data_5DPT # _entry.id 5DPT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DPT pdb_00005dpt 10.2210/pdb5dpt/pdb WWPDB D_1000213638 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-28 2 'Structure model' 1 1 2018-06-20 3 'Structure model' 1 2 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' diffrn_source 4 2 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 13 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DPT _pdbx_database_status.recvd_initial_deposition_date 2015-09-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5DPR PDB . unspecified 5DPS PDB . unspecified 5DPW PDB . unspecified 3X0W PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ravichandran, A.C.' 1 'Suzuki, H.' 2 'Dobson, R.C.J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'EMBO Rep.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1469-3178 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 18 _citation.language ? _citation.page_first 1382 _citation.page_last 1396 _citation.title 'Structural and functional analysis of the GABARAP interaction motif (GIM).' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.15252/embr.201643587 _citation.pdbx_database_id_PubMed 28655748 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rogov, V.V.' 1 ? primary 'Stolz, A.' 2 ? primary 'Ravichandran, A.C.' 3 ? primary 'Rios-Szwed, D.O.' 4 ? primary 'Suzuki, H.' 5 ? primary 'Kniss, A.' 6 ? primary 'Lohr, F.' 7 ? primary 'Wakatsuki, S.' 8 ? primary 'Dotsch, V.' 9 ? primary 'Dikic, I.' 10 ? primary 'Dobson, R.C.' 11 ? primary 'McEwan, D.G.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Pleckstrin homology domain-containing family M member 1, Gamma-aminobutyric acid receptor-associated protein-like 1,Gamma-aminobutyric acid receptor-associated protein-like 1 ; 15706.726 2 ? ? 'UNP Q9Y4G2 627-638, UNP Q9H0R8 2-117' ? 2 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;PH domain-containing family M member 1,162 kDa adapter protein,AP162,Early estrogen-regulated protein,GABA(A) receptor-associated protein-like 1,Glandular epithelial cell protein 1,GEC-1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSVRPQQEDEWVNVGSKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIR KRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYGK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSVRPQQEDEWVNVGSKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIR KRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYGK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '(4S)-2-METHYL-2,4-PENTANEDIOL' _pdbx_entity_nonpoly.comp_id MPD # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 VAL n 1 4 ARG n 1 5 PRO n 1 6 GLN n 1 7 GLN n 1 8 GLU n 1 9 ASP n 1 10 GLU n 1 11 TRP n 1 12 VAL n 1 13 ASN n 1 14 VAL n 1 15 GLY n 1 16 SER n 1 17 LYS n 1 18 PHE n 1 19 GLN n 1 20 TYR n 1 21 LYS n 1 22 GLU n 1 23 ASP n 1 24 HIS n 1 25 PRO n 1 26 PHE n 1 27 GLU n 1 28 TYR n 1 29 ARG n 1 30 LYS n 1 31 LYS n 1 32 GLU n 1 33 GLY n 1 34 GLU n 1 35 LYS n 1 36 ILE n 1 37 ARG n 1 38 LYS n 1 39 LYS n 1 40 TYR n 1 41 PRO n 1 42 ASP n 1 43 ARG n 1 44 VAL n 1 45 PRO n 1 46 VAL n 1 47 ILE n 1 48 VAL n 1 49 GLU n 1 50 LYS n 1 51 ALA n 1 52 PRO n 1 53 LYS n 1 54 ALA n 1 55 ARG n 1 56 VAL n 1 57 PRO n 1 58 ASP n 1 59 LEU n 1 60 ASP n 1 61 LYS n 1 62 ARG n 1 63 LYS n 1 64 TYR n 1 65 LEU n 1 66 VAL n 1 67 PRO n 1 68 SER n 1 69 ASP n 1 70 LEU n 1 71 THR n 1 72 VAL n 1 73 GLY n 1 74 GLN n 1 75 PHE n 1 76 TYR n 1 77 PHE n 1 78 LEU n 1 79 ILE n 1 80 ARG n 1 81 LYS n 1 82 ARG n 1 83 ILE n 1 84 HIS n 1 85 LEU n 1 86 ARG n 1 87 PRO n 1 88 GLU n 1 89 ASP n 1 90 ALA n 1 91 LEU n 1 92 PHE n 1 93 PHE n 1 94 PHE n 1 95 VAL n 1 96 ASN n 1 97 ASN n 1 98 THR n 1 99 ILE n 1 100 PRO n 1 101 PRO n 1 102 THR n 1 103 SER n 1 104 ALA n 1 105 THR n 1 106 MET n 1 107 GLY n 1 108 GLN n 1 109 LEU n 1 110 TYR n 1 111 GLU n 1 112 ASP n 1 113 ASN n 1 114 HIS n 1 115 GLU n 1 116 GLU n 1 117 ASP n 1 118 TYR n 1 119 PHE n 1 120 LEU n 1 121 TYR n 1 122 VAL n 1 123 ALA n 1 124 TYR n 1 125 SER n 1 126 ASP n 1 127 GLU n 1 128 SER n 1 129 VAL n 1 130 TYR n 1 131 GLY n 1 132 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 14 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PLEKHM1, GABARAPL1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'BL21(de3)' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -7 ? ? ? A . n A 1 2 SER 2 -6 ? ? ? A . n A 1 3 VAL 3 -5 ? ? ? A . n A 1 4 ARG 4 -4 ? ? ? A . n A 1 5 PRO 5 -3 ? ? ? A . n A 1 6 GLN 6 -2 ? ? ? A . n A 1 7 GLN 7 -1 ? ? ? A . n A 1 8 GLU 8 0 0 GLU GLU A . n A 1 9 ASP 9 1 1 ASP ASP A . n A 1 10 GLU 10 2 2 GLU GLU A . n A 1 11 TRP 11 3 3 TRP TRP A . n A 1 12 VAL 12 4 4 VAL VAL A . n A 1 13 ASN 13 5 5 ASN ASN A . n A 1 14 VAL 14 6 6 VAL VAL A . n A 1 15 GLY 15 7 7 GLY GLY A . n A 1 16 SER 16 8 8 SER SER A . n A 1 17 LYS 17 9 9 LYS LYS A . n A 1 18 PHE 18 10 10 PHE PHE A . n A 1 19 GLN 19 11 11 GLN GLN A . n A 1 20 TYR 20 12 12 TYR TYR A . n A 1 21 LYS 21 13 13 LYS LYS A . n A 1 22 GLU 22 14 14 GLU GLU A . n A 1 23 ASP 23 15 15 ASP ASP A . n A 1 24 HIS 24 16 16 HIS HIS A . n A 1 25 PRO 25 17 17 PRO PRO A . n A 1 26 PHE 26 18 18 PHE PHE A . n A 1 27 GLU 27 19 19 GLU GLU A . n A 1 28 TYR 28 20 20 TYR TYR A . n A 1 29 ARG 29 21 21 ARG ARG A . n A 1 30 LYS 30 22 22 LYS LYS A . n A 1 31 LYS 31 23 23 LYS LYS A . n A 1 32 GLU 32 24 24 GLU GLU A . n A 1 33 GLY 33 25 25 GLY GLY A . n A 1 34 GLU 34 26 26 GLU GLU A . n A 1 35 LYS 35 27 27 LYS LYS A . n A 1 36 ILE 36 28 28 ILE ILE A . n A 1 37 ARG 37 29 29 ARG ARG A . n A 1 38 LYS 38 30 30 LYS LYS A . n A 1 39 LYS 39 31 31 LYS LYS A . n A 1 40 TYR 40 32 32 TYR TYR A . n A 1 41 PRO 41 33 33 PRO PRO A . n A 1 42 ASP 42 34 34 ASP ASP A . n A 1 43 ARG 43 35 35 ARG ARG A . n A 1 44 VAL 44 36 36 VAL VAL A . n A 1 45 PRO 45 37 37 PRO PRO A . n A 1 46 VAL 46 38 38 VAL VAL A . n A 1 47 ILE 47 39 39 ILE ILE A . n A 1 48 VAL 48 40 40 VAL VAL A . n A 1 49 GLU 49 41 41 GLU GLU A . n A 1 50 LYS 50 42 42 LYS LYS A . n A 1 51 ALA 51 43 43 ALA ALA A . n A 1 52 PRO 52 44 44 PRO PRO A . n A 1 53 LYS 53 45 45 LYS LYS A . n A 1 54 ALA 54 46 46 ALA ALA A . n A 1 55 ARG 55 47 47 ARG ARG A . n A 1 56 VAL 56 48 48 VAL VAL A . n A 1 57 PRO 57 49 49 PRO PRO A . n A 1 58 ASP 58 50 50 ASP ASP A . n A 1 59 LEU 59 51 51 LEU LEU A . n A 1 60 ASP 60 52 52 ASP ASP A . n A 1 61 LYS 61 53 53 LYS LYS A . n A 1 62 ARG 62 54 54 ARG ARG A . n A 1 63 LYS 63 55 55 LYS LYS A . n A 1 64 TYR 64 56 56 TYR TYR A . n A 1 65 LEU 65 57 57 LEU LEU A . n A 1 66 VAL 66 58 58 VAL VAL A . n A 1 67 PRO 67 59 59 PRO PRO A . n A 1 68 SER 68 60 60 SER SER A . n A 1 69 ASP 69 61 61 ASP ASP A . n A 1 70 LEU 70 62 62 LEU LEU A . n A 1 71 THR 71 63 63 THR THR A . n A 1 72 VAL 72 64 64 VAL VAL A . n A 1 73 GLY 73 65 65 GLY GLY A . n A 1 74 GLN 74 66 66 GLN GLN A . n A 1 75 PHE 75 67 67 PHE PHE A . n A 1 76 TYR 76 68 68 TYR TYR A . n A 1 77 PHE 77 69 69 PHE PHE A . n A 1 78 LEU 78 70 70 LEU LEU A . n A 1 79 ILE 79 71 71 ILE ILE A . n A 1 80 ARG 80 72 72 ARG ARG A . n A 1 81 LYS 81 73 73 LYS LYS A . n A 1 82 ARG 82 74 74 ARG ARG A . n A 1 83 ILE 83 75 75 ILE ILE A . n A 1 84 HIS 84 76 76 HIS HIS A . n A 1 85 LEU 85 77 77 LEU LEU A . n A 1 86 ARG 86 78 78 ARG ARG A . n A 1 87 PRO 87 79 79 PRO ALA A . n A 1 88 GLU 88 80 80 GLU GLU A . n A 1 89 ASP 89 81 81 ASP ASP A . n A 1 90 ALA 90 82 82 ALA ALA A . n A 1 91 LEU 91 83 83 LEU LEU A . n A 1 92 PHE 92 84 84 PHE PHE A . n A 1 93 PHE 93 85 85 PHE PHE A . n A 1 94 PHE 94 86 86 PHE PHE A . n A 1 95 VAL 95 87 87 VAL VAL A . n A 1 96 ASN 96 88 88 ASN ASN A . n A 1 97 ASN 97 89 89 ASN ASN A . n A 1 98 THR 98 90 90 THR THR A . n A 1 99 ILE 99 91 91 ILE ILE A . n A 1 100 PRO 100 92 92 PRO PRO A . n A 1 101 PRO 101 93 93 PRO PRO A . n A 1 102 THR 102 94 94 THR THR A . n A 1 103 SER 103 95 95 SER SER A . n A 1 104 ALA 104 96 96 ALA ALA A . n A 1 105 THR 105 97 97 THR THR A . n A 1 106 MET 106 98 98 MET MET A . n A 1 107 GLY 107 99 99 GLY GLY A . n A 1 108 GLN 108 100 100 GLN GLN A . n A 1 109 LEU 109 101 101 LEU LEU A . n A 1 110 TYR 110 102 102 TYR TYR A . n A 1 111 GLU 111 103 103 GLU GLU A . n A 1 112 ASP 112 104 104 ASP ASP A . n A 1 113 ASN 113 105 105 ASN ASN A . n A 1 114 HIS 114 106 106 HIS HIS A . n A 1 115 GLU 115 107 107 GLU GLU A . n A 1 116 GLU 116 108 108 GLU GLU A . n A 1 117 ASP 117 109 109 ASP ASP A . n A 1 118 TYR 118 110 110 TYR TYR A . n A 1 119 PHE 119 111 111 PHE PHE A . n A 1 120 LEU 120 112 112 LEU LEU A . n A 1 121 TYR 121 113 113 TYR TYR A . n A 1 122 VAL 122 114 114 VAL VAL A . n A 1 123 ALA 123 115 115 ALA ALA A . n A 1 124 TYR 124 116 116 TYR TYR A . n A 1 125 SER 125 117 117 SER SER A . n A 1 126 ASP 126 118 118 ASP ASP A . n A 1 127 GLU 127 119 119 GLU GLU A . n A 1 128 SER 128 120 120 SER SER A . n A 1 129 VAL 129 121 121 VAL VAL A . n A 1 130 TYR 130 122 ? ? ? A . n A 1 131 GLY 131 123 ? ? ? A . n A 1 132 LYS 132 124 ? ? ? A . n B 1 1 GLY 1 -7 ? ? ? B . n B 1 2 SER 2 -6 ? ? ? B . n B 1 3 VAL 3 -5 ? ? ? B . n B 1 4 ARG 4 -4 ? ? ? B . n B 1 5 PRO 5 -3 ? ? ? B . n B 1 6 GLN 6 -2 ? ? ? B . n B 1 7 GLN 7 -1 ? ? ? B . n B 1 8 GLU 8 0 ? ? ? B . n B 1 9 ASP 9 1 1 ASP ASP B . n B 1 10 GLU 10 2 2 GLU GLU B . n B 1 11 TRP 11 3 3 TRP TRP B . n B 1 12 VAL 12 4 4 VAL VAL B . n B 1 13 ASN 13 5 5 ASN ASN B . n B 1 14 VAL 14 6 6 VAL VAL B . n B 1 15 GLY 15 7 7 GLY GLY B . n B 1 16 SER 16 8 8 SER SER B . n B 1 17 LYS 17 9 9 LYS LYS B . n B 1 18 PHE 18 10 10 PHE PHE B . n B 1 19 GLN 19 11 11 GLN GLN B . n B 1 20 TYR 20 12 12 TYR TYR B . n B 1 21 LYS 21 13 13 LYS LYS B . n B 1 22 GLU 22 14 14 GLU GLU B . n B 1 23 ASP 23 15 15 ASP ASP B . n B 1 24 HIS 24 16 16 HIS HIS B . n B 1 25 PRO 25 17 17 PRO PRO B . n B 1 26 PHE 26 18 18 PHE PHE B . n B 1 27 GLU 27 19 19 GLU GLU B . n B 1 28 TYR 28 20 20 TYR TYR B . n B 1 29 ARG 29 21 21 ARG ARG B . n B 1 30 LYS 30 22 22 LYS LYS B . n B 1 31 LYS 31 23 23 LYS LYS B . n B 1 32 GLU 32 24 24 GLU GLU B . n B 1 33 GLY 33 25 25 GLY GLY B . n B 1 34 GLU 34 26 26 GLU GLU B . n B 1 35 LYS 35 27 27 LYS LYS B . n B 1 36 ILE 36 28 28 ILE ILE B . n B 1 37 ARG 37 29 29 ARG ARG B . n B 1 38 LYS 38 30 30 LYS LYS B . n B 1 39 LYS 39 31 31 LYS LYS B . n B 1 40 TYR 40 32 32 TYR TYR B . n B 1 41 PRO 41 33 33 PRO PRO B . n B 1 42 ASP 42 34 34 ASP ASP B . n B 1 43 ARG 43 35 35 ARG ARG B . n B 1 44 VAL 44 36 36 VAL VAL B . n B 1 45 PRO 45 37 37 PRO PRO B . n B 1 46 VAL 46 38 38 VAL VAL B . n B 1 47 ILE 47 39 39 ILE ILE B . n B 1 48 VAL 48 40 40 VAL VAL B . n B 1 49 GLU 49 41 41 GLU GLU B . n B 1 50 LYS 50 42 42 LYS LYS B . n B 1 51 ALA 51 43 43 ALA ALA B . n B 1 52 PRO 52 44 44 PRO PRO B . n B 1 53 LYS 53 45 45 LYS LYS B . n B 1 54 ALA 54 46 46 ALA ALA B . n B 1 55 ARG 55 47 47 ARG ARG B . n B 1 56 VAL 56 48 48 VAL VAL B . n B 1 57 PRO 57 49 49 PRO PRO B . n B 1 58 ASP 58 50 50 ASP ASP B . n B 1 59 LEU 59 51 51 LEU LEU B . n B 1 60 ASP 60 52 52 ASP ASP B . n B 1 61 LYS 61 53 53 LYS LYS B . n B 1 62 ARG 62 54 54 ARG ARG B . n B 1 63 LYS 63 55 55 LYS LYS B . n B 1 64 TYR 64 56 56 TYR TYR B . n B 1 65 LEU 65 57 57 LEU LEU B . n B 1 66 VAL 66 58 58 VAL VAL B . n B 1 67 PRO 67 59 59 PRO PRO B . n B 1 68 SER 68 60 60 SER SER B . n B 1 69 ASP 69 61 61 ASP ASP B . n B 1 70 LEU 70 62 62 LEU LEU B . n B 1 71 THR 71 63 63 THR THR B . n B 1 72 VAL 72 64 64 VAL VAL B . n B 1 73 GLY 73 65 65 GLY GLY B . n B 1 74 GLN 74 66 66 GLN GLN B . n B 1 75 PHE 75 67 67 PHE PHE B . n B 1 76 TYR 76 68 68 TYR TYR B . n B 1 77 PHE 77 69 69 PHE PHE B . n B 1 78 LEU 78 70 70 LEU LEU B . n B 1 79 ILE 79 71 71 ILE ILE B . n B 1 80 ARG 80 72 72 ARG ARG B . n B 1 81 LYS 81 73 73 LYS LYS B . n B 1 82 ARG 82 74 74 ARG ARG B . n B 1 83 ILE 83 75 75 ILE ILE B . n B 1 84 HIS 84 76 76 HIS HIS B . n B 1 85 LEU 85 77 77 LEU LEU B . n B 1 86 ARG 86 78 78 ARG ARG B . n B 1 87 PRO 87 79 79 PRO PRO B . n B 1 88 GLU 88 80 80 GLU GLU B . n B 1 89 ASP 89 81 81 ASP ASP B . n B 1 90 ALA 90 82 82 ALA ALA B . n B 1 91 LEU 91 83 83 LEU LEU B . n B 1 92 PHE 92 84 84 PHE PHE B . n B 1 93 PHE 93 85 85 PHE PHE B . n B 1 94 PHE 94 86 86 PHE PHE B . n B 1 95 VAL 95 87 87 VAL VAL B . n B 1 96 ASN 96 88 88 ASN ASN B . n B 1 97 ASN 97 89 89 ASN ASN B . n B 1 98 THR 98 90 90 THR THR B . n B 1 99 ILE 99 91 91 ILE ILE B . n B 1 100 PRO 100 92 92 PRO PRO B . n B 1 101 PRO 101 93 93 PRO PRO B . n B 1 102 THR 102 94 94 THR THR B . n B 1 103 SER 103 95 95 SER SER B . n B 1 104 ALA 104 96 96 ALA ALA B . n B 1 105 THR 105 97 97 THR THR B . n B 1 106 MET 106 98 98 MET MET B . n B 1 107 GLY 107 99 99 GLY GLY B . n B 1 108 GLN 108 100 100 GLN GLN B . n B 1 109 LEU 109 101 101 LEU LEU B . n B 1 110 TYR 110 102 102 TYR TYR B . n B 1 111 GLU 111 103 103 GLU GLU B . n B 1 112 ASP 112 104 104 ASP ASP B . n B 1 113 ASN 113 105 105 ASN ASN B . n B 1 114 HIS 114 106 106 HIS HIS B . n B 1 115 GLU 115 107 107 GLU GLU B . n B 1 116 GLU 116 108 108 GLU GLU B . n B 1 117 ASP 117 109 109 ASP ASP B . n B 1 118 TYR 118 110 110 TYR TYR B . n B 1 119 PHE 119 111 111 PHE PHE B . n B 1 120 LEU 120 112 112 LEU LEU B . n B 1 121 TYR 121 113 113 TYR TYR B . n B 1 122 VAL 122 114 114 VAL VAL B . n B 1 123 ALA 123 115 115 ALA ALA B . n B 1 124 TYR 124 116 116 TYR TYR B . n B 1 125 SER 125 117 117 SER SER B . n B 1 126 ASP 126 118 118 ASP ASP B . n B 1 127 GLU 127 119 119 GLU GLU B . n B 1 128 SER 128 120 120 SER SER B . n B 1 129 VAL 129 121 121 VAL VAL B . n B 1 130 TYR 130 122 122 TYR TYR B . n B 1 131 GLY 131 123 123 GLY GLY B . n B 1 132 LYS 132 124 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPD 1 201 2 MPD MPD A . D 2 MPD 1 201 3 MPD MPD B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 2 ? CG ? A GLU 10 CG 2 1 Y 1 A GLU 2 ? CD ? A GLU 10 CD 3 1 Y 1 A GLU 2 ? OE1 ? A GLU 10 OE1 4 1 Y 1 A GLU 2 ? OE2 ? A GLU 10 OE2 5 1 Y 1 A LYS 9 ? CG ? A LYS 17 CG 6 1 Y 1 A LYS 9 ? CD ? A LYS 17 CD 7 1 Y 1 A LYS 9 ? CE ? A LYS 17 CE 8 1 Y 1 A LYS 9 ? NZ ? A LYS 17 NZ 9 1 Y 1 A GLU 14 ? CG ? A GLU 22 CG 10 1 Y 1 A GLU 14 ? CD ? A GLU 22 CD 11 1 Y 1 A GLU 14 ? OE1 ? A GLU 22 OE1 12 1 Y 1 A GLU 14 ? OE2 ? A GLU 22 OE2 13 1 Y 1 A GLU 19 ? CG ? A GLU 27 CG 14 1 Y 1 A GLU 19 ? CD ? A GLU 27 CD 15 1 Y 1 A GLU 19 ? OE1 ? A GLU 27 OE1 16 1 Y 1 A GLU 19 ? OE2 ? A GLU 27 OE2 17 1 Y 1 A TYR 20 ? CG ? A TYR 28 CG 18 1 Y 1 A TYR 20 ? CD1 ? A TYR 28 CD1 19 1 Y 1 A TYR 20 ? CD2 ? A TYR 28 CD2 20 1 Y 1 A TYR 20 ? CE1 ? A TYR 28 CE1 21 1 Y 1 A TYR 20 ? CE2 ? A TYR 28 CE2 22 1 Y 1 A TYR 20 ? CZ ? A TYR 28 CZ 23 1 Y 1 A TYR 20 ? OH ? A TYR 28 OH 24 1 Y 1 A LYS 22 ? CG ? A LYS 30 CG 25 1 Y 1 A LYS 22 ? CD ? A LYS 30 CD 26 1 Y 1 A LYS 22 ? CE ? A LYS 30 CE 27 1 Y 1 A LYS 22 ? NZ ? A LYS 30 NZ 28 1 Y 1 A LYS 23 ? CG ? A LYS 31 CG 29 1 Y 1 A LYS 23 ? CD ? A LYS 31 CD 30 1 Y 1 A LYS 23 ? CE ? A LYS 31 CE 31 1 Y 1 A LYS 23 ? NZ ? A LYS 31 NZ 32 1 Y 1 A LYS 27 ? CG ? A LYS 35 CG 33 1 Y 1 A LYS 27 ? CD ? A LYS 35 CD 34 1 Y 1 A LYS 27 ? CE ? A LYS 35 CE 35 1 Y 1 A LYS 27 ? NZ ? A LYS 35 NZ 36 1 Y 1 A LYS 30 ? CG ? A LYS 38 CG 37 1 Y 1 A LYS 30 ? CD ? A LYS 38 CD 38 1 Y 1 A LYS 30 ? CE ? A LYS 38 CE 39 1 Y 1 A LYS 30 ? NZ ? A LYS 38 NZ 40 1 Y 1 A LYS 31 ? CG ? A LYS 39 CG 41 1 Y 1 A LYS 31 ? CD ? A LYS 39 CD 42 1 Y 1 A LYS 31 ? CE ? A LYS 39 CE 43 1 Y 1 A LYS 31 ? NZ ? A LYS 39 NZ 44 1 Y 1 A LYS 42 ? CE ? A LYS 50 CE 45 1 Y 1 A LYS 42 ? NZ ? A LYS 50 NZ 46 1 Y 1 A LYS 45 ? CG ? A LYS 53 CG 47 1 Y 1 A LYS 45 ? CD ? A LYS 53 CD 48 1 Y 1 A LYS 45 ? CE ? A LYS 53 CE 49 1 Y 1 A LYS 45 ? NZ ? A LYS 53 NZ 50 1 Y 1 A LYS 53 ? CE ? A LYS 61 CE 51 1 Y 1 A LYS 53 ? NZ ? A LYS 61 NZ 52 1 Y 1 A SER 60 ? OG ? A SER 68 OG 53 1 Y 1 A LYS 73 ? CG ? A LYS 81 CG 54 1 Y 1 A LYS 73 ? CD ? A LYS 81 CD 55 1 Y 1 A LYS 73 ? CE ? A LYS 81 CE 56 1 Y 1 A LYS 73 ? NZ ? A LYS 81 NZ 57 1 Y 1 A PRO 79 ? CG ? A PRO 87 CG 58 1 Y 1 A PRO 79 ? CD ? A PRO 87 CD 59 1 Y 1 A GLU 119 ? CG ? A GLU 127 CG 60 1 Y 1 A GLU 119 ? CD ? A GLU 127 CD 61 1 Y 1 A GLU 119 ? OE1 ? A GLU 127 OE1 62 1 Y 1 A GLU 119 ? OE2 ? A GLU 127 OE2 63 1 Y 1 B LYS 9 ? CG ? B LYS 17 CG 64 1 Y 1 B LYS 9 ? CD ? B LYS 17 CD 65 1 Y 1 B LYS 9 ? CE ? B LYS 17 CE 66 1 Y 1 B LYS 9 ? NZ ? B LYS 17 NZ 67 1 Y 1 B PHE 10 ? CG ? B PHE 18 CG 68 1 Y 1 B PHE 10 ? CD1 ? B PHE 18 CD1 69 1 Y 1 B PHE 10 ? CD2 ? B PHE 18 CD2 70 1 Y 1 B PHE 10 ? CE1 ? B PHE 18 CE1 71 1 Y 1 B PHE 10 ? CE2 ? B PHE 18 CE2 72 1 Y 1 B PHE 10 ? CZ ? B PHE 18 CZ 73 1 Y 1 B GLU 14 ? CG ? B GLU 22 CG 74 1 Y 1 B GLU 14 ? CD ? B GLU 22 CD 75 1 Y 1 B GLU 14 ? OE1 ? B GLU 22 OE1 76 1 Y 1 B GLU 14 ? OE2 ? B GLU 22 OE2 77 1 Y 1 B GLU 19 ? CG ? B GLU 27 CG 78 1 Y 1 B GLU 19 ? CD ? B GLU 27 CD 79 1 Y 1 B GLU 19 ? OE1 ? B GLU 27 OE1 80 1 Y 1 B GLU 19 ? OE2 ? B GLU 27 OE2 81 1 Y 1 B LYS 22 ? CE ? B LYS 30 CE 82 1 Y 1 B LYS 22 ? NZ ? B LYS 30 NZ 83 1 Y 1 B LYS 23 ? CG ? B LYS 31 CG 84 1 Y 1 B LYS 23 ? CD ? B LYS 31 CD 85 1 Y 1 B LYS 23 ? CE ? B LYS 31 CE 86 1 Y 1 B LYS 23 ? NZ ? B LYS 31 NZ 87 1 Y 1 B LYS 27 ? CG ? B LYS 35 CG 88 1 Y 1 B LYS 27 ? CD ? B LYS 35 CD 89 1 Y 1 B LYS 27 ? CE ? B LYS 35 CE 90 1 Y 1 B LYS 27 ? NZ ? B LYS 35 NZ 91 1 Y 1 B LYS 30 ? CG ? B LYS 38 CG 92 1 Y 1 B LYS 30 ? CD ? B LYS 38 CD 93 1 Y 1 B LYS 30 ? CE ? B LYS 38 CE 94 1 Y 1 B LYS 30 ? NZ ? B LYS 38 NZ 95 1 Y 1 B LYS 42 ? CG ? B LYS 50 CG 96 1 Y 1 B LYS 42 ? CD ? B LYS 50 CD 97 1 Y 1 B LYS 42 ? CE ? B LYS 50 CE 98 1 Y 1 B LYS 42 ? NZ ? B LYS 50 NZ 99 1 Y 1 B LYS 45 ? CG ? B LYS 53 CG 100 1 Y 1 B LYS 45 ? CD ? B LYS 53 CD 101 1 Y 1 B LYS 45 ? CE ? B LYS 53 CE 102 1 Y 1 B LYS 45 ? NZ ? B LYS 53 NZ 103 1 Y 1 B ARG 47 ? CG ? B ARG 55 CG 104 1 Y 1 B ARG 47 ? CD ? B ARG 55 CD 105 1 Y 1 B ARG 47 ? NE ? B ARG 55 NE 106 1 Y 1 B ARG 47 ? CZ ? B ARG 55 CZ 107 1 Y 1 B ARG 47 ? NH1 ? B ARG 55 NH1 108 1 Y 1 B ARG 47 ? NH2 ? B ARG 55 NH2 109 1 Y 1 B ASP 52 ? CG ? B ASP 60 CG 110 1 Y 1 B ASP 52 ? OD1 ? B ASP 60 OD1 111 1 Y 1 B ASP 52 ? OD2 ? B ASP 60 OD2 112 1 Y 1 B LYS 53 ? CE ? B LYS 61 CE 113 1 Y 1 B LYS 53 ? NZ ? B LYS 61 NZ 114 1 Y 1 B ARG 54 ? CG ? B ARG 62 CG 115 1 Y 1 B ARG 54 ? CD ? B ARG 62 CD 116 1 Y 1 B ARG 54 ? NE ? B ARG 62 NE 117 1 Y 1 B ARG 54 ? CZ ? B ARG 62 CZ 118 1 Y 1 B ARG 54 ? NH1 ? B ARG 62 NH1 119 1 Y 1 B ARG 54 ? NH2 ? B ARG 62 NH2 120 1 Y 1 B LYS 73 ? CG ? B LYS 81 CG 121 1 Y 1 B LYS 73 ? CD ? B LYS 81 CD 122 1 Y 1 B LYS 73 ? CE ? B LYS 81 CE 123 1 Y 1 B LYS 73 ? NZ ? B LYS 81 NZ 124 1 Y 1 B GLU 80 ? CG ? B GLU 88 CG 125 1 Y 1 B GLU 80 ? CD ? B GLU 88 CD 126 1 Y 1 B GLU 80 ? OE1 ? B GLU 88 OE1 127 1 Y 1 B GLU 80 ? OE2 ? B GLU 88 OE2 128 1 Y 1 B GLU 108 ? CG ? B GLU 116 CG 129 1 Y 1 B GLU 108 ? CD ? B GLU 116 CD 130 1 Y 1 B GLU 108 ? OE1 ? B GLU 116 OE1 131 1 Y 1 B GLU 108 ? OE2 ? B GLU 116 OE2 132 1 Y 1 B GLU 119 ? CG ? B GLU 127 CG 133 1 Y 1 B GLU 119 ? CD ? B GLU 127 CD 134 1 Y 1 B GLU 119 ? OE1 ? B GLU 127 OE1 135 1 Y 1 B GLU 119 ? OE2 ? B GLU 127 OE2 136 1 Y 1 B TYR 122 ? CG ? B TYR 130 CG 137 1 Y 1 B TYR 122 ? CD1 ? B TYR 130 CD1 138 1 Y 1 B TYR 122 ? CD2 ? B TYR 130 CD2 139 1 Y 1 B TYR 122 ? CE1 ? B TYR 130 CE1 140 1 Y 1 B TYR 122 ? CE2 ? B TYR 130 CE2 141 1 Y 1 B TYR 122 ? CZ ? B TYR 130 CZ 142 1 Y 1 B TYR 122 ? OH ? B TYR 130 OH # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5DPT _cell.details ? _cell.formula_units_Z ? _cell.length_a 84.791 _cell.length_a_esd ? _cell.length_b 84.791 _cell.length_b_esd ? _cell.length_c 105.440 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DPT _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DPT _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 64.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% w/v Polyethylene glycol 3,350, 0.2 M NaCl, 8% MPD pH 7.2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-02-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9537 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9537 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DPT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.90 _reflns.d_resolution_low 42.826 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10119 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 3.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DPT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.900 _refine.ls_d_res_low 42.826 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10105 _refine.ls_number_reflns_R_free 562 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.82 _refine.ls_percent_reflns_R_free 5.56 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2162 _refine.ls_R_factor_R_free 0.2595 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2140 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.90 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.41 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1933 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1949 _refine_hist.d_res_high 2.900 _refine_hist.d_res_low 42.826 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2004 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.778 ? 2741 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.428 ? 704 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.030 ? 294 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 361 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.9001 3.1919 . . 149 2317 100.00 . . . 0.3699 . 0.3081 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1919 3.6536 . . 144 2349 100.00 . . . 0.3666 . 0.2619 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6536 4.6023 . . 139 2381 100.00 . . . 0.2481 . 0.2107 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6023 42.8303 . . 130 2496 100.00 . . . 0.2136 . 0.1900 . . . . . . . . . . # _struct.entry_id 5DPT _struct.title 'Crystal structure of PLEKHM1 LIR-fused human GABARAPL1_2-117' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DPT _struct_keywords.text 'Autophagy, chimeric protein, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PKHM1_HUMAN Q9Y4G2 ? 1 VRPQQEDEWVNV 627 2 UNP GBRL1_HUMAN Q9H0R8 ? 1 ;KFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVN NTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYGK ; 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DPT A 3 ? 14 ? Q9Y4G2 627 ? 638 ? -5 6 2 2 5DPT A 17 ? 132 ? Q9H0R8 2 ? 117 ? 9 124 3 1 5DPT B 3 ? 14 ? Q9Y4G2 627 ? 638 ? -5 6 4 2 5DPT B 17 ? 132 ? Q9H0R8 2 ? 117 ? 9 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DPT GLY A 1 ? UNP Q9Y4G2 ? ? 'expression tag' -7 1 1 5DPT SER A 2 ? UNP Q9Y4G2 ? ? 'expression tag' -6 2 1 5DPT GLY A 15 ? UNP Q9Y4G2 ? ? linker 7 3 1 5DPT SER A 16 ? UNP Q9Y4G2 ? ? linker 8 4 3 5DPT GLY B 1 ? UNP Q9Y4G2 ? ? 'expression tag' -7 5 3 5DPT SER B 2 ? UNP Q9Y4G2 ? ? 'expression tag' -6 6 3 5DPT GLY B 15 ? UNP Q9Y4G2 ? ? linker 7 7 3 5DPT SER B 16 ? UNP Q9Y4G2 ? ? linker 8 8 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 19 ? HIS A 24 ? GLN A 11 HIS A 16 1 ? 6 HELX_P HELX_P2 AA2 PRO A 25 ? TYR A 40 ? PRO A 17 TYR A 32 1 ? 16 HELX_P HELX_P3 AA3 THR A 71 ? HIS A 84 ? THR A 63 HIS A 76 1 ? 14 HELX_P HELX_P4 AA4 THR A 105 ? HIS A 114 ? THR A 97 HIS A 106 1 ? 10 HELX_P HELX_P5 AA5 GLN B 19 ? HIS B 24 ? GLN B 11 HIS B 16 1 ? 6 HELX_P HELX_P6 AA6 PRO B 25 ? TYR B 40 ? PRO B 17 TYR B 32 1 ? 16 HELX_P HELX_P7 AA7 THR B 71 ? HIS B 84 ? THR B 63 HIS B 76 1 ? 14 HELX_P HELX_P8 AA8 THR B 105 ? HIS B 114 ? THR B 97 HIS B 106 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 8 A . ? GLU 0 A ASP 9 A ? ASP 1 A 1 -0.92 2 GLY 15 B . ? GLY 7 B SER 16 B ? SER 8 B 1 2.93 3 PRO 87 B . ? PRO 79 B GLU 88 B ? GLU 80 B 1 8.18 4 VAL 129 B . ? VAL 121 B TYR 130 B ? TYR 122 B 1 3.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 12 ? ASN A 13 ? VAL A 4 ASN A 5 AA1 2 LYS B 63 ? PRO B 67 ? LYS B 55 PRO B 59 AA1 3 ARG B 43 ? LYS B 50 ? ARG B 35 LYS B 42 AA1 4 LEU B 120 ? SER B 125 ? LEU B 112 SER B 117 AA1 5 PHE B 92 ? PHE B 94 ? PHE B 84 PHE B 86 AA2 1 LYS A 63 ? PRO A 67 ? LYS A 55 PRO A 59 AA2 2 ARG A 43 ? LYS A 50 ? ARG A 35 LYS A 42 AA2 3 LEU A 120 ? SER A 125 ? LEU A 112 SER A 117 AA2 4 PHE A 92 ? PHE A 94 ? PHE A 84 PHE A 86 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 12 ? N VAL A 4 O LEU B 65 ? O LEU B 57 AA1 2 3 O VAL B 66 ? O VAL B 58 N VAL B 44 ? N VAL B 36 AA1 3 4 N ILE B 47 ? N ILE B 39 O LEU B 120 ? O LEU B 112 AA1 4 5 O ALA B 123 ? O ALA B 115 N PHE B 94 ? N PHE B 86 AA2 1 2 O VAL A 66 ? O VAL A 58 N VAL A 44 ? N VAL A 36 AA2 2 3 N ILE A 47 ? N ILE A 39 O LEU A 120 ? O LEU A 112 AA2 3 4 O ALA A 123 ? O ALA A 115 N PHE A 94 ? N PHE A 86 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MPD 201 ? 6 'binding site for residue MPD A 201' AC2 Software B MPD 201 ? 6 'binding site for residue MPD B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 PHE A 77 ? PHE A 69 . ? 1_555 ? 2 AC1 6 PRO A 87 ? PRO A 79 . ? 1_555 ? 3 AC1 6 TYR B 76 ? TYR B 68 . ? 3_455 ? 4 AC1 6 PHE B 93 ? PHE B 85 . ? 3_455 ? 5 AC1 6 ILE B 99 ? ILE B 91 . ? 3_455 ? 6 AC1 6 THR B 102 ? THR B 94 . ? 3_455 ? 7 AC2 6 TYR A 76 ? TYR A 68 . ? 2_564 ? 8 AC2 6 PHE A 92 ? PHE A 84 . ? 2_564 ? 9 AC2 6 PHE A 93 ? PHE A 85 . ? 2_564 ? 10 AC2 6 ILE A 99 ? ILE A 91 . ? 2_564 ? 11 AC2 6 PRO A 100 ? PRO A 92 . ? 2_564 ? 12 AC2 6 PRO B 87 ? PRO B 79 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PRO _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 17 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -37.88 _pdbx_validate_torsion.psi 148.59 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -41.2169 19.0140 -9.8339 0.9850 ? 0.0793 ? -0.0636 ? 0.9923 ? -0.3169 ? 0.6708 ? 5.5499 ? -0.4136 ? 0.1382 ? 9.4166 ? 1.1956 ? 5.9543 ? 0.3429 ? 0.8761 ? -0.4493 ? -1.7844 ? 0.4018 ? -0.6272 ? 0.6397 ? 0.9560 ? -0.6731 ? 2 'X-RAY DIFFRACTION' ? refined -35.3508 28.1489 -3.8730 0.7240 ? -0.0529 ? -0.1025 ? 0.8853 ? -0.3105 ? 0.8555 ? 10.6193 ? 0.9269 ? -0.0024 ? 3.9455 ? 1.3217 ? 9.8168 ? 0.1041 ? 1.5992 ? -1.0728 ? -0.0383 ? 0.0652 ? -1.2770 ? -0.0781 ? 1.4820 ? -0.4166 ? 3 'X-RAY DIFFRACTION' ? refined -42.6158 30.0686 2.0076 0.5081 ? -0.0305 ? -0.0752 ? 0.5434 ? -0.0356 ? 0.4421 ? 8.3763 ? 3.5532 ? 0.1384 ? 7.6400 ? 2.0839 ? 9.1831 ? 0.6173 ? 0.1703 ? -0.5070 ? 0.3586 ? -0.1274 ? -0.0747 ? 0.0171 ? 0.2089 ? -0.4943 ? 4 'X-RAY DIFFRACTION' ? refined -55.0391 7.7926 -10.4149 0.4975 ? -0.0814 ? 0.0384 ? 0.4636 ? -0.1020 ? 0.5267 ? 9.6469 ? -3.6962 ? 1.6040 ? 8.1905 ? -3.1922 ? 6.3824 ? -0.1803 ? -0.2042 ? -0.2702 ? 0.5060 ? -0.0568 ? 0.3445 ? 0.4217 ? -0.2068 ? 0.2409 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? '(chain A and resid 0:22)' 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? '(chain A and resid 23:55)' 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? '(chain A and resid 56:121)' 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? '(chain B and resid 1:123)' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -7 ? A GLY 1 2 1 Y 1 A SER -6 ? A SER 2 3 1 Y 1 A VAL -5 ? A VAL 3 4 1 Y 1 A ARG -4 ? A ARG 4 5 1 Y 1 A PRO -3 ? A PRO 5 6 1 Y 1 A GLN -2 ? A GLN 6 7 1 Y 1 A GLN -1 ? A GLN 7 8 1 Y 1 A TYR 122 ? A TYR 130 9 1 Y 1 A GLY 123 ? A GLY 131 10 1 Y 1 A LYS 124 ? A LYS 132 11 1 Y 1 B GLY -7 ? B GLY 1 12 1 Y 1 B SER -6 ? B SER 2 13 1 Y 1 B VAL -5 ? B VAL 3 14 1 Y 1 B ARG -4 ? B ARG 4 15 1 Y 1 B PRO -3 ? B PRO 5 16 1 Y 1 B GLN -2 ? B GLN 6 17 1 Y 1 B GLN -1 ? B GLN 7 18 1 Y 1 B GLU 0 ? B GLU 8 19 1 Y 1 B LYS 124 ? B LYS 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 MPD C1 C N N 233 MPD C2 C N N 234 MPD O2 O N N 235 MPD CM C N N 236 MPD C3 C N N 237 MPD C4 C N S 238 MPD O4 O N N 239 MPD C5 C N N 240 MPD H11 H N N 241 MPD H12 H N N 242 MPD H13 H N N 243 MPD HO2 H N N 244 MPD HM1 H N N 245 MPD HM2 H N N 246 MPD HM3 H N N 247 MPD H31 H N N 248 MPD H32 H N N 249 MPD H4 H N N 250 MPD HO4 H N N 251 MPD H51 H N N 252 MPD H52 H N N 253 MPD H53 H N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 MPD C1 C2 sing N N 222 MPD C1 H11 sing N N 223 MPD C1 H12 sing N N 224 MPD C1 H13 sing N N 225 MPD C2 O2 sing N N 226 MPD C2 CM sing N N 227 MPD C2 C3 sing N N 228 MPD O2 HO2 sing N N 229 MPD CM HM1 sing N N 230 MPD CM HM2 sing N N 231 MPD CM HM3 sing N N 232 MPD C3 C4 sing N N 233 MPD C3 H31 sing N N 234 MPD C3 H32 sing N N 235 MPD C4 O4 sing N N 236 MPD C4 C5 sing N N 237 MPD C4 H4 sing N N 238 MPD O4 HO4 sing N N 239 MPD C5 H51 sing N N 240 MPD C5 H52 sing N N 241 MPD C5 H53 sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PRO N CA sing N N 266 PRO N CD sing N N 267 PRO N H sing N N 268 PRO CA C sing N N 269 PRO CA CB sing N N 270 PRO CA HA sing N N 271 PRO C O doub N N 272 PRO C OXT sing N N 273 PRO CB CG sing N N 274 PRO CB HB2 sing N N 275 PRO CB HB3 sing N N 276 PRO CG CD sing N N 277 PRO CG HG2 sing N N 278 PRO CG HG3 sing N N 279 PRO CD HD2 sing N N 280 PRO CD HD3 sing N N 281 PRO OXT HXT sing N N 282 SER N CA sing N N 283 SER N H sing N N 284 SER N H2 sing N N 285 SER CA C sing N N 286 SER CA CB sing N N 287 SER CA HA sing N N 288 SER C O doub N N 289 SER C OXT sing N N 290 SER CB OG sing N N 291 SER CB HB2 sing N N 292 SER CB HB3 sing N N 293 SER OG HG sing N N 294 SER OXT HXT sing N N 295 THR N CA sing N N 296 THR N H sing N N 297 THR N H2 sing N N 298 THR CA C sing N N 299 THR CA CB sing N N 300 THR CA HA sing N N 301 THR C O doub N N 302 THR C OXT sing N N 303 THR CB OG1 sing N N 304 THR CB CG2 sing N N 305 THR CB HB sing N N 306 THR OG1 HG1 sing N N 307 THR CG2 HG21 sing N N 308 THR CG2 HG22 sing N N 309 THR CG2 HG23 sing N N 310 THR OXT HXT sing N N 311 TRP N CA sing N N 312 TRP N H sing N N 313 TRP N H2 sing N N 314 TRP CA C sing N N 315 TRP CA CB sing N N 316 TRP CA HA sing N N 317 TRP C O doub N N 318 TRP C OXT sing N N 319 TRP CB CG sing N N 320 TRP CB HB2 sing N N 321 TRP CB HB3 sing N N 322 TRP CG CD1 doub Y N 323 TRP CG CD2 sing Y N 324 TRP CD1 NE1 sing Y N 325 TRP CD1 HD1 sing N N 326 TRP CD2 CE2 doub Y N 327 TRP CD2 CE3 sing Y N 328 TRP NE1 CE2 sing Y N 329 TRP NE1 HE1 sing N N 330 TRP CE2 CZ2 sing Y N 331 TRP CE3 CZ3 doub Y N 332 TRP CE3 HE3 sing N N 333 TRP CZ2 CH2 doub Y N 334 TRP CZ2 HZ2 sing N N 335 TRP CZ3 CH2 sing Y N 336 TRP CZ3 HZ3 sing N N 337 TRP CH2 HH2 sing N N 338 TRP OXT HXT sing N N 339 TYR N CA sing N N 340 TYR N H sing N N 341 TYR N H2 sing N N 342 TYR CA C sing N N 343 TYR CA CB sing N N 344 TYR CA HA sing N N 345 TYR C O doub N N 346 TYR C OXT sing N N 347 TYR CB CG sing N N 348 TYR CB HB2 sing N N 349 TYR CB HB3 sing N N 350 TYR CG CD1 doub Y N 351 TYR CG CD2 sing Y N 352 TYR CD1 CE1 sing Y N 353 TYR CD1 HD1 sing N N 354 TYR CD2 CE2 doub Y N 355 TYR CD2 HD2 sing N N 356 TYR CE1 CZ doub Y N 357 TYR CE1 HE1 sing N N 358 TYR CE2 CZ sing Y N 359 TYR CE2 HE2 sing N N 360 TYR CZ OH sing N N 361 TYR OH HH sing N N 362 TYR OXT HXT sing N N 363 VAL N CA sing N N 364 VAL N H sing N N 365 VAL N H2 sing N N 366 VAL CA C sing N N 367 VAL CA CB sing N N 368 VAL CA HA sing N N 369 VAL C O doub N N 370 VAL C OXT sing N N 371 VAL CB CG1 sing N N 372 VAL CB CG2 sing N N 373 VAL CB HB sing N N 374 VAL CG1 HG11 sing N N 375 VAL CG1 HG12 sing N N 376 VAL CG1 HG13 sing N N 377 VAL CG2 HG21 sing N N 378 VAL CG2 HG22 sing N N 379 VAL CG2 HG23 sing N N 380 VAL OXT HXT sing N N 381 # _atom_sites.entry_id 5DPT _atom_sites.fract_transf_matrix[1][1] 0.011794 _atom_sites.fract_transf_matrix[1][2] 0.006809 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013618 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009484 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_