HEADER LYASE 18-SEP-15 5DU6 TITLE CRYSTAL STRUCTURE OF M. TUBERCULOSIS ECHA6 BOUND TO LIGAND GSK059A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE ENOYL-COA HYDRATASE ECHA6; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: ECHA6; COMPND 5 EC: 4.2.1.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: ECHA6, RV0905, MTCY31.33; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS ENOYL-COA HYDRATASE-LIKE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.G.COX,G.S.BESRA,K.FUTTERER REVDAT 3 10-JAN-24 5DU6 1 REMARK REVDAT 2 14-SEP-16 5DU6 1 JRNL REVDAT 1 20-JAN-16 5DU6 0 JRNL AUTH J.A.COX,K.A.ABRAHAMS,C.ALEMPARTE,S.GHIDELLI-DISSE,J.RULLAS, JRNL AUTH 2 I.ANGULO-BARTUREN,A.SINGH,S.S.GURCHA,V.NATARAJ,S.BETHELL, JRNL AUTH 3 M.J.REMUINAN,L.ENCINAS,P.J.JERVIS,N.C.CAMMACK,A.BHATT, JRNL AUTH 4 U.KRUSE,M.BANTSCHEFF,K.FUTTERER,D.BARROS,L.BALLELL,G.DREWES, JRNL AUTH 5 G.S.BESRA JRNL TITL THPP TARGET ASSIGNMENT REVEALS ECHA6 AS AN ESSENTIAL FATTY JRNL TITL 2 ACID SHUTTLE IN MYCOBACTERIA. JRNL REF NAT MICROBIOL V. 1 15006 2016 JRNL REFN ESSN 2058-5276 JRNL PMID 27571973 JRNL DOI 10.1038/NMICROBIOL.2015.6 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.600 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 31907 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1612 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 85.9465 - 5.9755 0.97 2664 135 0.1660 0.2036 REMARK 3 2 5.9755 - 4.7431 0.98 2533 155 0.1735 0.1816 REMARK 3 3 4.7431 - 4.1435 0.98 2543 123 0.1413 0.1994 REMARK 3 4 4.1435 - 3.7647 0.99 2520 128 0.1795 0.2171 REMARK 3 5 3.7647 - 3.4948 0.98 2509 136 0.1898 0.2533 REMARK 3 6 3.4948 - 3.2888 0.99 2504 129 0.2090 0.2663 REMARK 3 7 3.2888 - 3.1241 1.00 2526 123 0.2160 0.2774 REMARK 3 8 3.1241 - 2.9881 1.00 2509 137 0.2245 0.3029 REMARK 3 9 2.9881 - 2.8730 1.00 2504 144 0.2515 0.2912 REMARK 3 10 2.8730 - 2.7739 1.00 2496 133 0.2645 0.3269 REMARK 3 11 2.7739 - 2.6871 1.00 2497 130 0.2745 0.3472 REMARK 3 12 2.6871 - 2.6103 0.99 2490 139 0.2693 0.3085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.40 REMARK 3 SHRINKAGE RADIUS : 1.24 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 32.40 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.95780 REMARK 3 B22 (A**2) : 10.36340 REMARK 3 B33 (A**2) : -8.40550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5608 REMARK 3 ANGLE : 1.126 7619 REMARK 3 CHIRALITY : 0.069 859 REMARK 3 PLANARITY : 0.004 1008 REMARK 3 DIHEDRAL : 15.549 2027 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 1:243) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7764 21.9986 -28.4245 REMARK 3 T TENSOR REMARK 3 T11: 0.4377 T22: 0.4649 REMARK 3 T33: 0.4470 T12: -0.0170 REMARK 3 T13: 0.0057 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 1.4500 L22: 1.0679 REMARK 3 L33: 1.3127 L12: -0.0782 REMARK 3 L13: -0.5633 L23: -0.0521 REMARK 3 S TENSOR REMARK 3 S11: -0.1228 S12: 0.2669 S13: -0.3069 REMARK 3 S21: -0.1352 S22: -0.0405 S23: 0.0026 REMARK 3 S31: 0.3260 S32: -0.1168 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESSEQ 1:243) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6043 48.5869 -8.3851 REMARK 3 T TENSOR REMARK 3 T11: 0.5100 T22: 0.4262 REMARK 3 T33: 0.4643 T12: 0.0573 REMARK 3 T13: 0.0027 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.4867 L22: 1.1222 REMARK 3 L33: 1.5709 L12: 0.6573 REMARK 3 L13: -0.0644 L23: -0.7551 REMARK 3 S TENSOR REMARK 3 S11: 0.0120 S12: -0.1396 S13: 0.3700 REMARK 3 S21: 0.3764 S22: -0.0025 S23: 0.2006 REMARK 3 S31: -0.3814 S32: -0.1074 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN C AND RESSEQ 1:243) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1599 51.7690 -35.3549 REMARK 3 T TENSOR REMARK 3 T11: 0.4217 T22: 0.5536 REMARK 3 T33: 0.4664 T12: -0.0516 REMARK 3 T13: -0.0136 T23: 0.1162 REMARK 3 L TENSOR REMARK 3 L11: 1.5513 L22: 1.5974 REMARK 3 L33: 1.1762 L12: -0.2878 REMARK 3 L13: -0.3389 L23: -0.0337 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: 0.2593 S13: 0.2513 REMARK 3 S21: -0.1416 S22: -0.0551 S23: -0.2347 REMARK 3 S31: -0.2184 S32: 0.1558 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DU6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213813. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31967 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.610 REMARK 200 RESOLUTION RANGE LOW (A) : 85.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.59200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3HE2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6 M TRI-SODIUM CITRATE, REMARK 280 CRYOPROTECTED BY ADDING 10 % GLYCEROL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.70000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.90000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.32000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.90000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.70000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.32000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 ASP A 65 REMARK 465 ALA A 66 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 MET C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C -8 REMARK 465 GLY C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 ARG C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 PHE A 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 232 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 LYS A 239 CG CD CE NZ REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 PHE B 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 232 NE CZ NH1 NH2 REMARK 470 LYS B 235 NZ REMARK 470 HIS C 0 CG ND1 CD2 CE1 NE2 REMARK 470 GLU C 8 CG CD OE1 OE2 REMARK 470 LYS C 38 CG CD CE NZ REMARK 470 LYS C 213 CG CD CE NZ REMARK 470 LYS C 218 CE NZ REMARK 470 ARG C 232 NE CZ NH1 NH2 REMARK 470 LYS C 235 CG CD CE NZ REMARK 470 LYS C 239 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 8 79.99 51.38 REMARK 500 ALA A 9 -10.28 71.21 REMARK 500 ASP A 41 -18.67 -149.86 REMARK 500 ASP A 70 35.27 -82.60 REMARK 500 PRO A 122 30.51 -80.78 REMARK 500 SER A 153 28.02 -146.42 REMARK 500 ASP A 201 30.33 -93.26 REMARK 500 LYS A 239 70.92 -114.50 REMARK 500 CYS B 57 116.83 -173.69 REMARK 500 ALA C 9 -4.57 78.72 REMARK 500 ASP C 41 -19.69 -145.44 REMARK 500 CYS C 57 116.15 -164.46 REMARK 500 ASP C 65 100.94 -57.68 REMARK 500 ALA C 69 -54.66 -27.11 REMARK 500 PRO C 122 30.41 -86.67 REMARK 500 LYS C 235 63.32 35.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G59 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G59 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G59 C 301 DBREF 5DU6 A 1 243 UNP P9WNP1 ECHA6_MYCTU 1 243 DBREF 5DU6 B 1 243 UNP P9WNP1 ECHA6_MYCTU 1 243 DBREF 5DU6 C 1 243 UNP P9WNP1 ECHA6_MYCTU 1 243 SEQADV 5DU6 MET A -19 UNP P9WNP1 INITIATING METHIONINE SEQADV 5DU6 GLY A -18 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER A -17 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER A -16 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A -15 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A -14 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A -13 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A -12 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A -11 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A -10 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER A -9 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER A -8 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 GLY A -7 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 LEU A -6 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 VAL A -5 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 PRO A -4 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 ARG A -3 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 GLY A -2 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER A -1 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS A 0 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 MET B -19 UNP P9WNP1 INITIATING METHIONINE SEQADV 5DU6 GLY B -18 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER B -17 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER B -16 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B -15 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B -14 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B -13 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B -12 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B -11 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B -10 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER B -9 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER B -8 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 GLY B -7 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 LEU B -6 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 VAL B -5 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 PRO B -4 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 ARG B -3 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 GLY B -2 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER B -1 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS B 0 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 MET C -19 UNP P9WNP1 INITIATING METHIONINE SEQADV 5DU6 GLY C -18 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER C -17 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER C -16 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C -15 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C -14 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C -13 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C -12 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C -11 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C -10 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER C -9 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER C -8 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 GLY C -7 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 LEU C -6 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 VAL C -5 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 PRO C -4 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 ARG C -3 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 GLY C -2 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 SER C -1 UNP P9WNP1 EXPRESSION TAG SEQADV 5DU6 HIS C 0 UNP P9WNP1 EXPRESSION TAG SEQRES 1 A 263 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 263 LEU VAL PRO ARG GLY SER HIS MET ILE GLY ILE THR GLN SEQRES 3 A 263 ALA GLU ALA VAL LEU THR ILE GLU LEU GLN ARG PRO GLU SEQRES 4 A 263 ARG ARG ASN ALA LEU ASN SER GLN LEU VAL GLU GLU LEU SEQRES 5 A 263 THR GLN ALA ILE ARG LYS ALA GLY ASP GLY SER ALA ARG SEQRES 6 A 263 ALA ILE VAL LEU THR GLY GLN GLY THR ALA PHE CYS ALA SEQRES 7 A 263 GLY ALA ASP LEU SER GLY ASP ALA PHE ALA ALA ASP TYR SEQRES 8 A 263 PRO ASP ARG LEU ILE GLU LEU HIS LYS ALA MET ASP ALA SEQRES 9 A 263 SER PRO MET PRO VAL VAL GLY ALA ILE ASN GLY PRO ALA SEQRES 10 A 263 ILE GLY ALA GLY LEU GLN LEU ALA MET GLN CYS ASP LEU SEQRES 11 A 263 ARG VAL VAL ALA PRO ASP ALA PHE PHE GLN PHE PRO THR SEQRES 12 A 263 SER LYS TYR GLY LEU ALA LEU ASP ASN TRP SER ILE ARG SEQRES 13 A 263 ARG LEU SER SER LEU VAL GLY HIS GLY ARG ALA ARG ALA SEQRES 14 A 263 MET LEU LEU SER ALA GLU LYS LEU THR ALA GLU ILE ALA SEQRES 15 A 263 LEU HIS THR GLY MET ALA ASN ARG ILE GLY THR LEU ALA SEQRES 16 A 263 ASP ALA GLN ALA TRP ALA ALA GLU ILE ALA ARG LEU ALA SEQRES 17 A 263 PRO LEU ALA ILE GLN HIS ALA LYS ARG VAL LEU ASN ASP SEQRES 18 A 263 ASP GLY ALA ILE GLU GLU ALA TRP PRO ALA HIS LYS GLU SEQRES 19 A 263 LEU PHE ASP LYS ALA TRP GLY SER GLN ASP VAL ILE GLU SEQRES 20 A 263 ALA GLN VAL ALA ARG MET GLU LYS ARG PRO PRO LYS PHE SEQRES 21 A 263 GLN GLY ALA SEQRES 1 B 263 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 263 LEU VAL PRO ARG GLY SER HIS MET ILE GLY ILE THR GLN SEQRES 3 B 263 ALA GLU ALA VAL LEU THR ILE GLU LEU GLN ARG PRO GLU SEQRES 4 B 263 ARG ARG ASN ALA LEU ASN SER GLN LEU VAL GLU GLU LEU SEQRES 5 B 263 THR GLN ALA ILE ARG LYS ALA GLY ASP GLY SER ALA ARG SEQRES 6 B 263 ALA ILE VAL LEU THR GLY GLN GLY THR ALA PHE CYS ALA SEQRES 7 B 263 GLY ALA ASP LEU SER GLY ASP ALA PHE ALA ALA ASP TYR SEQRES 8 B 263 PRO ASP ARG LEU ILE GLU LEU HIS LYS ALA MET ASP ALA SEQRES 9 B 263 SER PRO MET PRO VAL VAL GLY ALA ILE ASN GLY PRO ALA SEQRES 10 B 263 ILE GLY ALA GLY LEU GLN LEU ALA MET GLN CYS ASP LEU SEQRES 11 B 263 ARG VAL VAL ALA PRO ASP ALA PHE PHE GLN PHE PRO THR SEQRES 12 B 263 SER LYS TYR GLY LEU ALA LEU ASP ASN TRP SER ILE ARG SEQRES 13 B 263 ARG LEU SER SER LEU VAL GLY HIS GLY ARG ALA ARG ALA SEQRES 14 B 263 MET LEU LEU SER ALA GLU LYS LEU THR ALA GLU ILE ALA SEQRES 15 B 263 LEU HIS THR GLY MET ALA ASN ARG ILE GLY THR LEU ALA SEQRES 16 B 263 ASP ALA GLN ALA TRP ALA ALA GLU ILE ALA ARG LEU ALA SEQRES 17 B 263 PRO LEU ALA ILE GLN HIS ALA LYS ARG VAL LEU ASN ASP SEQRES 18 B 263 ASP GLY ALA ILE GLU GLU ALA TRP PRO ALA HIS LYS GLU SEQRES 19 B 263 LEU PHE ASP LYS ALA TRP GLY SER GLN ASP VAL ILE GLU SEQRES 20 B 263 ALA GLN VAL ALA ARG MET GLU LYS ARG PRO PRO LYS PHE SEQRES 21 B 263 GLN GLY ALA SEQRES 1 C 263 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 263 LEU VAL PRO ARG GLY SER HIS MET ILE GLY ILE THR GLN SEQRES 3 C 263 ALA GLU ALA VAL LEU THR ILE GLU LEU GLN ARG PRO GLU SEQRES 4 C 263 ARG ARG ASN ALA LEU ASN SER GLN LEU VAL GLU GLU LEU SEQRES 5 C 263 THR GLN ALA ILE ARG LYS ALA GLY ASP GLY SER ALA ARG SEQRES 6 C 263 ALA ILE VAL LEU THR GLY GLN GLY THR ALA PHE CYS ALA SEQRES 7 C 263 GLY ALA ASP LEU SER GLY ASP ALA PHE ALA ALA ASP TYR SEQRES 8 C 263 PRO ASP ARG LEU ILE GLU LEU HIS LYS ALA MET ASP ALA SEQRES 9 C 263 SER PRO MET PRO VAL VAL GLY ALA ILE ASN GLY PRO ALA SEQRES 10 C 263 ILE GLY ALA GLY LEU GLN LEU ALA MET GLN CYS ASP LEU SEQRES 11 C 263 ARG VAL VAL ALA PRO ASP ALA PHE PHE GLN PHE PRO THR SEQRES 12 C 263 SER LYS TYR GLY LEU ALA LEU ASP ASN TRP SER ILE ARG SEQRES 13 C 263 ARG LEU SER SER LEU VAL GLY HIS GLY ARG ALA ARG ALA SEQRES 14 C 263 MET LEU LEU SER ALA GLU LYS LEU THR ALA GLU ILE ALA SEQRES 15 C 263 LEU HIS THR GLY MET ALA ASN ARG ILE GLY THR LEU ALA SEQRES 16 C 263 ASP ALA GLN ALA TRP ALA ALA GLU ILE ALA ARG LEU ALA SEQRES 17 C 263 PRO LEU ALA ILE GLN HIS ALA LYS ARG VAL LEU ASN ASP SEQRES 18 C 263 ASP GLY ALA ILE GLU GLU ALA TRP PRO ALA HIS LYS GLU SEQRES 19 C 263 LEU PHE ASP LYS ALA TRP GLY SER GLN ASP VAL ILE GLU SEQRES 20 C 263 ALA GLN VAL ALA ARG MET GLU LYS ARG PRO PRO LYS PHE SEQRES 21 C 263 GLN GLY ALA HET G59 A 301 54 HET G59 B 301 54 HET G59 C 301 54 HETNAM G59 (5R,7R)-5-(4-ETHYLPHENYL)-N-(4-FLUOROBENZYL)-7-METHYL- HETNAM 2 G59 4,5,6,7-TETRAHYDROPYRAZOLO[1,5-A]PYRIMIDINE-3- HETNAM 3 G59 CARBOXAMIDE FORMUL 4 G59 3(C23 H25 F N4 O) FORMUL 7 HOH *102(H2 O) HELIX 1 AA1 ARG A 17 ARG A 21 5 5 HELIX 2 AA2 ASN A 25 ALA A 39 1 15 HELIX 3 AA3 ASP A 70 SER A 85 1 16 HELIX 4 AA4 GLY A 99 CYS A 108 1 10 HELIX 5 AA5 PHE A 121 LYS A 125 5 5 HELIX 6 AA6 ASP A 131 GLY A 143 1 13 HELIX 7 AA7 GLY A 143 SER A 153 1 11 HELIX 8 AA8 ALA A 159 GLY A 166 1 8 HELIX 9 AA9 THR A 173 ALA A 185 1 13 HELIX 10 AB1 ALA A 188 ASP A 201 1 14 HELIX 11 AB2 TRP A 209 GLY A 221 1 13 HELIX 12 AB3 SER A 222 GLU A 234 1 13 HELIX 13 AB4 ARG B 17 ARG B 21 5 5 HELIX 14 AB5 ASN B 25 ALA B 39 1 15 HELIX 15 AB6 PHE B 67 ALA B 69 5 3 HELIX 16 AB7 ASP B 70 SER B 85 1 16 HELIX 17 AB8 GLY B 99 CYS B 108 1 10 HELIX 18 AB9 PRO B 122 GLY B 127 1 6 HELIX 19 AC1 ASP B 131 GLY B 143 1 13 HELIX 20 AC2 GLY B 143 SER B 153 1 11 HELIX 21 AC3 ALA B 159 GLY B 166 1 8 HELIX 22 AC4 THR B 173 ALA B 185 1 13 HELIX 23 AC5 ALA B 188 ASP B 201 1 14 HELIX 24 AC6 TRP B 209 GLY B 221 1 13 HELIX 25 AC7 SER B 222 GLU B 234 1 13 HELIX 26 AC8 ARG C 17 ARG C 21 5 5 HELIX 27 AC9 ASN C 25 ALA C 39 1 15 HELIX 28 AD1 PHE C 67 ALA C 69 5 3 HELIX 29 AD2 ASP C 70 SER C 85 1 16 HELIX 30 AD3 GLY C 99 CYS C 108 1 10 HELIX 31 AD4 PRO C 122 GLY C 127 1 6 HELIX 32 AD5 ASP C 131 ALA C 154 1 24 HELIX 33 AD6 ALA C 159 GLY C 166 1 8 HELIX 34 AD7 THR C 173 ARG C 186 1 14 HELIX 35 AD8 ALA C 188 ASP C 201 1 14 HELIX 36 AD9 TRP C 209 GLY C 221 1 13 HELIX 37 AE1 SER C 222 GLU C 234 1 13 SHEET 1 AA1 6 ILE A 2 ALA A 7 0 SHEET 2 AA1 6 VAL A 10 LEU A 15 -1 O THR A 12 N THR A 5 SHEET 3 AA1 6 ALA A 46 GLY A 51 1 O VAL A 48 N LEU A 11 SHEET 4 AA1 6 VAL A 89 ILE A 93 1 O ALA A 92 N LEU A 49 SHEET 5 AA1 6 LEU A 110 VAL A 113 1 O LEU A 110 N GLY A 91 SHEET 6 AA1 6 ARG A 170 ILE A 171 1 O ARG A 170 N VAL A 113 SHEET 1 AA2 3 ALA A 97 ILE A 98 0 SHEET 2 AA2 3 PHE A 118 GLN A 120 1 O PHE A 118 N ALA A 97 SHEET 3 AA2 3 LEU A 157 THR A 158 -1 O LEU A 157 N PHE A 119 SHEET 1 AA3 6 ILE B 2 ALA B 7 0 SHEET 2 AA3 6 VAL B 10 LEU B 15 -1 O THR B 12 N THR B 5 SHEET 3 AA3 6 ALA B 46 GLY B 51 1 O THR B 50 N LEU B 15 SHEET 4 AA3 6 VAL B 89 ILE B 93 1 O VAL B 90 N ILE B 47 SHEET 5 AA3 6 LEU B 110 VAL B 113 1 O VAL B 112 N GLY B 91 SHEET 6 AA3 6 ARG B 170 ILE B 171 1 O ARG B 170 N VAL B 113 SHEET 1 AA4 3 ALA B 97 ILE B 98 0 SHEET 2 AA4 3 PHE B 118 GLN B 120 1 O PHE B 118 N ALA B 97 SHEET 3 AA4 3 LEU B 157 THR B 158 -1 O LEU B 157 N PHE B 119 SHEET 1 AA5 6 ILE C 2 ALA C 7 0 SHEET 2 AA5 6 VAL C 10 LEU C 15 -1 O THR C 12 N THR C 5 SHEET 3 AA5 6 ALA C 46 GLY C 51 1 O VAL C 48 N ILE C 13 SHEET 4 AA5 6 VAL C 89 ILE C 93 1 O VAL C 90 N ILE C 47 SHEET 5 AA5 6 LEU C 110 VAL C 113 1 O VAL C 112 N GLY C 91 SHEET 6 AA5 6 ARG C 170 ILE C 171 1 O ARG C 170 N VAL C 113 SHEET 1 AA6 3 ALA C 97 ILE C 98 0 SHEET 2 AA6 3 PHE C 118 GLN C 120 1 O PHE C 118 N ALA C 97 SHEET 3 AA6 3 LEU C 157 THR C 158 -1 O LEU C 157 N PHE C 119 CISPEP 1 ASP A 41 GLY A 42 0 6.19 CISPEP 2 ASP B 41 GLY B 42 0 5.59 CISPEP 3 ASP C 41 GLY C 42 0 11.33 SITE 1 AC1 7 LEU A 75 GLN A 107 ASP A 131 TRP A 133 SITE 2 AC1 7 ALA A 208 LYS A 213 PHE A 216 SITE 1 AC2 8 HIS B 79 ASP B 83 GLN B 103 ASP B 131 SITE 2 AC2 8 TRP B 133 ALA B 208 LYS B 213 PHE B 216 SITE 1 AC3 9 LEU C 75 HIS C 79 ASP C 83 GLN C 107 SITE 2 AC3 9 ASP C 131 TRP C 133 ALA C 208 LYS C 213 SITE 3 AC3 9 PHE C 216 CRYST1 51.400 116.640 171.800 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019455 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008573 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005821 0.00000