 ASN n 1 57 ILE n 1 58 LEU n 1 59 ASP n 1 60 ALA n 1 61 VAL n 1 62 GLU n 1 63 LEU n 1 64 VAL n 1 65 ASP n 1 66 GLU n 1 67 GLN n 1 68 GLY n 1 69 VAL n 1 70 ASN n 1 71 LEU n 1 72 GLU n 1 73 LEU n 1 74 THR n 1 75 LEU n 1 76 ILE n 1 77 THR n 1 78 LEU n 1 79 ASP n 1 80 THR n 1 81 ASN n 1 82 GLU n 1 83 LYS n 1 84 PHE n 1 85 ARG n 1 86 ASP n 1 87 ILE n 1 88 THR n 1 89 LYS n 1 90 PHE n 1 91 ILE n 1 92 PRO n 1 93 GLU n 1 94 ASN n 1 95 ILE n 1 96 SER n 1 97 THR n 1 98 ALA n 1 99 SER n 1 100 ASP n 1 101 ALA n 1 102 THR n 1 103 LEU n 1 104 VAL n 1 105 ILE n 1 106 ASN n 1 107 THR n 1 108 GLU n 1 109 HIS n 1 110 MET n 1 111 PRO n 1 112 SER n 1 113 MET n 1 114 PHE n 1 115 VAL n 1 116 PRO n 1 117 VAL n 1 118 GLY n 1 119 ASP n 1 120 VAL n 1 121 VAL n 1 122 GLN n 1 123 TYR n 1 124 GLY n 1 125 PHE n 1 126 LEU n 1 127 ASN n 1 128 LEU n 1 129 SER n 1 130 GLY n 1 131 LYS n 1 132 PRO n 1 133 THR n 1 134 HIS n 1 135 ARG n 1 136 THR n 1 137 MET n 1 138 MET n 1 139 TYR n 1 140 ASN n 1 141 PHE n 1 142 PRO n 1 143 THR n 1 144 LYS n 1 145 ALA n 1 146 GLY n 1 147 GLN n 1 148 CYS n 1 149 GLY n 1 150 GLY n 1 151 VAL n 1 152 VAL n 1 153 THR n 1 154 SER n 1 155 VAL n 1 156 GLY n 1 157 LYS n 1 158 VAL n 1 159 ILE n 1 160 GLY n 1 161 ILE n 1 162 HIS n 1 163 ILE n 1 164 GLY n 1 165 GLY n 1 166 ASN n 1 167 GLY n 1 168 ARG n 1 169 GLN n 1 170 GLY n 1 171 PHE n 1 172 CYS n 1 173 ALA n 1 174 GLY n 1 175 LEU n 1 176 LYS n 1 177 ARG n 1 178 SER n 1 179 TYR n 1 180 PHE n 1 181 ALA n 1 182 SER n 1 183 GLU n 1 184 GLN n 1 185 LEU n 1 186 GLU n 1 187 HIS n 1 188 HIS n 1 189 HIS n 1 190 HIS n 1 191 HIS n 1 192 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 192 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterovirus A71' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 39054 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5ED non-polymer . 'ethyl (2Z,4S)-4-[(N-{[(2-cyclopropylethyl)amino](oxo)acetyl}-L-phenylalanyl)amino]-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate' ? 'C27 H36 N4 O6' 512.598 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 GLY 2 1 1 GLY GLY A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 ASP 6 5 5 ASP ASP A . n A 1 7 PHE 7 6 6 PHE PHE A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 ARG 13 12 12 ARG ARG A . n A 1 14 ARG 14 13 13 ARG ARG A . n A 1 15 ASN 15 14 14 ASN ASN A . n A 1 16 VAL 16 15 15 VAL VAL A . n A 1 17 ARG 17 16 16 ARG ARG A . n A 1 18 GLN 18 17 17 GLN GLN A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 GLY 24 23 23 GLY GLY A . n A 1 25 HIS 25 24 24 HIS HIS A . n A 1 26 PHE 26 25 25 PHE PHE A . n A 1 27 THR 27 26 26 THR THR A . n A 1 28 MET 28 27 27 MET MET A . n A 1 29 LEU 29 28 28 LEU LEU A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 ARG 34 33 33 ARG ARG A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 PRO 39 38 38 PRO PRO A . n A 1 40 ARG 40 39 39 ARG ARG A . n A 1 41 HIS 41 40 40 HIS HIS A . n A 1 42 SER 42 41 41 SER SER A . n A 1 43 GLN 43 42 42 GLN GLN A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 TRP 49 48 48 TRP TRP A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 HIS 52 51 51 HIS HIS A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 ASN 56 55 55 ASN ASN A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 ASP 59 58 58 ASP ASP A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 VAL 61 60 60 VAL VAL A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 ASP 65 64 64 ASP ASP A . n A 1 66 GLU 66 65 65 GLU GLU A . n A 1 67 GLN 67 66 66 GLN GLN A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 ASN 70 69 69 ASN ASN A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 GLU 72 71 71 GLU GLU A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 THR 77 76 76 THR THR A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 THR 80 79 79 THR THR A . n A 1 81 ASN 81 80 80 ASN ASN A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 LYS 83 82 82 LYS LYS A . n A 1 84 PHE 84 83 83 PHE PHE A . n A 1 85 ARG 85 84 84 ARG ARG A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 ILE 87 86 86 ILE ILE A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 PHE 90 89 89 PHE PHE A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 PRO 92 91 91 PRO PRO A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 ASN 94 93 93 ASN ASN A . n A 1 95 ILE 95 94 94 ILE ILE A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 THR 97 96 96 THR THR A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 ASN 106 105 105 ASN ASN A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 HIS 109 108 108 HIS HIS A . n A 1 110 MET 110 109 109 MET MET A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 SER 112 111 111 SER SER A . n A 1 113 MET 113 112 112 MET MET A . n A 1 114 PHE 114 113 113 PHE PHE A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 PRO 116 115 115 PRO PRO A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 GLY 118 117 117 GLY GLY A . n A 1 119 ASP 119 118 118 ASP ASP A . n A 1 120 VAL 120 119 119 VAL VAL A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 GLN 122 121 121 GLN GLN A . n A 1 123 TYR 123 122 122 TYR TYR A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 PHE 125 124 124 PHE PHE A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 ASN 127 126 126 ASN ASN A . n A 1 128 LEU 128 127 127 LEU LEU A . n A 1 129 SER 129 128 128 SER SER A . n A 1 130 GLY 130 129 129 GLY GLY A . n A 1 131 LYS 131 130 130 LYS LYS A . n A 1 132 PRO 132 131 131 PRO PRO A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 HIS 134 133 133 HIS HIS A . n A 1 135 ARG 135 134 134 ARG ARG A . n A 1 136 THR 136 135 135 THR THR A . n A 1 137 MET 137 136 136 MET MET A . n A 1 138 MET 138 137 137 MET MET A . n A 1 139 TYR 139 138 138 TYR TYR A . n A 1 140 ASN 140 139 139 ASN ASN A . n A 1 141 PHE 141 140 140 PHE PHE A . n A 1 142 PRO 142 141 141 PRO PRO A . n A 1 143 THR 143 142 142 THR THR A . n A 1 144 LYS 144 143 143 LYS LYS A . n A 1 145 ALA 145 144 144 ALA ALA A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 GLN 147 146 146 GLN GLN A . n A 1 148 CYS 148 147 147 CYS CYS A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 GLY 150 149 149 GLY GLY A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 VAL 152 151 151 VAL VAL A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 SER 154 153 153 SER SER A . n A 1 155 VAL 155 154 154 VAL VAL A . n A 1 156 GLY 156 155 155 GLY GLY A . n A 1 157 LYS 157 156 156 LYS LYS A . n A 1 158 VAL 158 157 157 VAL VAL A . n A 1 159 ILE 159 158 158 ILE ILE A . n A 1 160 GLY 160 159 159 GLY GLY A . n A 1 161 ILE 161 160 160 ILE ILE A . n A 1 162 HIS 162 161 161 HIS HIS A . n A 1 163 ILE 163 162 162 ILE ILE A . n A 1 164 GLY 164 163 163 GLY GLY A . n A 1 165 GLY 165 164 164 GLY GLY A . n A 1 166 ASN 166 165 165 ASN ASN A . n A 1 167 GLY 167 166 166 GLY GLY A . n A 1 168 ARG 168 167 167 ARG ARG A . n A 1 169 GLN 169 168 168 GLN GLN A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 PHE 171 170 170 PHE PHE A . n A 1 172 CYS 172 171 171 CYS CYS A . n A 1 173 ALA 173 172 172 ALA ALA A . n A 1 174 GLY 174 173 173 GLY GLY A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 ARG 177 176 176 ARG ARG A . n A 1 178 SER 178 177 177 SER SER A . n A 1 179 TYR 179 178 178 TYR TYR A . n A 1 180 PHE 180 179 179 PHE PHE A . n A 1 181 ALA 181 180 180 ALA ALA A . n A 1 182 SER 182 181 ? ? ? A . n A 1 183 GLU 183 182 ? ? ? A . n A 1 184 GLN 184 183 ? ? ? A . n A 1 185 LEU 185 184 ? ? ? A . n A 1 186 GLU 186 185 ? ? ? A . n A 1 187 HIS 187 186 ? ? ? A . n A 1 188 HIS 188 187 ? ? ? A . n A 1 189 HIS 189 188 ? ? ? A . n A 1 190 HIS 190 189 ? ? ? A . n A 1 191 HIS 191 190 ? ? ? A . n A 1 192 HIS 192 191 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5ED 1 201 1 5ED 337 A . C 3 HOH 1 301 43 HOH HOH A . C 3 HOH 2 302 18 HOH HOH A . C 3 HOH 3 303 19 HOH HOH A . C 3 HOH 4 304 34 HOH HOH A . C 3 HOH 5 305 22 HOH HOH A . C 3 HOH 6 306 11 HOH HOH A . C 3 HOH 7 307 26 HOH HOH A . C 3 HOH 8 308 20 HOH HOH A . C 3 HOH 9 309 35 HOH HOH A . C 3 HOH 10 310 13 HOH HOH A . C 3 HOH 11 311 21 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 24 HOH HOH A . C 3 HOH 14 314 25 HOH HOH A . C 3 HOH 15 315 9 HOH HOH A . C 3 HOH 16 316 32 HOH HOH A . C 3 HOH 17 317 6 HOH HOH A . C 3 HOH 18 318 8 HOH HOH A . C 3 HOH 19 319 40 HOH HOH A . C 3 HOH 20 320 1 HOH HOH A . C 3 HOH 21 321 7 HOH HOH A . C 3 HOH 22 322 23 HOH HOH A . C 3 HOH 23 323 14 HOH HOH A . C 3 HOH 24 324 4 HOH HOH A . C 3 HOH 25 325 39 HOH HOH A . C 3 HOH 26 326 36 HOH HOH A . C 3 HOH 27 327 44 HOH HOH A . C 3 HOH 28 328 16 HOH HOH A . C 3 HOH 29 329 10 HOH HOH A . C 3 HOH 30 330 33 HOH HOH A . C 3 HOH 31 331 27 HOH HOH A . C 3 HOH 32 332 17 HOH HOH A . C 3 HOH 33 333 5 HOH HOH A . C 3 HOH 34 334 2 HOH HOH A . C 3 HOH 35 335 3 HOH HOH A . C 3 HOH 36 336 42 HOH HOH A . C 3 HOH 37 337 41 HOH HOH A . C 3 HOH 38 338 38 HOH HOH A . C 3 HOH 39 339 30 HOH HOH A . C 3 HOH 40 340 28 HOH HOH A . C 3 HOH 41 341 31 HOH HOH A . C 3 HOH 42 342 37 HOH HOH A . C 3 HOH 43 343 15 HOH HOH A . C 3 HOH 44 344 29 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 # _cell.entry_id 5DP8 _cell.length_a 63.945 _cell.length_b 64.976 _cell.length_c 75.606 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DP8 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DP8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 32.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Tris, 25% PEG4000, 0.8M lithium chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details mirrors _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-08-29 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Ni FILTER' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DP8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5870 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.4 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 95.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5DP8 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 5870 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.03 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 96.07 _refine.ls_R_factor_obs 0.21137 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20830 _refine.ls_R_factor_R_free 0.27577 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 290 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.893 _refine.B_iso_mean 37.288 _refine.aniso_B[1][1] -1.11 _refine.aniso_B[2][2] 3.69 _refine.aniso_B[3][3] -2.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.pdbx_starting_model 4GHQ _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.342 _refine.overall_SU_ML 0.253 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.189 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1401 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 1482 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 39.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.criterion _refine_ls_restr.rejects r_bond_refined_d 0.012 0.019 ? 1468 'X-RAY DIFFRACTION' ? ? ? r_bond_other_d 0.001 0.020 ? 1436 'X-RAY DIFFRACTION' ? ? ? r_angle_refined_deg 1.690 1.985 ? 1987 'X-RAY DIFFRACTION' ? ? ? r_angle_other_deg 0.970 3.000 ? 3296 'X-RAY DIFFRACTION' ? ? ? r_dihedral_angle_1_deg 6.551 5.000 ? 180 'X-RAY DIFFRACTION' ? ? ? r_dihedral_angle_2_deg 39.315 23.710 ? 62 'X-RAY DIFFRACTION' ? ? ? r_dihedral_angle_3_deg 16.790 15.000 ? 247 'X-RAY DIFFRACTION' ? ? ? r_dihedral_angle_4_deg 20.096 15.000 ? 10 'X-RAY DIFFRACTION' ? ? ? r_chiral_restr 0.084 0.200 ? 228 'X-RAY DIFFRACTION' ? ? ? r_gen_planes_refined 0.006 0.021 ? 1648 'X-RAY DIFFRACTION' ? ? ? r_gen_planes_other 0.001 0.020 ? 342 'X-RAY DIFFRACTION' ? ? ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_mcbond_it 2.660 3.601 ? 723 'X-RAY DIFFRACTION' ? ? ? r_mcbond_other 2.661 3.599 ? 722 'X-RAY DIFFRACTION' ? ? ? r_mcangle_it 4.222 5.389 ? 902 'X-RAY DIFFRACTION' ? ? ? r_mcangle_other 4.220 5.391 ? 903 'X-RAY DIFFRACTION' ? ? ? r_scbond_it 2.770 3.909 ? 745 'X-RAY DIFFRACTION' ? ? ? r_scbond_other 2.769 3.912 ? 746 'X-RAY DIFFRACTION' ? ? ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_scangle_other 4.523 5.724 ? 1083 'X-RAY DIFFRACTION' ? ? ? r_long_range_B_refined 8.023 33.997 ? 6063 'X-RAY DIFFRACTION' ? ? ? r_long_range_B_other 8.025 34.002 ? 6058 'X-RAY DIFFRACTION' ? ? ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 432 _refine_ls_shell.R_factor_R_work 0.313 _refine_ls_shell.percent_reflns_obs 99.56 _refine_ls_shell.R_factor_R_free 0.390 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5DP8 _struct.title 'Crystal Structure of EV71 3C Proteinase in complex with compound 8' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DP8 _struct_keywords.text 'Hand, foot and mouth disease, 3C proteinase, peptidomimetics, drug design, rupintrivir, HYDROLASE-HYDROLASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A9XG43_9ENTO _struct_ref.pdbx_db_accession A9XG43 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPSLDFALSLLRRNVRQVQTDQGHFTMLGVRDRLAVLPRHSQPGKTIWIEHKLVNILDAVELVDEQGVNLELTLITLDTN EKFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGGVVTSVGKVIGI HIGGNGRQGFCAGLKRSYFASEQ ; _struct_ref.pdbx_align_begin 1549 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5DP8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 184 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A9XG43 _struct_ref_seq.db_align_beg 1549 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1731 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DP8 MET A 1 ? UNP A9XG43 ? ? 'expression tag' 0 1 1 5DP8 LEU A 185 ? UNP A9XG43 ? ? 'expression tag' 184 2 1 5DP8 GLU A 186 ? UNP A9XG43 ? ? 'expression tag' 185 3 1 5DP8 HIS A 187 ? UNP A9XG43 ? ? 'expression tag' 186 4 1 5DP8 HIS A 188 ? UNP A9XG43 ? ? 'expression tag' 187 5 1 5DP8 HIS A 189 ? UNP A9XG43 ? ? 'expression tag' 188 6 1 5DP8 HIS A 190 ? UNP A9XG43 ? ? 'expression tag' 189 7 1 5DP8 HIS A 191 ? UNP A9XG43 ? ? 'expression tag' 190 8 1 5DP8 HIS A 192 ? UNP A9XG43 ? ? 'expression tag' 191 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 8360 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 2 ? ASN A 15 ? GLY A 1 ASN A 14 1 ? 14 HELX_P HELX_P2 AA2 HIS A 41 ? GLN A 43 ? HIS A 40 GLN A 42 5 ? 3 HELX_P HELX_P3 AA3 ILE A 87 ? ILE A 91 ? ILE A 86 ILE A 90 5 ? 5 HELX_P HELX_P4 AA4 LYS A 176 ? ALA A 181 ? LYS A 175 ALA A 180 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id 5ED _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C14 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 147 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 5ED _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.823 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id 5ED _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 148 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id 5ED _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 201 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 147 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C14 _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id CYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id 5ED _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Covalent chemical modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 16 ? THR A 21 ? VAL A 15 THR A 20 AA1 2 GLY A 24 ? ARG A 32 ? GLY A 23 ARG A 31 AA1 3 LEU A 35 ? PRO A 39 ? LEU A 34 PRO A 38 AA1 4 ASN A 70 ? LEU A 78 ? ASN A 69 LEU A 77 AA1 5 LYS A 53 ? VAL A 64 ? LYS A 52 VAL A 63 AA1 6 THR A 47 ? ILE A 50 ? THR A 46 ILE A 49 AA1 7 VAL A 16 ? THR A 21 ? VAL A 15 THR A 20 AA2 1 ALA A 98 ? ILE A 105 ? ALA A 97 ILE A 104 AA2 2 MET A 113 ? LEU A 128 ? MET A 112 LEU A 127 AA2 3 LYS A 131 ? TYR A 139 ? LYS A 130 TYR A 138 AA2 4 GLY A 170 ? GLY A 174 ? GLY A 169 GLY A 173 AA2 5 LYS A 157 ? GLY A 165 ? LYS A 156 GLY A 164 AA2 6 VAL A 151 ? SER A 154 ? VAL A 150 SER A 153 AA2 7 ALA A 98 ? ILE A 105 ? ALA A 97 ILE A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 17 ? N ARG A 16 O MET A 28 ? O MET A 27 AA1 2 3 N LEU A 29 ? N LEU A 28 O VAL A 37 ? O VAL A 36 AA1 3 4 N ALA A 36 ? N ALA A 35 O ILE A 76 ? O ILE A 75 AA1 4 5 O THR A 77 ? O THR A 76 N LEU A 58 ? N LEU A 57 AA1 5 6 O LYS A 53 ? O LYS A 52 N ILE A 50 ? N ILE A 49 AA1 6 7 O TRP A 49 ? O TRP A 48 N GLN A 20 ? N GLN A 19 AA2 1 2 N ILE A 105 ? N ILE A 104 O MET A 113 ? O MET A 112 AA2 2 3 N LEU A 128 ? N LEU A 127 O LYS A 131 ? O LYS A 130 AA2 3 4 N TYR A 139 ? N TYR A 138 O GLY A 170 ? O GLY A 169 AA2 4 5 O PHE A 171 ? O PHE A 170 N GLY A 164 ? N GLY A 163 AA2 5 6 O GLY A 160 ? O GLY A 159 N VAL A 152 ? N VAL A 151 AA2 6 7 O THR A 153 ? O THR A 152 N THR A 102 ? N THR A 101 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 5ED _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 16 _struct_site.details 'binding site for residue 5ED A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ARG A 40 ? ARG A 39 . ? 1_555 ? 2 AC1 16 HIS A 41 ? HIS A 40 . ? 1_555 ? 3 AC1 16 GLU A 72 ? GLU A 71 . ? 1_555 ? 4 AC1 16 ASN A 127 ? ASN A 126 . ? 1_555 ? 5 AC1 16 LEU A 128 ? LEU A 127 . ? 1_555 ? 6 AC1 16 SER A 129 ? SER A 128 . ? 1_555 ? 7 AC1 16 THR A 143 ? THR A 142 . ? 1_555 ? 8 AC1 16 LYS A 144 ? LYS A 143 . ? 1_555 ? 9 AC1 16 ALA A 145 ? ALA A 144 . ? 1_555 ? 10 AC1 16 GLY A 146 ? GLY A 145 . ? 1_555 ? 11 AC1 16 CYS A 148 ? CYS A 147 . ? 1_555 ? 12 AC1 16 HIS A 162 ? HIS A 161 . ? 1_555 ? 13 AC1 16 ILE A 163 ? ILE A 162 . ? 1_555 ? 14 AC1 16 GLY A 164 ? GLY A 163 . ? 1_555 ? 15 AC1 16 GLY A 165 ? GLY A 164 . ? 1_555 ? 16 AC1 16 HOH C . ? HOH A 326 . ? 1_555 ? # _pdbx_entry_details.entry_id 5DP8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 32 ? ? 48.22 -123.68 2 1 GLU A 50 ? ? 53.42 -69.35 3 1 GLU A 71 ? ? 70.34 31.88 4 1 SER A 111 ? ? 38.73 60.04 5 1 TYR A 122 ? ? -131.67 -49.53 6 1 SER A 153 ? ? -170.11 126.46 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 321 ? C HOH . 2 1 A HOH 335 ? C HOH . 3 1 A HOH 336 ? C HOH . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 344 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.93 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 181 ? A SER 182 2 1 Y 1 A GLU 182 ? A GLU 183 3 1 Y 1 A GLN 183 ? A GLN 184 4 1 Y 1 A LEU 184 ? A LEU 185 5 1 Y 1 A GLU 185 ? A GLU 186 6 1 Y 1 A HIS 186 ? A HIS 187 7 1 Y 1 A HIS 187 ? A HIS 188 8 1 Y 1 A HIS 188 ? A HIS 189 9 1 Y 1 A HIS 189 ? A HIS 190 10 1 Y 1 A HIS 190 ? A HIS 191 11 1 Y 1 A HIS 191 ? A HIS 192 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5ED N1 N N N 1 5ED C4 C Y N 2 5ED C5 C Y N 3 5ED C6 C Y N 4 5ED C7 C Y N 5 5ED C8 C Y N 6 5ED C10 C N S 7 5ED C13 C N N 8 5ED C15 C N N 9 5ED C17 C N N 10 5ED C20 C N N 11 5ED C22 C N N 12 5ED C24 C N N 13 5ED C26 C N N 14 5ED C1 C N N 15 5ED C2 C N S 16 5ED C3 C N N 17 5ED C9 C Y N 18 5ED C11 C N N 19 5ED C12 C N S 20 5ED C14 C N N 21 5ED C16 C N N 22 5ED C18 C N N 23 5ED C23 C N N 24 5ED C25 C N N 25 5ED O3 O N N 26 5ED O2 O N N 27 5ED C19 C N N 28 5ED O1 O N N 29 5ED N N N N 30 5ED O4 O N N 31 5ED N2 N N N 32 5ED O21 O N N 33 5ED O5 O N N 34 5ED N6 N N N 35 5ED C21 C N N 36 5ED C27 C N N 37 5ED H1 H N N 38 5ED H2 H N N 39 5ED H3 H N N 40 5ED H4 H N N 41 5ED H5 H N N 42 5ED H6 H N N 43 5ED H7 H N N 44 5ED H9 H N N 45 5ED H10 H N N 46 5ED H11 H N N 47 5ED H12 H N N 48 5ED H13 H N N 49 5ED H14 H N N 50 5ED H15 H N N 51 5ED H16 H N N 52 5ED H17 H N N 53 5ED H18 H N N 54 5ED H19 H N N 55 5ED H20 H N N 56 5ED H21 H N N 57 5ED H23 H N N 58 5ED H24 H N N 59 5ED H25 H N N 60 5ED H26 H N N 61 5ED H27 H N N 62 5ED H28 H N N 63 5ED H29 H N N 64 5ED H30 H N N 65 5ED H31 H N N 66 5ED H32 H N N 67 5ED H33 H N N 68 5ED H34 H N N 69 5ED H35 H N N 70 5ED H36 H N N 71 5ED H37 H N N 72 5ED H38 H N N 73 ALA N N N N 74 ALA CA C N S 75 ALA C C N N 76 ALA O O N N 77 ALA CB C N N 78 ALA OXT O N N 79 ALA H H N N 80 ALA H2 H N N 81 ALA HA H N N 82 ALA HB1 H N N 83 ALA HB2 H N N 84 ALA HB3 H N N 85 ALA HXT H N N 86 ARG N N N N 87 ARG CA C N S 88 ARG C C N N 89 ARG O O N N 90 ARG CB C N N 91 ARG CG C N N 92 ARG CD C N N 93 ARG NE N N N 94 ARG CZ C N N 95 ARG NH1 N N N 96 ARG NH2 N N N 97 ARG OXT O N N 98 ARG H H N N 99 ARG H2 H N N 100 ARG HA H N N 101 ARG HB2 H N N 102 ARG HB3 H N N 103 ARG HG2 H N N 104 ARG HG3 H N N 105 ARG HD2 H N N 106 ARG HD3 H N N 107 ARG HE H N N 108 ARG HH11 H N N 109 ARG HH12 H N N 110 ARG HH21 H N N 111 ARG HH22 H N N 112 ARG HXT H N N 113 ASN N N N N 114 ASN CA C N S 115 ASN C C N N 116 ASN O O N N 117 ASN CB C N N 118 ASN CG C N N 119 ASN OD1 O N N 120 ASN ND2 N N N 121 ASN OXT O N N 122 ASN H H N N 123 ASN H2 H N N 124 ASN HA H N N 125 ASN HB2 H N N 126 ASN HB3 H N N 127 ASN HD21 H N N 128 ASN HD22 H N N 129 ASN HXT H N N 130 ASP N N N N 131 ASP CA C N S 132 ASP C C N N 133 ASP O O N N 134 ASP CB C N N 135 ASP CG C N N 136 ASP OD1 O N N 137 ASP OD2 O N N 138 ASP OXT O N N 139 ASP H H N N 140 ASP H2 H N N 141 ASP HA H N N 142 ASP HB2 H N N 143 ASP HB3 H N N 144 ASP HD2 H N N 145 ASP HXT H N N 146 CYS N N N N 147 CYS CA C N R 148 CYS C C N N 149 CYS O O N N 150 CYS CB C N N 151 CYS SG S N N 152 CYS OXT O N N 153 CYS H H N N 154 CYS H2 H N N 155 CYS HA H N N 156 CYS HB2 H N N 157 CYS HB3 H N N 158 CYS HG H N N 159 CYS HXT H N N 160 GLN N N N N 161 GLN CA C N S 162 GLN C C N N 163 GLN O O N N 164 GLN CB C N N 165 GLN CG C N N 166 GLN CD C N N 167 GLN OE1 O N N 168 GLN NE2 N N N 169 GLN OXT O N N 170 GLN H H N N 171 GLN H2 H N N 172 GLN HA H N N 173 GLN HB2 H N N 174 GLN HB3 H N N 175 GLN HG2 H N N 176 GLN HG3 H N N 177 GLN HE21 H N N 178 GLN HE22 H N N 179 GLN HXT H N N 180 GLU N N N N 181 GLU CA C N S 182 GLU C C N N 183 GLU O O N N 184 GLU CB C N N 185 GLU CG C N N 186 GLU CD C N N 187 GLU OE1 O N N 188 GLU OE2 O N N 189 GLU OXT O N N 190 GLU H H N N 191 GLU H2 H N N 192 GLU HA H N N 193 GLU HB2 H N N 194 GLU HB3 H N N 195 GLU HG2 H N N 196 GLU HG3 H N N 197 GLU HE2 H N N 198 GLU HXT H N N 199 GLY N N N N 200 GLY CA C N N 201 GLY C C N N 202 GLY O O N N 203 GLY OXT O N N 204 GLY H H N N 205 GLY H2 H N N 206 GLY HA2 H N N 207 GLY HA3 H N N 208 GLY HXT H N N 209 HIS N N N N 210 HIS CA C N S 211 HIS C C N N 212 HIS O O N N 213 HIS CB C N N 214 HIS CG C Y N 215 HIS ND1 N Y N 216 HIS CD2 C Y N 217 HIS CE1 C Y N 218 HIS NE2 N Y N 219 HIS OXT O N N 220 HIS H H N N 221 HIS H2 H N N 222 HIS HA H N N 223 HIS HB2 H N N 224 HIS HB3 H N N 225 HIS HD1 H N N 226 HIS HD2 H N N 227 HIS HE1 H N N 228 HIS HE2 H N N 229 HIS HXT H N N 230 HOH O O N N 231 HOH H1 H N N 232 HOH H2 H N N 233 ILE N N N N 234 ILE CA C N S 235 ILE C C N N 236 ILE O O N N 237 ILE CB C N S 238 ILE CG1 C N N 239 ILE CG2 C N N 240 ILE CD1 C N N 241 ILE OXT O N N 242 ILE H H N N 243 ILE H2 H N N 244 ILE HA H N N 245 ILE HB H N N 246 ILE HG12 H N N 247 ILE HG13 H N N 248 ILE HG21 H N N 249 ILE HG22 H N N 250 ILE HG23 H N N 251 ILE HD11 H N N 252 ILE HD12 H N N 253 ILE HD13 H N N 254 ILE HXT H N N 255 LEU N N N N 256 LEU CA C N S 257 LEU C C N N 258 LEU O O N N 259 LEU CB C N N 260 LEU CG C N N 261 LEU CD1 C N N 262 LEU CD2 C N N 263 LEU OXT O N N 264 LEU H H N N 265 LEU H2 H N N 266 LEU HA H N N 267 LEU HB2 H N N 268 LEU HB3 H N N 269 LEU HG H N N 270 LEU HD11 H N N 271 LEU HD12 H N N 272 LEU HD13 H N N 273 LEU HD21 H N N 274 LEU HD22 H N N 275 LEU HD23 H N N 276 LEU HXT H N N 277 LYS N N N N 278 LYS CA C N S 279 LYS C C N N 280 LYS O O N N 281 LYS CB C N N 282 LYS CG C N N 283 LYS CD C N N 284 LYS CE C N N 285 LYS NZ N N N 286 LYS OXT O N N 287 LYS H H N N 288 LYS H2 H N N 289 LYS HA H N N 290 LYS HB2 H N N 291 LYS HB3 H N N 292 LYS HG2 H N N 293 LYS HG3 H N N 294 LYS HD2 H N N 295 LYS HD3 H N N 296 LYS HE2 H N N 297 LYS HE3 H N N 298 LYS HZ1 H N N 299 LYS HZ2 H N N 300 LYS HZ3 H N N 301 LYS HXT H N N 302 MET N N N N 303 MET CA C N S 304 MET C C N N 305 MET O O N N 306 MET CB C N N 307 MET CG C N N 308 MET SD S N N 309 MET CE C N N 310 MET OXT O N N 311 MET H H N N 312 MET H2 H N N 313 MET HA H N N 314 MET HB2 H N N 315 MET HB3 H N N 316 MET HG2 H N N 317 MET HG3 H N N 318 MET HE1 H N N 319 MET HE2 H N N 320 MET HE3 H N N 321 MET HXT H N N 322 PHE N N N N 323 PHE CA C N S 324 PHE C C N N 325 PHE O O N N 326 PHE CB C N N 327 PHE CG C Y N 328 PHE CD1 C Y N 329 PHE CD2 C Y N 330 PHE CE1 C Y N 331 PHE CE2 C Y N 332 PHE CZ C Y N 333 PHE OXT O N N 334 PHE H H N N 335 PHE H2 H N N 336 PHE HA H N N 337 PHE HB2 H N N 338 PHE HB3 H N N 339 PHE HD1 H N N 340 PHE HD2 H N N 341 PHE HE1 H N N 342 PHE HE2 H N N 343 PHE HZ H N N 344 PHE HXT H N N 345 PRO N N N N 346 PRO CA C N S 347 PRO C C N N 348 PRO O O N N 349 PRO CB C N N 350 PRO CG C N N 351 PRO CD C N N 352 PRO OXT O N N 353 PRO H H N N 354 PRO HA H N N 355 PRO HB2 H N N 356 PRO HB3 H N N 357 PRO HG2 H N N 358 PRO HG3 H N N 359 PRO HD2 H N N 360 PRO HD3 H N N 361 PRO HXT H N N 362 SER N N N N 363 SER CA C N S 364 SER C C N N 365 SER O O N N 366 SER CB C N N 367 SER OG O N N 368 SER OXT O N N 369 SER H H N N 370 SER H2 H N N 371 SER HA H N N 372 SER HB2 H N N 373 SER HB3 H N N 374 SER HG H N N 375 SER HXT H N N 376 THR N N N N 377 THR CA C N S 378 THR C C N N 379 THR O O N N 380 THR CB C N R 381 THR OG1 O N N 382 THR CG2 C N N 383 THR OXT O N N 384 THR H H N N 385 THR H2 H N N 386 THR HA H N N 387 THR HB H N N 388 THR HG1 H N N 389 THR HG21 H N N 390 THR HG22 H N N 391 THR HG23 H N N 392 THR HXT H N N 393 TRP N N N N 394 TRP CA C N S 395 TRP C C N N 396 TRP O O N N 397 TRP CB C N N 398 TRP CG C Y N 399 TRP CD1 C Y N 400 TRP CD2 C Y N 401 TRP NE1 N Y N 402 TRP CE2 C Y N 403 TRP CE3 C Y N 404 TRP CZ2 C Y N 405 TRP CZ3 C Y N 406 TRP CH2 C Y N 407 TRP OXT O N N 408 TRP H H N N 409 TRP H2 H N N 410 TRP HA H N N 411 TRP HB2 H N N 412 TRP HB3 H N N 413 TRP HD1 H N N 414 TRP HE1 H N N 415 TRP HE3 H N N 416 TRP HZ2 H N N 417 TRP HZ3 H N N 418 TRP HH2 H N N 419 TRP HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 VAL N N N N 445 VAL CA C N S 446 VAL C C N N 447 VAL O O N N 448 VAL CB C N N 449 VAL CG1 C N N 450 VAL CG2 C N N 451 VAL OXT O N N 452 VAL H H N N 453 VAL H2 H N N 454 VAL HA H N N 455 VAL HB H N N 456 VAL HG11 H N N 457 VAL HG12 H N N 458 VAL HG13 H N N 459 VAL HG21 H N N 460 VAL HG22 H N N 461 VAL HG23 H N N 462 VAL HXT H N N 463 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5ED O3 C16 doub N N 1 5ED C16 O2 sing N N 2 5ED C16 C15 sing N N 3 5ED O2 C18 sing N N 4 5ED C15 C14 doub N Z 5 5ED C14 C10 sing N N 6 5ED C18 C19 sing N N 7 5ED C11 C10 sing N N 8 5ED C11 C12 sing N N 9 5ED C10 N sing N N 10 5ED O1 C13 doub N N 11 5ED C13 C12 sing N N 12 5ED C13 N1 sing N N 13 5ED N C17 sing N N 14 5ED C12 C26 sing N N 15 5ED C26 C25 sing N N 16 5ED N1 C25 sing N N 17 5ED O4 C17 doub N N 18 5ED C17 C2 sing N N 19 5ED C3 C2 sing N N 20 5ED C3 C4 sing N N 21 5ED C2 N2 sing N N 22 5ED C4 C5 doub Y N 23 5ED C4 C9 sing Y N 24 5ED C5 C6 sing Y N 25 5ED O21 C20 doub N N 26 5ED N2 C20 sing N N 27 5ED C9 C8 doub Y N 28 5ED C20 C22 sing N N 29 5ED C6 C7 doub Y N 30 5ED C8 C7 sing Y N 31 5ED C22 O5 doub N N 32 5ED C22 N6 sing N N 33 5ED C21 N6 sing N N 34 5ED C21 C23 sing N N 35 5ED C23 C1 sing N N 36 5ED C27 C1 sing N N 37 5ED C27 C24 sing N N 38 5ED C1 C24 sing N N 39 5ED N1 H1 sing N N 40 5ED C5 H2 sing N N 41 5ED C6 H3 sing N N 42 5ED C7 H4 sing N N 43 5ED C8 H5 sing N N 44 5ED C10 H6 sing N N 45 5ED C15 H7 sing N N 46 5ED C24 H9 sing N N 47 5ED C24 H10 sing N N 48 5ED C26 H11 sing N N 49 5ED C26 H12 sing N N 50 5ED C1 H13 sing N N 51 5ED C2 H14 sing N N 52 5ED C3 H15 sing N N 53 5ED C3 H16 sing N N 54 5ED C9 H17 sing N N 55 5ED C11 H18 sing N N 56 5ED C11 H19 sing N N 57 5ED C12 H20 sing N N 58 5ED C14 H21 sing N N 59 5ED C18 H23 sing N N 60 5ED C18 H24 sing N N 61 5ED C23 H25 sing N N 62 5ED C23 H26 sing N N 63 5ED C25 H27 sing N N 64 5ED C25 H28 sing N N 65 5ED C19 H29 sing N N 66 5ED C19 H30 sing N N 67 5ED C19 H31 sing N N 68 5ED N H32 sing N N 69 5ED N2 H33 sing N N 70 5ED N6 H34 sing N N 71 5ED C21 H35 sing N N 72 5ED C21 H36 sing N N 73 5ED C27 H37 sing N N 74 5ED C27 H38 sing N N 75 ALA N CA sing N N 76 ALA N H sing N N 77 ALA N H2 sing N N 78 ALA CA C sing N N 79 ALA CA CB sing N N 80 ALA CA HA sing N N 81 ALA C O doub N N 82 ALA C OXT sing N N 83 ALA CB HB1 sing N N 84 ALA CB HB2 sing N N 85 ALA CB HB3 sing N N 86 ALA OXT HXT sing N N 87 ARG N CA sing N N 88 ARG N H sing N N 89 ARG N H2 sing N N 90 ARG CA C sing N N 91 ARG CA CB sing N N 92 ARG CA HA sing N N 93 ARG C O doub N N 94 ARG C OXT sing N N 95 ARG CB CG sing N N 96 ARG CB HB2 sing N N 97 ARG CB HB3 sing N N 98 ARG CG CD sing N N 99 ARG CG HG2 sing N N 100 ARG CG HG3 sing N N 101 ARG CD NE sing N N 102 ARG CD HD2 sing N N 103 ARG CD HD3 sing N N 104 ARG NE CZ sing N N 105 ARG NE HE sing N N 106 ARG CZ NH1 sing N N 107 ARG CZ NH2 doub N N 108 ARG NH1 HH11 sing N N 109 ARG NH1 HH12 sing N N 110 ARG NH2 HH21 sing N N 111 ARG NH2 HH22 sing N N 112 ARG OXT HXT sing N N 113 ASN N CA sing N N 114 ASN N H sing N N 115 ASN N H2 sing N N 116 ASN CA C sing N N 117 ASN CA CB sing N N 118 ASN CA HA sing N N 119 ASN C O doub N N 120 ASN C OXT sing N N 121 ASN CB CG sing N N 122 ASN CB HB2 sing N N 123 ASN CB HB3 sing N N 124 ASN CG OD1 doub N N 125 ASN CG ND2 sing N N 126 ASN ND2 HD21 sing N N 127 ASN ND2 HD22 sing N N 128 ASN OXT HXT sing N N 129 ASP N CA sing N N 130 ASP N H sing N N 131 ASP N H2 sing N N 132 ASP CA C sing N N 133 ASP CA CB sing N N 134 ASP CA HA sing N N 135 ASP C O doub N N 136 ASP C OXT sing N N 137 ASP CB CG sing N N 138 ASP CB HB2 sing N N 139 ASP CB HB3 sing N N 140 ASP CG OD1 doub N N 141 ASP CG OD2 sing N N 142 ASP OD2 HD2 sing N N 143 ASP OXT HXT sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 GLN N CA sing N N 158 GLN N H sing N N 159 GLN N H2 sing N N 160 GLN CA C sing N N 161 GLN CA CB sing N N 162 GLN CA HA sing N N 163 GLN C O doub N N 164 GLN C OXT sing N N 165 GLN CB CG sing N N 166 GLN CB HB2 sing N N 167 GLN CB HB3 sing N N 168 GLN CG CD sing N N 169 GLN CG HG2 sing N N 170 GLN CG HG3 sing N N 171 GLN CD OE1 doub N N 172 GLN CD NE2 sing N N 173 GLN NE2 HE21 sing N N 174 GLN NE2 HE22 sing N N 175 GLN OXT HXT sing N N 176 GLU N CA sing N N 177 GLU N H sing N N 178 GLU N H2 sing N N 179 GLU CA C sing N N 180 GLU CA CB sing N N 181 GLU CA HA sing N N 182 GLU C O doub N N 183 GLU C OXT sing N N 184 GLU CB CG sing N N 185 GLU CB HB2 sing N N 186 GLU CB HB3 sing N N 187 GLU CG CD sing N N 188 GLU CG HG2 sing N N 189 GLU CG HG3 sing N N 190 GLU CD OE1 doub N N 191 GLU CD OE2 sing N N 192 GLU OE2 HE2 sing N N 193 GLU OXT HXT sing N N 194 GLY N CA sing N N 195 GLY N H sing N N 196 GLY N H2 sing N N 197 GLY CA C sing N N 198 GLY CA HA2 sing N N 199 GLY CA HA3 sing N N 200 GLY C O doub N N 201 GLY C OXT sing N N 202 GLY OXT HXT sing N N 203 HIS N CA sing N N 204 HIS N H sing N N 205 HIS N H2 sing N N 206 HIS CA C sing N N 207 HIS CA CB sing N N 208 HIS CA HA sing N N 209 HIS C O doub N N 210 HIS C OXT sing N N 211 HIS CB CG sing N N 212 HIS CB HB2 sing N N 213 HIS CB HB3 sing N N 214 HIS CG ND1 sing Y N 215 HIS CG CD2 doub Y N 216 HIS ND1 CE1 doub Y N 217 HIS ND1 HD1 sing N N 218 HIS CD2 NE2 sing Y N 219 HIS CD2 HD2 sing N N 220 HIS CE1 NE2 sing Y N 221 HIS CE1 HE1 sing N N 222 HIS NE2 HE2 sing N N 223 HIS OXT HXT sing N N 224 HOH O H1 sing N N 225 HOH O H2 sing N N 226 ILE N CA sing N N 227 ILE N H sing N N 228 ILE N H2 sing N N 229 ILE CA C sing N N 230 ILE CA CB sing N N 231 ILE CA HA sing N N 232 ILE C O doub N N 233 ILE C OXT sing N N 234 ILE CB CG1 sing N N 235 ILE CB CG2 sing N N 236 ILE CB HB sing N N 237 ILE CG1 CD1 sing N N 238 ILE CG1 HG12 sing N N 239 ILE CG1 HG13 sing N N 240 ILE CG2 HG21 sing N N 241 ILE CG2 HG22 sing N N 242 ILE CG2 HG23 sing N N 243 ILE CD1 HD11 sing N N 244 ILE CD1 HD12 sing N N 245 ILE CD1 HD13 sing N N 246 ILE OXT HXT sing N N 247 LEU N CA sing N N 248 LEU N H sing N N 249 LEU N H2 sing N N 250 LEU CA C sing N N 251 LEU CA CB sing N N 252 LEU CA HA sing N N 253 LEU C O doub N N 254 LEU C OXT sing N N 255 LEU CB CG sing N N 256 LEU CB HB2 sing N N 257 LEU CB HB3 sing N N 258 LEU CG CD1 sing N N 259 LEU CG CD2 sing N N 260 LEU CG HG sing N N 261 LEU CD1 HD11 sing N N 262 LEU CD1 HD12 sing N N 263 LEU CD1 HD13 sing N N 264 LEU CD2 HD21 sing N N 265 LEU CD2 HD22 sing N N 266 LEU CD2 HD23 sing N N 267 LEU OXT HXT sing N N 268 LYS N CA sing N N 269 LYS N H sing N N 270 LYS N H2 sing N N 271 LYS CA C sing N N 272 LYS CA CB sing N N 273 LYS CA HA sing N N 274 LYS C O doub N N 275 LYS C OXT sing N N 276 LYS CB CG sing N N 277 LYS CB HB2 sing N N 278 LYS CB HB3 sing N N 279 LYS CG CD sing N N 280 LYS CG HG2 sing N N 281 LYS CG HG3 sing N N 282 LYS CD CE sing N N 283 LYS CD HD2 sing N N 284 LYS CD HD3 sing N N 285 LYS CE NZ sing N N 286 LYS CE HE2 sing N N 287 LYS CE HE3 sing N N 288 LYS NZ HZ1 sing N N 289 LYS NZ HZ2 sing N N 290 LYS NZ HZ3 sing N N 291 LYS OXT HXT sing N N 292 MET N CA sing N N 293 MET N H sing N N 294 MET N H2 sing N N 295 MET CA C sing N N 296 MET CA CB sing N N 297 MET CA HA sing N N 298 MET C O doub N N 299 MET C OXT sing N N 300 MET CB CG sing N N 301 MET CB HB2 sing N N 302 MET CB HB3 sing N N 303 MET CG SD sing N N 304 MET CG HG2 sing N N 305 MET CG HG3 sing N N 306 MET SD CE sing N N 307 MET CE HE1 sing N N 308 MET CE HE2 sing N N 309 MET CE HE3 sing N N 310 MET OXT HXT sing N N 311 PHE N CA sing N N 312 PHE N H sing N N 313 PHE N H2 sing N N 314 PHE CA C sing N N 315 PHE CA CB sing N N 316 PHE CA HA sing N N 317 PHE C O doub N N 318 PHE C OXT sing N N 319 PHE CB CG sing N N 320 PHE CB HB2 sing N N 321 PHE CB HB3 sing N N 322 PHE CG CD1 doub Y N 323 PHE CG CD2 sing Y N 324 PHE CD1 CE1 sing Y N 325 PHE CD1 HD1 sing N N 326 PHE CD2 CE2 doub Y N 327 PHE CD2 HD2 sing N N 328 PHE CE1 CZ doub Y N 329 PHE CE1 HE1 sing N N 330 PHE CE2 CZ sing Y N 331 PHE CE2 HE2 sing N N 332 PHE CZ HZ sing N N 333 PHE OXT HXT sing N N 334 PRO N CA sing N N 335 PRO N CD sing N N 336 PRO N H sing N N 337 PRO CA C sing N N 338 PRO CA CB sing N N 339 PRO CA HA sing N N 340 PRO C O doub N N 341 PRO C OXT sing N N 342 PRO CB CG sing N N 343 PRO CB HB2 sing N N 344 PRO CB HB3 sing N N 345 PRO CG CD sing N N 346 PRO CG HG2 sing N N 347 PRO CG HG3 sing N N 348 PRO CD HD2 sing N N 349 PRO CD HD3 sing N N 350 PRO OXT HXT sing N N 351 SER N CA sing N N 352 SER N H sing N N 353 SER N H2 sing N N 354 SER CA C sing N N 355 SER CA CB sing N N 356 SER CA HA sing N N 357 SER C O doub N N 358 SER C OXT sing N N 359 SER CB OG sing N N 360 SER CB HB2 sing N N 361 SER CB HB3 sing N N 362 SER OG HG sing N N 363 SER OXT HXT sing N N 364 THR N CA sing N N 365 THR N H sing N N 366 THR N H2 sing N N 367 THR CA C sing N N 368 THR CA CB sing N N 369 THR CA HA sing N N 370 THR C O doub N N 371 THR C OXT sing N N 372 THR CB OG1 sing N N 373 THR CB CG2 sing N N 374 THR CB HB sing N N 375 THR OG1 HG1 sing N N 376 THR CG2 HG21 sing N N 377 THR CG2 HG22 sing N N 378 THR CG2 HG23 sing N N 379 THR OXT HXT sing N N 380 TRP N CA sing N N 381 TRP N H sing N N 382 TRP N H2 sing N N 383 TRP CA C sing N N 384 TRP CA CB sing N N 385 TRP CA HA sing N N 386 TRP C O doub N N 387 TRP C OXT sing N N 388 TRP CB CG sing N N 389 TRP CB HB2 sing N N 390 TRP CB HB3 sing N N 391 TRP CG CD1 doub Y N 392 TRP CG CD2 sing Y N 393 TRP CD1 NE1 sing Y N 394 TRP CD1 HD1 sing N N 395 TRP CD2 CE2 doub Y N 396 TRP CD2 CE3 sing Y N 397 TRP NE1 CE2 sing Y N 398 TRP NE1 HE1 sing N N 399 TRP CE2 CZ2 sing Y N 400 TRP CE3 CZ3 doub Y N 401 TRP CE3 HE3 sing N N 402 TRP CZ2 CH2 doub Y N 403 TRP CZ2 HZ2 sing N N 404 TRP CZ3 CH2 sing Y N 405 TRP CZ3 HZ3 sing N N 406 TRP CH2 HH2 sing N N 407 TRP OXT HXT sing N N 408 TYR N CA sing N N 409 TYR N H sing N N 410 TYR N H2 sing N N 411 TYR CA C sing N N 412 TYR CA CB sing N N 413 TYR CA HA sing N N 414 TYR C O doub N N 415 TYR C OXT sing N N 416 TYR CB CG sing N N 417 TYR CB HB2 sing N N 418 TYR CB HB3 sing N N 419 TYR CG CD1 doub Y N 420 TYR CG CD2 sing Y N 421 TYR CD1 CE1 sing Y N 422 TYR CD1 HD1 sing N N 423 TYR CD2 CE2 doub Y N 424 TYR CD2 HD2 sing N N 425 TYR CE1 CZ doub Y N 426 TYR CE1 HE1 sing N N 427 TYR CE2 CZ sing Y N 428 TYR CE2 HE2 sing N N 429 TYR CZ OH sing N N 430 TYR OH HH sing N N 431 TYR OXT HXT sing N N 432 VAL N CA sing N N 433 VAL N H sing N N 434 VAL N H2 sing N N 435 VAL CA C sing N N 436 VAL CA CB sing N N 437 VAL CA HA sing N N 438 VAL C O doub N N 439 VAL C OXT sing N N 440 VAL CB CG1 sing N N 441 VAL CB CG2 sing N N 442 VAL CB HB sing N N 443 VAL CG1 HG11 sing N N 444 VAL CG1 HG12 sing N N 445 VAL CG1 HG13 sing N N 446 VAL CG2 HG21 sing N N 447 VAL CG2 HG22 sing N N 448 VAL CG2 HG23 sing N N 449 VAL OXT HXT sing N N 450 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4GHQ _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5DP8 _atom_sites.fract_transf_matrix[1][1] 0.015638 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015390 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013226 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_