data_5DV1 # _entry.id 5DV1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5DV1 WWPDB D_1000207520 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2017-05-31 _pdbx_database_PDB_obs_spr.pdb_id 5XGF _pdbx_database_PDB_obs_spr.replace_pdb_id 5DV1 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5DV5 _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DV1 _pdbx_database_status.recvd_initial_deposition_date 2015-09-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lin, Y.' 1 'Li, D.F.' 2 'Feng, Y.J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Snapshort of Vibrio FadR-ligand complex structure reveals a new mechanism for bacterial fatty acid sensing' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Feng, Y.J.' 1 primary 'Lin, Y.' 2 primary 'Li, D.F.' 3 primary 'Zhang, H.M.' 4 primary 'Gao, R.S.' 5 primary 'Bi, L.J.' 6 primary 'Wang, S.H.' 7 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5DV1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.000 _cell.length_a_esd ? _cell.length_b 76.000 _cell.length_b_esd ? _cell.length_c 144.410 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GntR family transcriptional regulator' 34405.094 1 ? ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 3 water nat water 18.015 101 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMMVIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDG WLTIQHGKPTKVNQFMETSGLHILDTLMTLDVDNATNIVEDLLAARTNISPIFMRYAFKANKENSERTIKNVIESCEALM NAASWDDFIASSPYAEKVLQNVKEDNEKDEAKRQEILIAKTFNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYY FSNPASRELALKFYHQLLETCESGQREQLPVVIRHYGMESALIWNEMKKQLPTNFTEDDS ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMMVIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDG WLTIQHGKPTKVNQFMETSGLHILDTLMTLDVDNATNIVEDLLAARTNISPIFMRYAFKANKENSERTIKNVIESCEALM NAASWDDFIASSPYAEKVLQNVKEDNEKDEAKRQEILIAKTFNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYY FSNPASRELALKFYHQLLETCESGQREQLPVVIRHYGMESALIWNEMKKQLPTNFTEDDS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 MET n 1 23 VAL n 1 24 ILE n 1 25 LYS n 1 26 ALA n 1 27 LYS n 1 28 SER n 1 29 PRO n 1 30 ALA n 1 31 GLY n 1 32 PHE n 1 33 ALA n 1 34 GLU n 1 35 LYS n 1 36 TYR n 1 37 ILE n 1 38 ILE n 1 39 GLU n 1 40 SER n 1 41 ILE n 1 42 TRP n 1 43 ASN n 1 44 GLY n 1 45 ARG n 1 46 PHE n 1 47 PRO n 1 48 PRO n 1 49 GLY n 1 50 SER n 1 51 ILE n 1 52 LEU n 1 53 PRO n 1 54 ALA n 1 55 GLU n 1 56 ARG n 1 57 GLU n 1 58 LEU n 1 59 SER n 1 60 GLU n 1 61 LEU n 1 62 ILE n 1 63 GLY n 1 64 VAL n 1 65 THR n 1 66 ARG n 1 67 THR n 1 68 THR n 1 69 LEU n 1 70 ARG n 1 71 GLU n 1 72 VAL n 1 73 LEU n 1 74 GLN n 1 75 ARG n 1 76 LEU n 1 77 ALA n 1 78 ARG n 1 79 ASP n 1 80 GLY n 1 81 TRP n 1 82 LEU n 1 83 THR n 1 84 ILE n 1 85 GLN n 1 86 HIS n 1 87 GLY n 1 88 LYS n 1 89 PRO n 1 90 THR n 1 91 LYS n 1 92 VAL n 1 93 ASN n 1 94 GLN n 1 95 PHE n 1 96 MET n 1 97 GLU n 1 98 THR n 1 99 SER n 1 100 GLY n 1 101 LEU n 1 102 HIS n 1 103 ILE n 1 104 LEU n 1 105 ASP n 1 106 THR n 1 107 LEU n 1 108 MET n 1 109 THR n 1 110 LEU n 1 111 ASP n 1 112 VAL n 1 113 ASP n 1 114 ASN n 1 115 ALA n 1 116 THR n 1 117 ASN n 1 118 ILE n 1 119 VAL n 1 120 GLU n 1 121 ASP n 1 122 LEU n 1 123 LEU n 1 124 ALA n 1 125 ALA n 1 126 ARG n 1 127 THR n 1 128 ASN n 1 129 ILE n 1 130 SER n 1 131 PRO n 1 132 ILE n 1 133 PHE n 1 134 MET n 1 135 ARG n 1 136 TYR n 1 137 ALA n 1 138 PHE n 1 139 LYS n 1 140 ALA n 1 141 ASN n 1 142 LYS n 1 143 GLU n 1 144 ASN n 1 145 SER n 1 146 GLU n 1 147 ARG n 1 148 THR n 1 149 ILE n 1 150 LYS n 1 151 ASN n 1 152 VAL n 1 153 ILE n 1 154 GLU n 1 155 SER n 1 156 CYS n 1 157 GLU n 1 158 ALA n 1 159 LEU n 1 160 MET n 1 161 ASN n 1 162 ALA n 1 163 ALA n 1 164 SER n 1 165 TRP n 1 166 ASP n 1 167 ASP n 1 168 PHE n 1 169 ILE n 1 170 ALA n 1 171 SER n 1 172 SER n 1 173 PRO n 1 174 TYR n 1 175 ALA n 1 176 GLU n 1 177 LYS n 1 178 VAL n 1 179 LEU n 1 180 GLN n 1 181 ASN n 1 182 VAL n 1 183 LYS n 1 184 GLU n 1 185 ASP n 1 186 ASN n 1 187 GLU n 1 188 LYS n 1 189 ASP n 1 190 GLU n 1 191 ALA n 1 192 LYS n 1 193 ARG n 1 194 GLN n 1 195 GLU n 1 196 ILE n 1 197 LEU n 1 198 ILE n 1 199 ALA n 1 200 LYS n 1 201 THR n 1 202 PHE n 1 203 ASN n 1 204 PHE n 1 205 TYR n 1 206 ASP n 1 207 TYR n 1 208 MET n 1 209 LEU n 1 210 PHE n 1 211 GLN n 1 212 ARG n 1 213 LEU n 1 214 ALA n 1 215 PHE n 1 216 HIS n 1 217 SER n 1 218 GLY n 1 219 ASN n 1 220 GLN n 1 221 ILE n 1 222 TYR n 1 223 GLY n 1 224 LEU n 1 225 ILE n 1 226 PHE n 1 227 ASN n 1 228 GLY n 1 229 LEU n 1 230 LYS n 1 231 LYS n 1 232 LEU n 1 233 TYR n 1 234 ASP n 1 235 ARG n 1 236 VAL n 1 237 GLY n 1 238 SER n 1 239 TYR n 1 240 TYR n 1 241 PHE n 1 242 SER n 1 243 ASN n 1 244 PRO n 1 245 ALA n 1 246 SER n 1 247 ARG n 1 248 GLU n 1 249 LEU n 1 250 ALA n 1 251 LEU n 1 252 LYS n 1 253 PHE n 1 254 TYR n 1 255 HIS n 1 256 GLN n 1 257 LEU n 1 258 LEU n 1 259 GLU n 1 260 THR n 1 261 CYS n 1 262 GLU n 1 263 SER n 1 264 GLY n 1 265 GLN n 1 266 ARG n 1 267 GLU n 1 268 GLN n 1 269 LEU n 1 270 PRO n 1 271 VAL n 1 272 VAL n 1 273 ILE n 1 274 ARG n 1 275 HIS n 1 276 TYR n 1 277 GLY n 1 278 MET n 1 279 GLU n 1 280 SER n 1 281 ALA n 1 282 LEU n 1 283 ILE n 1 284 TRP n 1 285 ASN n 1 286 GLU n 1 287 MET n 1 288 LYS n 1 289 LYS n 1 290 GLN n 1 291 LEU n 1 292 PRO n 1 293 THR n 1 294 ASN n 1 295 PHE n 1 296 THR n 1 297 GLU n 1 298 ASP n 1 299 ASP n 1 300 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 300 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene AAW52_18775 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain E0666 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio alginolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 663 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A0G9LXQ8_VIBAL _struct_ref.pdbx_db_accession A0A0G9LXQ8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVIKAKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNQFMETSGL HILDTLMTLDVDNATNIVEDLLAARTNISPIFMRYAFKANKENSERTIKNVIESCEALMNAASWDDFIASSPYAEKVLQN VKEDNEKDEAKRQEILIAKTFNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPASRELALKFYHQLLETC ESGQREQLPVVIRHYGMESALIWNEMKKQLPTNFTEDDS ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5DV1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 300 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A0G9LXQ8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 279 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 279 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DV1 MET A 1 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -20 1 1 5DV1 GLY A 2 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -19 2 1 5DV1 SER A 3 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -18 3 1 5DV1 SER A 4 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -17 4 1 5DV1 HIS A 5 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -16 5 1 5DV1 HIS A 6 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -15 6 1 5DV1 HIS A 7 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -14 7 1 5DV1 HIS A 8 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -13 8 1 5DV1 HIS A 9 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -12 9 1 5DV1 HIS A 10 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -11 10 1 5DV1 SER A 11 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -10 11 1 5DV1 SER A 12 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -9 12 1 5DV1 GLY A 13 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -8 13 1 5DV1 LEU A 14 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -7 14 1 5DV1 VAL A 15 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -6 15 1 5DV1 PRO A 16 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -5 16 1 5DV1 ARG A 17 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -4 17 1 5DV1 GLY A 18 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -3 18 1 5DV1 SER A 19 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -2 19 1 5DV1 HIS A 20 ? UNP A0A0G9LXQ8 ? ? 'expression tag' -1 20 1 5DV1 MET A 21 ? UNP A0A0G9LXQ8 ? ? 'expression tag' 0 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DV1 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.15 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '200mM Calcium Acetate, 100mM Sodium Cacodylate pH6.5, 7% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-09-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 41 _reflns.entry_id 5DV1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 18.47 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18014 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.percent_possible_obs 98.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.8 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.071 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.48 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 97.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.410 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 49 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DV1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.35 _refine.ls_d_res_low 18.47 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17995 _refine.ls_number_reflns_R_free 1800 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.38 _refine.ls_percent_reflns_R_free 10.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2199 _refine.ls_R_factor_R_free 0.2595 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2155 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1E2X _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.51 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.27 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2200 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 2302 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 18.47 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 2247 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.377 ? 3037 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.149 ? 842 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.047 ? 331 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 393 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3500 2.4134 . . 128 1161 95.00 . . . 0.3250 . 0.2612 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4134 2.4843 . . 138 1237 99.00 . . . 0.2600 . 0.2503 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4843 2.5643 . . 139 1241 100.00 . . . 0.2835 . 0.2423 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5643 2.6557 . . 137 1241 100.00 . . . 0.3183 . 0.2383 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6557 2.7617 . . 138 1240 100.00 . . . 0.2977 . 0.2396 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7617 2.8869 . . 138 1245 100.00 . . . 0.2410 . 0.2400 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8869 3.0385 . . 140 1260 100.00 . . . 0.2877 . 0.2387 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0385 3.2279 . . 138 1241 100.00 . . . 0.2696 . 0.2326 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2279 3.4756 . . 140 1256 99.00 . . . 0.2332 . 0.2180 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4756 3.8226 . . 137 1242 98.00 . . . 0.2762 . 0.2028 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8226 4.3693 . . 142 1268 99.00 . . . 0.2155 . 0.1895 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3693 5.4809 . . 135 1225 94.00 . . . 0.2457 . 0.1901 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.4809 18.4745 . . 150 1338 96.00 . . . 0.2649 . 0.2091 . . . . . . . . . . # _struct.entry_id 5DV1 _struct.title 'The fatty acid-responsive FadR repressor of Vibrio alginolyticus' _struct.pdbx_descriptor 'GntR family transcriptional regulator' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DV1 _struct_keywords.text 'fatty acid-responsive FadR repressor, palmitoyl1-CoA ester binding, DNA binding, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 29 ? ASN A 43 ? PRO A 8 ASN A 22 1 ? 15 HELX_P HELX_P2 AA2 ARG A 56 ? ILE A 62 ? ARG A 35 ILE A 41 1 ? 7 HELX_P HELX_P3 AA3 THR A 68 ? LEU A 73 ? THR A 47 LEU A 52 1 ? 6 HELX_P HELX_P4 AA4 HIS A 102 ? LEU A 110 ? HIS A 81 LEU A 89 1 ? 9 HELX_P HELX_P5 AA5 ASN A 114 ? ASN A 141 ? ASN A 93 ASN A 120 1 ? 28 HELX_P HELX_P6 AA6 ASN A 141 ? ALA A 162 ? ASN A 120 ALA A 141 1 ? 22 HELX_P HELX_P7 AA7 SER A 164 ? SER A 171 ? SER A 143 SER A 150 1 ? 8 HELX_P HELX_P8 AA8 TYR A 174 ? VAL A 182 ? TYR A 153 VAL A 161 1 ? 9 HELX_P HELX_P9 AA9 ASP A 189 ? SER A 217 ? ASP A 168 SER A 196 1 ? 29 HELX_P HELX_P10 AB1 ASN A 219 ? PHE A 241 ? ASN A 198 PHE A 220 1 ? 23 HELX_P HELX_P11 AB2 ASN A 243 ? GLY A 264 ? ASN A 222 GLY A 243 1 ? 22 HELX_P HELX_P12 AB3 GLU A 267 ? LYS A 288 ? GLU A 246 LYS A 267 1 ? 22 HELX_P HELX_P13 AB4 LYS A 289 ? LEU A 291 ? LYS A 268 LEU A 270 5 ? 3 HELX_P HELX_P14 AB5 PRO A 292 ? GLU A 297 ? PRO A 271 GLU A 276 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A ASP 121 OD1 ? ? ? 1_555 B NI . NI ? ? A ASP 100 A NI 301 1_555 ? ? ? ? ? ? ? 2.417 ? metalc2 metalc ? ? B NI . NI ? ? ? 1_555 C HOH . O ? ? A NI 301 A HOH 418 1_555 ? ? ? ? ? ? ? 2.228 ? metalc3 metalc ? ? B NI . NI ? ? ? 1_555 C HOH . O ? ? A NI 301 A HOH 426 1_555 ? ? ? ? ? ? ? 2.522 ? metalc4 metalc ? ? A GLY 218 O ? ? ? 1_555 B NI . NI ? ? A GLY 197 A NI 301 7_555 ? ? ? ? ? ? ? 2.321 ? metalc5 metalc ? ? B NI . NI ? ? ? 1_555 C HOH . O ? ? A NI 301 A HOH 480 7_555 ? ? ? ? ? ? ? 2.534 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 82 ? ILE A 84 ? LEU A 61 ILE A 63 AA1 2 THR A 90 ? VAL A 92 ? THR A 69 VAL A 71 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 83 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 62 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LYS _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 91 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 70 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NI _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue NI A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 121 ? ASP A 100 . ? 1_555 ? 2 AC1 6 GLY A 218 ? GLY A 197 . ? 7_555 ? 3 AC1 6 HOH C . ? HOH A 418 . ? 1_555 ? 4 AC1 6 HOH C . ? HOH A 426 . ? 1_555 ? 5 AC1 6 HOH C . ? HOH A 480 . ? 7_555 ? 6 AC1 6 HOH C . ? HOH A 489 . ? 1_555 ? # _atom_sites.entry_id 5DV1 _atom_sites.fract_transf_matrix[1][1] 0.013158 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013158 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006925 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -20 ? ? ? A . n A 1 2 GLY 2 -19 ? ? ? A . n A 1 3 SER 3 -18 ? ? ? A . n A 1 4 SER 4 -17 ? ? ? A . n A 1 5 HIS 5 -16 ? ? ? A . n A 1 6 HIS 6 -15 ? ? ? A . n A 1 7 HIS 7 -14 ? ? ? A . n A 1 8 HIS 8 -13 ? ? ? A . n A 1 9 HIS 9 -12 ? ? ? A . n A 1 10 HIS 10 -11 ? ? ? A . n A 1 11 SER 11 -10 ? ? ? A . n A 1 12 SER 12 -9 ? ? ? A . n A 1 13 GLY 13 -8 ? ? ? A . n A 1 14 LEU 14 -7 ? ? ? A . n A 1 15 VAL 15 -6 ? ? ? A . n A 1 16 PRO 16 -5 ? ? ? A . n A 1 17 ARG 17 -4 ? ? ? A . n A 1 18 GLY 18 -3 ? ? ? A . n A 1 19 SER 19 -2 ? ? ? A . n A 1 20 HIS 20 -1 ? ? ? A . n A 1 21 MET 21 0 ? ? ? A . n A 1 22 MET 22 1 ? ? ? A . n A 1 23 VAL 23 2 ? ? ? A . n A 1 24 ILE 24 3 ? ? ? A . n A 1 25 LYS 25 4 ? ? ? A . n A 1 26 ALA 26 5 ? ? ? A . n A 1 27 LYS 27 6 ? ? ? A . n A 1 28 SER 28 7 ? ? ? A . n A 1 29 PRO 29 8 8 PRO PRO A . n A 1 30 ALA 30 9 9 ALA ALA A . n A 1 31 GLY 31 10 10 GLY GLY A . n A 1 32 PHE 32 11 11 PHE PHE A . n A 1 33 ALA 33 12 12 ALA ALA A . n A 1 34 GLU 34 13 13 GLU GLU A . n A 1 35 LYS 35 14 14 LYS LYS A . n A 1 36 TYR 36 15 15 TYR TYR A . n A 1 37 ILE 37 16 16 ILE ILE A . n A 1 38 ILE 38 17 17 ILE ILE A . n A 1 39 GLU 39 18 18 GLU GLU A . n A 1 40 SER 40 19 19 SER SER A . n A 1 41 ILE 41 20 20 ILE ILE A . n A 1 42 TRP 42 21 21 TRP TRP A . n A 1 43 ASN 43 22 22 ASN ASN A . n A 1 44 GLY 44 23 23 GLY GLY A . n A 1 45 ARG 45 24 24 ARG ARG A . n A 1 46 PHE 46 25 25 PHE PHE A . n A 1 47 PRO 47 26 26 PRO PRO A . n A 1 48 PRO 48 27 27 PRO PRO A . n A 1 49 GLY 49 28 28 GLY GLY A . n A 1 50 SER 50 29 29 SER SER A . n A 1 51 ILE 51 30 30 ILE ILE A . n A 1 52 LEU 52 31 31 LEU LEU A . n A 1 53 PRO 53 32 32 PRO PRO A . n A 1 54 ALA 54 33 33 ALA ALA A . n A 1 55 GLU 55 34 34 GLU GLU A . n A 1 56 ARG 56 35 35 ARG ARG A . n A 1 57 GLU 57 36 36 GLU GLU A . n A 1 58 LEU 58 37 37 LEU LEU A . n A 1 59 SER 59 38 38 SER SER A . n A 1 60 GLU 60 39 39 GLU GLU A . n A 1 61 LEU 61 40 40 LEU LEU A . n A 1 62 ILE 62 41 41 ILE ILE A . n A 1 63 GLY 63 42 42 GLY GLY A . n A 1 64 VAL 64 43 43 VAL VAL A . n A 1 65 THR 65 44 44 THR THR A . n A 1 66 ARG 66 45 45 ARG ARG A . n A 1 67 THR 67 46 46 THR THR A . n A 1 68 THR 68 47 47 THR THR A . n A 1 69 LEU 69 48 48 LEU LEU A . n A 1 70 ARG 70 49 49 ARG ARG A . n A 1 71 GLU 71 50 50 GLU GLU A . n A 1 72 VAL 72 51 51 VAL VAL A . n A 1 73 LEU 73 52 52 LEU LEU A . n A 1 74 GLN 74 53 53 GLN GLN A . n A 1 75 ARG 75 54 54 ARG ARG A . n A 1 76 LEU 76 55 55 LEU LEU A . n A 1 77 ALA 77 56 56 ALA ALA A . n A 1 78 ARG 78 57 57 ARG ARG A . n A 1 79 ASP 79 58 58 ASP ASP A . n A 1 80 GLY 80 59 59 GLY GLY A . n A 1 81 TRP 81 60 60 TRP TRP A . n A 1 82 LEU 82 61 61 LEU LEU A . n A 1 83 THR 83 62 62 THR THR A . n A 1 84 ILE 84 63 63 ILE ILE A . n A 1 85 GLN 85 64 64 GLN GLN A . n A 1 86 HIS 86 65 65 HIS HIS A . n A 1 87 GLY 87 66 66 GLY GLY A . n A 1 88 LYS 88 67 67 LYS LYS A . n A 1 89 PRO 89 68 68 PRO PRO A . n A 1 90 THR 90 69 69 THR THR A . n A 1 91 LYS 91 70 70 LYS LYS A . n A 1 92 VAL 92 71 71 VAL VAL A . n A 1 93 ASN 93 72 72 ASN ASN A . n A 1 94 GLN 94 73 73 GLN GLN A . n A 1 95 PHE 95 74 74 PHE PHE A . n A 1 96 MET 96 75 75 MET MET A . n A 1 97 GLU 97 76 76 GLU GLU A . n A 1 98 THR 98 77 77 THR THR A . n A 1 99 SER 99 78 78 SER SER A . n A 1 100 GLY 100 79 79 GLY GLY A . n A 1 101 LEU 101 80 80 LEU LEU A . n A 1 102 HIS 102 81 81 HIS HIS A . n A 1 103 ILE 103 82 82 ILE ILE A . n A 1 104 LEU 104 83 83 LEU LEU A . n A 1 105 ASP 105 84 84 ASP ASP A . n A 1 106 THR 106 85 85 THR THR A . n A 1 107 LEU 107 86 86 LEU LEU A . n A 1 108 MET 108 87 87 MET MET A . n A 1 109 THR 109 88 88 THR THR A . n A 1 110 LEU 110 89 89 LEU LEU A . n A 1 111 ASP 111 90 90 ASP ASP A . n A 1 112 VAL 112 91 91 VAL VAL A . n A 1 113 ASP 113 92 92 ASP ASP A . n A 1 114 ASN 114 93 93 ASN ASN A . n A 1 115 ALA 115 94 94 ALA ALA A . n A 1 116 THR 116 95 95 THR THR A . n A 1 117 ASN 117 96 96 ASN ASN A . n A 1 118 ILE 118 97 97 ILE ILE A . n A 1 119 VAL 119 98 98 VAL VAL A . n A 1 120 GLU 120 99 99 GLU GLU A . n A 1 121 ASP 121 100 100 ASP ASP A . n A 1 122 LEU 122 101 101 LEU LEU A . n A 1 123 LEU 123 102 102 LEU LEU A . n A 1 124 ALA 124 103 103 ALA ALA A . n A 1 125 ALA 125 104 104 ALA ALA A . n A 1 126 ARG 126 105 105 ARG ARG A . n A 1 127 THR 127 106 106 THR THR A . n A 1 128 ASN 128 107 107 ASN ASN A . n A 1 129 ILE 129 108 108 ILE ILE A . n A 1 130 SER 130 109 109 SER SER A . n A 1 131 PRO 131 110 110 PRO PRO A . n A 1 132 ILE 132 111 111 ILE ILE A . n A 1 133 PHE 133 112 112 PHE PHE A . n A 1 134 MET 134 113 113 MET MET A . n A 1 135 ARG 135 114 114 ARG ARG A . n A 1 136 TYR 136 115 115 TYR TYR A . n A 1 137 ALA 137 116 116 ALA ALA A . n A 1 138 PHE 138 117 117 PHE PHE A . n A 1 139 LYS 139 118 118 LYS LYS A . n A 1 140 ALA 140 119 119 ALA ALA A . n A 1 141 ASN 141 120 120 ASN ASN A . n A 1 142 LYS 142 121 121 LYS LYS A . n A 1 143 GLU 143 122 122 GLU GLU A . n A 1 144 ASN 144 123 123 ASN ASN A . n A 1 145 SER 145 124 124 SER SER A . n A 1 146 GLU 146 125 125 GLU GLU A . n A 1 147 ARG 147 126 126 ARG ARG A . n A 1 148 THR 148 127 127 THR THR A . n A 1 149 ILE 149 128 128 ILE ILE A . n A 1 150 LYS 150 129 129 LYS LYS A . n A 1 151 ASN 151 130 130 ASN ASN A . n A 1 152 VAL 152 131 131 VAL VAL A . n A 1 153 ILE 153 132 132 ILE ILE A . n A 1 154 GLU 154 133 133 GLU GLU A . n A 1 155 SER 155 134 134 SER SER A . n A 1 156 CYS 156 135 135 CYS CYS A . n A 1 157 GLU 157 136 136 GLU GLU A . n A 1 158 ALA 158 137 137 ALA ALA A . n A 1 159 LEU 159 138 138 LEU LEU A . n A 1 160 MET 160 139 139 MET MET A . n A 1 161 ASN 161 140 140 ASN ASN A . n A 1 162 ALA 162 141 141 ALA ALA A . n A 1 163 ALA 163 142 142 ALA ALA A . n A 1 164 SER 164 143 143 SER SER A . n A 1 165 TRP 165 144 144 TRP TRP A . n A 1 166 ASP 166 145 145 ASP ASP A . n A 1 167 ASP 167 146 146 ASP ASP A . n A 1 168 PHE 168 147 147 PHE PHE A . n A 1 169 ILE 169 148 148 ILE ILE A . n A 1 170 ALA 170 149 149 ALA ALA A . n A 1 171 SER 171 150 150 SER SER A . n A 1 172 SER 172 151 151 SER SER A . n A 1 173 PRO 173 152 152 PRO PRO A . n A 1 174 TYR 174 153 153 TYR TYR A . n A 1 175 ALA 175 154 154 ALA ALA A . n A 1 176 GLU 176 155 155 GLU GLU A . n A 1 177 LYS 177 156 156 LYS LYS A . n A 1 178 VAL 178 157 157 VAL VAL A . n A 1 179 LEU 179 158 158 LEU LEU A . n A 1 180 GLN 180 159 159 GLN GLN A . n A 1 181 ASN 181 160 160 ASN ASN A . n A 1 182 VAL 182 161 161 VAL VAL A . n A 1 183 LYS 183 162 162 LYS LYS A . n A 1 184 GLU 184 163 163 GLU GLU A . n A 1 185 ASP 185 164 164 ASP ASP A . n A 1 186 ASN 186 165 165 ASN ASN A . n A 1 187 GLU 187 166 166 GLU GLU A . n A 1 188 LYS 188 167 167 LYS LYS A . n A 1 189 ASP 189 168 168 ASP ASP A . n A 1 190 GLU 190 169 169 GLU GLU A . n A 1 191 ALA 191 170 170 ALA ALA A . n A 1 192 LYS 192 171 171 LYS LYS A . n A 1 193 ARG 193 172 172 ARG ARG A . n A 1 194 GLN 194 173 173 GLN GLN A . n A 1 195 GLU 195 174 174 GLU GLU A . n A 1 196 ILE 196 175 175 ILE ILE A . n A 1 197 LEU 197 176 176 LEU LEU A . n A 1 198 ILE 198 177 177 ILE ILE A . n A 1 199 ALA 199 178 178 ALA ALA A . n A 1 200 LYS 200 179 179 LYS LYS A . n A 1 201 THR 201 180 180 THR THR A . n A 1 202 PHE 202 181 181 PHE PHE A . n A 1 203 ASN 203 182 182 ASN ASN A . n A 1 204 PHE 204 183 183 PHE PHE A . n A 1 205 TYR 205 184 184 TYR TYR A . n A 1 206 ASP 206 185 185 ASP ASP A . n A 1 207 TYR 207 186 186 TYR TYR A . n A 1 208 MET 208 187 187 MET MET A . n A 1 209 LEU 209 188 188 LEU LEU A . n A 1 210 PHE 210 189 189 PHE PHE A . n A 1 211 GLN 211 190 190 GLN GLN A . n A 1 212 ARG 212 191 191 ARG ARG A . n A 1 213 LEU 213 192 192 LEU LEU A . n A 1 214 ALA 214 193 193 ALA ALA A . n A 1 215 PHE 215 194 194 PHE PHE A . n A 1 216 HIS 216 195 195 HIS HIS A . n A 1 217 SER 217 196 196 SER SER A . n A 1 218 GLY 218 197 197 GLY GLY A . n A 1 219 ASN 219 198 198 ASN ASN A . n A 1 220 GLN 220 199 199 GLN GLN A . n A 1 221 ILE 221 200 200 ILE ILE A . n A 1 222 TYR 222 201 201 TYR TYR A . n A 1 223 GLY 223 202 202 GLY GLY A . n A 1 224 LEU 224 203 203 LEU LEU A . n A 1 225 ILE 225 204 204 ILE ILE A . n A 1 226 PHE 226 205 205 PHE PHE A . n A 1 227 ASN 227 206 206 ASN ASN A . n A 1 228 GLY 228 207 207 GLY GLY A . n A 1 229 LEU 229 208 208 LEU LEU A . n A 1 230 LYS 230 209 209 LYS LYS A . n A 1 231 LYS 231 210 210 LYS LYS A . n A 1 232 LEU 232 211 211 LEU LEU A . n A 1 233 TYR 233 212 212 TYR TYR A . n A 1 234 ASP 234 213 213 ASP ASP A . n A 1 235 ARG 235 214 214 ARG ARG A . n A 1 236 VAL 236 215 215 VAL VAL A . n A 1 237 GLY 237 216 216 GLY GLY A . n A 1 238 SER 238 217 217 SER SER A . n A 1 239 TYR 239 218 218 TYR TYR A . n A 1 240 TYR 240 219 219 TYR TYR A . n A 1 241 PHE 241 220 220 PHE PHE A . n A 1 242 SER 242 221 221 SER SER A . n A 1 243 ASN 243 222 222 ASN ASN A . n A 1 244 PRO 244 223 223 PRO PRO A . n A 1 245 ALA 245 224 224 ALA ALA A . n A 1 246 SER 246 225 225 SER SER A . n A 1 247 ARG 247 226 226 ARG ARG A . n A 1 248 GLU 248 227 227 GLU GLU A . n A 1 249 LEU 249 228 228 LEU LEU A . n A 1 250 ALA 250 229 229 ALA ALA A . n A 1 251 LEU 251 230 230 LEU LEU A . n A 1 252 LYS 252 231 231 LYS LYS A . n A 1 253 PHE 253 232 232 PHE PHE A . n A 1 254 TYR 254 233 233 TYR TYR A . n A 1 255 HIS 255 234 234 HIS HIS A . n A 1 256 GLN 256 235 235 GLN GLN A . n A 1 257 LEU 257 236 236 LEU LEU A . n A 1 258 LEU 258 237 237 LEU LEU A . n A 1 259 GLU 259 238 238 GLU GLU A . n A 1 260 THR 260 239 239 THR THR A . n A 1 261 CYS 261 240 240 CYS CYS A . n A 1 262 GLU 262 241 241 GLU GLU A . n A 1 263 SER 263 242 242 SER SER A . n A 1 264 GLY 264 243 243 GLY GLY A . n A 1 265 GLN 265 244 244 GLN GLN A . n A 1 266 ARG 266 245 245 ARG ARG A . n A 1 267 GLU 267 246 246 GLU GLU A . n A 1 268 GLN 268 247 247 GLN GLN A . n A 1 269 LEU 269 248 248 LEU LEU A . n A 1 270 PRO 270 249 249 PRO PRO A . n A 1 271 VAL 271 250 250 VAL VAL A . n A 1 272 VAL 272 251 251 VAL VAL A . n A 1 273 ILE 273 252 252 ILE ILE A . n A 1 274 ARG 274 253 253 ARG ARG A . n A 1 275 HIS 275 254 254 HIS HIS A . n A 1 276 TYR 276 255 255 TYR TYR A . n A 1 277 GLY 277 256 256 GLY GLY A . n A 1 278 MET 278 257 257 MET MET A . n A 1 279 GLU 279 258 258 GLU GLU A . n A 1 280 SER 280 259 259 SER SER A . n A 1 281 ALA 281 260 260 ALA ALA A . n A 1 282 LEU 282 261 261 LEU LEU A . n A 1 283 ILE 283 262 262 ILE ILE A . n A 1 284 TRP 284 263 263 TRP TRP A . n A 1 285 ASN 285 264 264 ASN ASN A . n A 1 286 GLU 286 265 265 GLU GLU A . n A 1 287 MET 287 266 266 MET MET A . n A 1 288 LYS 288 267 267 LYS LYS A . n A 1 289 LYS 289 268 268 LYS LYS A . n A 1 290 GLN 290 269 269 GLN GLN A . n A 1 291 LEU 291 270 270 LEU LEU A . n A 1 292 PRO 292 271 271 PRO PRO A . n A 1 293 THR 293 272 272 THR THR A . n A 1 294 ASN 294 273 273 ASN ASN A . n A 1 295 PHE 295 274 274 PHE PHE A . n A 1 296 THR 296 275 275 THR THR A . n A 1 297 GLU 297 276 276 GLU GLU A . n A 1 298 ASP 298 277 277 ASP ASP A . n A 1 299 ASP 299 278 278 ASP ASP A . n A 1 300 SER 300 279 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 301 1 NI NI A . C 3 HOH 1 401 69 HOH HOH A . C 3 HOH 2 402 72 HOH HOH A . C 3 HOH 3 403 65 HOH HOH A . C 3 HOH 4 404 53 HOH HOH A . C 3 HOH 5 405 80 HOH HOH A . C 3 HOH 6 406 11 HOH HOH A . C 3 HOH 7 407 43 HOH HOH A . C 3 HOH 8 408 6 HOH HOH A . C 3 HOH 9 409 83 HOH HOH A . C 3 HOH 10 410 89 HOH HOH A . C 3 HOH 11 411 18 HOH HOH A . C 3 HOH 12 412 101 HOH HOH A . C 3 HOH 13 413 28 HOH HOH A . C 3 HOH 14 414 9 HOH HOH A . C 3 HOH 15 415 98 HOH HOH A . C 3 HOH 16 416 66 HOH HOH A . C 3 HOH 17 417 35 HOH HOH A . C 3 HOH 18 418 81 HOH HOH A . C 3 HOH 19 419 61 HOH HOH A . C 3 HOH 20 420 32 HOH HOH A . C 3 HOH 21 421 16 HOH HOH A . C 3 HOH 22 422 87 HOH HOH A . C 3 HOH 23 423 4 HOH HOH A . C 3 HOH 24 424 23 HOH HOH A . C 3 HOH 25 425 7 HOH HOH A . C 3 HOH 26 426 14 HOH HOH A . C 3 HOH 27 427 56 HOH HOH A . C 3 HOH 28 428 85 HOH HOH A . C 3 HOH 29 429 12 HOH HOH A . C 3 HOH 30 430 86 HOH HOH A . C 3 HOH 31 431 93 HOH HOH A . C 3 HOH 32 432 3 HOH HOH A . C 3 HOH 33 433 38 HOH HOH A . C 3 HOH 34 434 37 HOH HOH A . C 3 HOH 35 435 59 HOH HOH A . C 3 HOH 36 436 15 HOH HOH A . C 3 HOH 37 437 88 HOH HOH A . C 3 HOH 38 438 21 HOH HOH A . C 3 HOH 39 439 58 HOH HOH A . C 3 HOH 40 440 10 HOH HOH A . C 3 HOH 41 441 17 HOH HOH A . C 3 HOH 42 442 2 HOH HOH A . C 3 HOH 43 443 57 HOH HOH A . C 3 HOH 44 444 36 HOH HOH A . C 3 HOH 45 445 13 HOH HOH A . C 3 HOH 46 446 46 HOH HOH A . C 3 HOH 47 447 1 HOH HOH A . C 3 HOH 48 448 8 HOH HOH A . C 3 HOH 49 449 91 HOH HOH A . C 3 HOH 50 450 49 HOH HOH A . C 3 HOH 51 451 60 HOH HOH A . C 3 HOH 52 452 39 HOH HOH A . C 3 HOH 53 453 26 HOH HOH A . C 3 HOH 54 454 94 HOH HOH A . C 3 HOH 55 455 79 HOH HOH A . C 3 HOH 56 456 34 HOH HOH A . C 3 HOH 57 457 27 HOH HOH A . C 3 HOH 58 458 19 HOH HOH A . C 3 HOH 59 459 97 HOH HOH A . C 3 HOH 60 460 70 HOH HOH A . C 3 HOH 61 461 68 HOH HOH A . C 3 HOH 62 462 64 HOH HOH A . C 3 HOH 63 463 44 HOH HOH A . C 3 HOH 64 464 100 HOH HOH A . C 3 HOH 65 465 45 HOH HOH A . C 3 HOH 66 466 95 HOH HOH A . C 3 HOH 67 467 25 HOH HOH A . C 3 HOH 68 468 33 HOH HOH A . C 3 HOH 69 469 52 HOH HOH A . C 3 HOH 70 470 74 HOH HOH A . C 3 HOH 71 471 30 HOH HOH A . C 3 HOH 72 472 24 HOH HOH A . C 3 HOH 73 473 75 HOH HOH A . C 3 HOH 74 474 71 HOH HOH A . C 3 HOH 75 475 54 HOH HOH A . C 3 HOH 76 476 47 HOH HOH A . C 3 HOH 77 477 96 HOH HOH A . C 3 HOH 78 478 62 HOH HOH A . C 3 HOH 79 479 63 HOH HOH A . C 3 HOH 80 480 5 HOH HOH A . C 3 HOH 81 481 22 HOH HOH A . C 3 HOH 82 482 84 HOH HOH A . C 3 HOH 83 483 77 HOH HOH A . C 3 HOH 84 484 51 HOH HOH A . C 3 HOH 85 485 42 HOH HOH A . C 3 HOH 86 486 67 HOH HOH A . C 3 HOH 87 487 78 HOH HOH A . C 3 HOH 88 488 99 HOH HOH A . C 3 HOH 89 489 82 HOH HOH A . C 3 HOH 90 490 31 HOH HOH A . C 3 HOH 91 491 92 HOH HOH A . C 3 HOH 92 492 50 HOH HOH A . C 3 HOH 93 493 41 HOH HOH A . C 3 HOH 94 494 29 HOH HOH A . C 3 HOH 95 495 76 HOH HOH A . C 3 HOH 96 496 20 HOH HOH A . C 3 HOH 97 497 73 HOH HOH A . C 3 HOH 98 498 40 HOH HOH A . C 3 HOH 99 499 90 HOH HOH A . C 3 HOH 100 500 48 HOH HOH A . C 3 HOH 101 501 55 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3410 ? 1 MORE -27 ? 1 'SSA (A^2)' 26620 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 121 ? A ASP 100 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 418 ? 1_555 73.2 ? 2 OD1 ? A ASP 121 ? A ASP 100 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 426 ? 1_555 75.0 ? 3 O ? C HOH . ? A HOH 418 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 426 ? 1_555 78.3 ? 4 OD1 ? A ASP 121 ? A ASP 100 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? A GLY 218 ? A GLY 197 ? 1_555 37.7 ? 5 O ? C HOH . ? A HOH 418 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? A GLY 218 ? A GLY 197 ? 1_555 89.6 ? 6 O ? C HOH . ? A HOH 426 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? A GLY 218 ? A GLY 197 ? 1_555 111.6 ? 7 OD1 ? A ASP 121 ? A ASP 100 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 480 ? 7_555 177.0 ? 8 O ? C HOH . ? A HOH 418 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 480 ? 7_555 107.4 ? 9 O ? C HOH . ? A HOH 426 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 480 ? 7_555 102.2 ? 10 O ? A GLY 218 ? A GLY 197 ? 1_555 NI ? B NI . ? A NI 301 ? 1_555 O ? C HOH . ? A HOH 480 ? 7_555 144.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-05 2 'Structure model' 1 1 2017-05-31 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 0.1536 15.5063 6.7146 1.9648 ? -0.5359 ? -0.7036 ? 0.6906 ? 0.1782 ? 1.9030 ? 0.1490 ? 0.1690 ? 0.3198 ? 0.6469 ? -0.1642 ? 1.7257 ? -0.6377 ? -0.0002 ? 1.8073 ? 0.3164 ? -0.5218 ? -0.2173 ? -1.7497 ? 1.1822 ? 0.5425 ? 2 'X-RAY DIFFRACTION' ? refined -7.8756 6.7866 4.6996 0.7859 ? -0.1238 ? -0.2118 ? 0.3499 ? 0.0068 ? 0.8890 ? 4.2449 ? -1.6250 ? 1.5479 ? 2.7411 ? -1.6462 ? 1.0784 ? -0.6894 ? -0.1150 ? 1.4579 ? 0.7770 ? -0.1556 ? -0.0512 ? -1.5610 ? 0.5105 ? 0.0917 ? 3 'X-RAY DIFFRACTION' ? refined -2.8993 -19.6237 12.6720 0.1984 ? 0.0458 ? -0.0636 ? 0.4353 ? -0.0136 ? 0.2377 ? 3.0116 ? -0.7464 ? 0.6884 ? 1.8710 ? -1.0991 ? 4.0100 ? -0.0857 ? -0.3783 ? 0.0509 ? 0.2145 ? 0.1073 ? -0.2100 ? 0.1464 ? 0.6478 ? -0.0615 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 9 through 57 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 58 through 93 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 94 through 278 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.4_1496 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 22 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 401 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A PHE 25 ? ? N A PRO 26 ? ? CA A PRO 26 ? ? 132.86 119.30 13.56 1.50 Y 2 1 C A PHE 25 ? ? N A PRO 26 ? ? CD A PRO 26 ? ? 115.28 128.40 -13.12 2.10 Y 3 1 CA A LEU 31 ? ? CB A LEU 31 ? ? CG A LEU 31 ? ? 129.36 115.30 14.06 2.30 N 4 1 C A LEU 31 ? ? N A PRO 32 ? ? CA A PRO 32 ? ? 134.92 119.30 15.62 1.50 Y 5 1 C A LEU 31 ? ? N A PRO 32 ? ? CD A PRO 32 ? ? 108.99 128.40 -19.41 2.10 Y 6 1 CB A ARG 54 ? ? CG A ARG 54 ? ? CD A ARG 54 ? ? 95.69 111.60 -15.91 2.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 26 ? ? -48.28 158.67 2 1 PRO A 27 ? ? -55.63 -77.59 3 1 SER A 29 ? ? -150.34 -156.31 4 1 PRO A 32 ? ? -66.35 -152.77 5 1 GLU A 34 ? ? -27.20 -65.82 6 1 THR A 44 ? ? -28.46 168.27 7 1 ARG A 45 ? ? -76.08 -131.02 8 1 THR A 46 ? ? -60.54 18.55 9 1 HIS A 65 ? ? -38.41 133.66 10 1 PRO A 68 ? ? -72.27 -152.16 11 1 PHE A 74 ? ? -51.41 104.49 12 1 ASP A 90 ? ? 70.37 140.13 13 1 VAL A 161 ? ? -103.03 53.20 14 1 GLU A 163 ? ? -156.68 -25.66 15 1 ASP A 164 ? ? -59.90 51.04 16 1 THR A 275 ? ? -111.39 75.18 17 1 ASP A 277 ? ? -59.25 -174.55 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 TYR A 15 ? ? ILE A 16 ? ? 146.89 2 1 LEU A 31 ? ? PRO A 32 ? ? -128.55 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -20 ? A MET 1 2 1 Y 1 A GLY -19 ? A GLY 2 3 1 Y 1 A SER -18 ? A SER 3 4 1 Y 1 A SER -17 ? A SER 4 5 1 Y 1 A HIS -16 ? A HIS 5 6 1 Y 1 A HIS -15 ? A HIS 6 7 1 Y 1 A HIS -14 ? A HIS 7 8 1 Y 1 A HIS -13 ? A HIS 8 9 1 Y 1 A HIS -12 ? A HIS 9 10 1 Y 1 A HIS -11 ? A HIS 10 11 1 Y 1 A SER -10 ? A SER 11 12 1 Y 1 A SER -9 ? A SER 12 13 1 Y 1 A GLY -8 ? A GLY 13 14 1 Y 1 A LEU -7 ? A LEU 14 15 1 Y 1 A VAL -6 ? A VAL 15 16 1 Y 1 A PRO -5 ? A PRO 16 17 1 Y 1 A ARG -4 ? A ARG 17 18 1 Y 1 A GLY -3 ? A GLY 18 19 1 Y 1 A SER -2 ? A SER 19 20 1 Y 1 A HIS -1 ? A HIS 20 21 1 Y 1 A MET 0 ? A MET 21 22 1 Y 1 A MET 1 ? A MET 22 23 1 Y 1 A VAL 2 ? A VAL 23 24 1 Y 1 A ILE 3 ? A ILE 24 25 1 Y 1 A LYS 4 ? A LYS 25 26 1 Y 1 A ALA 5 ? A ALA 26 27 1 Y 1 A LYS 6 ? A LYS 27 28 1 Y 1 A SER 7 ? A SER 28 29 1 Y 1 A SER 279 ? A SER 300 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 water HOH #