HEADER PHOSPHOPANTETHEINE BINDING PROTEIN 18-SEP-15 5DUA TITLE FIRST CONDENSATION DOMAIN OF THE CALCIUM-DEPENDENT ANTIBIOTIC TITLE 2 SYNTHETASE IN COMPLEX WITH SUBSTRATE ANALOGUE 3A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDA PEPTIDE SYNTHETASE I; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES1-449; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR (STRAIN ATCC BAA-471 / SOURCE 3 A3(2) / M145); SOURCE 4 ORGANISM_TAXID: 100226; SOURCE 5 STRAIN: ATCC BAA-471 / A3(2) / M145; SOURCE 6 GENE: SCO3230; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NONRIBOSOMAL PEPTIDE SYNTHETASE, CONDENSATION DOMAIN, CHEMICAL PROBE, KEYWDS 2 SUBSTRATE ANALOGUE, PHOSPHOPANTETHEINE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.BLOUDOFF,D.A.ALONZO,T.M.SCHMEING REVDAT 2 08-JAN-20 5DUA 1 JRNL REMARK REVDAT 1 30-MAR-16 5DUA 0 JRNL AUTH K.BLOUDOFF,D.A.ALONZO,T.M.SCHMEING JRNL TITL CHEMICAL PROBES ALLOW STRUCTURAL INSIGHT INTO THE JRNL TITL 2 CONDENSATION REACTION OF NONRIBOSOMAL PEPTIDE SYNTHETASES. JRNL REF CELL CHEM BIOL V. 23 331 2016 JRNL REFN ESSN 2451-9456 JRNL PMID 26991102 JRNL DOI 10.1016/J.CHEMBIOL.2016.02.012 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 71276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1455 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.1968 - 5.1556 0.99 6851 150 0.1632 0.1903 REMARK 3 2 5.1556 - 4.0928 1.00 6976 144 0.1337 0.1724 REMARK 3 3 4.0928 - 3.5756 1.00 6946 150 0.1443 0.1583 REMARK 3 4 3.5756 - 3.2487 1.00 6955 141 0.1583 0.2097 REMARK 3 5 3.2487 - 3.0159 1.00 6952 141 0.1691 0.2212 REMARK 3 6 3.0159 - 2.8381 1.00 6952 141 0.1774 0.2055 REMARK 3 7 2.8381 - 2.6960 1.00 6981 145 0.1728 0.2494 REMARK 3 8 2.6960 - 2.5786 1.00 7003 141 0.1744 0.2327 REMARK 3 9 2.5786 - 2.4794 1.00 6924 136 0.1727 0.2575 REMARK 3 10 2.4794 - 2.3938 1.00 6944 144 0.1829 0.2582 REMARK 3 11 2.3938 - 2.3190 1.00 6932 142 0.1843 0.2368 REMARK 3 12 2.3190 - 2.2527 1.00 7007 144 0.2121 0.2583 REMARK 3 13 2.2527 - 2.1934 1.00 6912 139 0.2316 0.3034 REMARK 3 14 2.1934 - 2.1399 0.99 6892 141 0.2224 0.2371 REMARK 3 15 2.1399 - 2.0912 0.98 6769 136 0.2103 0.2781 REMARK 3 16 2.0912 - 2.0467 0.96 6698 141 0.2072 0.2732 REMARK 3 17 2.0467 - 2.0058 0.94 6586 134 0.2088 0.2669 REMARK 3 18 2.0058 - 1.9679 0.92 6416 130 0.2303 0.2749 REMARK 3 19 1.9679 - 1.9328 0.91 6364 125 0.2765 0.2827 REMARK 3 20 1.9328 - 1.9000 0.90 6240 127 0.3084 0.3598 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6826 REMARK 3 ANGLE : 1.068 9304 REMARK 3 CHIRALITY : 0.039 1041 REMARK 3 PLANARITY : 0.005 1241 REMARK 3 DIHEDRAL : 12.275 2479 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DUA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213757. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75270 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 75.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25-27% PEG 3000, 0.2-0.25M LITHIUM REMARK 280 SULFATE, 0.1 M HEPES, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.39450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.79450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.73950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.79450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.39450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.73950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 ARG A 232 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 ARG B 223 REMARK 465 LEU B 229 REMARK 465 THR B 230 REMARK 465 GLY B 231 REMARK 465 ARG B 232 REMARK 465 GLY B 233 REMARK 465 GLY B 234 REMARK 465 GLY B 357 REMARK 465 THR B 449 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 123 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 170 CD OE1 OE2 REMARK 470 ARG A 208 NE CZ NH1 NH2 REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 319 CD NE CZ NH1 NH2 REMARK 470 ARG B 236 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 319 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 351 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 429 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 448 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CL CL B 501 O HOH B 1028 2.15 REMARK 500 O HOH B 810 O HOH B 975 2.15 REMARK 500 O HOH B 986 O HOH B 1018 2.15 REMARK 500 O HOH A 884 O HOH A 973 2.16 REMARK 500 O HOH A 814 O HOH A 898 2.16 REMARK 500 O HOH A 899 O HOH A 984 2.16 REMARK 500 O HOH B 901 O HOH B 1081 2.17 REMARK 500 O HOH B 611 O HOH B 967 2.18 REMARK 500 O HOH A 657 O HOH A 1030 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1035 O HOH B 1053 3556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 63 CB CYS B 63 SG -0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 136 50.69 -91.46 REMARK 500 ASP A 391 -87.00 -146.13 REMARK 500 ASP A 437 88.13 -152.51 REMARK 500 ASP B 69 -168.36 -71.55 REMARK 500 PRO B 80 150.19 -49.21 REMARK 500 ASP B 391 -83.07 -151.25 REMARK 500 ASP B 437 82.33 -160.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1159 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1160 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A1161 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A1162 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A1163 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A1164 DISTANCE = 7.48 ANGSTROMS REMARK 525 HOH A1165 DISTANCE = 7.52 ANGSTROMS REMARK 525 HOH B1140 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH B1141 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH B1142 DISTANCE = 7.02 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5FQ A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5FQ B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DU9 RELATED DB: PDB DBREF 5DUA A 1 449 UNP Q9Z4X6 Q9Z4X6_STRCO 1 449 DBREF 5DUA B 1 449 UNP Q9Z4X6 Q9Z4X6_STRCO 1 449 SEQADV 5DUA GLY A 0 UNP Q9Z4X6 EXPRESSION TAG SEQADV 5DUA CYS A 17 UNP Q9Z4X6 GLU 17 ENGINEERED MUTATION SEQADV 5DUA GLY B 0 UNP Q9Z4X6 EXPRESSION TAG SEQADV 5DUA CYS B 17 UNP Q9Z4X6 GLU 17 ENGINEERED MUTATION SEQRES 1 A 450 GLY MET SER GLU ASN SER SER VAL ARG HIS GLY LEU THR SEQRES 2 A 450 SER ALA GLN HIS CYS VAL TRP LEU ALA GLN GLN LEU ASP SEQRES 3 A 450 PRO ARG GLY ALA HIS TYR ARG THR GLY SER CYS LEU GLU SEQRES 4 A 450 ILE ASP GLY PRO LEU ASP HIS ALA VAL LEU SER ARG ALA SEQRES 5 A 450 LEU ARG LEU THR VAL ALA GLY THR GLU THR LEU CYS SER SEQRES 6 A 450 ARG PHE LEU THR ASP GLU GLU GLY ARG PRO TYR ARG ALA SEQRES 7 A 450 TYR CYS PRO PRO ALA PRO GLU GLY SER ALA ALA VAL GLU SEQRES 8 A 450 ASP PRO ASP GLY VAL PRO TYR THR PRO VAL LEU LEU ARG SEQRES 9 A 450 HIS ILE ASP LEU SER GLY HIS GLU ASP PRO GLU GLY GLU SEQRES 10 A 450 ALA GLN ARG TRP MET ASP ARG ASP ARG ALA THR PRO LEU SEQRES 11 A 450 PRO LEU ASP ARG PRO GLY LEU SER SER HIS ALA LEU PHE SEQRES 12 A 450 THR LEU GLY GLY GLY ARG HIS LEU TYR TYR LEU GLY VAL SEQRES 13 A 450 HIS HIS ILE VAL ILE ASP GLY THR SER MET ALA LEU PHE SEQRES 14 A 450 TYR GLU ARG LEU ALA GLU VAL TYR ARG ALA LEU ARG ASP SEQRES 15 A 450 GLY ARG ALA VAL PRO ALA ALA ALA PHE GLY ASP THR ASP SEQRES 16 A 450 ARG MET VAL ALA GLY GLU GLU ALA TYR ARG ALA SER ALA SEQRES 17 A 450 ARG TYR GLU ARG ASP ARG ALA TYR TRP THR GLY LEU PHE SEQRES 18 A 450 THR ASP ARG PRO GLU PRO VAL SER LEU THR GLY ARG GLY SEQRES 19 A 450 GLY GLY ARG ALA LEU ALA PRO THR VAL ARG SER LEU GLY SEQRES 20 A 450 LEU PRO PRO GLU ARG THR GLU VAL LEU GLY ARG ALA ALA SEQRES 21 A 450 GLU ALA THR GLY ALA HIS TRP ALA ARG VAL VAL ILE ALA SEQRES 22 A 450 GLY VAL ALA ALA PHE LEU HIS ARG THR THR GLY ALA ARG SEQRES 23 A 450 ASP VAL VAL VAL SER VAL PRO VAL THR GLY ARG TYR GLY SEQRES 24 A 450 ALA ASN ALA ARG ILE THR PRO GLY MET VAL SER ASN ARG SEQRES 25 A 450 LEU PRO LEU ARG LEU ALA VAL ARG PRO GLY GLU SER PHE SEQRES 26 A 450 ALA ARG VAL VAL GLU THR VAL SER GLU ALA MET SER GLY SEQRES 27 A 450 LEU LEU ALA HIS SER ARG PHE ARG GLY GLU ASP LEU ASP SEQRES 28 A 450 ARG GLU LEU GLY GLY ALA GLY VAL SER GLY PRO THR VAL SEQRES 29 A 450 ASN VAL MET PRO TYR ILE ARG PRO VAL ASP PHE GLY GLY SEQRES 30 A 450 PRO VAL GLY LEU MET ARG SER ILE SER SER GLY PRO THR SEQRES 31 A 450 THR ASP LEU ASN ILE VAL LEU THR GLY THR PRO GLU SER SEQRES 32 A 450 GLY LEU ARG VAL ASP PHE GLU GLY ASN PRO GLN VAL TYR SEQRES 33 A 450 GLY GLY GLN ASP LEU THR VAL LEU GLN GLU ARG PHE VAL SEQRES 34 A 450 ARG PHE LEU ALA GLU LEU ALA ALA ASP PRO ALA ALA THR SEQRES 35 A 450 VAL ASP GLU VAL ALA LEU LEU THR SEQRES 1 B 450 GLY MET SER GLU ASN SER SER VAL ARG HIS GLY LEU THR SEQRES 2 B 450 SER ALA GLN HIS CYS VAL TRP LEU ALA GLN GLN LEU ASP SEQRES 3 B 450 PRO ARG GLY ALA HIS TYR ARG THR GLY SER CYS LEU GLU SEQRES 4 B 450 ILE ASP GLY PRO LEU ASP HIS ALA VAL LEU SER ARG ALA SEQRES 5 B 450 LEU ARG LEU THR VAL ALA GLY THR GLU THR LEU CYS SER SEQRES 6 B 450 ARG PHE LEU THR ASP GLU GLU GLY ARG PRO TYR ARG ALA SEQRES 7 B 450 TYR CYS PRO PRO ALA PRO GLU GLY SER ALA ALA VAL GLU SEQRES 8 B 450 ASP PRO ASP GLY VAL PRO TYR THR PRO VAL LEU LEU ARG SEQRES 9 B 450 HIS ILE ASP LEU SER GLY HIS GLU ASP PRO GLU GLY GLU SEQRES 10 B 450 ALA GLN ARG TRP MET ASP ARG ASP ARG ALA THR PRO LEU SEQRES 11 B 450 PRO LEU ASP ARG PRO GLY LEU SER SER HIS ALA LEU PHE SEQRES 12 B 450 THR LEU GLY GLY GLY ARG HIS LEU TYR TYR LEU GLY VAL SEQRES 13 B 450 HIS HIS ILE VAL ILE ASP GLY THR SER MET ALA LEU PHE SEQRES 14 B 450 TYR GLU ARG LEU ALA GLU VAL TYR ARG ALA LEU ARG ASP SEQRES 15 B 450 GLY ARG ALA VAL PRO ALA ALA ALA PHE GLY ASP THR ASP SEQRES 16 B 450 ARG MET VAL ALA GLY GLU GLU ALA TYR ARG ALA SER ALA SEQRES 17 B 450 ARG TYR GLU ARG ASP ARG ALA TYR TRP THR GLY LEU PHE SEQRES 18 B 450 THR ASP ARG PRO GLU PRO VAL SER LEU THR GLY ARG GLY SEQRES 19 B 450 GLY GLY ARG ALA LEU ALA PRO THR VAL ARG SER LEU GLY SEQRES 20 B 450 LEU PRO PRO GLU ARG THR GLU VAL LEU GLY ARG ALA ALA SEQRES 21 B 450 GLU ALA THR GLY ALA HIS TRP ALA ARG VAL VAL ILE ALA SEQRES 22 B 450 GLY VAL ALA ALA PHE LEU HIS ARG THR THR GLY ALA ARG SEQRES 23 B 450 ASP VAL VAL VAL SER VAL PRO VAL THR GLY ARG TYR GLY SEQRES 24 B 450 ALA ASN ALA ARG ILE THR PRO GLY MET VAL SER ASN ARG SEQRES 25 B 450 LEU PRO LEU ARG LEU ALA VAL ARG PRO GLY GLU SER PHE SEQRES 26 B 450 ALA ARG VAL VAL GLU THR VAL SER GLU ALA MET SER GLY SEQRES 27 B 450 LEU LEU ALA HIS SER ARG PHE ARG GLY GLU ASP LEU ASP SEQRES 28 B 450 ARG GLU LEU GLY GLY ALA GLY VAL SER GLY PRO THR VAL SEQRES 29 B 450 ASN VAL MET PRO TYR ILE ARG PRO VAL ASP PHE GLY GLY SEQRES 30 B 450 PRO VAL GLY LEU MET ARG SER ILE SER SER GLY PRO THR SEQRES 31 B 450 THR ASP LEU ASN ILE VAL LEU THR GLY THR PRO GLU SER SEQRES 32 B 450 GLY LEU ARG VAL ASP PHE GLU GLY ASN PRO GLN VAL TYR SEQRES 33 B 450 GLY GLY GLN ASP LEU THR VAL LEU GLN GLU ARG PHE VAL SEQRES 34 B 450 ARG PHE LEU ALA GLU LEU ALA ALA ASP PRO ALA ALA THR SEQRES 35 B 450 VAL ASP GLU VAL ALA LEU LEU THR HET 5FQ A 501 11 HET CL B 501 1 HET 5FQ B 502 11 HETNAM 5FQ N-PENTYL-L-ALANINAMIDE HETNAM CL CHLORIDE ION FORMUL 3 5FQ 2(C8 H18 N2 O) FORMUL 4 CL CL 1- FORMUL 6 HOH *1107(H2 O) HELIX 1 AA1 THR A 12 ASP A 25 1 14 HELIX 2 AA2 ASP A 44 GLY A 58 1 15 HELIX 3 AA3 THR A 59 LEU A 62 5 4 HELIX 4 AA4 ASP A 112 ALA A 126 1 15 HELIX 5 AA5 ASP A 161 GLY A 182 1 22 HELIX 6 AA6 ASP A 192 SER A 206 1 15 HELIX 7 AA7 SER A 206 GLY A 218 1 13 HELIX 8 AA8 PRO A 248 GLY A 263 1 16 HELIX 9 AA9 HIS A 265 GLY A 283 1 19 HELIX 10 AB1 GLY A 298 ILE A 303 1 6 HELIX 11 AB2 SER A 323 HIS A 341 1 19 HELIX 12 AB3 ARG A 345 GLY A 354 1 10 HELIX 13 AB4 GLY A 416 ASP A 437 1 22 HELIX 14 AB5 THR A 441 VAL A 445 5 5 HELIX 15 AB6 THR B 12 ASP B 25 1 14 HELIX 16 AB7 ASP B 44 GLY B 58 1 15 HELIX 17 AB8 THR B 59 LEU B 62 5 4 HELIX 18 AB9 ASP B 112 ALA B 126 1 15 HELIX 19 AC1 ASP B 161 GLY B 182 1 22 HELIX 20 AC2 ASP B 192 ALA B 205 1 14 HELIX 21 AC3 SER B 206 THR B 221 1 16 HELIX 22 AC4 PRO B 248 GLY B 263 1 16 HELIX 23 AC5 HIS B 265 GLY B 283 1 19 HELIX 24 AC6 GLY B 298 ILE B 303 1 6 HELIX 25 AC7 SER B 323 HIS B 341 1 19 HELIX 26 AC8 ARG B 345 GLY B 354 1 10 HELIX 27 AC9 GLY B 416 ASP B 437 1 22 HELIX 28 AD1 THR B 441 VAL B 445 5 5 SHEET 1 AA1 6 LEU A 102 ASP A 106 0 SHEET 2 AA1 6 SER A 137 GLY A 145 1 O LEU A 141 N ARG A 103 SHEET 3 AA1 6 ARG A 148 HIS A 156 -1 O LEU A 150 N PHE A 142 SHEET 4 AA1 6 ARG A 32 ILE A 39 -1 N ILE A 39 O HIS A 149 SHEET 5 AA1 6 VAL A 378 SER A 385 -1 O ARG A 382 N CYS A 36 SHEET 6 AA1 6 VAL A 372 ASP A 373 -1 N VAL A 372 O GLY A 379 SHEET 1 AA2 2 SER A 64 THR A 68 0 SHEET 2 AA2 2 PRO A 74 TYR A 78 -1 O ALA A 77 N ARG A 65 SHEET 1 AA3 4 THR A 241 LEU A 247 0 SHEET 2 AA3 4 GLY A 403 GLY A 410 -1 O VAL A 406 N LEU A 245 SHEET 3 AA3 4 LEU A 392 THR A 399 -1 N ASN A 393 O GLU A 409 SHEET 4 AA3 4 THR A 362 VAL A 365 1 N THR A 362 O ILE A 394 SHEET 1 AA4 2 ASP A 286 VAL A 293 0 SHEET 2 AA4 2 ASN A 310 ALA A 317 -1 O LEU A 314 N VAL A 289 SHEET 1 AA5 6 LEU B 102 ASP B 106 0 SHEET 2 AA5 6 SER B 137 GLY B 145 1 O LEU B 141 N ARG B 103 SHEET 3 AA5 6 ARG B 148 HIS B 156 -1 O LEU B 150 N PHE B 142 SHEET 4 AA5 6 ARG B 32 ILE B 39 -1 N ILE B 39 O HIS B 149 SHEET 5 AA5 6 VAL B 378 SER B 385 -1 O LEU B 380 N GLU B 38 SHEET 6 AA5 6 VAL B 372 ASP B 373 -1 N VAL B 372 O GLY B 379 SHEET 1 AA6 2 SER B 64 THR B 68 0 SHEET 2 AA6 2 PRO B 74 TYR B 78 -1 O ALA B 77 N ARG B 65 SHEET 1 AA7 4 THR B 241 LEU B 247 0 SHEET 2 AA7 4 GLY B 403 GLY B 410 -1 O LEU B 404 N LEU B 247 SHEET 3 AA7 4 LEU B 392 THR B 399 -1 N VAL B 395 O ASP B 407 SHEET 4 AA7 4 THR B 362 VAL B 365 1 N THR B 362 O ILE B 394 SHEET 1 AA8 2 ASP B 286 VAL B 293 0 SHEET 2 AA8 2 ASN B 310 ALA B 317 -1 O LEU B 314 N VAL B 289 LINK SG CYS A 17 C01 5FQ A 501 1555 1555 1.78 LINK SG CYS B 17 C01 5FQ B 502 1555 1555 1.78 SITE 1 AC1 6 ALA A 14 CYS A 17 VAL A 18 HIS A 157 SITE 2 AC1 6 SER A 386 HOH A 694 SITE 1 AC2 6 HIS B 157 ASP B 161 GLY B 162 SER B 309 SITE 2 AC2 6 5FQ B 502 HOH B1028 SITE 1 AC3 15 SER B 13 ALA B 14 GLN B 15 HIS B 16 SITE 2 AC3 15 VAL B 18 TRP B 19 LEU B 20 ALA B 21 SITE 3 AC3 15 HIS B 157 ARG B 311 SER B 386 CL B 501 SITE 4 AC3 15 HOH B 667 HOH B 697 HOH B 735 CRYST1 62.789 83.479 177.589 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015926 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011979 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005631 0.00000